Carg12202 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12202
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Signal peptidase I, putative
Location	Cucurbita_argyrosperma_scaffold_054 : 435263 .. 437710 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAACCCCAACAGCTTGAATTTGAAATTCATCACAGAGGCGCAATTCTGCCACAGAGGATGCCATCTCTTCATCTCCTCTCGTCAGTATCTTCTTTTGACAACCCTTCTCTACAACGTGCGCGCCTCTCGAAACCCGGTAACAGTTCTAATCCCCCAATTCATTCAAATGCCATTTCCCCAAAATTCGCACATGCCCACTTCGCCAATCGCTCTATTTCCCCTTCTGTAACTCTCAGTCAATTGCGTACTCAATCCCGAAGCAGTGGTTTTCTACCCTTTAAGCCTCCAAACGATGGAGCCCACTGGAAGAGGTGTTACTGTAGTGCTGTTAATGACTCTGACGAGAAAACTAGGTCAGTTTTGGACTCCAGTGGCGGCGGTGATGGAGGTGAAGGCGGCGATGGAAGTGATGATAATGGGAAGGTGGATAAGCAAAAGGGTTCTTCTGGGTTTCTGCCGGAATGGTTGAATTTAACTTCGGACGACGCCAAAACGGTCCTTGCAGCCATTGCAATATCTCTTGCCTTCAGGACGTTTATTGCAGAACCGAGGTACATTCCGTCGCTATCAATGTATCCTACCTTTGATGTTGGGGATCGACTTGTAGCAGAGAAGGTAGAAATCTTGTTCATTGTTCTTAATCGTATTATTCAACTGTTCTTCACGGTTATTAGAAAAAATTATACAGATTGGGATATGATATTCATAGTTAAAATTGCCTGAATCCCAAGTTCTTGGATTCAACTAAGCTTTGAAATAAAGGGATAAGATCTATGATTTCTATTCTGTGTATGAAATTTCTGGTGTTGTGGATCATGATGCTTGTTTCTTTTCAGGTCACATACTATTTCAGAAAGCCTTGTGCGAACGATATCGTGATATTTAAAAGCCCACCAGTGCTTCAGGAAGTAGGATATACAGATGAAGATGTCTTCATTAAAAGAGTTGTTGCTAAAGGAGGTGATACTGTGGAGGTCAGATTTACTAACGAGACCTTTTTTGTTTGTATCATTATCTGATATGTGTAATGGAGCCATTGATTTAGATCATCAAGAACAGATATCTATCTGTTTTTCAATGATATTGCAGGGTTCAAAAATGTAAATAACCGAATCTATCAGATGATCTAATTTTCTTGCACAACTTTAGTTAAAAGTTTTATGGTCGTAATCTCCAGCTTTCATTTGTGTTTTCAAGCTCAAGAAACAGCTTCACTCTTCACTTGGAACATTCACTGATTGCAGGTCCGGAAGGGCAAACTTATTGTCAATGGGGTCGAGAGAGACGAAAAGTTTATCCTTGAACCACCATCATACGACATGACTCCGGTTGTAAGTAGTTCCTTCTGTTTTCTGCTTCCTGCTTCGGTTTCGCATCTTTCTAAGATTTTCCTACCAAAATTATGAACACACAAGAATTGAGTACAAGCTGTGATCGTTTTTCCTTTTGGTTGAATGAAAGAGAGATTATTGCTTTTCCTTCAGTTTGTGAAATCTATATCAAGCATGGTTAAACATTACATCTCTTTCATTCTTATTTTGATGCAGCAAGTGCCAGAAAACTCGGTGTTTGTGATGGGCGATAATCGCAATAACAGCTATGATTCTCATGTGTGGTAAAGTCTTTCACTCATCACTTCACTAATACTGGGTTTAAGATGACTTTAAAAAGATGTGTATTTAAGTAAAAGACTTATGTTCAAATAAGCAACGATCTTGACAGTAGACTTCTATGTGCTTGTCTTTGAGTTTTTTTTCTTCCTTGTGCTGATAGCTAGCTACTACATATACCAAATTGTTCAGGGGTCCACTGCCAGCCAAAAATATAATAGGAAGATCATTATTCCGCTATTGGCCTCCGAACAGGATTGGTGGAACCGTTATCGAGCCTAGCTGTGCTACTGATAAACAAGAGGGCACTCCTTCCACACCAGAGATTTCCAGCCAACAGACCACAAATTCTCAACCGTAACAGTTTCGGTCATGTTCTTGTAAGTTCAGTTGGTTGTTCTGCAAATGCCTTATAGTTCCCATTCGCTCCCCTGTAATTTTGAAGCTCTTTTTTGTTGAATGAACTGGGCATTTTGTGCAAGGCCCTATTTACTGTTGATCTTGGTTTATGCAAGTTACTAGAGATGACTCTCAGTGTTGAGAGATCTGAACTAGTGACATTGCCATTCTTTGTGAACCCAATTGAACAGTACAAGCTAGTTATGATATAGGAATATGTGCTCTTGAAATTGAAAACTAGATAAATTGCTGCAGTAGATGTGATCAATACCATACAAGGAGGAGGTCGAATGTGCAAACCTTATGCTCCATCATGTCTGCAGATAAGTGAAGGTGTCTCATATGGCTTCTCCTGATATTTTTTATACTGATTCAAACATAATTTTATGGATACAATTCAATTACTATTATAACAAATTCAATCTTGTGTTTGTAATT

mRNA sequence

GGAACCCCAACAGCTTGAATTTGAAATTCATCACAGAGGCGCAATTCTGCCACAGAGGATGCCATCTCTTCATCTCCTCTCGTCAGTATCTTCTTTTGACAACCCTTCTCTACAACGTGCGCGCCTCTCGAAACCCGGTAACAGTTCTAATCCCCCAATTCATTCAAATGCCATTTCCCCAAAATTCGCACATGCCCACTTCGCCAATCGCTCTATTTCCCCTTCTGTAACTCTCAGTCAATTGCGTACTCAATCCCGAAGCAGTGGTTTTCTACCCTTTAAGCCTCCAAACGATGGAGCCCACTGGAAGAGGTGTTACTGTAGTGCTGTTAATGACTCTGACGAGAAAACTAGGTCAGTTTTGGACTCCAGTGGCGGCGGTGATGGAGGTGAAGGCGGCGATGGAAGTGATGATAATGGGAAGGTGGATAAGCAAAAGGGTTCTTCTGGGTTTCTGCCGGAATGGTTGAATTTAACTTCGGACGACGCCAAAACGGTCCTTGCAGCCATTGCAATATCTCTTGCCTTCAGGACGTTTATTGCAGAACCGAGGTACATTCCGTCGCTATCAATGTATCCTACCTTTGATGTTGGGGATCGACTTGTAGCAGAGAAGGTCACATACTATTTCAGAAAGCCTTGTGCGAACGATATCGTGATATTTAAAAGCCCACCAGTGCTTCAGGAAGTAGGATATACAGATGAAGATGTCTTCATTAAAAGAGTTGTTGCTAAAGGAGGTGATACTGTGGAGGTCCGGAAGGGCAAACTTATTGTCAATGGGGTCGAGAGAGACGAAAAGTTTATCCTTGAACCACCATCATACGACATGACTCCGGTTCAAGTGCCAGAAAACTCGGTGTTTGTGATGGGCGATAATCGCAATAACAGCTATGATTCTCATGTGTGGGGTCCACTGCCAGCCAAAAATATAATAGGAAGATCATTATTCCGCTATTGGCCTCCGAACAGGATTGGTGGAACCGTTATCGAGCCTAGCTGTGCTACTGATAAACAAGAGGGCACTCCTTCCACACCAGAGATTTCCAGCCAACAGACCACAAATTCTCAACCGTAACAGTTTCGGTCATGTTCTTGTAAGTTCAGTTGGTTGTTCTGCAAATGCCTTATAGTTCCCATTCGCTCCCCTGTAATTTTGAAGCTCTTTTTTGTTGAATGAACTGGGCATTTTGTGCAAGGCCCTATTTACTGTTGATCTTGGTTTATGCAAGTTACTAGAGATGACTCTCAGTGTTGAGAGATCTGAACTAGTGACATTGCCATTCTTTGTGAACCCAATTGAACAGTACAAGCTAGTTATGATATAGGAATATGTGCTCTTGAAATTGAAAACTAGATAAATTGCTGCAGTAGATGTGATCAATACCATACAAGGAGGAGGTCGAATGTGCAAACCTTATGCTCCATCATGTCTGCAGATAAGTGAAGGTGTCTCATATGGCTTCTCCTGATATTTTTTATACTGATTCAAACATAATTTTATGGATACAATTCAATTACTATTATAACAAATTCAATCTTGTGTTTGTAATT

Coding sequence (CDS)

ATGCCATCTCTTCATCTCCTCTCGTCAGTATCTTCTTTTGACAACCCTTCTCTACAACGTGCGCGCCTCTCGAAACCCGGTAACAGTTCTAATCCCCCAATTCATTCAAATGCCATTTCCCCAAAATTCGCACATGCCCACTTCGCCAATCGCTCTATTTCCCCTTCTGTAACTCTCAGTCAATTGCGTACTCAATCCCGAAGCAGTGGTTTTCTACCCTTTAAGCCTCCAAACGATGGAGCCCACTGGAAGAGGTGTTACTGTAGTGCTGTTAATGACTCTGACGAGAAAACTAGGTCAGTTTTGGACTCCAGTGGCGGCGGTGATGGAGGTGAAGGCGGCGATGGAAGTGATGATAATGGGAAGGTGGATAAGCAAAAGGGTTCTTCTGGGTTTCTGCCGGAATGGTTGAATTTAACTTCGGACGACGCCAAAACGGTCCTTGCAGCCATTGCAATATCTCTTGCCTTCAGGACGTTTATTGCAGAACCGAGGTACATTCCGTCGCTATCAATGTATCCTACCTTTGATGTTGGGGATCGACTTGTAGCAGAGAAGGTCACATACTATTTCAGAAAGCCTTGTGCGAACGATATCGTGATATTTAAAAGCCCACCAGTGCTTCAGGAAGTAGGATATACAGATGAAGATGTCTTCATTAAAAGAGTTGTTGCTAAAGGAGGTGATACTGTGGAGGTCCGGAAGGGCAAACTTATTGTCAATGGGGTCGAGAGAGACGAAAAGTTTATCCTTGAACCACCATCATACGACATGACTCCGGTTCAAGTGCCAGAAAACTCGGTGTTTGTGATGGGCGATAATCGCAATAACAGCTATGATTCTCATGTGTGGGGTCCACTGCCAGCCAAAAATATAATAGGAAGATCATTATTCCGCTATTGGCCTCCGAACAGGATTGGTGGAACCGTTATCGAGCCTAGCTGTGCTACTGATAAACAAGAGGGCACTCCTTCCACACCAGAGATTTCCAGCCAACAGACCACAAATTCTCAACCGTAA

Protein sequence

MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLSQLRTQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGGDGGEGGDGSDDNGKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP

Homology

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BLAST of Carg12202 vs. NCBI nr
Match: XP_022933769.1 (chloroplast processing peptidase-like [Cucurbita moschata])

HSP 1 Score: 649.4 bits (1674), Expect = 6.6e-183
Identity = 332/339 (97.94%), Postives = 332/339 (97.94%), Query Frame = 0


Query: 1   MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLS 60
           MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLS
Sbjct: 1   MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLS 60

Query: 61  QLRTQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXXXXX 120
           QLR QSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGG  XXXXXXXX   
Sbjct: 61  QLRIQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGGDXXXXXXXXDDN 120

Query: 121 XKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGD 180
            KVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGD
Sbjct: 121 GKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGD 180

Query: 181 RLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIV 240
           RLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIV
Sbjct: 181 RLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIV 240

Query: 241 NGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRY 300
           NGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRY
Sbjct: 241 NGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRY 300

Query: 301 WPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP 340
           WPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP
Sbjct: 301 WPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP 339

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BLAST of Carg12202 vs. NCBI nr
Match: XP_023529432.1 (chloroplast processing peptidase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 635.6 bits (1638), Expect = 9.8e-179
Identity = 332/339 (97.94%), Postives = 334/339 (98.53%), Query Frame = 0


Query: 1   MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLS 60
           MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLS
Sbjct: 1   MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLS 60

Query: 61  QLRTQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXXXXX 120
           QLR QSRSS FLPFKPPNDGAHWKR YCSAVNDSDEKTRSVLDSSGGXXXXXXXXXXXXX
Sbjct: 61  QLRIQSRSSSFLPFKPPNDGAHWKRGYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXXXXX 120

Query: 121 XKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGD 180
           XKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGD
Sbjct: 121 XKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGD 180

Query: 181 RLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIV 240
           RLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIV
Sbjct: 181 RLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIV 240

Query: 241 NGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRY 300
           NGVERDEKFILEPPSYDMTPV+VPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRY
Sbjct: 241 NGVERDEKFILEPPSYDMTPVEVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRY 300

Query: 301 WPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP 340
           WPPNRIGGTVIEPSCA DKQEGTPSTPEISSQQT+ SQP
Sbjct: 301 WPPNRIGGTVIEPSCAADKQEGTPSTPEISSQQTSTSQP 339

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BLAST of Carg12202 vs. NCBI nr
Match: XP_022973164.1 (chloroplast processing peptidase-like [Cucurbita maxima])

HSP 1 Score: 629.0 bits (1621), Expect = 9.2e-177
Identity = 330/339 (97.35%), Postives = 332/339 (97.94%), Query Frame = 0


Query: 1   MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLS 60
           M SLHLLSSVSSFDNPSLQRARLSKPG SSNPPIHSNAISPKFAHAHFANRSISPSVTLS
Sbjct: 1   MLSLHLLSSVSSFDNPSLQRARLSKPGISSNPPIHSNAISPKFAHAHFANRSISPSVTLS 60

Query: 61  QLRTQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXXXXX 120
           QLR QSRSS FLPFKPPNDGAHWKR YCSAVNDSDEKTRSVLDS G XXXXXXXXXXXXX
Sbjct: 61  QLRIQSRSSSFLPFKPPNDGAHWKRGYCSAVNDSDEKTRSVLDSGGXXXXXXXXXXXXXX 120

Query: 121 XKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGD 180
           XKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGD
Sbjct: 121 XKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGD 180

Query: 181 RLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIV 240
           RLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIV
Sbjct: 181 RLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIV 240

Query: 241 NGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRY 300
           NGVERDEKF+LEPPSYDM+PVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRY
Sbjct: 241 NGVERDEKFVLEPPSYDMSPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRY 300

Query: 301 WPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP 340
           WPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP
Sbjct: 301 WPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP 339

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BLAST of Carg12202 vs. NCBI nr
Match: XP_022144864.1 (chloroplast processing peptidase [Momordica charantia])

HSP 1 Score: 517.7 bits (1332), Expect = 3.0e-143
Identity = 282/342 (82.46%), Postives = 297/342 (86.84%), Query Frame = 0


Query: 1   MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPI---HSNAISPKFAHAHFANRSISPSV 60
           M SLHLLSSV  FDN + QR R+SKP N+SN  I   HS AI+ KFAHA FA+R I P  
Sbjct: 1   MLSLHLLSSVPLFDNHAPQRTRVSKPNNTSNSSILSLHSIAIAQKFAHARFASRYIFPYA 60

Query: 61  TLSQLRTQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXX 120
              +   QS +S F  FKPP+DG H KR  C AVNDSDEKTRSVLD+   XXXXXXXXXX
Sbjct: 61  NCRKFSIQSGNSSFRAFKPPSDGTHSKRGRCGAVNDSDEKTRSVLDTXXXXXXXXXXXXX 120

Query: 121 XXXXKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFD 180
           XXXXKV+K+KGSSGFLPEWLNLTSDDAKTV AAIAISLAFRTFIAEPRYIPSLSMYPTFD
Sbjct: 121 XXXXKVEKEKGSSGFLPEWLNLTSDDAKTVFAAIAISLAFRTFIAEPRYIPSLSMYPTFD 180

Query: 181 VGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGK 240
           VGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAK GDTVEV+KGK
Sbjct: 181 VGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKEGDTVEVQKGK 240

Query: 241 LIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSL 300
           LIVNGVER EKFILEPPSY+MTPVQVP+NSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSL
Sbjct: 241 LIVNGVERSEKFILEPPSYNMTPVQVPKNSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSL 300

Query: 301 FRYWPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP 340
           FRYWPPNRIGGTV EPSCA DKQE  PSTPEISS QT+NSQP
Sbjct: 301 FRYWPPNRIGGTVSEPSCAVDKQESIPSTPEISSLQTSNSQP 342

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BLAST of Carg12202 vs. NCBI nr
Match: XP_008463398.1 (PREDICTED: chloroplast processing peptidase [Cucumis melo])

HSP 1 Score: 511.9 bits (1317), Expect = 1.6e-141
Identity = 283/342 (82.75%), Postives = 290/342 (84.80%), Query Frame = 0


Query: 1   MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPI---HSNAISPKFAHAHFANRSISPSV 60
           M S HL SS  SF N SLQR  L KP + S  PI   HS   SPKFAH HFANRSI    
Sbjct: 1   MLSFHLFSSAPSFHNTSLQRTGLPKPNSPSYLPILNLHSIPNSPKFAHTHFANRSI---- 60

Query: 61  TLSQLRTQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXX 120
                  QS +  FL FKPP+DG H KR  CSAVNDSDEKTRSVLD+   XXXXXXXXXX
Sbjct: 61  -------QSGTYSFLAFKPPSDGTHLKRGRCSAVNDSDEKTRSVLDTGXXXXXXXXXXXX 120

Query: 121 XXXXKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFD 180
           XXXXKV+ QK SSGFLPEWLNLTSDDAKTV AAIAISLAFRTFIAEPRYIPSLSMYPTFD
Sbjct: 121 XXXXKVENQKDSSGFLPEWLNLTSDDAKTVFAAIAISLAFRTFIAEPRYIPSLSMYPTFD 180

Query: 181 VGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGK 240
           VGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAK GDTVEVRKGK
Sbjct: 181 VGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKEGDTVEVRKGK 240

Query: 241 LIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSL 300
           LIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSL
Sbjct: 241 LIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSL 300

Query: 301 FRYWPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP 340
           FRYWPPNRIGGTV +PSCA DK+E  PSTPEISS QTTNSQP
Sbjct: 301 FRYWPPNRIGGTVSDPSCAIDKEESIPSTPEISSLQTTNSQP 331

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BLAST of Carg12202 vs. TAIR10
Match: AT3G24590.1 (plastidic type i signal peptidase 1)

HSP 1 Score: 339.0 bits (868), Expect = 3.5e-93
Identity = 158/187 (84.49%), Postives = 171/187 (91.44%), Query Frame = 0


Query: 134 PEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRK 193
           PEWL+ TSDDA+TV  AIA+SLAFR FIAEPRYIPSLSMYPTFDVGDRLVAEKV+YYFRK
Sbjct: 105 PEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRK 164

Query: 194 PCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVERDEKFILEP 253
           PCANDIVIFKSPPVLQEVGYTD DVFIKR+VAK GD VEV  GKL+VNGV R+EKFILEP
Sbjct: 165 PCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEP 224

Query: 254 PSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPNRIGGTVIEP 313
           P Y+MTP++VPENSVFVMGDNRNNSYDSHVWGPLP KNIIGRS+FRYWPPNR+ GTV+E 
Sbjct: 225 PGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRVSGTVLEG 284

Query: 314 SCATDKQ 321
            CA DKQ
Sbjct: 285 GCAVDKQ 291

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BLAST of Carg12202 vs. TAIR10
Match: AT1G06870.1 (Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 236.1 bits (601), Expect = 3.2e-62
Identity = 121/246 (49.19%), Postives = 157/246 (63.82%), Query Frame = 0


Query: 70  GFLPFK-----PPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXXXXXXKVD 129
           G  PFK     P   G+ W  C   A   +D     + +   G              KV 
Sbjct: 115 GISPFKTSSVIPFLRGSKWMPCSIPATLSTD-----IAEVDRGGKVCDPKVKLELSDKV- 174

Query: 130 KQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVA 189
              G +G++ + LN+ S+DAK    A+ +SL FR+ +AEP+ IPS SM PT DVGDR++A
Sbjct: 175 -SNGGNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIA 234

Query: 190 EKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVE 249
           EKV+Y+FRKP  +DIVIFK+PP+L E GY+  DVFIKR+VA  GD VEV  GKL+VN   
Sbjct: 235 EKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTV 294

Query: 250 RDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPN 309
           + E F+LEP  Y+M P+ VPE  VFV+GDNRN S+DSH WGPLP KNIIGRS+FRYWPP+
Sbjct: 295 QAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPS 353

Query: 310 RIGGTV 311
           ++   +
Sbjct: 355 KVSDII 353

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BLAST of Carg12202 vs. TAIR10
Match: AT2G30440.1 (thylakoid processing peptide)

HSP 1 Score: 236.1 bits (601), Expect = 3.2e-62
Identity = 108/193 (55.96%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 128 GSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKV 187
           G SG++ + L++ S+DAK    A+ +S+ FR+ +AEP+ IPS SMYPT D GDR++AEKV
Sbjct: 141 GGSGWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKV 200

Query: 188 TYYFRKPCANDIVIFKSPPVL---QEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVE 247
           +Y+FRKP  +DIVIFK+PP+L    E GY+  DVFIKR+VA  GD VEVR GKL VN + 
Sbjct: 201 SYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIV 260

Query: 248 RDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPN 307
           ++E F+LEP SY+M P+ VP+  VFV+GDNRN S+DSH WGPLP +NI+GRS+FRYWPP+
Sbjct: 261 QEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPS 320

Query: 308 RIGGTVIEPSCAT 318
           ++  T+      T
Sbjct: 321 KVSDTIYHDQAIT 333

[Close]

BLAST of Carg12202 vs. TAIR10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10
Identity = 47/145 (32.41%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 155 LAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYT 214
           L F  +   P  IP+L  +P+   G+ L+AE+++  ++KP   DIV+ +SP         
Sbjct: 37  LGFMAYAYGPSMIPTL--HPS---GNMLLAERISKRYQKPSRGDIVVIRSPE-------N 96

Query: 215 DEDVFIKRVVAKGGDTVEVRKGKLIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDN 274
                IKRVV   GD +       +++ V+ DE             + VP+  VFV GD 
Sbjct: 97  PNKTPIKRVVGVEGDCI-----SFVIDPVKSDES----------QTIVVPKGHVFVQGDY 154

Query: 275 RNNSYDSHVWGPLPAKNIIGRSLFR 300
            +NS DS  +GP+P   I GR L+R
Sbjct: 157 THNSRDSRNFGPVPYGLIQGRVLWR 154

[Close]

BLAST of Carg12202 vs. TAIR10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 62.8 bits (151), Expect = 4.8e-10
Identity = 45/148 (30.41%), Postives = 70/148 (47.30%), Query Frame = 0


Query: 155 LAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYT 214
           L F  +   P   P+L  +P+   G+ L+AE+++  ++KP   DIV+ +SP         
Sbjct: 37  LGFMAYAYGPSMTPTL--HPS---GNVLLAERISKRYQKPSRGDIVVIRSPE-------N 96

Query: 215 DEDVFIKRVVAKGGDTVEVRKGKLIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDN 274
                IKRV+   GD +       +++  + DE             + VP+  VFV GD 
Sbjct: 97  PNKTPIKRVIGIEGDCI-----SFVIDSRKSDES----------QTIVVPKGHVFVQGDY 156

Query: 275 RNNSYDSHVWGPLPAKNIIGRSLFRYWP 303
            +NS DS  +G +P   I GR L+R WP
Sbjct: 157 THNSRDSRNFGTVPYGLIQGRVLWRVWP 157

[Close]

BLAST of Carg12202 vs. Swiss-Prot
Match: sp|Q8H0W1|PLSP1_ARATH (Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 SV=2)

HSP 1 Score: 339.0 bits (868), Expect = 6.2e-92
Identity = 158/187 (84.49%), Postives = 171/187 (91.44%), Query Frame = 0


Query: 134 PEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRK 193
           PEWL+ TSDDA+TV  AIA+SLAFR FIAEPRYIPSLSMYPTFDVGDRLVAEKV+YYFRK
Sbjct: 105 PEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRK 164

Query: 194 PCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVERDEKFILEP 253
           PCANDIVIFKSPPVLQEVGYTD DVFIKR+VAK GD VEV  GKL+VNGV R+EKFILEP
Sbjct: 165 PCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILEP 224

Query: 254 PSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPNRIGGTVIEP 313
           P Y+MTP++VPENSVFVMGDNRNNSYDSHVWGPLP KNIIGRS+FRYWPPNR+ GTV+E 
Sbjct: 225 PGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRVSGTVLEG 284

Query: 314 SCATDKQ 321
            CA DKQ
Sbjct: 285 GCAVDKQ 291

[Close]

BLAST of Carg12202 vs. Swiss-Prot
Match: sp|O04348|TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP1 PE=2 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 5.7e-61
Identity = 108/193 (55.96%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 128 GSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKV 187
           G SG++ + L++ S+DAK    A+ +S+ FR+ +AEP+ IPS SMYPT D GDR++AEKV
Sbjct: 141 GGSGWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKV 200

Query: 188 TYYFRKPCANDIVIFKSPPVL---QEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVE 247
           +Y+FRKP  +DIVIFK+PP+L    E GY+  DVFIKR+VA  GD VEVR GKL VN + 
Sbjct: 201 SYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIV 260

Query: 248 RDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPN 307
           ++E F+LEP SY+M P+ VP+  VFV+GDNRN S+DSH WGPLP +NI+GRS+FRYWPP+
Sbjct: 261 QEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPS 320

Query: 308 RIGGTVIEPSCAT 318
           ++  T+      T
Sbjct: 321 KVSDTIYHDQAIT 333

[Close]

BLAST of Carg12202 vs. Swiss-Prot
Match: sp|Q9M9Z2|TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP2 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.7e-61
Identity = 121/246 (49.19%), Postives = 157/246 (63.82%), Query Frame = 0


Query: 70  GFLPFK-----PPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXXXXXXKVD 129
           G  PFK     P   G+ W  C   A   +D     + +   G              KV 
Sbjct: 115 GISPFKTSSVIPFLRGSKWMPCSIPATLSTD-----IAEVDRGGKVCDPKVKLELSDKV- 174

Query: 130 KQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVA 189
              G +G++ + LN+ S+DAK    A+ +SL FR+ +AEP+ IPS SM PT DVGDR++A
Sbjct: 175 -SNGGNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIA 234

Query: 190 EKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVE 249
           EKV+Y+FRKP  +DIVIFK+PP+L E GY+  DVFIKR+VA  GD VEV  GKL+VN   
Sbjct: 235 EKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTV 294

Query: 250 RDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPN 309
           + E F+LEP  Y+M P+ VPE  VFV+GDNRN S+DSH WGPLP KNIIGRS+FRYWPP+
Sbjct: 295 QAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPS 353

Query: 310 RIGGTV 311
           ++   +
Sbjct: 355 KVSDII 353

[Close]

BLAST of Carg12202 vs. Swiss-Prot
Match: sp|P72660|LEP1_SYNY3 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB1 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.5e-45
Identity = 88/175 (50.29%), Postives = 117/175 (66.86%), Query Frame = 0


Query: 133 LPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFR 192
           +P       ++   ++ A+ ++L  R F+AEPRYIPS SM PT + GDRLV EKV+Y+F 
Sbjct: 6   IPSPWQFIKENIPLLMVALVLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFH 65

Query: 193 KPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVERDEKFILE 252
            P   DI++F  P +LQ  GY     FIKRV+A  G TVEV  G +  +G    E++ILE
Sbjct: 66  PPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILE 125

Query: 253 PPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPNRIG 308
           PP Y++  V+VP+  VFVMGDNRNNS DSHVWG LP +NIIG +LFR++P +R G
Sbjct: 126 PPQYNLPAVRVPDGQVFVMGDNRNNSNDSHVWGFLPQQNIIGHALFRFFPASRWG 180

[Close]

BLAST of Carg12202 vs. Swiss-Prot
Match: sp|Q51876|LEP_PHOLA (Signal peptidase I OS=Phormidium laminosum OX=32059 GN=lepB PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 9.1e-43
Identity = 79/170 (46.47%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 145 KTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRKPCANDIVIFKS 204
           KT+  ++ ++L  RTF+AE RYIPS SM PT +V DRL+ EK++Y+F  P   DI++F  
Sbjct: 33  KTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHP 92

Query: 205 PPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVERDEKFILEPPSYDMTPVQVP 264
              L++   +  + FIKRV+   G+TV+V  G++++NG   +E +I  PP Y   P +VP
Sbjct: 93  TEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVP 152

Query: 265 ENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPNRIGGTVIEPS 315
            +S  V+GDNRNNSYDSH WG +P +NIIGR++ R+WP NR+G     PS
Sbjct: 153 ADSFLVLGDNRNNSYDSHFWGYVPRQNIIGRAVVRFWPVNRLGELGPPPS 202

[Close]

BLAST of Carg12202 vs. TrEMBL
Match: tr|A0A1S3CJ67|A0A1S3CJ67_CUCME (chloroplast processing peptidase OS=Cucumis melo OX=3656 GN=LOC103501565 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.1e-141
Identity = 283/342 (82.75%), Postives = 290/342 (84.80%), Query Frame = 0


Query: 1   MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPI---HSNAISPKFAHAHFANRSISPSV 60
           M S HL SS  SF N SLQR  L KP + S  PI   HS   SPKFAH HFANRSI    
Sbjct: 1   MLSFHLFSSAPSFHNTSLQRTGLPKPNSPSYLPILNLHSIPNSPKFAHTHFANRSI---- 60

Query: 61  TLSQLRTQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXX 120
                  QS +  FL FKPP+DG H KR  CSAVNDSDEKTRSVLD+   XXXXXXXXXX
Sbjct: 61  -------QSGTYSFLAFKPPSDGTHLKRGRCSAVNDSDEKTRSVLDTGXXXXXXXXXXXX 120

Query: 121 XXXXKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFD 180
           XXXXKV+ QK SSGFLPEWLNLTSDDAKTV AAIAISLAFRTFIAEPRYIPSLSMYPTFD
Sbjct: 121 XXXXKVENQKDSSGFLPEWLNLTSDDAKTVFAAIAISLAFRTFIAEPRYIPSLSMYPTFD 180

Query: 181 VGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGK 240
           VGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAK GDTVEVRKGK
Sbjct: 181 VGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKEGDTVEVRKGK 240

Query: 241 LIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSL 300
           LIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSL
Sbjct: 241 LIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSL 300

Query: 301 FRYWPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQTTNSQP 340
           FRYWPPNRIGGTV +PSCA DK+E  PSTPEISS QTTNSQP
Sbjct: 301 FRYWPPNRIGGTVSDPSCAIDKEESIPSTPEISSLQTTNSQP 331

[Close]

BLAST of Carg12202 vs. TrEMBL
Match: tr|A0A2I4DI99|A0A2I4DI99_9ROSI (chloroplast processing peptidase-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108980416 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.2e-101
Identity = 214/330 (64.85%), Postives = 242/330 (73.33%), Query Frame = 0


Query: 4   LHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLSQLR 63
           LH+L    SF NP+       KP      PI             F  R  SP+   S   
Sbjct: 7   LHVLPPSPSFQNPTFPSTVFLKPTKYLYFPI-------------FNLRPNSPTYFAS--- 66

Query: 64  TQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSS-------GGXXXXXXXXX 123
             S++  FL F+  N   H++  +C A  DS E T +VL+S          XXXXXXXXX
Sbjct: 67  -ISKTPNFLGFRLQNHKTHFQSLHCYAFKDSAEDTNAVLESGXXXXXXXXXXXXXXXXXX 126

Query: 124 XXXXXKVDKQKGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTF 183
           XXXXX+V+K+ G SG LP+WLNLTSDDAKTV  A+A+SLAFR+F+AEPRYIPSLSMYPTF
Sbjct: 127 XXXXXQVEKKSGGSGPLPDWLNLTSDDAKTVFVALAVSLAFRSFVAEPRYIPSLSMYPTF 186

Query: 184 DVGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKG 243
           DVGDR+VAEKV+YYFRKPCANDIVIFKSPPVLQEVGYTD+DVFIKRVVAK GD VEVRKG
Sbjct: 187 DVGDRIVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVRKG 246

Query: 244 KLIVNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRS 303
           KLIVNG+ER E FI EPPSYDMTP++VPEN VFVMGDNRNNSYDSHVWGPLPAKNIIGRS
Sbjct: 247 KLIVNGIERRENFINEPPSYDMTPIRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRS 306

Query: 304 LFRYWPPNRIGGTVIEPSCATDKQEGTPST 327
           + RYWPPNRIGGTV+E  CA D Q+  P T
Sbjct: 307 VLRYWPPNRIGGTVLEAGCAVDMQKSGPVT 319

[Close]

BLAST of Carg12202 vs. TrEMBL
Match: tr|M5VQK4|M5VQK4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G232700 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.2e-101
Identity = 202/294 (68.71%), Postives = 229/294 (77.89%), Query Frame = 0


Query: 31  NPPIHSNAISPKFAHAHFANRSISPSVTLSQLRTQSRSSGFLPFKPPNDGAHWKRCYCSA 90
           +PP+ S   +P F H HF+     P+  +  L   S            +  H+K+  C+A
Sbjct: 7   SPPL-SPLQNPNFNHTHFSTPIKIPNFRVLNLHPLSXXXXXXXXXXXXNKTHFKKLACNA 66

Query: 91  VNDSDEKTRSVLDSSGGXXXXXXXXXXXXXXKVDKQKGSSGFLPEWLNLTSDDAKTVLAA 150
           + DS E+T++V D    XXXXXXXXXXXXXX        SG  PEWLN+T+DDAKTV AA
Sbjct: 67  LKDSGEETKAVSDXXXXXXXXXXXXXXXXXXXXXXXXXXSGPFPEWLNITTDDAKTVFAA 126

Query: 151 IAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQE 210
           IA+SLAFR+FIAEPRYIPSLSMYPT DVGDR+VAEKVTYYFRKPCAND+VIFKSPPVLQ+
Sbjct: 127 IAVSLAFRSFIAEPRYIPSLSMYPTLDVGDRIVAEKVTYYFRKPCANDVVIFKSPPVLQQ 186

Query: 211 VGYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVERDEKFILEPPSYDMTPVQVPENSVFV 270
           VGYTD DVFIKRVVAK GD VEVR GKLIVNGVER+EKFILEPPSY+MTP++VPENSVFV
Sbjct: 187 VGYTDYDVFIKRVVAKEGDIVEVRNGKLIVNGVERNEKFILEPPSYNMTPIRVPENSVFV 246

Query: 271 MGDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPNRIGGTVIEPSCATDKQEGTP 325
           MGDNRNNSYDSHVWGPLPAKNI+GRSLFRYWPP RIG TV+E  CA DKQE  P
Sbjct: 247 MGDNRNNSYDSHVWGPLPAKNILGRSLFRYWPPKRIGATVLETGCAADKQESVP 299

[Close]

BLAST of Carg12202 vs. TrEMBL
Match: tr|A0A2P5BM86|A0A2P5BM86_9ROSA (Peptidase S26A, signal peptidase I OS=Trema orientalis OX=63057 GN=TorRG33x02_316140 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.3e-98
Identity = 211/335 (62.99%), Postives = 247/335 (73.73%), Query Frame = 0


Query: 1   MPSLHLLSSVSSFDNPSLQRARLSKPGNSSNPPIHSNAISPKFAHAHFANRSISPSVTLS 60
           M S+H+   + S   P+      SKP N       S++ +    H H  + SISP  T  
Sbjct: 1   MVSVHVFYPLPSVKIPNSSHTHFSKPIN-----YPSSSFTALHLHLHQPS-SISPHSTY- 60

Query: 61  QLRTQSRSSGFLPFKPPNDGAHWKRCYCSAVNDSDEKTRSVLDSSGGXXXXXXXXXXXXX 120
                  +S F   K  N   H+    C+A  DS ++T++V+D+   XXXXXXXXXXXXX
Sbjct: 61  ------ETSTFSGSKLLNTRTHFHILRCNAFKDSGDETKAVVDTGXXXXXXXXXXXXXXX 120

Query: 121 XKVDKQ-KGSSGFLPEWLNLTSDDAKTVLAAIAISLAFRTFIAEPRYIPSLSMYPTFDVG 180
           X      +  SG L EW+N TSDDAKTV AAIAIS+AFR+F+AEPRYIPSLSMYPTFDVG
Sbjct: 121 XXXXXXVEKKSGLLSEWVNFTSDDAKTVFAAIAISIAFRSFVAEPRYIPSLSMYPTFDVG 180

Query: 181 DRLVAEKVTYYFRKPCANDIVIFKSPPVLQEVGYTDEDVFIKRVVAKGGDTVEVRKGKLI 240
           D LVAEKV+YYFRKPCANDIVIFKSPP LQ+VGYTD+DVFIKRVVAK GD VEVR GKL+
Sbjct: 181 DHLVAEKVSYYFRKPCANDIVIFKSPPALQQVGYTDDDVFIKRVVAKEGDIVEVRNGKLV 240

Query: 241 VNGVERDEKFILEPPSYDMTPVQVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSLFR 300
           VNGVERDEKFILEPPSY+M+P++VPENSVFVMGDNRNNSYDSHVWGPLPAKNI+GRS+FR
Sbjct: 241 VNGVERDEKFILEPPSYNMSPIRVPENSVFVMGDNRNNSYDSHVWGPLPAKNILGRSVFR 300

Query: 301 YWPPNRIGGTVIEPSCATDKQEGTPSTPEISSQQT 335
           YWPPNRIGGTV+E  CA DKQE    T  ++ Q+T
Sbjct: 301 YWPPNRIGGTVLETGCAVDKQE----TALVNKQET 318

[Close]

BLAST of Carg12202 vs. TrEMBL
Match: tr|A0A2P6RJD9|A0A2P6RJD9_ROSCH (Putative signal peptidase I OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0090191 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.3e-98
Identity = 203/295 (68.81%), Postives = 233/295 (78.98%), Query Frame = 0


Query: 32  PPIHSNAISPKFAHAHFANRSISPSVTLSQLRTQSRSSGFLPFKPPNDGAHWKRCYCSAV 91
           PP+ S   +P   H HF+    +P+ T   LR  S++    P    +   H+++  CSA+
Sbjct: 8   PPLPS-LQNPNPDHTHFSIPIKNPNFTSLNLRPLSKT----PNSKLSIKTHFRKLVCSAL 67

Query: 92  NDSDEKTRSVLDSSGGXXXXXXXXXXXXXXKVDKQKGSSGFLPEWLNLTSDDAKTVLAAI 151
            DS ++ +  LDS  GXXXXXXXXXXXXXX        SG LPEWLN+T+DDAKTV AAI
Sbjct: 68  KDSGKEKKVSLDS--GXXXXXXXXXXXXXXXXXXXXXKSGPLPEWLNITTDDAKTVFAAI 127

Query: 152 AISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVTYYFRKPCANDIVIFKSPPVLQEV 211
           A+SLAFR+FIAEPR+IPSLSMYPT DVGDR+VAEKV+YYFRKPCANDIVIFKSPPVLQEV
Sbjct: 128 AVSLAFRSFIAEPRFIPSLSMYPTLDVGDRIVAEKVSYYFRKPCANDIVIFKSPPVLQEV 187

Query: 212 GYTDEDVFIKRVVAKGGDTVEVRKGKLIVNGVERDEKFILEPPSYDMTPVQVPENSVFVM 271
           GYTD DVFIKR+VAK GDTVEV  GKLIVNGVERDEKFILEPPSY+MTP+ VPENSVFVM
Sbjct: 188 GYTDLDVFIKRIVAKEGDTVEVHNGKLIVNGVERDEKFILEPPSYNMTPITVPENSVFVM 247

Query: 272 GDNRNNSYDSHVWGPLPAKNIIGRSLFRYWPPNRIGGTVIEPSCATDKQEGTPST 327
           GDNRNNSYDSHVWGPLPAKNI+GRS+FRYWP  RIG TV+E  CA DKQE  P++
Sbjct: 248 GDNRNNSYDSHVWGPLPAKNILGRSIFRYWPLKRIGATVLETGCAVDKQESVPAS 295

The following BLAST results are available for this feature:

BLAST of Carg12202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933769.1	6.6e-183	97.94	chloroplast processing peptidase-like [Cucurbita moschata]	[more]
XP_023529432.1	9.8e-179	97.94	chloroplast processing peptidase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973164.1	9.2e-177	97.35	chloroplast processing peptidase-like [Cucurbita maxima]	[more]
XP_022144864.1	3.0e-143	82.46	chloroplast processing peptidase [Momordica charantia]	[more]
XP_008463398.1	1.6e-141	82.75	PREDICTED: chloroplast processing peptidase [Cucumis melo]	[more]

BLAST of Carg12202 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24590.1	3.5e-93	84.49	plastidic type i signal peptidase 1	[more]
AT1G06870.1	3.2e-62	49.19	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT2G30440.1	3.2e-62	55.96	thylakoid processing peptide	[more]
AT1G23465.1	1.3e-10	32.41	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G29960.1	4.8e-10	30.41	Peptidase S24/S26A/S26B/S26C family protein	[more]

BLAST of Carg12202 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8H0W1\|PLSP1_ARATH	6.2e-92	84.49	Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 S...	[more]
sp\|O04348\|TPP1_ARATH	5.7e-61	55.96	Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q9M9Z2\|TPP2_ARATH	5.7e-61	49.19	Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|P72660\|LEP1_SYNY3	7.5e-45	50.29	Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX...	[more]
sp\|Q51876\|LEP_PHOLA	9.1e-43	46.47	Signal peptidase I OS=Phormidium laminosum OX=32059 GN=lepB PE=3 SV=1	[more]

BLAST of Carg12202 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJ67\|A0A1S3CJ67_CUCME	1.1e-141	82.75	chloroplast processing peptidase OS=Cucumis melo OX=3656 GN=LOC103501565 PE=4 SV...	[more]
tr\|A0A2I4DI99\|A0A2I4DI99_9ROSI	3.2e-101	64.85	chloroplast processing peptidase-like isoform X1 OS=Juglans regia OX=51240 GN=LO...	[more]
tr\|M5VQK4\|M5VQK4_PRUPE	4.2e-101	68.71	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G232700 PE=4 SV=1	[more]
tr\|A0A2P5BM86\|A0A2P5BM86_9ROSA	3.3e-98	62.99	Peptidase S26A, signal peptidase I OS=Trema orientalis OX=63057 GN=TorRG33x02_31...	[more]
tr\|A0A2P6RJD9\|A0A2P6RJD9_ROSCH	3.3e-98	68.81	Putative signal peptidase I OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0090191 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008236	serine-type peptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036286	LexA/Signal_pep-like_sf
IPR019757	Pept_S26A_signal_pept_1_Lys-AS
IPR019758	Pept_S26A_signal_pept_1_CS
IPR019756	Pept_S26A_signal_pept_1_Ser-AS
IPR019533	Peptidase_S26
IPR000223	Pept_S26A_signal_pept_1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008236	serine-type peptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12202-RA	Carg12202-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 160..176 score: 45.24 coord: 219..231 score: 53.66 coord: 263..282 score: 57.86
IPR000223	Peptidase S26A, signal peptidase I	TIGRFAM	TIGR02227	TIGR02227	coord: 145..303 e-value: 1.7E-39 score: 133.3
None	No IPR available	GENE3D	G3DSA:2.10.109.10		coord: 169..300 e-value: 3.0E-34 score: 119.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..339
None	No IPR available	PANTHER	PTHR43390	FAMILY NOT NAMED	coord: 47..316
None	No IPR available	PANTHER	PTHR43390:SF2	THYLAKOIDAL PROCESSING PEPTIDASE 1, CHLOROPLASTIC-RELATED	coord: 47..316
None	No IPR available	CDD	cd06530	S26_SPase_I	coord: 163..295 e-value: 5.23323E-25 score: 95.7303
IPR019533	Peptidase S26	PFAM	PF10502	Peptidase_S26	coord: 196..295 e-value: 2.8E-13 score: 49.7
IPR019756	Peptidase S26A, signal peptidase I, serine active site	PROSITE	PS00501	SPASE_I_1	coord: 169..176
IPR019758	Peptidase S26A, signal peptidase I, conserved site	PROSITE	PS00761	SPASE_I_3	coord: 268..281
IPR019757	Peptidase S26A, signal peptidase I, lysine active site	PROSITE	PS00760	SPASE_I_2	coord: 221..233
IPR036286	LexA/Signal peptidase-like superfamily	SUPERFAMILY	SSF51306	LexA/Signal peptidase	coord: 158..309

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12202	Cla010650	Watermelon (97103) v1	carwmB0039
Carg12202	MELO3C025353	Melon (DHL92) v3.5.1	carmeB0035
Carg12202	ClCG06G008640	Watermelon (Charleston Gray)	carwcgB0040
Carg12202	CmaCh11G006140	Cucurbita maxima (Rimu)	carcmaB0047
Carg12202	CmaCh10G006230	Cucurbita maxima (Rimu)	carcmaB0044
Carg12202	CmoCh10G006590	Cucurbita moschata (Rifu)	carcmoB0047
Carg12202	Lsi06G008660	Bottle gourd (USVL1VR-Ls)	carlsiB037
Carg12202	Cp4.1LG18g04250	Cucurbita pepo (Zucchini)	carcpeB0053
Carg12202	Cp4.1LG04g09950	Cucurbita pepo (Zucchini)	carcpeB0054
Carg12202	CsGy1G016830	Cucumber (Gy14) v2	carcgybB0035
Carg12202	MELO3C025353.2	Melon (DHL92) v3.6.1	carmedB0036
Carg12202	CsaV3_1G025510	Cucumber (Chinese Long) v3	carcucB0037
Carg12202	Cla97C06G118380	Watermelon (97103) v2	carwmbB0034
Carg12202	Bhi02G000956	Wax gourd	carwgoB0043

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12202	Carg09849	Silver-seed gourd	carcarB041

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12202	Silver-seed gourd	carcarB046
Carg12202	Silver-seed gourd	carcarB042
Carg12202	Silver-seed gourd	carcarB044
Carg12202	Silver-seed gourd	carcarB045
Carg12202	Silver-seed gourd	carcarB047
Carg12202	Cucumber (Gy14) v2	carcgybB0041
Carg12202	Cucumber (Gy14) v1	carcgyB0040
Carg12202	Cucurbita maxima (Rimu)	carcmaB0048
Carg12202	Cucurbita maxima (Rimu)	carcmaB0049
Carg12202	Cucurbita moschata (Rifu)	carcmoB0050
Carg12202	Cucurbita moschata (Rifu)	carcmoB0051
Carg12202	Cucurbita moschata (Rifu)	carcmoB0052
Carg12202	Cucurbita pepo (Zucchini)	carcpeB0049
Carg12202	Cucurbita pepo (Zucchini)	carcpeB0055
Carg12202	Wild cucumber (PI 183967)	carcpiB0044
Carg12202	Wild cucumber (PI 183967)	carcpiB0045
Carg12202	Cucumber (Chinese Long) v2	carcuB0042
Carg12202	Cucumber (Chinese Long) v3	carcucB0045
Carg12202	Cucumber (Chinese Long) v3	carcucB0047
Carg12202	Bottle gourd (USVL1VR-Ls)	carlsiB033
Carg12202	Melon (DHL92) v3.5.1	carmeB0039
Carg12202	Melon (DHL92) v3.6.1	carmedB0040
Carg12202	Watermelon (Charleston Gray)	carwcgB0037
Carg12202	Watermelon (97103) v1	carwmB0038
Carg12202	Watermelon (97103) v2	carwmbB0031
Carg12202	Watermelon (97103) v2	carwmbB0040
Carg12202	Wax gourd	carwgoB0038