Carg12251 (gene) Silver-seed gourd

Overview
NameCarg12251
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDerlin
LocationCucurbita_argyrosperma_scaffold_054 : 689580 .. 693129 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCTAAGGTTTGTTCGTCTTCAAGCGGTGAAATTCTTTAAAGAAGACTGAGAGATCTCTAGTTCCAAAGCTGCTTCGAGTTTGATTTCTGCTTCTACAATGTCTTCTCCGGCCGAGTAATACTGCCTCTCCATTTCTATTTCCTGTTTGAAACTCAATTTTCGAATTCTGTATTTCGTTTCTCTGCTGTTCGATGCTGCAATTTGATTAGTTTTGATTTTTTTTTCTGATGTTCAATGTCTGCTGTCATGTTTAGTTTGATTTTAATCTGGAACCTGACCATTTTTTTTTTTTCACGATTCAGATATTACAACTCTCTTCCGCCTATAAGTAAGGTGTATGGAACCCTATGCCTTTTGGCGACTACAGCCTTCCAACTTGGCTTGTTAAATCCTAATTTTATTGTGTTGCATTTCGGACTCGTATTCAAGCGTTTTCAGGTATTGACTTGAATTTCCATAGGTGTCAGAATTTATCTGTTCAATTTTTGTTCTTTTTAAACATCTGCTAACTCTTGCTTTCATTAGTGTTTTTATTCTGTTTATCCAACATTCTTCTTGATCATTCTTTATCTTTCCAAGGGGCGTTGAATTTCATACTTATGAGTGGATATGGAATTCTTGGAATTCAATAATTTCCTGGTTGGTTGACTTTTCGGTTATATTCTCGATTGATAATTTTACGGAGGCGATAAATATCAGATAAAACTCAGAATTGGAAACAATGAATGAAGATGGGATTTATTTCGAAATGAATTCCATTATTCGGCTGAGATCAAAATAAATAAATTCTTAGTTAGTGCAAGGAATGTTAAGACTGATCGAGAATATTTTATTAGAAAAGTTATTGATGGGAACATTGGAATCATCTTTAACTTAACTTTTGAGGTAATGGTTCAAGTCTTTGATAGCGACTTTAGCAACTATGTAGTCAATTCTCCTCTTATTAATTAGTACTAATTTTCATTAGTGTGGGTTCCTTTGAACTCCAATAAAGGTTCTTCTTTTTGGTAGGAACTTTTGGCATTGGATAGTTTTGTCATTTTTCTCCATATCGTTTAATTGTGTCTTACTTTTCTAAAATAAGGTCATGGTCTTAAGCCAAAGGGACTTTCCATTTAGGATATCAAGGATTATACGATCTTTTTTAATGTCAAATCTTGTAAGGTAGGGCAATCATCCCATCGGACTGGACACCCTCAATGTTAATCTATCCTTCCGTACTTGTTCTGTATATTTCCGTAGTCTGGAGGTTATAAATCTCTTTAATTTTTGAAGTCCCTATTCCAAACAAGAGGAATAGAATTAGATATAGAACAGTTCAAATAAATTCAAAATGAAAGTTGACCGACAAATCTCTTCATCCTAAACCCGGTGAGGAATAGAAACTTGGTAAAATTTATTGCTCATTTTTAAGTTTTGTATGAAGCCTAATGGCATATTCTTTATCAAACGTCAATTTATGAAGTAAACAGTAAAGATATCTAAAAGCAGTAAAGGGAGATACACAAGAACCAGAGTTTTTACATGAAATCCAATCCAGGAAAATTATGGTAGAAACAAGTTAACTTATGCTATGGATTTTAAATTCTGACGAGAAGAATCTTTGCTCTTAGGGAAATGACACAACTTGTGAGGTTCTAAACGAGGTGTGTCTATTGCTGTTTGAGAATTAATGCTAAAAAGAAAAGAATTAGCAGTTATTGTTTCTTGAATCTCGTCAATATTTGCCTATAGAATCATTGTTTTTAATCTAGGAAGTTGGTCTTTCATATCAAAGGAAGTGGTTTTGAAAAAAATTGAGAGAACAGTATAAGTTTGGCCCCTCTCTCTCGCCTTTTTGTTTTTGTGGTGGAATTACTTGTGTTTATAAATTTAGGTCTAACAGCATCTGATTTTTCAGTGGAAATGACTGCCTCAAGTAAGTCATGAACTAGAACGTTCTTTACATCGAATATTCTTAAATGATGGATGCCTTTCCCTTTGCAGTAATTCTTTAATGTGAATTCCAATATAATCTTTCCATTACTATTATTAATATTTATCGAAGGTCACCTTTATTTTCAGGTATGGAGGCTATTCACAAACTTCTTCTTCCTTGGAAAATTCTCTATCAATTTTGGAATTCGTTTACTAATGATGTAAGTTTTTGTGTGTGATAACTTTTTTTTTTTTTTACATGAACTACTAGCAGTACTTTTTCATGAAGGTGAAGGGTTTGTGTTAAAACTTTCATAAAGGTTTATGATGCACTAATAGTTTTTGTGTTTGTGCCCTCACAGAGCAAGGTATGGTGTCCAACTTGAGAATGGACCATTTCAGAGGCGAACAGCAGACTTTCTATGGATGATGATATTTGGAGCCTTAACATTATTGGTGTGTGAAGATCTTTATTATGTTTTCCTTTAGATTGGCCCTTTTGTATTCTTTCACTTTTTGTTGGAAGCTTAGTTTTTTCGACAAAAAAGGTTTAGATGCAGCGGTTCTTTTCAGTTTTATCTGTTCGTACAAATAGTAGATTTTGCAGATGACACCTAATGGTTAAATTGTTTTATGTCATTTAGAAGTGATAATAATGTTATGAGGGAAAGATGTGTGAAAGGCCACCGGACTTTTGGTTGTTTTTTTCCTTGTTCCAAATTATTTTCATGGAACTTAAATCATTTTCCAACGGCTTTACTCTTTTGTATTTCTGTTCCTCGGGGATTTTTTTGTTTTCCTCATGAAATCCTCCCATCTAAGAGTTTTTACTTGTTGAACCTTTATTTTAGTTTGTGGATTTGTGCATATCAAAATGTATTTACGCTGATTTGTGACAAGCTTTCTTGTTATGGATACTTCCTCTTGTGTAGGTACTTTCTGCTATACCAATCTTCTATTCATCATTCTTAGGGATATCACTTGTGTTTATGCTTCTCTACGTCTGGAGTAGAGAATTTCCTACTGCGCAGATCAACATATATGGCCTTGTGACTCTTAAGGTACGACCAATAGCAATGATTTAGGTTTCAAATTATACCTTTTTTTCACCACGGGATTGTGTTTCTCAGTTCCTAATATCTGCATTACAAATGTAATGCTTTTTGTGCAGGCATTTTATCTGCCATGGGCCATGCTAGCGCTGGATGTCATTTTTGGTTCACCTCTTGTACCTGATTTACTTGGAATCTTAGCAGGGCATTTGTATTACTTCTTGACCGTGTTACATCCTCTGGCAGGCGGAAAGAACATATTGAAAACTCCATTTTGGGTGTATCCTTCCTCGCTTTGTTTTTTAACGACAAATGTTCCTTGCCTTGTTAGTTTGAGATTATCATGCATCTATAGTTATCACATCCCTCTGTTCTGCCTATTTATATACTATATATACTCATCCGTTGGGTTCATTGCTTGCCTTGCTTTTTATTCAGCATATCTTTAACAATTTCTACAGACAGAGGTTAGTATCAAGGTGGAGGATAGGAGCACCACCAATTCAACGTGCTGCAGTACCTGATGATAGGGGTACAAGTGGAGCTTTCAGAGGGAGGTCATATCGGCTCAATGGCTAA

mRNA sequence

TTGCTAAGGTTTGTTCGTCTTCAAGCGGTGAAATTCTTTAAAGAAGACTGAGAGATCTCTAGTTCCAAAGCTGCTTCGAGTTTGATTTCTGCTTCTACAATGTCTTCTCCGGCCGAATATTACAACTCTCTTCCGCCTATAAGTAAGGTGTATGGAACCCTATGCCTTTTGGCGACTACAGCCTTCCAACTTGGCTTGTTAAATCCTAATTTTATTGTGTTGCATTTCGGACTCGTATTCAAGCGTTTTCAGGTATGGAGGCTATTCACAAACTTCTTCTTCCTTGGAAAATTCTCTATCAATTTTGGAATTCGTTTACTAATGATAGCAAGGTATGGTGTCCAACTTGAGAATGGACCATTTCAGAGGCGAACAGCAGACTTTCTATGGATGATGATATTTGGAGCCTTAACATTATTGGTGTGTGAAGATCTTTATTATGTACTTTCTGCTATACCAATCTTCTATTCATCATTCTTAGGGATATCACTTGTGTTTATGCTTCTCTACGTCTGGAGTAGAGAATTTCCTACTGCGCAGATCAACATATATGGCCTTGTGACTCTTAAGGCATTTTATCTGCCATGGGCCATGCTAGCGCTGGATGTCATTTTTGGTTCACCTCTTGTACCTGATTTACTTGGAATCTTAGCAGGGCATTTGTATTACTTCTTGACCGTGTTACATCCTCTGGCAGGCGGAAAGAACATATTGAAAACTCCATTTTGGAGGTTAGTATCAAGGTGGAGGATAGGAGCACCACCAATTCAACGTGCTGCAGTACCTGATGATAGGGGTACAAGTGGAGCTTTCAGAGGGAGGTCATATCGGCTCAATGGCTAA

Coding sequence (CDS)

ATGTCTTCTCCGGCCGAATATTACAACTCTCTTCCGCCTATAAGTAAGGTGTATGGAACCCTATGCCTTTTGGCGACTACAGCCTTCCAACTTGGCTTGTTAAATCCTAATTTTATTGTGTTGCATTTCGGACTCGTATTCAAGCGTTTTCAGGTATGGAGGCTATTCACAAACTTCTTCTTCCTTGGAAAATTCTCTATCAATTTTGGAATTCGTTTACTAATGATAGCAAGGTATGGTGTCCAACTTGAGAATGGACCATTTCAGAGGCGAACAGCAGACTTTCTATGGATGATGATATTTGGAGCCTTAACATTATTGGTGTGTGAAGATCTTTATTATGTACTTTCTGCTATACCAATCTTCTATTCATCATTCTTAGGGATATCACTTGTGTTTATGCTTCTCTACGTCTGGAGTAGAGAATTTCCTACTGCGCAGATCAACATATATGGCCTTGTGACTCTTAAGGCATTTTATCTGCCATGGGCCATGCTAGCGCTGGATGTCATTTTTGGTTCACCTCTTGTACCTGATTTACTTGGAATCTTAGCAGGGCATTTGTATTACTTCTTGACCGTGTTACATCCTCTGGCAGGCGGAAAGAACATATTGAAAACTCCATTTTGGAGGTTAGTATCAAGGTGGAGGATAGGAGCACCACCAATTCAACGTGCTGCAGTACCTGATGATAGGGGTACAAGTGGAGCTTTCAGAGGGAGGTCATATCGGCTCAATGGCTAA

Protein sequence

MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAGGKNILKTPFWRLVSRWRIGAPPIQRAAVPDDRGTSGAFRGRSYRLNG
Homology
[Close]
BLAST of Carg12251 vs. NCBI nr
Match: XP_022931760.1 (derlin-1-like [Cucurbita moschata])

HSP 1 Score: 465.3 bits (1196), Expect = 1.3e-127
Identity = 238/249 (95.58%), Postives = 238/249 (95.58%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAEYYNSLPPISK YGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF
Sbjct: 1   MSSPAEYYNSLPPISKAYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLL       VLSAIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLL-------VLSAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL
Sbjct: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAF 240
           LGILAGHLYYFLTVLHPLAGGKNILKTPFW  RLVSRWRIGAPPIQRAAVPD RGTSGAF
Sbjct: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFWVQRLVSRWRIGAPPIQRAAVPDGRGTSGAF 240

Query: 241 RGRSYRLNG 248
           RGRSYRLNG
Sbjct: 241 RGRSYRLNG 242

[Close]
BLAST of Carg12251 vs. NCBI nr
Match: XP_023531299.1 (derlin-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464.5 bits (1194), Expect = 2.2e-127
Identity = 236/249 (94.78%), Postives = 237/249 (95.18%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAEYYNSLPPISK YGTLCLLATT FQLGLLNPNFI LHFGL+FKRFQVWRLFTNFF
Sbjct: 1   MSSPAEYYNSLPPISKAYGTLCLLATTVFQLGLLNPNFIALHFGLIFKRFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLL       VLSAIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLL-------VLSAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL
Sbjct: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAF 240
           LGILAGHLYYFLTVLHPLAGGKNILKTPFW  RLVSRWRIGAPPIQRAAVPDDRGTSGAF
Sbjct: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFWVQRLVSRWRIGAPPIQRAAVPDDRGTSGAF 240

Query: 241 RGRSYRLNG 248
           RGRSYRLNG
Sbjct: 241 RGRSYRLNG 242

[Close]
BLAST of Carg12251 vs. NCBI nr
Match: XP_023005455.1 (derlin-1-like [Cucurbita maxima])

HSP 1 Score: 461.8 bits (1187), Expect = 1.4e-126
Identity = 235/249 (94.38%), Postives = 236/249 (94.78%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAEYYNSLPPISK YGTLCLLATTAFQLGLLNP F  LHFGL+FKRFQVWRLFTNFF
Sbjct: 1   MSSPAEYYNSLPPISKAYGTLCLLATTAFQLGLLNPKFTALHFGLIFKRFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLL       VLSAIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLL-------VLSAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL
Sbjct: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAF 240
           LGILAGHLYYFLTVLHPLAGGKNILKTPFW  RLVSRWRIGAPPIQRAAVPDDRGTSGAF
Sbjct: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFWVQRLVSRWRIGAPPIQRAAVPDDRGTSGAF 240

Query: 241 RGRSYRLNG 248
           RGRSYRLNG
Sbjct: 241 RGRSYRLNG 242

[Close]
BLAST of Carg12251 vs. NCBI nr
Match: XP_008450797.1 (PREDICTED: derlin-1 [Cucumis melo])

HSP 1 Score: 431.8 bits (1109), Expect = 1.6e-117
Identity = 221/249 (88.76%), Postives = 227/249 (91.16%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAE+YNSLPPISK YGTLCLLATTAFQLGL +P  I L +GLVFK FQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFG LTLL       VL+AIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGGLTLL-------VLAAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IF    LGISLVFMLLYVWSREFP AQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL
Sbjct: 121 IFRFPVLGISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAF 240
           LGILAGHLYYFLTVLHPLAGGKNIL+TPFW  RLVSRWRIGAPP+QRAAVPDDRGTSGAF
Sbjct: 181 LGILAGHLYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAF 240

Query: 241 RGRSYRLNG 248
           RGRSYRLNG
Sbjct: 241 RGRSYRLNG 242

[Close]
BLAST of Carg12251 vs. NCBI nr
Match: XP_004135679.1 (PREDICTED: derlin-1 [Cucumis sativus] >KGN66192.1 hypothetical protein Csa_1G575080 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 2.7e-117
Identity = 220/249 (88.35%), Postives = 227/249 (91.16%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAE+YNSLPPISK YGTLC LATTAFQLGL +P  I L +GLVFK FQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCFLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFG+LTLL       VL+AIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGSLTLL-------VLAAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IF    LGISLVFMLLYVWSREFP AQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL
Sbjct: 121 IFQFPVLGISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAF 240
           LGILAGHLYYFLTVLHPLAGGKNIL+TPFW  RLVSRWRIGAPP+QRAAVPDDRGTSGAF
Sbjct: 181 LGILAGHLYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAF 240

Query: 241 RGRSYRLNG 248
           RGRSYRLNG
Sbjct: 241 RGRSYRLNG 242

[Close]
BLAST of Carg12251 vs. TAIR10
Match: AT4G29330.1 (DERLIN-1)

HSP 1 Score: 334.3 bits (856), Expect = 6.2e-92
Identity = 180/273 (65.93%), Postives = 203/273 (74.36%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSP E+YNSLPPI+K YGTLC   T A QLGL+ P  I L   LV K+FQ+WRL TN F
Sbjct: 1   MSSPGEFYNSLPPITKAYGTLCFFTTVATQLGLVAPVHIALIPELVLKQFQIWRLITNLF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLG FSINFGIRLLMIARYGVQLE GPF+RRTADFLWMMIFG+ TLL       VLS IP
Sbjct: 61  FLGGFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSFTLL-------VLSVIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
            F++ FLG+SLVFMLLY+WSREFP A I++YGLVTLKAFYLPWAMLALDVIFGSP++PDL
Sbjct: 121 FFWTPFLGVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAP--PIQRA---------- 240
           LGI+AGHLYYFLTVLHPLA GKN LKTP W  ++V+RWRIGAP   +++A          
Sbjct: 181 LGIIAGHLYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGXXXXXX 240

Query: 241 --------------AVPDDRGTSGAFRGRSYRL 246
                         A P+   T  AFRGRSYRL
Sbjct: 241 XXXXXXXXXXXXXRAPPESSNT--AFRGRSYRL 264

[Close]
BLAST of Carg12251 vs. TAIR10
Match: AT4G04860.1 (DERLIN-2.2)

HSP 1 Score: 142.9 bits (359), Expect = 2.6e-34
Identity = 78/208 (37.50%), Postives = 119/208 (57.21%), Query Frame = 0 

Query: 6   EYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKF 65
           E+Y  +P I++ Y T  ++ T    L +++P  + L+  LV K++Q WRL TNF +  K 
Sbjct: 7   EWYKQMPIITRSYLTAAVITTVGCSLDIISPYNLYLNPTLVVKQYQYWRLVTNFLYFRKM 66

Query: 66  SINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIPIFYSS 125
            ++F   +  +ARY   LE   F+ +TADFL+M++FGA  L     +  +   IP   +S
Sbjct: 67  DLDFMFHMFFLARYCKLLEENSFRGKTADFLYMLLFGASVL---TGIVLIGGMIPYLSAS 126

Query: 126 -----FLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 185
                FL  SL FM++YVWS++ P   ++  GL T  A YLPW +L   ++ G+    DL
Sbjct: 127 FAKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWVDL 186

Query: 186 LGILAGHLYYFLTVLHPLAGGKNILKTP 209
           LG++AGH YYFL  ++P    +  LKTP
Sbjct: 187 LGMIAGHAYYFLAEVYPRMTNRRPLKTP 211

[Close]
BLAST of Carg12251 vs. TAIR10
Match: AT4G21810.1 (DERLIN-2.1)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 75/205 (36.59%), Postives = 119/205 (58.05%), Query Frame = 0 

Query: 6   EYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFFFLGKF 65
           E+Y  +P I++ Y T  ++ T    L +++P  + L+  LV K++Q WRL TNF +  K 
Sbjct: 7   EWYKQMPIITRSYLTAAVVTTVGCSLEIISPYNLYLNPTLVVKQYQFWRLVTNFLYFRKM 66

Query: 66  SINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIPIFYSS 125
            ++F   +  +ARY   LE   F+ +TADFL+M++FGA  L     +  ++  + + +S 
Sbjct: 67  DLDFLFHMFFLARYCKLLEENSFRGKTADFLYMLLFGATVLTGIVLIGGMIPYLSVSFSK 126

Query: 126 --FLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGI 185
             FL  SL FM++YVWS++ P   ++  GL T  A YLPW +L   ++ G+    D LG+
Sbjct: 127 IIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWGDFLGM 186

Query: 186 LAGHLYYFLTVLHPLAGGKNILKTP 209
           +AGH YYFL  ++P    +  LKTP
Sbjct: 187 IAGHAYYFLAFVYPRMTDRRPLKTP 211

[Close]
BLAST of Carg12251 vs. Swiss-Prot
Match: sp|Q8VZU9|DERL1_ARATH (Derlin-1 OS=Arabidopsis thaliana OX=3702 GN=DER1 PE=2 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.1e-90
Identity = 180/273 (65.93%), Postives = 203/273 (74.36%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSP E+YNSLPPI+K YGTLC   T A QLGL+ P  I L   LV K+FQ+WRL TN F
Sbjct: 1   MSSPGEFYNSLPPITKAYGTLCFFTTVATQLGLVAPVHIALIPELVLKQFQIWRLITNLF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLG FSINFGIRLLMIARYGVQLE GPF+RRTADFLWMMIFG+ TLL       VLS IP
Sbjct: 61  FLGGFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSFTLL-------VLSVIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
            F++ FLG+SLVFMLLY+WSREFP A I++YGLVTLKAFYLPWAMLALDVIFGSP++PDL
Sbjct: 121 FFWTPFLGVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAP--PIQRA---------- 240
           LGI+AGHLYYFLTVLHPLA GKN LKTP W  ++V+RWRIGAP   +++A          
Sbjct: 181 LGIIAGHLYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGXXXXXX 240

Query: 241 --------------AVPDDRGTSGAFRGRSYRL 246
                         A P+   T  AFRGRSYRL
Sbjct: 241 XXXXXXXXXXXXXRAPPESSNT--AFRGRSYRL 264

[Close]
BLAST of Carg12251 vs. Swiss-Prot
Match: sp|Q06397|DERL1_ORYSJ (Derlin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=DER1 PE=2 SV=2)

HSP 1 Score: 325.9 bits (834), Expect = 4.0e-88
Identity = 169/251 (67.33%), Postives = 198/251 (78.88%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAEYYNSLPPISK YGTLC  AT   QL +LNP F+ L++  VFK+FQ+WRLFT+FF
Sbjct: 1   MSSPAEYYNSLPPISKAYGTLCFFATVLCQLQILNPPFLALYYPFVFKKFQIWRLFTSFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLE G F++RTADFLWMMIFGA++LL        LSAIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLEKGAFEKRTADFLWMMIFGAISLL-------ALSAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
                FLG+ +V MLLYVWSRE+P +QI++YGLV L++FYLPWAML LDVIFGS ++P L
Sbjct: 121 FLDIYFLGVPMVSMLLYVWSREYPNSQISMYGLVQLRSFYLPWAMLGLDVIFGSEILPGL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGA---PPIQRAAVPDDRGTS 240
           LGIL GH YYFL+VLHPLA GKN LKTP W  ++V+R+RIG     P++ AA       S
Sbjct: 181 LGILVGHTYYFLSVLHPLATGKNYLKTPMWVHKIVARFRIGVQANAPVRPAAA---NTGS 240

Query: 241 GAFRGRSYRLN 247
           GAFRGRSYRL+
Sbjct: 241 GAFRGRSYRLS 241

[Close]
BLAST of Carg12251 vs. Swiss-Prot
Match: sp|Q4G2J5|DER12_MAIZE (Derlin-1.2 OS=Zea mays OX=4577 GN=DER1.2 PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.9e-84
Identity = 165/250 (66.00%), Postives = 191/250 (76.40%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAEYY SLPPISK YGTLC   T   +L +LNP F+ L++  VFK+F+VWR+FT+FF
Sbjct: 1   MSSPAEYYKSLPPISKAYGTLCFFTTVLVRLHILNPLFLYLYYPRVFKKFEVWRIFTSFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLG FSINFGIRLLMIARYGV LE G F +RTADFLWMMIFGA++LL       VLS IP
Sbjct: 61  FLGPFSINFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLL-------VLSVIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
              +  LG+ +V ML+YVWSRE P AQINIYG++ LKAFYLPW ML LDVIFGSPL+P L
Sbjct: 121 QLNTYVLGLPMVSMLVYVWSRENPNAQINIYGILQLKAFYLPWVMLLLDVIFGSPLMPGL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIG--APPIQRAAVPDDRGTSG 240
           LGI+ GHLYY+  VLHPLA GKN LKTP W  ++V+R+RIG  A    RA    + GT G
Sbjct: 181 LGIMVGHLYYYFAVLHPLATGKNYLKTPKWVHKIVARFRIGMQANAPVRAPANGNAGT-G 240

Query: 241 AFRGRSYRLN 247
           AFRGRSYRLN
Sbjct: 241 AFRGRSYRLN 242

[Close]
BLAST of Carg12251 vs. Swiss-Prot
Match: sp|Q4G2J6|DER11_MAIZE (Derlin-1.1 OS=Zea mays OX=4577 GN=DER1.1 PE=2 SV=2)

HSP 1 Score: 310.1 bits (793), Expect = 2.3e-83
Identity = 163/249 (65.46%), Postives = 187/249 (75.10%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAEYY SLPPISK YGTLC   T   QL +L+P F+ L + LVFK+F++WRL T+FF
Sbjct: 1   MSSPAEYYKSLPPISKAYGTLCFFTTVLVQLQILHPLFLYLDYPLVFKKFEIWRLLTSFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FL  FS+ FGIRLLMIARYGV LE G F +RTADFLWMMIFGA++LL       VLS IP
Sbjct: 61  FLAPFSMKFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLL-------VLSIIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           +F S FLGI +V MLLYVWSRE P AQINIYGLV L++FYLPWAML LDVIFGS L+P L
Sbjct: 121 LFNSFFLGIPMVSMLLYVWSRENPNAQINIYGLVQLRSFYLPWAMLLLDVIFGSSLMPGL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAPPIQRAAVP-DDRGTSGA 240
           LGI+ GHLYYF  VLHPLA GK+ LKTP W  ++V+R+RIG         P +    SG 
Sbjct: 181 LGIMVGHLYYFFAVLHPLATGKSYLKTPKWVHKIVARFRIGMQANSPVRPPANGNSGSGV 240

Query: 241 FRGRSYRLN 247
           FRGRSYRLN
Sbjct: 241 FRGRSYRLN 242

[Close]
BLAST of Carg12251 vs. Swiss-Prot
Match: sp|Q54NN1|DERL2_DICDI (Probable derlin-2 homolog OS=Dictyostelium discoideum OX=44689 GN=derl2 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-38
Identity = 86/210 (40.95%), Postives = 127/210 (60.48%), Query Frame = 0 

Query: 1   MSSPAE-YYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNF 60
           M+ P E +Y +LP ++K+Y T C++ + +  LGL+ P  + L+F LVF +++ WRLFTNF
Sbjct: 1   MAQPFEDWYKNLPIVTKIYMTGCVVTSVSVYLGLVGPLRLYLNFPLVFGKYEFWRLFTNF 60

Query: 61  FFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCED-LYYVLSA 120
           FF  +  +NF   +  + R+   LE   F+ R+AD+L+M IFG+  LL+ +  L+Y    
Sbjct: 61  FFYDEIGMNFFFHMYFLVRHSRLLEESSFRGRSADYLFMWIFGSFLLLIMDAFLFYTKIV 120

Query: 121 IPIFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVP 180
             +    FL  S+ FM++YVWSR  P   I+  GL T  A YLPW +L +  +F   L  
Sbjct: 121 TKVL---FLAPSIAFMVIYVWSRRNPNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTT 180

Query: 181 DLLGILAGHLYYFLTVLHPLAGGKNILKTP 209
           DLLG +AGH YYFL   +PL   + +LKTP
Sbjct: 181 DLLGAVAGHAYYFLEDAYPLISNRRLLKTP 207

[Close]
BLAST of Carg12251 vs. TrEMBL
Match: tr|A0A1S3BQ27|A0A1S3BQ27_CUCME (Derlin OS=Cucumis melo OX=3656 GN=LOC103492274 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.0e-117
Identity = 221/249 (88.76%), Postives = 227/249 (91.16%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAE+YNSLPPISK YGTLCLLATTAFQLGL +P  I L +GLVFK FQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFG LTLL       VL+AIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGGLTLL-------VLAAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IF    LGISLVFMLLYVWSREFP AQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL
Sbjct: 121 IFRFPVLGISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAF 240
           LGILAGHLYYFLTVLHPLAGGKNIL+TPFW  RLVSRWRIGAPP+QRAAVPDDRGTSGAF
Sbjct: 181 LGILAGHLYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAF 240

Query: 241 RGRSYRLNG 248
           RGRSYRLNG
Sbjct: 241 RGRSYRLNG 242

[Close]
BLAST of Carg12251 vs. TrEMBL
Match: tr|A0A0A0LZA3|A0A0A0LZA3_CUCSA (Derlin OS=Cucumis sativus OX=3659 GN=Csa_1G575080 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.8e-117
Identity = 220/249 (88.35%), Postives = 227/249 (91.16%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAE+YNSLPPISK YGTLC LATTAFQLGL +P  I L +GLVFK FQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCFLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFG+LTLL       VL+AIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGSLTLL-------VLAAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IF    LGISLVFMLLYVWSREFP AQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL
Sbjct: 121 IFQFPVLGISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAPPIQRAAVPDDRGTSGAF 240
           LGILAGHLYYFLTVLHPLAGGKNIL+TPFW  RLVSRWRIGAPP+QRAAVPDDRGTSGAF
Sbjct: 181 LGILAGHLYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAF 240

Query: 241 RGRSYRLNG 248
           RGRSYRLNG
Sbjct: 241 RGRSYRLNG 242

[Close]
BLAST of Carg12251 vs. TrEMBL
Match: tr|A0A1R3IJM9|A0A1R3IJM9_COCAP (Derlin OS=Corchorus capsularis OX=210143 GN=CCACVL1_11774 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.5e-100
Identity = 195/251 (77.69%), Postives = 213/251 (84.86%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAE+YNSLPPISK YGT CL+ATTA+QLGLL+   I L +  VFK FQVWRL TNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTACLVATTAYQLGLLDVTHIALIYPFVFKYFQVWRLITNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLE GPF+RRTADFLWMMIFGAL+LL       VLSAIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLEQGPFERRTADFLWMMIFGALSLL-------VLSAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IF++ FLGISLVFML+YVWSREFP AQI+IYGLV LKAFYLPWAMLALDVIFGSPLVPDL
Sbjct: 121 IFWTPFLGISLVFMLVYVWSREFPNAQISIYGLVQLKAFYLPWAMLALDVIFGSPLVPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIG--APPIQRAAVPDDRGTSG 240
           LGI+AGHLYYFLTVLHPLA GK +LKTP W  ++V+RWRIG  AP  +R A   +R T  
Sbjct: 181 LGIIAGHLYYFLTVLHPLATGKVLLKTPMWVHKIVARWRIGAPAPASRRTAAEPERSTGV 240

Query: 241 AFRGRSYRLNG 248
           AFRGRSYRLNG
Sbjct: 241 AFRGRSYRLNG 244

[Close]
BLAST of Carg12251 vs. TrEMBL
Match: tr|A0A1R3GJS2|A0A1R3GJS2_9ROSI (Derlin OS=Corchorus olitorius OX=93759 GN=COLO4_34717 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.5e-100
Identity = 195/251 (77.69%), Postives = 213/251 (84.86%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAE+YNSLPPISK YGT CL+ATTA+QLGLL+   I L +  VFK FQVWRL TNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTACLVATTAYQLGLLDVTHIALIYPFVFKYFQVWRLITNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLGKFSINFGIRLLMIARYGVQLE GPF+RRTADFLWMMIFGAL+LL       VLSAIP
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLEQGPFERRTADFLWMMIFGALSLL-------VLSAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IF++ FLGISLVFML+YVWSREFP AQI+IYGLV LKAFYLPWAMLALDVIFGSPLVPDL
Sbjct: 121 IFWTPFLGISLVFMLVYVWSREFPNAQISIYGLVQLKAFYLPWAMLALDVIFGSPLVPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIG--APPIQRAAVPDDRGTSG 240
           LGI+AGHLYYFLTVLHPLA GK +LKTP W  ++V+RWRIG  AP  +R A   +R T  
Sbjct: 181 LGIIAGHLYYFLTVLHPLATGKVLLKTPMWVHKIVARWRIGAPAPASRRTAAEPERSTGV 240

Query: 241 AFRGRSYRLNG 248
           AFRGRSYRLNG
Sbjct: 241 AFRGRSYRLNG 244

[Close]
BLAST of Carg12251 vs. TrEMBL
Match: tr|A0A0D2PJJ4|A0A0D2PJJ4_GOSRA (Derlin OS=Gossypium raimondii OX=29730 GN=B456_004G282600 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 3.4e-100
Identity = 197/251 (78.49%), Postives = 212/251 (84.46%), Query Frame = 0 

Query: 1   MSSPAEYYNSLPPISKVYGTLCLLATTAFQLGLLNPNFIVLHFGLVFKRFQVWRLFTNFF 60
           MSSPAE+YNSLPPISK YGT+CLL TTA QLGLLN  +I L    VFK FQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTVCLLTTTASQLGLLNIFYIALLHEYVFKYFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVCEDLYYVLSAIP 120
           FLG+FSINFGIRLLMIARYGVQLE GPF+RRTADFLWMMIFGAL+LL       VLSAIP
Sbjct: 61  FLGEFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGALSLL-------VLSAIP 120

Query: 121 IFYSSFLGISLVFMLLYVWSREFPTAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDL 180
           IF + FLG+SLVFMLLYVWSREFP AQINIYGLVTLKAFYLPWAMLALDVIFGS L+PDL
Sbjct: 121 IFRTPFLGVSLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSELIPDL 180

Query: 181 LGILAGHLYYFLTVLHPLAGGKNILKTPFW--RLVSRWRIGAP--PIQRAAVPDDRGTSG 240
           LGI+AGHLYYFLTVLHPLA GK  LKTP W  +LV+R+RIGAP  P  R+A P DR T  
Sbjct: 181 LGIIAGHLYYFLTVLHPLATGKVFLKTPMWVNKLVARYRIGAPSRPSSRSAAPSDRPTGV 240

Query: 241 AFRGRSYRLNG 248
           AF GRSYRL+G
Sbjct: 241 AFSGRSYRLSG 244

The following BLAST results are available for this feature:
BLAST of Carg12251 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022931760.11.3e-12795.58derlin-1-like [Cucurbita moschata][more]
XP_023531299.12.2e-12794.78derlin-1-like [Cucurbita pepo subsp. pepo][more]
XP_023005455.11.4e-12694.38derlin-1-like [Cucurbita maxima][more]
XP_008450797.11.6e-11788.76PREDICTED: derlin-1 [Cucumis melo][more]
XP_004135679.12.7e-11788.35PREDICTED: derlin-1 [Cucumis sativus] >KGN66192.1 hypothetical protein Csa_1G575... [more]
BLAST of Carg12251 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29330.16.2e-9265.93DERLIN-1[more]
AT4G04860.12.6e-3437.50DERLIN-2.2[more]
AT4G21810.11.3e-3336.59DERLIN-2.1[more]
BLAST of Carg12251 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8VZU9|DERL1_ARATH1.1e-9065.93Derlin-1 OS=Arabidopsis thaliana OX=3702 GN=DER1 PE=2 SV=1[more]
sp|Q06397|DERL1_ORYSJ4.0e-8867.33Derlin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=DER1 PE=2 SV=2[more]
sp|Q4G2J5|DER12_MAIZE5.9e-8466.00Derlin-1.2 OS=Zea mays OX=4577 GN=DER1.2 PE=2 SV=1[more]
sp|Q4G2J6|DER11_MAIZE2.3e-8365.46Derlin-1.1 OS=Zea mays OX=4577 GN=DER1.1 PE=2 SV=2[more]
sp|Q54NN1|DERL2_DICDI1.3e-3840.95Probable derlin-2 homolog OS=Dictyostelium discoideum OX=44689 GN=derl2 PE=3 SV=... [more]
BLAST of Carg12251 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BQ27|A0A1S3BQ27_CUCME1.0e-11788.76Derlin OS=Cucumis melo OX=3656 GN=LOC103492274 PE=3 SV=1[more]
tr|A0A0A0LZA3|A0A0A0LZA3_CUCSA1.8e-11788.35Derlin OS=Cucumis sativus OX=3659 GN=Csa_1G575080 PE=3 SV=1[more]
tr|A0A1R3IJM9|A0A1R3IJM9_COCAP1.5e-10077.69Derlin OS=Corchorus capsularis OX=210143 GN=CCACVL1_11774 PE=3 SV=1[more]
tr|A0A1R3GJS2|A0A1R3GJS2_9ROSI1.5e-10077.69Derlin OS=Corchorus olitorius OX=93759 GN=COLO4_34717 PE=3 SV=1[more]
tr|A0A0D2PJJ4|A0A0D2PJJ4_GOSRA3.4e-10078.49Derlin OS=Gossypium raimondii OX=29730 GN=B456_004G282600 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007599DER1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12251-RACarg12251-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04511DER1coord: 11..208
e-value: 1.0E-45
score: 155.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..247
NoneNo IPR availablePANTHERPTHR11009:SF13SUBFAMILY NOT NAMEDcoord: 1..216
NoneNo IPR availableSUPERFAMILYSSF144091Rhomboid-likecoord: 9..193
IPR007599DerlinPANTHERPTHR11009DER1-LIKE PROTEIN, DERLINcoord: 1..216

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12251Cla011250Watermelon (97103) v1carwmB0036
Carg12251Csa1G575080Cucumber (Chinese Long) v2carcuB0033
Carg12251MELO3C015425Melon (DHL92) v3.5.1carmeB0036
Carg12251ClCG03G016020Watermelon (Charleston Gray)carwcgB0038
Carg12251CSPI01G27680Wild cucumber (PI 183967)carcpiB0035
Carg12251Cucsa.288700Cucumber (Gy14) v1carcgyB0043
Carg12251CmaCh11G006590Cucurbita maxima (Rimu)carcmaB0047
Carg12251CmaCh10G006790Cucurbita maxima (Rimu)carcmaB0044
Carg12251CmoCh11G006710Cucurbita moschata (Rifu)carcmoB0050
Carg12251CmoCh10G007070Cucurbita moschata (Rifu)carcmoB0047
Carg12251Lsi06G002300Bottle gourd (USVL1VR-Ls)carlsiB034
Carg12251Cp4.1LG18g03870Cucurbita pepo (Zucchini)carcpeB0053
Carg12251Cp4.1LG04g10510Cucurbita pepo (Zucchini)carcpeB0054
Carg12251CsGy1G026900Cucumber (Gy14) v2carcgybB0033
Carg12251MELO3C015425.2Melon (DHL92) v3.6.1carmedB0037
Carg12251CsaV3_1G039940Cucumber (Chinese Long) v3carcucB0035
Carg12251Cla97C03G066320Watermelon (97103) v2carwmbB0032
Carg12251Bhi02G001616Wax gourdcarwgoB0044
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg12251Carg13033Silver-seed gourdcarcarB038
The following block(s) are covering this gene:
GeneOrganismBlock
Carg12251Silver-seed gourdcarcarB046
Carg12251Silver-seed gourdcarcarB042
Carg12251Silver-seed gourdcarcarB044
Carg12251Cucumber (Gy14) v2carcgybB0041
Carg12251Cucumber (Gy14) v1carcgyB0040
Carg12251Cucurbita maxima (Rimu)carcmaB0048
Carg12251Cucurbita maxima (Rimu)carcmaB0049
Carg12251Cucurbita moschata (Rifu)carcmoB0051
Carg12251Cucurbita moschata (Rifu)carcmoB0052
Carg12251Cucurbita pepo (Zucchini)carcpeB0049
Carg12251Cucurbita pepo (Zucchini)carcpeB0055
Carg12251Wild cucumber (PI 183967)carcpiB0044
Carg12251Cucumber (Chinese Long) v2carcuB0042
Carg12251Cucumber (Chinese Long) v3carcucB0045
Carg12251Bottle gourd (USVL1VR-Ls)carlsiB033
Carg12251Melon (DHL92) v3.5.1carmeB0039
Carg12251Melon (DHL92) v3.6.1carmedB0040
Carg12251Watermelon (Charleston Gray)carwcgB0037
Carg12251Watermelon (97103) v1carwmB0038
Carg12251Watermelon (97103) v2carwmbB0031
Carg12251Watermelon (97103) v2carwmbB0039
Carg12251Wax gourdcarwgoB0039
Carg12251Wax gourdcarwgoB0041