Carg12228 (gene) Silver-seed gourd

Overview
NameCarg12228
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionExostosin family protein
LocationCucurbita_argyrosperma_scaffold_054 : 560212 .. 560611 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCCTCCAGAAACTTATGTAGCGAGAAATCTTCTTAGAGATCTTGGAGGAAAACCTGCTTCACAAAGACATGTTCATGCCTTTTATGGTGGGAATATGCATGGTTATGTCTTAACCCTGATATGAAGATCTTTGGTCCAATGCCTCATTGCAATGCAACCAAAATGATTACATTCAGCATATGAAGAGCAGCAAATACTGCATCTGCCCAAAGGGTTACGAGCTCAATAGTCCACGGGTTGTGGAAGCCATGTTTTATGAGTGTGTACCTGTGATCATATCAGACAATTTCGTACCACCATTTTTAGAGGTGTTGAATTGGGAAGCATTTTCAGTGATTGTTGCAGAAAAGGATATTCCATACTTACAACAACATACTGCTTTCTTTCAATACTAA

mRNA sequence

ATGTCTCCTCCAGAAACTTATGTAGCGAGAAATCTTCTTAGAGATCTTGGAGGAAAACCTGCTTCACAAAGACATGTTCATGCCTTTTATGGTGGGAATATGCATGATCTTTGGTCCAATGCCTCATTGCAATGCAACCAAAATGATTACATTCAGCATATGAAGAGCAGCAAATACTGCATCTGCCCAAAGGGTTACGAGCTCAATAGTCCACGGGTTGTGGAAGCCATGTTTTATGAGTGTGTACCTGTGATCATATCAGACAATTTCGTACCACCATTTTTAGAGGTGTTGAATTGGGAAGCATTTTCAGTGATTGTTGCAGAAAAGGATATTCCATACTTACAACAACATACTGCTTTCTTTCAATACTAA

Coding sequence (CDS)

ATGTCTCCTCCAGAAACTTATGTAGCGAGAAATCTTCTTAGAGATCTTGGAGGAAAACCTGCTTCACAAAGACATGTTCATGCCTTTTATGGTGGGAATATGCATGATCTTTGGTCCAATGCCTCATTGCAATGCAACCAAAATGATTACATTCAGCATATGAAGAGCAGCAAATACTGCATCTGCCCAAAGGGTTACGAGCTCAATAGTCCACGGGTTGTGGAAGCCATGTTTTATGAGTGTGTACCTGTGATCATATCAGACAATTTCGTACCACCATTTTTAGAGGTGTTGAATTGGGAAGCATTTTCAGTGATTGTTGCAGAAAAGGATATTCCATACTTACAACAACATACTGCTTTCTTTCAATACTAA

Protein sequence

MSPPETYVARNLLRDLGGKPASQRHVHAFYGGNMHDLWSNASLQCNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVAEKDIPYLQQHTAFFQY
Homology
[Close]
BLAST of Carg12228 vs. NCBI nr
Match: XP_022961026.1 (probable glycosyltransferase At5g03795 [Cucurbita moschata])

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 92/137 (67.15%), Postives = 103/137 (75.18%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 479 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 538

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 539 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 598

[Close]
BLAST of Carg12228 vs. NCBI nr
Match: XP_022987636.1 (probable glycosyltransferase At5g03795 [Cucurbita maxima])

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 92/137 (67.15%), Postives = 103/137 (75.18%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 484 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 543

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 544 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 603

[Close]
BLAST of Carg12228 vs. NCBI nr
Match: XP_023516188.1 (probable glycosyltransferase At5g03795 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 92/137 (67.15%), Postives = 103/137 (75.18%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 479 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 538

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 539 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 598

[Close]
BLAST of Carg12228 vs. NCBI nr
Match: XP_004148727.1 (PREDICTED: probable glycosyltransferase At5g03795 [Cucumis sativus] >KGN65348.1 hypothetical protein Csa_1G364960 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 3.5e-41
Identity = 92/137 (67.15%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 473 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 532

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 533 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 592

[Close]
BLAST of Carg12228 vs. NCBI nr
Match: XP_008462761.1 (PREDICTED: probable glycosyltransferase At5g03795 [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 3.5e-41
Identity = 92/137 (67.15%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 473 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 532

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 533 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 592

[Close]
BLAST of Carg12228 vs. TAIR10
Match: AT5G19670.1 (Exostosin family protein)

HSP 1 Score: 161.0 bits (406), Expect = 4.7e-40
Identity = 84/137 (61.31%), Postives = 96/137 (70.07%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMHDLWSNASLQ-------------- 60
           +S PETYV  A+N LRDLGGKP SQR   AFY G+MH       LQ              
Sbjct: 419 ISLPETYVRAAKNPLRDLGGKPPSQRRTLAFYAGSMHGYLRQILLQHWKDKDPDMKIFGR 478

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YI+ MKSSKYCICPKGYE+NSPRVVE++FYECVPVIISDNFVPPF EVL+
Sbjct: 479 MPFGVASKMNYIEQMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFFEVLD 538

[Close]
BLAST of Carg12228 vs. TAIR10
Match: AT4G32790.1 (Exostosin family protein)

HSP 1 Score: 146.7 bits (369), Expect = 9.2e-36
Identity = 75/134 (55.97%), Postives = 89/134 (66.42%), Query Frame = 0 

Query: 4   PET--YVARNLLRDLGGKPASQRHVHAFYGGNMH-------------------DLWSNAS 63
           PET   V R  LR LGGKP SQR + AF+ G MH                    ++S   
Sbjct: 408 PETTILVPRRPLRALGGKPVSQRQILAFFAGGMHGYLRPLLLQNWGGNRDPDMKIFSEIP 467

Query: 64  LQCNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEA 117
               +  Y+++MKSSKYCICPKG+E+NSPRVVEA+FYECVPVIISDNFVPPF EVLNWE+
Sbjct: 468 KSKGKKSYMEYMKSSKYCICPKGHEVNSPRVVEALFYECVPVIISDNFVPPFFEVLNWES 527

[Close]
BLAST of Carg12228 vs. TAIR10
Match: AT5G25820.1 (Exostosin family protein)

HSP 1 Score: 131.0 bits (328), Expect = 5.2e-31
Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 0 

Query: 2   SPPETYV--ARNLLRDLGGKPASQRHVHAFYGGN---------MHDLWSN---------- 61
           S PET+V   +  L ++GGK A+QR + AF+ G          +   W N          
Sbjct: 464 SLPETFVRDPKKPLSNMGGKSANQRPILAFFAGKPDHGYLRPILLSYWGNNKDPDLKIFG 523

Query: 62  --ASLQCNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVL 118
                + N+N Y+Q MK+SKYCIC KG+E+NSPRVVEA+FY+CVPVIISDNFVPPF EVL
Sbjct: 524 KLPRTKGNKN-YLQFMKTSKYCICAKGFEVNSPRVVEAIFYDCVPVIISDNFVPPFFEVL 583

[Close]
BLAST of Carg12228 vs. TAIR10
Match: AT4G16745.2 (Exostosin family protein)

HSP 1 Score: 127.1 bits (318), Expect = 7.5e-30
Identity = 66/139 (47.48%), Postives = 89/139 (64.03%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLG-GKPASQRHVHAFYGGNMHDL--------WSNASLQ----- 60
           +S PET +  A   LR++G G   SQR + AF+ GN+H          W N         
Sbjct: 342 VSLPETSIRNAGRPLRNIGNGNRVSQRPILAFFAGNLHGRVRPKLLKHWRNKDEDMKIYG 401

Query: 61  ------CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVL 118
                   +  Y+QHMKSSKYC+CP GYE+NSPR+VEA++YECVPV+I+DNF+ PF +VL
Sbjct: 402 PLPHNVARKMTYVQHMKSSKYCLCPMGYEVNSPRIVEAIYYECVPVVIADNFMLPFSDVL 461

[Close]
BLAST of Carg12228 vs. TAIR10
Match: AT5G11610.1 (Exostosin family protein)

HSP 1 Score: 125.6 bits (314), Expect = 2.2e-29
Identity = 64/134 (47.76%), Postives = 90/134 (67.16%), Query Frame = 0 

Query: 1   MSPPETYVA--RNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PET V+  +N    +GG   S+R + AF+ G++H        + WS+   Q      
Sbjct: 360 VSLPETKVSSLQNPNGKIGGSRPSKRTILAFFAGSLHGYVRPILLNQWSSRPEQDMKIFN 419

Query: 61  -CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAF 118
             +   YI++MK S++C+C KGYE+NSPRVVE++ Y CVPVIISDNFVPPFLE+LNWE+F
Sbjct: 420 RIDHKSYIRYMKRSRFCVCAKGYEVNSPRVVESILYGCVPVIISDNFVPPFLEILNWESF 479

[Close]
BLAST of Carg12228 vs. Swiss-Prot
Match: sp|Q9FFN2|GLYT3_ARATH (Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana OX=3702 GN=At5g03795 PE=3 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 4.7e-21
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 0 

Query: 1   MSPPETYVARNLLRDL-GGKPASQRHVHAFYGGNMH--------DLWSNASLQCNQNDYI 60
           +S PE  +    L  L GG   S R + AF+ G +H          W N       + Y+
Sbjct: 331 VSIPEINLRTGSLTGLVGGPSPSSRPILAFFAGGVHGPVRPVLLQHWENKDNDIRVHKYL 390

Query: 61  QH-------MKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFS 117
                    M++SK+CICP GYE+ SPR+VEA++  CVPV+I+  +VPPF +VLNW +FS
Sbjct: 391 PRGTSYSDMMRNSKFCICPSGYEVASPRIVEALYSGCVPVLINSGYVPPFSDVLNWRSFS 450

[Close]
BLAST of Carg12228 vs. Swiss-Prot
Match: sp|Q3E7Q9|GLYT6_ARATH (Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana OX=3702 GN=At5g25310 PE=3 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-18
Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 0 

Query: 49  DYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVA 108
           +Y   M+SSK+C CP GYE+ SPRV+EA++ EC+PVI+S NFV PF +VL WE FSV+V 
Sbjct: 359 NYYDFMRSSKFCFCPSGYEVASPRVIEAIYSECIPVILSVNFVLPFTDVLRWETFSVLVD 418

Query: 109 EKDIPYLQQ 118
             +IP L++
Sbjct: 419 VSEIPRLKE 427

[Close]
BLAST of Carg12228 vs. Swiss-Prot
Match: sp|Q9SSE8|GLYT1_ARATH (Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana OX=3702 GN=At3g07620 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-17
Identity = 39/69 (56.52%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 49  DYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVA 108
           DY + M+ S++CICP G+E+ SPRV EA++  CVPV+IS+N+V PF +VLNWE FSV V+
Sbjct: 349 DYTEMMRKSRFCICPSGHEVASPRVPEAIYSGCVPVLISENYVLPFSDVLNWEKFSVSVS 408

Query: 109 EKDIPYLQQ 118
            K+IP L++
Sbjct: 409 VKEIPELKR 417

[Close]
BLAST of Carg12228 vs. Swiss-Prot
Match: sp|Q94AA9|XGD1_ARATH (Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana OX=3702 GN=XGD1 PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-15
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 0 

Query: 1   MSPPETYVARNLL-RDLGGKPASQRHVHAFYGGNMHD-----LWSNASLQCNQ------- 60
           +S PE Y+ +  L     GK    R + AF+ G  H      L+ +     N+       
Sbjct: 314 VSIPEIYLPKGKLGPSFLGKSPRVRSILAFFAGRSHGEIRKILFQHWKEMDNEVQVYDRL 373

Query: 61  ---NDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFS 120
               DY + M  SK+C+CP G+E+ SPR VEA++  CVPVIISDN+  PF +VLNW++FS
Sbjct: 374 PPGKDYTKTMGMSKFCLCPSGWEVASPREVEAIYAGCVPVIISDNYSLPFSDVLNWDSFS 433

Query: 121 V---IVAEKDIPYLQQHTAFFQY 125
           +   +   K+I  + Q  +  +Y
Sbjct: 434 IQIPVSRIKEIKTILQSVSLVRY 456

[Close]
BLAST of Carg12228 vs. Swiss-Prot
Match: sp|Q9LFP3|GLYT4_ARATH (Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana OX=3702 GN=At5g11130/At5g11120 PE=3 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-14
Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 0 

Query: 18  GKPASQRHVHAFYGGNMH----------------DLWSNASLQCNQNDYIQHMKSSKYCI 77
           G+P   R + AF+ G  H                D+    +L    N Y + M  +K+C+
Sbjct: 310 GEPPQNRKLLAFFAGGSHGDVRKILFQHWKEKDKDVLVYENLPKTMN-YTKMMDKAKFCL 369

Query: 78  CPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVAEKDIPYLQQ 118
           CP G+E+ SPR+VE+++  CVPVII+D +V PF +VLNW+ FSV +    +P +++
Sbjct: 370 CPSGWEVASPRIVESLYSGCVPVIIADYYVLPFSDVLNWKTFSVHIPISKMPDIKK 424

[Close]
BLAST of Carg12228 vs. TrEMBL
Match: tr|A0A1S3CJA3|A0A1S3CJA3_CUCME (probable glycosyltransferase At5g03795 OS=Cucumis melo OX=3656 GN=LOC103501046 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-41
Identity = 92/137 (67.15%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 473 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 532

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 533 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 592

[Close]
BLAST of Carg12228 vs. TrEMBL
Match: tr|A0A0A0LU64|A0A0A0LU64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G364960 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-41
Identity = 92/137 (67.15%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 473 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 532

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 533 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 592

[Close]
BLAST of Carg12228 vs. TrEMBL
Match: tr|A0A103XNN0|A0A103XNN0_CYNCS (Exostosin-like protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_004053 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40
Identity = 88/138 (63.77%), Postives = 103/138 (74.64%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PE YV  ARN LRDLGGKPAS+RH+ AFY GNMH        + W+N          
Sbjct: 642 VSLPECYVRSARNPLRDLGGKPASERHIFAFYAGNMHGYLRKILLEYWNNKDADMKISGP 701

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 118
                 ++ +YI+HMKSSKYCICPKGYE+NSPRVVE++FYECVPVIISDNFVPPF EVL+
Sbjct: 702 MPPGVASKMNYIEHMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFFEVLD 761

[Close]
BLAST of Carg12228 vs. TrEMBL
Match: tr|A0A2G9H8M8|A0A2G9H8M8_9LAMI (Acetylglucosaminyltransferase EXT1/exostosin 1 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13711 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.5e-40
Identity = 87/137 (63.50%), Postives = 100/137 (72.99%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMHDLWSNASLQ-------------- 60
           +S PETYV  ARN LRDLGGKP SQRH+ AFY GNMH       L+              
Sbjct: 446 VSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNMHGYLRPILLKHWKDNEPDMKIFGP 505

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSS+YCICPKGYE+NSPR+VEA+FYECVPVIISDNFVPPF EVLN
Sbjct: 506 MPPGVASKMNYIQHMKSSRYCICPKGYEVNSPRIVEAIFYECVPVIISDNFVPPFFEVLN 565

[Close]
BLAST of Carg12228 vs. TrEMBL
Match: tr|A0A2G9G9F8|A0A2G9G9F8_9LAMI (Acetylglucosaminyltransferase EXT1/exostosin 1 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25568 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.5e-40
Identity = 87/137 (63.50%), Postives = 100/137 (72.99%), Query Frame = 0 

Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMHDLWSNASLQ-------------- 60
           +S PETYV  ARN LRDLGGKP SQRH+ AFY GNMH       L+              
Sbjct: 446 VSLPETYVRSARNPLRDLGGKPPSQRHILAFYAGNMHGYLRPILLKHWKDNEPDMKIFGP 505

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSS+YCICPKGYE+NSPR+VEA+FYECVPVIISDNFVPPF EVLN
Sbjct: 506 MPPGVASKMNYIQHMKSSRYCICPKGYEVNSPRIVEAIFYECVPVIISDNFVPPFFEVLN 565

The following BLAST results are available for this feature:
BLAST of Carg12228 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961026.11.2e-4167.15probable glycosyltransferase At5g03795 [Cucurbita moschata][more]
XP_022987636.11.2e-4167.15probable glycosyltransferase At5g03795 [Cucurbita maxima][more]
XP_023516188.11.2e-4167.15probable glycosyltransferase At5g03795 [Cucurbita pepo subsp. pepo][more]
XP_004148727.13.5e-4167.15PREDICTED: probable glycosyltransferase At5g03795 [Cucumis sativus] >KGN65348.1 ... [more]
XP_008462761.13.5e-4167.15PREDICTED: probable glycosyltransferase At5g03795 [Cucumis melo][more]
BLAST of Carg12228 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19670.14.7e-4061.31Exostosin family protein[more]
AT4G32790.19.2e-3655.97Exostosin family protein[more]
AT5G25820.15.2e-3149.64Exostosin family protein[more]
AT4G16745.27.5e-3047.48Exostosin family protein[more]
AT5G11610.12.2e-2947.76Exostosin family protein[more]
BLAST of Carg12228 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FFN2|GLYT3_ARATH4.7e-2140.91Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana OX=3702 GN=At5g03... [more]
sp|Q3E7Q9|GLYT6_ARATH4.8e-1856.52Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana OX=3702 GN=At5g25... [more]
sp|Q9SSE8|GLYT1_ARATH1.4e-1756.52Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana OX=3702 GN=At3g07... [more]
sp|Q94AA9|XGD1_ARATH1.3e-1535.66Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9LFP3|GLYT4_ARATH2.5e-1435.34Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana OX=3702 GN=At5g11... [more]
BLAST of Carg12228 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CJA3|A0A1S3CJA3_CUCME2.3e-4167.15probable glycosyltransferase At5g03795 OS=Cucumis melo OX=3656 GN=LOC103501046 P... [more]
tr|A0A0A0LU64|A0A0A0LU64_CUCSA2.3e-4167.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G364960 PE=4 SV=1[more]
tr|A0A103XNN0|A0A103XNN0_CYNCS1.2e-4063.77Exostosin-like protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_0040... [more]
tr|A0A2G9H8M8|A0A2G9H8M8_9LAMI7.5e-4063.50Acetylglucosaminyltransferase EXT1/exostosin 1 OS=Handroanthus impetiginosus OX=... [more]
tr|A0A2G9G9F8|A0A2G9G9F8_9LAMI7.5e-4063.50Acetylglucosaminyltransferase EXT1/exostosin 1 OS=Handroanthus impetiginosus OX=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016757transferase activity, transferring glycosyl groups
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
Vocabulary: INTERPRO
TermDefinition
IPR004263Exostosin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12228-RACarg12228-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004263Exostosin-likePFAMPF03016Exostosincoord: 11..115
e-value: 5.3E-26
score: 91.4
NoneNo IPR availablePANTHERPTHR11062:SF84EXOSTOSIN FAMILY PROTEINcoord: 46..117
NoneNo IPR availablePANTHERPTHR11062EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATEDcoord: 2..37
NoneNo IPR availablePANTHERPTHR11062:SF84EXOSTOSIN FAMILY PROTEINcoord: 2..37
NoneNo IPR availablePANTHERPTHR11062EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATEDcoord: 46..117

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12228CmaCh11G006370Cucurbita maxima (Rimu)carcmaB0047
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg12228Silver-seed gourdcarcarB046
Carg12228Silver-seed gourdcarcarB041
Carg12228Silver-seed gourdcarcarB042
Carg12228Silver-seed gourdcarcarB044
Carg12228Silver-seed gourdcarcarB045
Carg12228Silver-seed gourdcarcarB047
Carg12228Cucumber (Gy14) v2carcgybB0041
Carg12228Cucumber (Gy14) v1carcgyB0040
Carg12228Cucurbita maxima (Rimu)carcmaB0044
Carg12228Cucurbita maxima (Rimu)carcmaB0048
Carg12228Cucurbita maxima (Rimu)carcmaB0049
Carg12228Cucurbita moschata (Rifu)carcmoB0047
Carg12228Cucurbita moschata (Rifu)carcmoB0050
Carg12228Cucurbita moschata (Rifu)carcmoB0051
Carg12228Cucurbita moschata (Rifu)carcmoB0052
Carg12228Cucurbita pepo (Zucchini)carcpeB0049
Carg12228Cucurbita pepo (Zucchini)carcpeB0053
Carg12228Cucurbita pepo (Zucchini)carcpeB0054
Carg12228Cucurbita pepo (Zucchini)carcpeB0055
Carg12228Wild cucumber (PI 183967)carcpiB0044
Carg12228Cucumber (Chinese Long) v2carcuB0042
Carg12228Cucumber (Chinese Long) v3carcucB0045
Carg12228Bottle gourd (USVL1VR-Ls)carlsiB033
Carg12228Bottle gourd (USVL1VR-Ls)carlsiB037
Carg12228Melon (DHL92) v3.5.1carmeB0039
Carg12228Melon (DHL92) v3.6.1carmedB0038
Carg12228Melon (DHL92) v3.6.1carmedB0040
Carg12228Watermelon (Charleston Gray)carwcgB0037
Carg12228Watermelon (Charleston Gray)carwcgB0040
Carg12228Watermelon (97103) v1carwmB0038
Carg12228Watermelon (97103) v1carwmB0039
Carg12228Watermelon (97103) v2carwmbB0031
Carg12228Watermelon (97103) v2carwmbB0034
Carg12228Watermelon (97103) v2carwmbB0039
Carg12228Wax gourdcarwgoB0038
Carg12228Wax gourdcarwgoB0041
Carg12228Wax gourdcarwgoB0043