Carg12272 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12272
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	AT4G29520-like protein
Location	Cucurbita_argyrosperma_scaffold_054 : 773959 .. 776531 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGCGTAAAACTCTTCTTCCACCATTGTTGGAATCCTCAATTCAAATTCTCTGAATCTTAAACAGAGAGCTTCGTGAAGAAGATGAATCGATTACTGAGTGTTGTTTTGGTGCTTCTTGCCATTGCTTGGGTTCCGACGTTTGAGTGTTCGAAGAAGCTATCAGCAGCTGCAAGGAGGGAGGACGTTCCGTACATCAAATGCCAGGTCTGCGAGAAGCTTGCTGTGCAGTTGTATCACCAAGTTGAGAAGAAACGAGCTGAGATCGCTCCCAAGAAGGTGATTCTTTATAGCTGATGTTTCATGGATCGGTTTTGGATTCTTTAATTTAGAGATTCAGATTATAATCAACTCCAATCATTTTTTTTCCTGCATTTGAATGTTTTCCCTTTCTTTTGGGGTTCTTGATGTAGATCTCCGAGTATCAAATTATCGAAATAGCTGAGAACGTATGTAATTTGAAGAAGGCAGAAGCTGATTGGATTTTGCAGATTGACATTGTTGAACAAGGGGATAGGCTTGAGGTAAGTGGAACTGAGATGAGACTTTGCTGTTTCAATCTAATGAATTTAGGTATAAAACTTTGGTGACTTGTTACCACTGTTCGGGATTGGCATTTTCAACTTAGAAAATGAATGGAACGGTCCTATGAATCAAAACTAAATTTTCCGTTTACAATCATGATACTCAAAATATGAACGGAAATACCTTTTCTTTTAGTATTTTGCCGACAAGCAACTCAAAATATTAATAATCTTTCCGAGTTATATTGTTTTTATTACTTTATAAACTTCACCTGTAAGCCATAACTCATTGAAGAACTATGTCTTCTTAGCTAGTGGAGCAGAACACCGAAGGACAATGCAATTCAGAGTGCAAGACTATTGAGCGTGCATGTCAAGAGGTATGTATTGTTTTGGCCTTGAGTATGATGTTTATTAACCCTTATTAGCTGAAAGAATAAAAAATTAGTACAGCTTCAGAATCTGGGGAGATAAGAAATGAGAATCTCATTGTATTCATTTATTATTGATGTTTTTATGAAAAAAACCTTGACACAAACTAGTAGGAATAGTCTTCTTACTTCCTTAAGTAGTTTGTTTTTAGTAGATTACAAATCTTAATGAGGTCCACTGATTAGGTAAATGCAATATAAACAGACCAATACAAATAAATCAAGTAAAAGATGAACTAGAAGAAAAAAAAAAAAATTCAAAGAATAGCCAGGAGGAGTTTACTGAATCTGAAGTGGTGTGTTTTGCTAGAATTGCTTTGACTCTGTGATAGAATAGATTCCCCATCGTGGGTTTACCAGAAAGAAAATATAGCAATTTCTTAAATTTGTTCTGTTGCCTTCGCAGGTCATGGGATATTCTGATACTGATGTTGCTGAATACTTGTATAGCTCCAAACCAAAGATTGAATCGTTGATTAACTATCTGTGCAAGGACCTCACTCAATCATGCAGTACTAAGCCGCCTCCAGTTCCTAAGGTAGCAACTAATCACATGCCGGTTTAACTGATCGATGAGATCATCCATCGTTTTTTGGTGTGAGCTAATTGTCATTGTCATTAAAATGTTGGGTTCTGGTACCTAAGGGGACTAACTTGTCCTCTAATTATATGTTTTAGTTAAATTCAAATGGTCTGTTATACATCGGTTATTCGTTAGAGATTAAAATAATTTTGAAATCCAATTTGTTCGATATATCCGTTGGTTAGGTTCGAGATAGTGAATAATTTTAATGATGCTTGTGGATAAAATTTATTTGGGTTCATTTAATAATCATGTTATTAGTTTTGGTTAAAATGTGGTTTTGAGTTTTTGACATTTTAGTGTATTGAGATTCAGTCTTCTATAGTTGATCCTTGTATTGTATTATGATTCAGGACAGGACACCAGGCGAGCCCTTCGTGGCCAAGTCAGCAAAGGAAGCTGAAATGGAAAAGATGTTGAGATCTATGGAGGTAATTAGTTCGTTGTTTTAGTGCTTGTTGGCCAACACTTCCTCAATTTCCAAGCCTCACCCACGCTCTTCACCTAAACCAGGGAATGCCAGGAGCACCCGGCATGAAAATGTATTCAAGAGATGATCTAATGAATATGAAGAATCTCGGAGGTGAAGATGACGATGAAGACGAGGAAGAAGATGATAAATTCCCTTCAAATTTGGTACTTAAAACATCTTTTATATGGCCAGAAGTTCTAGGAATCATAAATGTTCTGCAAAAACTTATTGGGAAAAAAACCTTTTTGTAGGGCAAAGTTTTGAGGGAGAAAGAGAGCAAGAAGAGTGATTGGAAAAACAGGATCACGAAGGGCGTTTCGAAGGCAGGGGAAGCAATAAAAAAGCACGCTTACAGAGTGTCTAACAAAGTAAGGCAATGGTGGAGAGCGAAGTCCAGAGGCTTCAAAAGTTCAAAGCCCGCCGCCAAACAAGAACTGTAAAGTCTCTCAGTAACATTAAAGTTAAATTCGTTGTATTTGCATCGCCCCATTAGGAAGTTAGCTAAGTGAAACTGATAGCAAATACAGAAGAGTTCTTGTTCGAATCAATCAATGTTCTGAAATT

mRNA sequence

GTAGCGTAAAACTCTTCTTCCACCATTGTTGGAATCCTCAATTCAAATTCTCTGAATCTTAAACAGAGAGCTTCGTGAAGAAGATGAATCGATTACTGAGTGTTGTTTTGGTGCTTCTTGCCATTGCTTGGGTTCCGACGTTTGAGTGTTCGAAGAAGCTATCAGCAGCTGCAAGGAGGGAGGACGTTCCGTACATCAAATGCCAGGTCTGCGAGAAGCTTGCTGTGCAGTTGTATCACCAAGTTGAGAAGAAACGAGCTGAGATCGCTCCCAAGAAGATCTCCGAGTATCAAATTATCGAAATAGCTGAGAACGTATGTAATTTGAAGAAGGCAGAAGCTGATTGGATTTTGCAGATTGACATTGTTGAACAAGGGGATAGGCTTGAGCTAGTGGAGCAGAACACCGAAGGACAATGCAATTCAGAGTGCAAGACTATTGAGCGTGCATGTCAAGAGGTCATGGGATATTCTGATACTGATGTTGCTGAATACTTGTATAGCTCCAAACCAAAGATTGAATCGTTGATTAACTATCTGTGCAAGGACCTCACTCAATCATGCAGTACTAAGCCGCCTCCAGTTCCTAAGGTAGCAACTAATCACATGCCGGACAGGACACCAGGCGAGCCCTTCGTGGCCAAGTCAGCAAAGGAAGCTGAAATGGAAAAGATGTTGAGATCTATGGAGGGAATGCCAGGAGCACCCGGCATGAAAATGTATTCAAGAGATGATCTAATGAATATGAAGAATCTCGGAGGTGAAGATGACGATGAAGACGAGGAAGAAGATGATAAATTCCCTTCAAATTTGGGCAAAGTTTTGAGGGAGAAAGAGAGCAAGAAGAGTGATTGGAAAAACAGGATCACGAAGGGCGTTTCGAAGGCAGGGGAAGCAATAAAAAAGCACGCTTACAGAGTGTCTAACAAAGTAAGGCAATGGTGGAGAGCGAAGTCCAGAGGCTTCAAAAGTTCAAAGCCCGCCGCCAAACAAGAACTGTAAAGTCTCTCAGTAACATTAAAGTTAAATTCGTTGTATTTGCATCGCCCCATTAGGAAGTTAGCTAAGTGAAACTGATAGCAAATACAGAAGAGTTCTTGTTCGAATCAATCAATGTTCTGAAATT

Coding sequence (CDS)

ATGAATCGATTACTGAGTGTTGTTTTGGTGCTTCTTGCCATTGCTTGGGTTCCGACGTTTGAGTGTTCGAAGAAGCTATCAGCAGCTGCAAGGAGGGAGGACGTTCCGTACATCAAATGCCAGGTCTGCGAGAAGCTTGCTGTGCAGTTGTATCACCAAGTTGAGAAGAAACGAGCTGAGATCGCTCCCAAGAAGATCTCCGAGTATCAAATTATCGAAATAGCTGAGAACGTATGTAATTTGAAGAAGGCAGAAGCTGATTGGATTTTGCAGATTGACATTGTTGAACAAGGGGATAGGCTTGAGCTAGTGGAGCAGAACACCGAAGGACAATGCAATTCAGAGTGCAAGACTATTGAGCGTGCATGTCAAGAGGTCATGGGATATTCTGATACTGATGTTGCTGAATACTTGTATAGCTCCAAACCAAAGATTGAATCGTTGATTAACTATCTGTGCAAGGACCTCACTCAATCATGCAGTACTAAGCCGCCTCCAGTTCCTAAGGTAGCAACTAATCACATGCCGGACAGGACACCAGGCGAGCCCTTCGTGGCCAAGTCAGCAAAGGAAGCTGAAATGGAAAAGATGTTGAGATCTATGGAGGGAATGCCAGGAGCACCCGGCATGAAAATGTATTCAAGAGATGATCTAATGAATATGAAGAATCTCGGAGGTGAAGATGACGATGAAGACGAGGAAGAAGATGATAAATTCCCTTCAAATTTGGGCAAAGTTTTGAGGGAGAAAGAGAGCAAGAAGAGTGATTGGAAAAACAGGATCACGAAGGGCGTTTCGAAGGCAGGGGAAGCAATAAAAAAGCACGCTTACAGAGTGTCTAACAAAGTAAGGCAATGGTGGAGAGCGAAGTCCAGAGGCTTCAAAAGTTCAAAGCCCGCCGCCAAACAAGAACTGTAA

Protein sequence

MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAEIAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIERACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTPGEPFVAKSAKEAEMEKMLRSMEGMPGAPGMKMYSRDDLMNMKNLGGEDDDEDEEEDDKFPSNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPAAKQEL

Homology

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BLAST of Carg12272 vs. NCBI nr
Match: XP_022934007.1 (uncharacterized protein LOC111441240 [Cucurbita moschata])

HSP 1 Score: 488.0 bits (1255), Expect = 2.3e-134
Identity = 297/305 (97.38%), Postives = 297/305 (97.38%), Query Frame = 0


Query: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60
           MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE
Sbjct: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60

Query: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120
           IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE
Sbjct: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120

Query: 121 RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTP 180
           RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPK       DRTP
Sbjct: 121 RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPK-------DRTP 180

Query: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNLXXXXXXXXXXXXXXFP 240
           GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNLXXXXXXXXXXXXXXFP
Sbjct: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNLXXXXXXXXXXXXXXFP 240

Query: 241 SNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPA 300
           SNLGKVLREKES KSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPA
Sbjct: 241 SNLGKVLREKES-KSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPA 297

Query: 301 AKQEL 306
           AKQEL
Sbjct: 301 AKQEL 297

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BLAST of Carg12272 vs. NCBI nr
Match: XP_023531313.1 (uncharacterized protein LOC111793593 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 486.1 bits (1250), Expect = 8.7e-134
Identity = 295/306 (96.41%), Postives = 295/306 (96.41%), Query Frame = 0


Query: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60
           MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE
Sbjct: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60

Query: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120
           IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE
Sbjct: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120

Query: 121 RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTP 180
           RACQEVMGYSDTDVAEYLYSSKP IESLINYLCKDLTQSCSTKPPPVPK       DRTP
Sbjct: 121 RACQEVMGYSDTDVAEYLYSSKPNIESLINYLCKDLTQSCSTKPPPVPK-------DRTP 180

Query: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNL-XXXXXXXXXXXXXXF 240
           GEPFVAKSXXXXXXXXXXXXXXXXXXXXXX MYSRDDLMNMKN  XXXXXXXXXXXXXXF
Sbjct: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXKMYSRDDLMNMKNFXXXXXXXXXXXXXXXF 240

Query: 241 PSNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKP 300
           PSNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKP
Sbjct: 241 PSNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKP 299

Query: 301 AAKQEL 306
           AAKQEL
Sbjct: 301 AAKQEL 299

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BLAST of Carg12272 vs. NCBI nr
Match: XP_023007307.1 (uncharacterized protein LOC111499839 [Cucurbita maxima])

HSP 1 Score: 481.9 bits (1239), Expect = 1.6e-132
Identity = 288/305 (94.43%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60
           MNRLLS+VLVLLAIAWVPTFECSKKLS AARREDVPYIKCQVCEKLAVQLYHQVEKKRAE
Sbjct: 1   MNRLLSIVLVLLAIAWVPTFECSKKLSTAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60

Query: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120
           IAPKKISEYQIIEIAENVC LKKAEADWILQIDIVEQ DRLELVEQNTEGQCNSECKTIE
Sbjct: 61  IAPKKISEYQIIEIAENVCTLKKAEADWILQIDIVEQEDRLELVEQNTEGQCNSECKTIE 120

Query: 121 RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTP 180
           RACQEVMG+SDTDVAEYLYSSKPKIESL+NYLCKDLTQSCSTKPPPVPK       DRTP
Sbjct: 121 RACQEVMGFSDTDVAEYLYSSKPKIESLVNYLCKDLTQSCSTKPPPVPK-------DRTP 180

Query: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNLXXXXXXXXXXXXXXFP 240
           GEPFVAKSXXXXXXXXXXXXXXXXXXXXXX MYSRDDLMNMKN  XXXXXXXXXXXXXFP
Sbjct: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXKMYSRDDLMNMKNFGXXXXXXXXXXXXXFP 240

Query: 241 SNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPA 300
           SNLGKVLREKESKKSDWKNRITKGVSK GEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPA
Sbjct: 241 SNLGKVLREKESKKSDWKNRITKGVSKTGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPA 298

Query: 301 AKQEL 306
           AKQEL
Sbjct: 301 AKQEL 298

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BLAST of Carg12272 vs. NCBI nr
Match: XP_008450829.1 (PREDICTED: uncharacterized protein LOC103492301 [Cucumis melo])

HSP 1 Score: 437.2 bits (1123), Expect = 4.6e-119
Identity = 263/305 (86.23%), Postives = 282/305 (92.46%), Query Frame = 0


Query: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60
           M +L+SVVLV+  I  +PTFECSKK SAAAR+ED+PYIKCQVCEKLA +LYHQVEKK+AE
Sbjct: 1   MKQLVSVVLVIFIIGLIPTFECSKKPSAAARKEDIPYIKCQVCEKLAAELYHQVEKKQAE 60

Query: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120
           IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGD+LELV+QNTEGQCNSECKTIE
Sbjct: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDKLELVDQNTEGQCNSECKTIE 120

Query: 121 RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTP 180
           RACQEVMGYSDTDVAEYLYSSKPKI+SL+NYLCKDLT+SC+TKPPPVPK       DRTP
Sbjct: 121 RACQEVMGYSDTDVAEYLYSSKPKIDSLVNYLCKDLTKSCTTKPPPVPK-------DRTP 180

Query: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNLXXXXXXXXXXXXXXFP 240
           GEPFVAKS XXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKN XXXXXXXXXXXXXXFP
Sbjct: 181 GEPFVAKSSXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNFXXXXXXXXXXXXXXFP 240

Query: 241 SNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPA 300
           SNLGKVLREKE K +DWKNRITKGVSKAGEA+K+HAY+VSNKVR WWRAK+ G KSSKP 
Sbjct: 241 SNLGKVLREKERKNNDWKNRITKGVSKAGEALKQHAYKVSNKVRHWWRAKTGGLKSSKP- 297

Query: 301 AKQEL 306
            KQEL
Sbjct: 301 TKQEL 297

[Close]

BLAST of Carg12272 vs. NCBI nr
Match: XP_023516412.1 (uncharacterized protein LOC111780286 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.3 bits (1118), Expect = 1.8e-118
Identity = 240/305 (78.69%), Postives = 252/305 (82.62%), Query Frame = 0


Query: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60
           M RLLSVVLVLLAIAW P FECSKK SA ARRED+PYIKCQVCEKLA QLYHQVEKK+AE
Sbjct: 1   MKRLLSVVLVLLAIAWFPMFECSKKPSATARREDIPYIKCQVCEKLAAQLYHQVEKKQAE 60

Query: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120
           IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGD+LELVEQNTEGQCNSECKTIE
Sbjct: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDKLELVEQNTEGQCNSECKTIE 120

Query: 121 RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTP 180
           R CQEVMGYSDTDVAEYLYSSKP ++SL+NYLCKDLT+SCSTKPPPVPK       DRTP
Sbjct: 121 RTCQEVMGYSDTDVAEYLYSSKPNLDSLVNYLCKDLTESCSTKPPPVPK-------DRTP 180

Query: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNLXXXXXXXXXXXXXXFP 240
           GEPFVAKS                       MYSRDDLMNMKN    XXXXXXXXXXX  
Sbjct: 181 GEPFVAKSSKEAEMEKMLRSMEGMPGAPSMKMYSRDDLMNMKNFGGEXXXXXXXXXXXXX 240

Query: 241 SNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPA 300
           SNLGKVLREKESKK+DWK +IT+GVSKAG+AIK+HAY VSNK R WWRAK  G KSSKP 
Sbjct: 241 SNLGKVLREKESKKNDWKTKITRGVSKAGDAIKQHAYTVSNKARHWWRAKLGGLKSSKP- 297

Query: 301 AKQEL 306
            KQEL
Sbjct: 301 TKQEL 297

[Close]

BLAST of Carg12272 vs. TAIR10
Match: AT4G29520.1 (LOCATED IN: endoplasmic reticulum, plasma membrane)

HSP 1 Score: 286.6 bits (732), Expect = 1.8e-77
Identity = 184/310 (59.35%), Postives = 222/310 (71.61%), Query Frame = 0


Query: 1   MNR-LLSVVLVLLA-IAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKR 60
           MNR L+++ L LLA  A +P  + +KK S+  R+EDVPYIKCQVCEKL+ +L+  V++K+
Sbjct: 4   MNRVLVALTLALLASSALLPVSDAAKKPSSTPRKEDVPYIKCQVCEKLSSRLHQLVKEKQ 63

Query: 61  AEIAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKT 120
            +I+PKKISEY+IIEIAENVCNLKK EADW+L+IDIVE+GD L LVEQ  EG CNS+CKT
Sbjct: 64  QQISPKKISEYEIIEIAENVCNLKKEEADWMLKIDIVEKGDNLVLVEQQEEGMCNSKCKT 123

Query: 121 IERACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDR 180
           IE ACQ+V+GYSDTDVAEY+Y SKP + SL+N+LCKDLT +CS KPPPVPK       DR
Sbjct: 124 IENACQKVIGYSDTDVAEYIYKSKPDLVSLVNHLCKDLTDACSKKPPPVPK-------DR 183

Query: 181 TPGEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRD---DLMNMKNLXXXXXXXXXXX 240
            PGEPFVAK              XXXXXXXXXX   R+           XXXXXXXXXXX
Sbjct: 184 VPGEPFVAKPSKDAEMDKILRSMXXXXXXXXXXXXXREXXXXXXXXXXXXXXXXXXXXXX 243

Query: 241 XXXFPSNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFK 300
           XXXFP NLGKVL+EKESK  + K  ITK   K GEA+K+HA +VSN+VR+WW+       
Sbjct: 244 XXXFPKNLGKVLKEKESKTEELKKTITKEFKKKGEALKRHAQKVSNRVRRWWKGLGSSSS 303

Query: 301 SSKPAAKQEL 306
               + K EL
Sbjct: 304 KKPKSGKSEL 306

[Close]

BLAST of Carg12272 vs. TrEMBL
Match: tr|A0A1S3BPJ2|A0A1S3BPJ2_CUCME (uncharacterized protein LOC103492301 OS=Cucumis melo OX=3656 GN=LOC103492301 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 3.1e-119
Identity = 263/305 (86.23%), Postives = 282/305 (92.46%), Query Frame = 0


Query: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60
           M +L+SVVLV+  I  +PTFECSKK SAAAR+ED+PYIKCQVCEKLA +LYHQVEKK+AE
Sbjct: 1   MKQLVSVVLVIFIIGLIPTFECSKKPSAAARKEDIPYIKCQVCEKLAAELYHQVEKKQAE 60

Query: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120
           IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGD+LELV+QNTEGQCNSECKTIE
Sbjct: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDKLELVDQNTEGQCNSECKTIE 120

Query: 121 RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTP 180
           RACQEVMGYSDTDVAEYLYSSKPKI+SL+NYLCKDLT+SC+TKPPPVPK       DRTP
Sbjct: 121 RACQEVMGYSDTDVAEYLYSSKPKIDSLVNYLCKDLTKSCTTKPPPVPK-------DRTP 180

Query: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNLXXXXXXXXXXXXXXFP 240
           GEPFVAKS XXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKN XXXXXXXXXXXXXXFP
Sbjct: 181 GEPFVAKSSXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNFXXXXXXXXXXXXXXFP 240

Query: 241 SNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKPA 300
           SNLGKVLREKE K +DWKNRITKGVSKAGEA+K+HAY+VSNKVR WWRAK+ G KSSKP 
Sbjct: 241 SNLGKVLREKERKNNDWKNRITKGVSKAGEALKQHAYKVSNKVRHWWRAKTGGLKSSKP- 297

Query: 301 AKQEL 306
            KQEL
Sbjct: 301 TKQEL 297

[Close]

BLAST of Carg12272 vs. TrEMBL
Match: tr|A0A0A0LWE2|A0A0A0LWE2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G586770 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 3.7e-117
Identity = 260/306 (84.97%), Postives = 279/306 (91.18%), Query Frame = 0


Query: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60
           M +L+ VVLV+  I  +PTFECSKK SAAAR+ED+PYIKCQVCEKLA +LYHQVEKK+AE
Sbjct: 1   MKQLVIVVLVIFIIGLIPTFECSKKPSAAARKEDIPYIKCQVCEKLAAELYHQVEKKQAE 60

Query: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120
           IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGD+LELV+QNTEGQCNSECKTIE
Sbjct: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDKLELVDQNTEGQCNSECKTIE 120

Query: 121 RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTP 180
           RACQEVMGYSDTDVAEYLYSSKPKI+SL+NYLCKDLT+SC+TKPPPVPK       DRTP
Sbjct: 121 RACQEVMGYSDTDVAEYLYSSKPKIDSLVNYLCKDLTKSCTTKPPPVPK-------DRTP 180

Query: 181 GEPFVAKSXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNL-XXXXXXXXXXXXXXF 240
           GEPFVAKS  XXXXXXXXXXXXXXXXXXXX MYSRDDLMNMKN  XXXXXXXXXXXXXXF
Sbjct: 181 GEPFVAKSSKXXXXXXXXXXXXXXXXXXXXKMYSRDDLMNMKNFGXXXXXXXXXXXXXXF 240

Query: 241 PSNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSKP 300
           PSNLGKVLREKE K +DWKNRITKGVSKAGEA+K+HAY+VSNKVR WWRAK+ G KSSKP
Sbjct: 241 PSNLGKVLREKERKNNDWKNRITKGVSKAGEALKQHAYKVSNKVRHWWRAKTGGLKSSKP 298

Query: 301 AAKQEL 306
             KQEL
Sbjct: 301 -TKQEL 298

[Close]

BLAST of Carg12272 vs. TrEMBL
Match: tr|A0A2P4MLH9|A0A2P4MLH9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37856 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.5e-97
Identity = 214/294 (72.79%), Postives = 245/294 (83.33%), Query Frame = 0


Query: 10  VLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAEIAPKKISEY 69
           +LL  AW+P    SKK+ A+AR+ED+PYIKCQVCEKLA QLYHQV+KK+AEI PKKISEY
Sbjct: 1   MLLVSAWIPVSNGSKKVVASARKEDIPYIKCQVCEKLAAQLYHQVQKKQAEIDPKKISEY 60

Query: 70  QIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIERACQEVMGY 129
           QIIEI ENVCNLKKAEADWIL IDIVEQG++L+LVEQ +EGQCNSECKTIERACQEVMGY
Sbjct: 61  QIIEITENVCNLKKAEADWILLIDIVEQGNKLKLVEQESEGQCNSECKTIERACQEVMGY 120

Query: 130 SDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTPGEPFVAKSX 189
           SDTDVAEYLY+SKP+I+SL+N+LCKDLT++CSTKPPPVPK       DRTPGEPFV KS 
Sbjct: 121 SDTDVAEYLYTSKPQIDSLVNFLCKDLTKACSTKPPPVPK-------DRTPGEPFVPKSS 180

Query: 190 XXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMK-NLXXXXXXXXXXXXXXFPSNLGKVLR 249
                  XXXXXXXXXXXX   MYSRDDLMNM    XXXXXXXXXXXXX FPSNLGKVLR
Sbjct: 181 KEAEMEKXXXXXXXXXXXXSMKMYSRDDLMNMNXXXXXXXXXXXXXXXXHFPSNLGKVLR 240

Query: 250 EKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAK----SRGFKSSK 299
           +KES K DWK +IT G++ A +++KKHAY+VSN+VRQWW+ K    S+  K+SK
Sbjct: 241 QKESTKGDWKQKITTGITHARDSLKKHAYKVSNRVRQWWKGKKTAGSKNLKNSK 287

[Close]

BLAST of Carg12272 vs. TrEMBL
Match: tr|A0A2N9G5T5|A0A2N9G5T5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22433 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.1e-96
Identity = 218/289 (75.43%), Postives = 249/289 (86.16%), Query Frame = 0


Query: 10  VLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAEIAPKKISEY 69
           +LL  AW+P    SKK   +AR+ED+PYIKCQVCEKLA QLYHQV+KK+AEI+PKKISEY
Sbjct: 1   MLLISAWIPVSNGSKKPVMSARKEDIPYIKCQVCEKLAAQLYHQVQKKQAEISPKKISEY 60

Query: 70  QIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIERACQEVMGY 129
           QIIEI ENVCNLKKAEADWILQIDIVEQG++LELVEQ  EG CNSECKTIERACQEVMGY
Sbjct: 61  QIIEITENVCNLKKAEADWILQIDIVEQGNKLELVEQEVEGHCNSECKTIERACQEVMGY 120

Query: 130 SDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTPGEPFVAKSX 189
           SDTDVAEYLY++KP+I+SL+N+LCKDL+++CSTKPPP+PK        RTPGEPFV   X
Sbjct: 121 SDTDVAEYLYTAKPQIDSLVNFLCKDLSKACSTKPPPLPK-------GRTPGEPFVPXXX 180

Query: 190 XXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNLXXXXXXXXXXXXXXFPSNLGKVLRE 249
           XXXXXXXXXXXXXXXXXXXXX MYSRDDLMNM   XXXXXXXXXXXXX FPSNLGKVLR+
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXKMYSRDDLMNMNXXXXXXXXXXXXXXXDFPSNLGKVLRQ 240

Query: 250 KESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSK 299
           KESKK DW+ +IT G+  A +++KKHAY+VSN+VRQWWR K+ G K+ K
Sbjct: 241 KESKKGDWRQKITTGIVNARDSLKKHAYKVSNRVRQWWRKKAAGSKNLK 282

[Close]

BLAST of Carg12272 vs. TrEMBL
Match: tr|W9QS30|W9QS30_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_027246 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.0e-90
Identity = 224/307 (72.96%), Postives = 249/307 (81.11%), Query Frame = 0


Query: 1   MNRLLSVVLVLLAIAWVPTFECSKKLSAAARREDVPYIKCQVCEKLAVQLYHQVEKKRAE 60
           +  +L VV VLLA   +P  EC+KK  + AR+EDVPYIKCQVCEK+A QLYHQV+KK+AE
Sbjct: 4   LKAILVVVSVLLAFTCIPISECTKKPVSGARKEDVPYIKCQVCEKVAAQLYHQVQKKQAE 63

Query: 61  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELVEQNTEGQCNSECKTIE 120
           IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLEL EQ TEGQCNSECKTIE
Sbjct: 64  IAPKKISEYQIIEIAENVCNLKKAEADWILQIDIVEQGDRLELAEQGTEGQCNSECKTIE 123

Query: 121 RACQEVMGYSDTDVAEYLYSSKPKIESLINYLCKDLTQSCSTKPPPVPKVATNHMPDRTP 180
           RACQEVMGYSDTDVAEYLY S+P+I+SL+NYLCKDLT++CSTKPP VPK       +RTP
Sbjct: 124 RACQEVMGYSDTDVAEYLYKSQPQIDSLVNYLCKDLTKACSTKPPLVPK-------NRTP 183

Query: 181 GEPFVAK--SXXXXXXXXXXXXXXXXXXXXXXXMYSRDDLMNMKNLXXXXXXXXXXXXXX 240
           GE FVAK   XXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXX
Sbjct: 184 GEAFVAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243

Query: 241 FPSNLGKVLREKESKKSDWKNRITKGVSKAGEAIKKHAYRVSNKVRQWWRAKSRGFKSSK 300
           FPS LG VLREKES K DWK +ITKG+ K G+ +KKHA +VSN VRQWWR   +   SSK
Sbjct: 244 FPSKLGTVLREKESSKDDWKQKITKGIRKTGDTLKKHADKVSNHVRQWWRRIKK--TSSK 301

Query: 301 PAAKQEL 306
            ++K+EL
Sbjct: 304 KSSKKEL 301

The following BLAST results are available for this feature:

BLAST of Carg12272 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934007.1	2.3e-134	97.38	uncharacterized protein LOC111441240 [Cucurbita moschata]	[more]
XP_023531313.1	8.7e-134	96.41	uncharacterized protein LOC111793593 [Cucurbita pepo subsp. pepo]	[more]
XP_023007307.1	1.6e-132	94.43	uncharacterized protein LOC111499839 [Cucurbita maxima]	[more]
XP_008450829.1	4.6e-119	86.23	PREDICTED: uncharacterized protein LOC103492301 [Cucumis melo]	[more]
XP_023516412.1	1.8e-118	78.69	uncharacterized protein LOC111780286 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12272 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G29520.1	1.8e-77	59.35	LOCATED IN: endoplasmic reticulum, plasma membrane	[more]

BLAST of Carg12272 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg12272 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BPJ2\|A0A1S3BPJ2_CUCME	3.1e-119	86.23	uncharacterized protein LOC103492301 OS=Cucumis melo OX=3656 GN=LOC103492301 PE=...	[more]
tr\|A0A0A0LWE2\|A0A0A0LWE2_CUCSA	3.7e-117	84.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G586770 PE=4 SV=1	[more]
tr\|A0A2P4MLH9\|A0A2P4MLH9_QUESU	2.5e-97	72.79	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37856 PE=4 SV=1	[more]
tr\|A0A2N9G5T5\|A0A2N9G5T5_FAGSY	2.1e-96	75.43	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22433 PE=4 SV=1	[more]
tr\|W9QS30\|W9QS30_9ROSA	3.0e-90	72.96	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_027246 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008139	SaposinB_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12272-RA	Carg12272-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..260
None	No IPR available	PANTHER	PTHR36058	FAMILY NOT NAMED	coord: 5..300
IPR008139	Saposin B type domain	PROSITE	PS50015	SAP_B	coord: 36..164 score: 9.564

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12272	Cla011227	Watermelon (97103) v1	carwmB0036
Carg12272	Csa1G586770	Cucumber (Chinese Long) v2	carcuB0033
Carg12272	MELO3C015448	Melon (DHL92) v3.5.1	carmeB0036
Carg12272	ClCG03G015800	Watermelon (Charleston Gray)	carwcgB0038
Carg12272	CSPI01G27910	Wild cucumber (PI 183967)	carcpiB0035
Carg12272	CmaCh11G006790	Cucurbita maxima (Rimu)	carcmaB0047
Carg12272	CmaCh10G007040	Cucurbita maxima (Rimu)	carcmaB0044
Carg12272	CmoCh10G007300	Cucurbita moschata (Rifu)	carcmoB0047
Carg12272	CmoCh11G006900	Cucurbita moschata (Rifu)	carcmoB0050
Carg12272	Lsi06G002590	Bottle gourd (USVL1VR-Ls)	carlsiB034
Carg12272	Cp4.1LG04g10700	Cucurbita pepo (Zucchini)	carcpeB0054
Carg12272	Cp4.1LG18g03620	Cucurbita pepo (Zucchini)	carcpeB0053
Carg12272	CsGy1G027140	Cucumber (Gy14) v2	carcgybB0033
Carg12272	MELO3C015448.2	Melon (DHL92) v3.6.1	carmedB0037
Carg12272	CsaV3_UNG060480	Cucumber (Chinese Long) v3	carcucB0046
Carg12272	CsaV3_1G040210	Cucumber (Chinese Long) v3	carcucB0035
Carg12272	Bhi02G001587	Wax gourd	carwgoB0044

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12272	Carg13013	Silver-seed gourd	carcarB038

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12272	Silver-seed gourd	carcarB042
Carg12272	Watermelon (97103) v2	carwmbB0032
Carg12272	Watermelon (97103) v2	carwmbB0039
Carg12272	Wax gourd	carwgoB0041