Carg12100 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12100
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	blue-light photoreceptor PHR2
Location	Cucurbita_argyrosperma_scaffold_037 : 1222502 .. 1225045 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACTGACTCCACCAACCCACCCCCTCAAATCCTCTCATACGCAGCCCGCGGCGCAAATTTGTTGAGAGCGCCTCAAAATCTTATCTTCTTCCCCGTCTTTCAAGCTTCAATCATGGATCCCAACCCCCAAATCCTTGAAAATCCTGAACCCATCTCATCGGAGGACCAGTCTCCGCCCGTTCCAGTTCACTCGCCGCCGTTTGCCGTCGCTTCTCTCACTTTATCTCTCTCAACCGTCATTCCCTCAAATTTTCTTGTCCAACCCAGATTTTCTGGGTTGTTTTCTCGGCAGCCAAACAAGGATAATGTCCCCACTCAAGCTGCTTCTCTTTCTCACTTACCCATTTCCTGTTCTTCGCTCTGTCCCCCTAAAATCTCCCTCAAATCCACCGTTTCTGCTAACCCTCTTCAAATCCCTCTCTCTTTAGGCCCCCGCCGCCCTTCAGAACCCTCCAATGGCGCCGGGATGCGTCGAGCTACCATCGTTTGGTTCCGTAACGATCTACGGATTCACGATAATGAATGCCTAAATTCAGCTAATAATGATTCCATCTCCGTTTTGCCTGTTTACTGTTTCGATCCGAGAGATTACGGTAAGTCTTCGTCTGGATTCGATAAAACTGGACCGTACCGAGCCACATTTGTGATTGAATCCGTCTCGGATTTGCGGAAGAATCTCCAAGCTAGGGGTTCTAATCTCGTCGTTCGAATTGGAAAACCTGAAACTGTTCTTGCTGAATTGGCTAAGGAAATTGGTGCTGATGGAATTTATGCTCATTACGAGGTTTCTCACGATGAAATGGAGACTGAGGAGCGGATTGAGAGTGCGATGAAGGAAGAGAATGTTGAGGTTAAGTACTTTTGGGGAAGCACTTTGTATCATATCGATGATTTGCCGTTCAAAATGGAAGATATGCCGTCGAGCCATGGGGCGTTTAGAGAGAGAGTTCAAGGGGTGAGTGTGAGGAAGACGATTGAAGCTTTGGATAAGATGAAGGGTTTGCCTTCTCGTGGTGATGTAGAGCCTGGGGATATCCCTTCTTTGTCTGAATTGGGTCTCAACCAACCTGTGGCTATGTCTAAGGTTTGTTCATCCTTCATTTCTACTTGAATTTCGTTTTGTTTTTGCTTCTTTGACCGAATTGGAGGGTTGTTCTGCTGTTGTTCTGCTGTTGTGTTCAATTGGGCTATCATATTTCAAGAAAATGCTTTAAGCTTTCTACTACTTCTTGGACATGACATTGATACTCATCCTGTTGTTATCGTAGTAGCAAAGAGGACTAACAATGATAGTATGTGCTCAAGATTAACTCAAAATCTGCTAGTTGAACTAAGTGGAAATGGTGCTCTCTTGAAAATGTATTAGTTTTGGCATGCCCTTTTTTGATTTGGACTATGATTGTTTGGGTTTTTCGTGCTGCAAATACATGTTCTAGATTGTTGTTCTTGAAACCATTTTAAGTTTTCACGAGTTGAACTGATTTCTAGAAGTTTAGCGTTGTCTTTTGTGAGATCCCACGTTGGTTGGGGAGGAGAACGAAGCACTCTTTATAAGGGTGTGGAAACTCCTCTCCCTAGTAGACGTGTTTTAAAAACCTTGAGGGGAATCTCGAAAGGAAAAGTCCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGGGCTGTTACTAATGGTATTAGAGCTAGACACTGGACAATGTACCAGTGAGGAGGCTGAGTCTCGAAGGAGGTGGACATGAGGCGGTGTGCCAACCAAAGACGCTGGGCTCTGAAGGGGGATGGATTAGGGCGTCCCACATTGATTGGAGAAGGGAATGAGTGCCAGCGAGGACACTGGGGCCGAAGGGGGTGGATTGTGACATCCCACATCGGTTGGGGAAGAGAACAAAGTATTCTTTGTAAGGAGGTGAAAACCTCTCCCTAGCGGATGTGTTTTAAAAACCTTGAGGGAAAGCCCGAAAGGAAAAGTCCAAAGAGGACAATATGAGTTCACGACTGAGAGAACAAATCATTTGATGACAATAGACCTTGCTCTGTGACATTTCACTCTTCACATATCTCTTCATATATTCTCTACTTTTCTTGAAATGTATCAACATTGTTAACTTCATCCTATAGGAAGGATGGCTAGCTCCCAATACTTCTCAAGTGGGAGGGGAGACCGAAGCGCTTCATAGGCTTCAAAAATACGCAGCTGAATGTCGAGCTCAACCACCGAAGGCGACGAACAACGGTGCTCCGAATAGCATATATGGTGCTACCTTTTCAAACAAAATTTCTCCGTGGCTAACCATGGGTTGCATTTCACCTCGATCGGTGTTCGATGAATTTAACAAAACCGTTTCCAGGTGCATATGAACGCCCACTGCCTTCATCGTTTTGTGGCAACATTGCCAAATCAAAGTTCTCAAAAACAAACATTAATCACTGAGATAATTTTCTTATGTGTGGAACCTTTTCTGGTAACAGGAAGCATGATAGTGGCAATGGCACTGGAACAAACTGGCTGATGTTTGAGTTATTATGGAGGGACTTCTTCAGGTAA

mRNA sequence

TCACTGACTCCACCAACCCACCCCCTCAAATCCTCTCATACGCAGCCCGCGGCGCAAATTTGTTGAGAGCGCCTCAAAATCTTATCTTCTTCCCCGTCTTTCAAGCTTCAATCATGGATCCCAACCCCCAAATCCTTGAAAATCCTGAACCCATCTCATCGGAGGACCAGTCTCCGCCCGTTCCAGTTCACTCGCCGCCGTTTGCCGTCGCTTCTCTCACTTTATCTCTCTCAACCGTCATTCCCTCAAATTTTCTTGTCCAACCCAGATTTTCTGGGTTGTTTTCTCGGCAGCCAAACAAGGATAATGTCCCCACTCAAGCTGCTTCTCTTTCTCACTTACCCATTTCCTGTTCTTCGCTCTGTCCCCCTAAAATCTCCCTCAAATCCACCGTTTCTGCTAACCCTCTTCAAATCCCTCTCTCTTTAGGCCCCCGCCGCCCTTCAGAACCCTCCAATGGCGCCGGGATGCGTCGAGCTACCATCGTTTGGTTCCGTAACGATCTACGGATTCACGATAATGAATGCCTAAATTCAGCTAATAATGATTCCATCTCCGTTTTGCCTGTTTACTGTTTCGATCCGAGAGATTACGGTAAGTCTTCGTCTGGATTCGATAAAACTGGACCGTACCGAGCCACATTTGTGATTGAATCCGTCTCGGATTTGCGGAAGAATCTCCAAGCTAGGGGTTCTAATCTCGTCGTTCGAATTGGAAAACCTGAAACTGTTCTTGCTGAATTGGCTAAGGAAATTGGTGCTGATGGAATTTATGCTCATTACGAGGTTTCTCACGATGAAATGGAGACTGAGGAGCGGATTGAGAGTGCGATGAAGGAAGAGAATGTTGAGGTTAAGTACTTTTGGGGAAGCACTTTGTATCATATCGATGATTTGCCGTTCAAAATGGAAGATATGCCGTCGAGCCATGGGGCGTTTAGAGAGAGAGTTCAAGGGGTGAGTGTGAGGAAGACGATTGAAGCTTTGGATAAGATGAAGGGTTTGCCTTCTCGTGGTGATGTAGAGCCTGGGGATATCCCTTCTTTGTCTGAATTGGGTCTCAACCAACCTGTGGCTATGTCTAAGACCGAAGCGCTTCATAGGCTTCAAAAATACGCAGCTGAATGTCGAGCTCAACCACCGAAGGCGACGAACAACGGTGCTCCGAATAGCATATATGGTGCTACCTTTTCAAACAAAATTTCTCCGTGGCTAACCATGGGTTGCATTTCACCTCGATCGGTGTTCGATGAATTTAACAAAACCGTTTCCAGGAAGCATGATAGTGGCAATGGCACTGGAACAAACTGGCTGATGTTTGAGTTATTATGGAGGGACTTCTTCAGGTAA

Coding sequence (CDS)

ATGGATCCCAACCCCCAAATCCTTGAAAATCCTGAACCCATCTCATCGGAGGACCAGTCTCCGCCCGTTCCAGTTCACTCGCCGCCGTTTGCCGTCGCTTCTCTCACTTTATCTCTCTCAACCGTCATTCCCTCAAATTTTCTTGTCCAACCCAGATTTTCTGGGTTGTTTTCTCGGCAGCCAAACAAGGATAATGTCCCCACTCAAGCTGCTTCTCTTTCTCACTTACCCATTTCCTGTTCTTCGCTCTGTCCCCCTAAAATCTCCCTCAAATCCACCGTTTCTGCTAACCCTCTTCAAATCCCTCTCTCTTTAGGCCCCCGCCGCCCTTCAGAACCCTCCAATGGCGCCGGGATGCGTCGAGCTACCATCGTTTGGTTCCGTAACGATCTACGGATTCACGATAATGAATGCCTAAATTCAGCTAATAATGATTCCATCTCCGTTTTGCCTGTTTACTGTTTCGATCCGAGAGATTACGGTAAGTCTTCGTCTGGATTCGATAAAACTGGACCGTACCGAGCCACATTTGTGATTGAATCCGTCTCGGATTTGCGGAAGAATCTCCAAGCTAGGGGTTCTAATCTCGTCGTTCGAATTGGAAAACCTGAAACTGTTCTTGCTGAATTGGCTAAGGAAATTGGTGCTGATGGAATTTATGCTCATTACGAGGTTTCTCACGATGAAATGGAGACTGAGGAGCGGATTGAGAGTGCGATGAAGGAAGAGAATGTTGAGGTTAAGTACTTTTGGGGAAGCACTTTGTATCATATCGATGATTTGCCGTTCAAAATGGAAGATATGCCGTCGAGCCATGGGGCGTTTAGAGAGAGAGTTCAAGGGGTGAGTGTGAGGAAGACGATTGAAGCTTTGGATAAGATGAAGGGTTTGCCTTCTCGTGGTGATGTAGAGCCTGGGGATATCCCTTCTTTGTCTGAATTGGGTCTCAACCAACCTGTGGCTATGTCTAAGACCGAAGCGCTTCATAGGCTTCAAAAATACGCAGCTGAATGTCGAGCTCAACCACCGAAGGCGACGAACAACGGTGCTCCGAATAGCATATATGGTGCTACCTTTTCAAACAAAATTTCTCCGTGGCTAACCATGGGTTGCATTTCACCTCGATCGGTGTTCGATGAATTTAACAAAACCGTTTCCAGGAAGCATGATAGTGGCAATGGCACTGGAACAAACTGGCTGATGTTTGAGTTATTATGGAGGGACTTCTTCAGGTAA

Protein sequence

MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQPNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMRRATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIESVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAMKEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSRGDVEPGDIPSLSELGLNQPVAMSKTEALHRLQKYAAECRAQPPKATNNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLWRDFFR

Homology

[Close]

BLAST of Carg12100 vs. NCBI nr
Match: XP_022960062.1 (blue-light photoreceptor PHR2 [Cucurbita moschata])

HSP 1 Score: 813.1 bits (2099), Expect = 4.2e-232
Identity = 406/425 (95.53%), Postives = 408/425 (96.00%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60
           MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ
Sbjct: 1   MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60

Query: 61  PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120
           PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR
Sbjct: 61  PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120

Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180
           RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE
Sbjct: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180

Query: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240
           SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM
Sbjct: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240

Query: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSR 300
           KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQG+SVRKTIEALDKMKGLPSR
Sbjct: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGLSVRKTIEALDKMKGLPSR 300

Query: 301 GDVEPGDIPSLSELGLNQPVAMSK--------------TEALHRLQKYAAECRAQPPKAT 360
           GDVEPGDIPSLSELGLNQPVAMSK              TEALHRLQKYAAECR+QPPKAT
Sbjct: 301 GDVEPGDIPSLSELGLNQPVAMSKEGWLAPNTSQVGGETEALHRLQKYAAECRSQPPKAT 360

Query: 361 NNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLW 412
           NNGA NSIYGATFSNKISPWLTMGCISPRSVFDE NKTVSRKHD GNGTGTNWLMFELLW
Sbjct: 361 NNGAQNSIYGATFSNKISPWLTMGCISPRSVFDELNKTVSRKHDGGNGTGTNWLMFELLW 420

[Close]

BLAST of Carg12100 vs. NCBI nr
Match: XP_023514137.1 (blue-light photoreceptor PHR2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 808.1 bits (2086), Expect = 1.3e-230
Identity = 405/425 (95.29%), Postives = 406/425 (95.53%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60
           MDPN QILEN EPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ
Sbjct: 1   MDPNSQILENSEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60

Query: 61  PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120
           PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR
Sbjct: 61  PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120

Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180
           RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE
Sbjct: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180

Query: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240
           SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM
Sbjct: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240

Query: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSR 300
           KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQG+SVRKTIEALDKMKGLPSR
Sbjct: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGLSVRKTIEALDKMKGLPSR 300

Query: 301 GDVEPGDIPSLSELGLNQPVAMSK--------------TEALHRLQKYAAECRAQPPKAT 360
           GDVEPGDIPSLSELGLNQPVAMSK              TEALHRLQKYAAECRAQPPKAT
Sbjct: 301 GDVEPGDIPSLSELGLNQPVAMSKEGWLAPNTSQVGGETEALHRLQKYAAECRAQPPKAT 360

Query: 361 NNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLW 412
           NNGA NSIYGATFSNKISPWLTMGCISPRSVFDE NKTVSRKHD GNGTGTNWLMFELLW
Sbjct: 361 NNGAQNSIYGATFSNKISPWLTMGCISPRSVFDELNKTVSRKHDGGNGTGTNWLMFELLW 420

[Close]

BLAST of Carg12100 vs. NCBI nr
Match: XP_023004534.1 (blue-light photoreceptor PHR2 [Cucurbita maxima])

HSP 1 Score: 800.0 bits (2065), Expect = 3.7e-228
Identity = 402/425 (94.59%), Postives = 403/425 (94.82%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60
           MDPN QILENPE ISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ
Sbjct: 1   MDPNSQILENPESISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60

Query: 61  PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120
           P KDNVPTQAASLS LPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR
Sbjct: 61  PTKDNVPTQAASLSRLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120

Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180
           RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE
Sbjct: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180

Query: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240
           SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM
Sbjct: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240

Query: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSR 300
           KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQG+SVRKTIEALDKMKGLPSR
Sbjct: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGLSVRKTIEALDKMKGLPSR 300

Query: 301 GDVEPGDIPSLSELGLNQPVAMSK--------------TEALHRLQKYAAECRAQPPKAT 360
           GDVEPG IPSLSELGLNQPVAMSK              TEALHRLQKYAAECRAQPPKAT
Sbjct: 301 GDVEPGGIPSLSELGLNQPVAMSKEGWLAPNTSQVGGETEALHRLQKYAAECRAQPPKAT 360

Query: 361 NNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLW 412
           NNGA NSIYGATFSNKISPWLTMGCISPRSVFDE NKTVSRKHD GNGTGTNWLMFELLW
Sbjct: 361 NNGAQNSIYGATFSNKISPWLTMGCISPRSVFDELNKTVSRKHDGGNGTGTNWLMFELLW 420

[Close]

BLAST of Carg12100 vs. NCBI nr
Match: XP_004136025.1 (PREDICTED: blue-light photoreceptor PHR2 [Cucumis sativus] >KGN44944.1 DNA photolyase [Cucumis sativus])

HSP 1 Score: 756.9 bits (1953), Expect = 3.6e-215
Identity = 375/425 (88.24%), Postives = 394/425 (92.71%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60
           MDPN  ILENPEP SS+DQ+P +P+HS P AVASLTLSLST IPSNFLVQP+FSGLFSRQ
Sbjct: 1   MDPNSLILENPEPNSSDDQTPAIPLHSTPLAVASLTLSLSTAIPSNFLVQPKFSGLFSRQ 60

Query: 61  PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120
           PNKD VPTQA+SLS LPISCSSLCPPKISLKS +SANPLQIPLSLGPRRPSEPSNGAG+R
Sbjct: 61  PNKDEVPTQASSLSRLPISCSSLCPPKISLKSNISANPLQIPLSLGPRRPSEPSNGAGIR 120

Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180
           RATIVWFRNDLR+ DNECLNSA++DS+SVLPVYCFDPRDYGKSSSGFDKTGP+RA FVIE
Sbjct: 121 RATIVWFRNDLRLQDNECLNSAHDDSMSVLPVYCFDPRDYGKSSSGFDKTGPFRAAFVIE 180

Query: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240
           SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGAD +YAHYEVSHDEMETEERIESAM
Sbjct: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADAVYAHYEVSHDEMETEERIESAM 240

Query: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSR 300
           KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRE+VQG+SVRKTIEALDKMKGLPSR
Sbjct: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFREKVQGLSVRKTIEALDKMKGLPSR 300

Query: 301 GDVEPGDIPSLSELGLNQPVAMSK--------------TEALHRLQKYAAECRAQPPKAT 360
           GDVEPGDIPSLS+LGLNQPVAMSK              TEALHRLQKYAAECRAQPPKAT
Sbjct: 301 GDVEPGDIPSLSDLGLNQPVAMSKEGWLAPNTSQVGGETEALHRLQKYAAECRAQPPKAT 360

Query: 361 NNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLW 412
           NNG  +SIYGATFSNKISPWLTMGCISPRSVFDE NKTVSRK+D GNGTGTNWLMFELLW
Sbjct: 361 NNGVQSSIYGATFSNKISPWLTMGCISPRSVFDELNKTVSRKNDGGNGTGTNWLMFELLW 420

[Close]

BLAST of Carg12100 vs. NCBI nr
Match: XP_008451564.1 (PREDICTED: blue-light photoreceptor PHR2 [Cucumis melo])

HSP 1 Score: 747.7 bits (1929), Expect = 2.2e-212
Identity = 369/425 (86.82%), Postives = 390/425 (91.76%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60
           M+PN QILENPEP SS+DQ+P +P  S P AVASLTLSLST IPSNF VQP+ SGLFSRQ
Sbjct: 1   MNPNSQILENPEPNSSDDQTPAIPCRSTPLAVASLTLSLSTAIPSNFFVQPKISGLFSRQ 60

Query: 61  PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120
           PNKD VPTQA+SLS LPISCSSLCPPKISLKS +SANPLQIPLSLGPRRPSEPSNGAG+R
Sbjct: 61  PNKDEVPTQASSLSRLPISCSSLCPPKISLKSNISANPLQIPLSLGPRRPSEPSNGAGIR 120

Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180
           RATIVWFRNDLR+HDNECLNSA++DS+SVLPVYCFDPRDYGKSSSGFDKTGP+RA FVI+
Sbjct: 121 RATIVWFRNDLRLHDNECLNSAHDDSMSVLPVYCFDPRDYGKSSSGFDKTGPFRAAFVIQ 180

Query: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240
           SVSDLRKNLQARGSNLVVRIGKPETVL ELAKEIGAD +YAHYEVSHDEMETEERIESAM
Sbjct: 181 SVSDLRKNLQARGSNLVVRIGKPETVLVELAKEIGADAVYAHYEVSHDEMETEERIESAM 240

Query: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSR 300
           KEEN+EVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRE+VQG+SVRKTIEALDKMKGLPSR
Sbjct: 241 KEENIEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFREKVQGLSVRKTIEALDKMKGLPSR 300

Query: 301 GDVEPGDIPSLSELGLNQPVAMSK--------------TEALHRLQKYAAECRAQPPKAT 360
           GDVEPGDIPSLS+LGLNQPVAMSK              TEALHRLQKYAAECRAQPPKAT
Sbjct: 301 GDVEPGDIPSLSDLGLNQPVAMSKEGWLAPNTSQVGGETEALHRLQKYAAECRAQPPKAT 360

Query: 361 NNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLW 412
            NG  +SIYGATFSNKISPWLTMGCISPRSVFDE NKTVSRK+D GNGTGTNWLMFELLW
Sbjct: 361 TNGVQSSIYGATFSNKISPWLTMGCISPRSVFDELNKTVSRKNDGGNGTGTNWLMFELLW 420

[Close]

BLAST of Carg12100 vs. TAIR10
Match: AT2G47590.1 (photolyase/blue-light receptor 2)

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-143
Identity = 262/419 (62.53%), Postives = 322/419 (76.85%), Query Frame = 0


Query: 10  NPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQPNKDNVPTQ 69
           NPE  S+E+Q+P    HS    +ASL+L   T+ PS+     +F  LF+  PNK  +PTQ
Sbjct: 11  NPETKSAEEQNPLAIFHS-SLPIASLSL---TLFPSS----TQFLKLFAHHPNKVKIPTQ 70

Query: 70  AASLSHLPISCSSLCP-PKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMRRATIVWFR 129
           A+SL+HL +S  S  P  +IS KST++ANPLQ PLS+ PRRP +PS+ A +RRA +VWFR
Sbjct: 71  ASSLTHLSLSSVSPFPSSRISFKSTIAANPLQSPLSIVPRRPVDPSSAAALRRAAVVWFR 130

Query: 130 NDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIESVSDLRKN 189
           NDLR+HDNECLNSAN++ +SVLPVYCFDPRDYGKSSSGFDKTGP+RA F+IESVS+LRKN
Sbjct: 131 NDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSELRKN 190

Query: 190 LQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAMKEENVEVK 249
           LQARGSNLVVR+GKPE VL ELAKEIGAD +YAH EVSHDE++ E +IE+AMKEE VEVK
Sbjct: 191 LQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMKEEGVEVK 250

Query: 250 YFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSRGDVEPGDI 309
           YFWGSTLYH+DDLPFK+ED+PS++GAF+++VQ + +RKTI ALD++K LPSRGDVE GDI
Sbjct: 251 YFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKLEIRKTIAALDQLKSLPSRGDVELGDI 310

Query: 310 PSLSELGLNQPVAMS----------KTEALHRLQKYAAECRAQPPKATNNGAPNSIYGAT 369
           PSL +LG++     S          +TEAL RL+ +AA+C+A+  K    G  NS++GA 
Sbjct: 311 PSLLDLGISPTPRTSQEGKPTMVGGETEALTRLKSFAADCQARLSKGNQKGGNNSVFGAN 370

Query: 370 FSNKISPWLTMGCISPRSVFDEFNKTVSRKHDS-----GNG-TGTNWLMFELLWRDFFR 412
           FS KISPWL MG ISPRS+FDE  KT+S    S     G G TG NWLM+ELLWRDFFR
Sbjct: 371 FSCKISPWLAMGSISPRSMFDELKKTISASTTSTTPRNGPGDTGLNWLMYELLWRDFFR 421

[Close]

BLAST of Carg12100 vs. TAIR10
Match: AT5G24850.1 (cryptochrome 3)

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-52
Identity = 119/314 (37.90%), Postives = 179/314 (57.01%), Query Frame = 0


Query: 110 PSEPSNGAGMRRATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSS-SGFD 169
           PS  S     +  TI+WFRNDLR+ DN+ L  A + S ++LPVYC DPR +  +    F 
Sbjct: 30  PSSSSVKRKGKGVTILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFP 89

Query: 170 KTGPYRATFVIESVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHD 229
           KTG  R  F++E + DLRKNL  RG NL++R GKPE +L  LAK+ GA  ++AH E   +
Sbjct: 90  KTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSE 149

Query: 230 EMETEERIESAMKE--ENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQG-VSVR 289
           E++ E  +   +K    + +++  WGST+YH DDLPF + D+P  +  FR+ V+   S+R
Sbjct: 150 EVDVERLVNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVEAKCSIR 209

Query: 290 KTIEALDKMKGLPSRGDVEPGDIPSLSELGLN-QPVAM------SKTEALHRLQKYA-AE 349
            +      +   PS  D   GD+P+L +LG+  Q V         ++  + R+ +Y   +
Sbjct: 210 SSTRIPLSLGPTPSVDDW--GDVPTLEKLGVEPQEVTRGMRFVGGESAGVGRVFEYFWKK 269

Query: 350 CRAQPPKATNNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGT 409
              +  K T NG    + G  +S K SPWL  GCISPR +++E  +   ++  + N   T
Sbjct: 270 DLLKVYKETRNG----MLGPDYSTKFSPWLAFGCISPRFIYEEVQR-YEKERVANN--ST 329

Query: 410 NWLMFELLWRDFFR 412
            W++FEL+WRD+FR
Sbjct: 330 YWVLFELIWRDYFR 334

[Close]

BLAST of Carg12100 vs. TAIR10
Match: AT3G15620.1 (DNA photolyase family protein)

HSP 1 Score: 95.9 bits (237), Expect = 6.2e-20
Identity = 85/305 (27.87%), Postives = 133/305 (43.61%), Query Frame = 0


Query: 123 TIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPR----DYGKSSSGFDKTGPYRATFV 182
           +++WFR  LR+HDN  L  A+  S  + PV+  DP     D    S G  + G  R  F+
Sbjct: 26  SLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRFL 85

Query: 183 IESVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIES 242
           +ES+ DL  +L+  GS L+V  G+P  VL    +E     +   Y+        + +++ 
Sbjct: 86  LESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVKD 145

Query: 243 AMKEENVEVKYFWGSTLYHIDDLPFKMEDMPS-SHGAFRERVQGVSVRKTIEALDKMKGL 302
                 VEV      TL++   +  K    P  S+ +F +     S  K+ E +     L
Sbjct: 146 YASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKS-ELVMSYSSL 205

Query: 303 PSRGDVEP---GDIPSLSELGLNQ-------PVAMSKTEALHRLQKYAAECRAQPPKATN 362
           P  GD+      ++PSL ELG          P    ++EAL RL K  ++          
Sbjct: 206 PPIGDIGNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKP 265

Query: 363 NGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVS--RKHDSGNGTGTNWLMFELL 411
            G P S +    +  +SP+L  GC+S R  +          +KH S   +    L+ +LL
Sbjct: 266 KGDP-SAFLKPATTVMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVS----LLGQLL 324

[Close]

BLAST of Carg12100 vs. TAIR10
Match: AT4G25290.1 (DNA photolyases;DNA photolyases)

HSP 1 Score: 66.2 bits (160), Expect = 5.2e-11
Identity = 42/158 (26.58%), Postives = 81/158 (51.27%), Query Frame = 0


Query: 124 IVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIESVS 183
           +VWF++DLR+ D+  L +A+    +V+P+Y  D R   + ++             I ++ 
Sbjct: 38  VVWFKHDLRVDDHPGLLAASKHR-AVIPLYVLDRRILSRYTTD-------TLELAIIALE 97

Query: 184 DLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAMKEE 243
           DLRK L+ +GSNL++R G  E V+ +L KE+ A  ++   EV +   E  + +++ ++  
Sbjct: 98  DLRKTLKKQGSNLMLRYGNAENVIEDLVKEVRAPFVFVEEEVEYHLCEVLDAVKNKLEGV 157

Query: 244 NVEVK----YFWGSTLYHIDDLPFKMEDMPSSHGAFRE 278
           ++  +      W +  Y   +L     D+P S   F++
Sbjct: 158 SLSGESPRIVAWRTPFYESQNL----TDLPQSWEEFKK 183

[Close]

BLAST of Carg12100 vs. TAIR10
Match: AT1G04400.2 (cryptochrome 2)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-08
Identity = 62/275 (22.55%), Postives = 122/275 (44.36%), Query Frame = 0


Query: 119 MRRATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRAT-- 178
           M + TIVWFR DLRI DN  L +A ++  SV PV+ + P + G+   G       RA+  
Sbjct: 3   MDKKTIVWFRRDLRIEDNPALAAAAHEG-SVFPVFIWCPEEEGQFYPG-------RASRW 62

Query: 179 FVIESVSDLRKNLQARGSNL-VVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEER 238
           ++ +S++ L ++L+A GS+L +++     + + +  +  GA  +  ++      +  +  
Sbjct: 63  WMKQSLAHLSQSLKALGSDLTLIKTHNTISAILDCIRVTGATKVVFNHLYDPVSLVRDHT 122

Query: 239 IESAMKEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMK 298
           ++  + E  + V+ + G  LY   ++  +     +S  ++ ++   +S+ +++      +
Sbjct: 123 VKEKLVERGISVQSYNGDLLYEPWEIYCEKGKPFTSFNSYWKKCLDMSI-ESVMLPPPWR 182

Query: 299 GLPSRGDVEPGDIPSLSELGLNQPVAMSKTEALHR------------LQKYAAECRAQPP 358
            +P     E     S+ ELGL           L R            L ++  +      
Sbjct: 183 LMPITAAAEAIWACSIEELGLENEAEKPSNALLTRAWSPGWSNADKLLNEFIEKQLIDYA 242

Query: 359 KATNNGAPNSIYGATFSNKISPWLTMGCISPRSVF 379
           K +     NS      ++ +SP+L  G IS R VF
Sbjct: 243 KNSKKVVGNS------TSLLSPYLHFGEISVRHVF 262

[Close]

BLAST of Carg12100 vs. Swiss-Prot
Match: sp|Q8LB72|PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana OX=3702 GN=PHR2 PE=2 SV=2)

HSP 1 Score: 506.5 bits (1303), Expect = 2.7e-142
Identity = 262/419 (62.53%), Postives = 322/419 (76.85%), Query Frame = 0


Query: 10  NPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQPNKDNVPTQ 69
           NPE  S+E+Q+P    HS    +ASL+L   T+ PS+     +F  LF+  PNK  +PTQ
Sbjct: 11  NPETKSAEEQNPLAIFHS-SLPIASLSL---TLFPSS----TQFLKLFAHHPNKVKIPTQ 70

Query: 70  AASLSHLPISCSSLCP-PKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMRRATIVWFR 129
           A+SL+HL +S  S  P  +IS KST++ANPLQ PLS+ PRRP +PS+ A +RRA +VWFR
Sbjct: 71  ASSLTHLSLSSVSPFPSSRISFKSTIAANPLQSPLSIVPRRPVDPSSAAALRRAAVVWFR 130

Query: 130 NDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIESVSDLRKN 189
           NDLR+HDNECLNSAN++ +SVLPVYCFDPRDYGKSSSGFDKTGP+RA F+IESVS+LRKN
Sbjct: 131 NDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSELRKN 190

Query: 190 LQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAMKEENVEVK 249
           LQARGSNLVVR+GKPE VL ELAKEIGAD +YAH EVSHDE++ E +IE+AMKEE VEVK
Sbjct: 191 LQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMKEEGVEVK 250

Query: 250 YFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSRGDVEPGDI 309
           YFWGSTLYH+DDLPFK+ED+PS++GAF+++VQ + +RKTI ALD++K LPSRGDVE GDI
Sbjct: 251 YFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKLEIRKTIAALDQLKSLPSRGDVELGDI 310

Query: 310 PSLSELGLNQPVAMS----------KTEALHRLQKYAAECRAQPPKATNNGAPNSIYGAT 369
           PSL +LG++     S          +TEAL RL+ +AA+C+A+  K    G  NS++GA 
Sbjct: 311 PSLLDLGISPTPRTSQEGKPTMVGGETEALTRLKSFAADCQARLSKGNQKGGNNSVFGAN 370

Query: 370 FSNKISPWLTMGCISPRSVFDEFNKTVSRKHDS-----GNG-TGTNWLMFELLWRDFFR 412
           FS KISPWL MG ISPRS+FDE  KT+S    S     G G TG NWLM+ELLWRDFFR
Sbjct: 371 FSCKISPWLAMGSISPRSMFDELKKTISASTTSTTPRNGPGDTGLNWLMYELLWRDFFR 421

[Close]

BLAST of Carg12100 vs. Swiss-Prot
Match: sp|Q7NMD1|CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=cry PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.8e-60
Identity = 125/304 (41.12%), Postives = 190/304 (62.50%), Query Frame = 0


Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180
           +  +VW+RNDLR+HD+E L SA + +  V+ +YCFDPR +GK+  GF+KTGP+RA F++E
Sbjct: 4   KTVLVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKAPFGFEKTGPFRARFLLE 63

Query: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240
           SV+DLR++L+  GS+L+VR G PE V+  L  E+    ++ H EV+ +E+  E  +++A+
Sbjct: 64  SVADLRRSLRQLGSDLLVRRGHPEEVIPALVSELEIAAVHYHGEVTSEELVVERDLQAAL 123

Query: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQ-GVSVRKTIEALDKMKGLPS 300
              NV V+ FWG+TL H DDLPF +E +P     FR++V+   ++   + A  K+  LP+
Sbjct: 124 APLNVPVRSFWGTTLVHPDDLPFAIEAIPELFTDFRKQVERSAAINPPLPAPAKLPPLPA 183

Query: 301 RGDVEPGDIPSLSELGLNQPVAMSK---------TEALHRLQKYA-AECRAQPPKATNNG 360
              V+PG+IP L++LGL  PV   +         T  L RL++Y   +   +  K T NG
Sbjct: 184 ---VDPGEIPQLADLGLESPVTDERAVLQFKGGETSGLARLEEYFWQKSLLKSYKQTRNG 243

Query: 361 APNSIYGATFSNKISPWLTMGCISPRSVFDEFN--KTVSRKHDSGNGTGTNWLMFELLWR 412
               + GA +S+K S WL +GC+S R + ++    +T   K+DS     T WL+FELLWR
Sbjct: 244 ----MLGADYSSKFSAWLALGCLSARYIHEQVQTYETKRIKNDS-----TYWLIFELLWR 295

[Close]

BLAST of Carg12100 vs. Swiss-Prot
Match: sp|Q4KML2|CRYD_DANRE (Cryptochrome DASH OS=Danio rerio OX=7955 GN=cry-dash PE=2 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 9.6e-55
Identity = 124/305 (40.66%), Postives = 175/305 (57.38%), Query Frame = 0


Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDY-GKSSSGFDKTGPYRATFVI 180
           R  I   RNDLR+HDNE  + A  ++  ++P+YCFDPR Y G     F KTGP+R  F++
Sbjct: 5   RTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFLL 64

Query: 181 ESVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYA-HYEVSHDEMETEERIES 240
           +SV DLR  L+  GS L+VR GKPE V+ EL K++G+    A H EV+ +E   EE+++ 
Sbjct: 65  DSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKSVEEKLKE 124

Query: 241 AMKEENVEVKYFWGSTLYHIDDLPFK-MEDMPSSHGAFRERVQGVS-VRKTIEALDKMKG 300
              +  V V+ FWGSTLYH DDLPF  +  +P  +  FR+ V+    VR  +   +++K 
Sbjct: 125 ICCQNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPVLSTPEQVKS 184

Query: 301 LPSRGDVEPGDIPSLSELGLNQPV---------AMSKTEALHRLQKYAAECRAQPPKATN 360
            PS   +E G IP+   LG  +P+            +TEAL RL+ Y  +  A    AT 
Sbjct: 185 PPS--GLEEGPIPTFDSLGQTEPLDDCRSAFPCRGGETEALARLKHYFWDTNA---VATY 244

Query: 361 NGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNK-TVSRKHDSGNGTGTNWLMFELLW 412
               N + G  FS K SPWL +GCISPR ++++  K  V R  +      T W++FELLW
Sbjct: 245 KETRNGMIGVDFSTKFSPWLALGCISPRYIYEQIKKYEVERTANQ----STYWVIFELLW 300

[Close]

BLAST of Carg12100 vs. Swiss-Prot
Match: sp|Q75WS4|CRYD_XENLA (Cryptochrome DASH OS=Xenopus laevis OX=8355 GN=cry-dash PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.1e-54
Identity = 120/305 (39.34%), Postives = 177/305 (58.03%), Query Frame = 0


Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDY-GKSSSGFDKTGPYRATFVI 180
           R  I   RNDLR+HDNE L+ A+ ++  ++P+YCFDPR Y G     F KTGP+R  F++
Sbjct: 6   RVIICLLRNDLRLHDNEVLHWAHRNADQIVPLYCFDPRHYVGTHYFNFPKTGPHRLKFLL 65

Query: 181 ESVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIG-ADGIYAHYEVSHDEMETEERIES 240
           ESV DLR  L+ +GSNL++R GKPE V+ +L K++G    +  H E + +E + E  ++ 
Sbjct: 66  ESVRDLRITLKKKGSNLLLRRGKPEEVIEDLVKQLGNVSAVTLHEEATKEETDVESAVKQ 125

Query: 241 AMKEENVEVKYFWGSTLYHIDDLPFK-MEDMPSSHGAFRERV--QGVSVRKTIEALDKMK 300
           A     ++ + FWGSTLYH +DLPF+ +  +P  +  FR+ V  QG  VR T +  DK+K
Sbjct: 126 ACTRLGIKYQTFWGSTLYHREDLPFRHISSLPDVYTQFRKAVETQG-KVRPTFQMPDKLK 185

Query: 301 GLPSRGDVEPGDIPSLSELGLNQPVAMSKT---------EALHRLQKYAAECRAQPPKAT 360
            LPS   +E G +PS  +     P+   +T         +AL RL+ Y  E       A+
Sbjct: 186 PLPS--GLEEGSVPSHEDFDQQDPLTDPRTAFPCSGGESQALQRLEHYFWETNL---VAS 245

Query: 361 NNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLW 412
                N + G  +S K +PWL +GC+SPR ++++  K    K  + N   T W++FELLW
Sbjct: 246 YKDTRNGLIGLDYSTKFAPWLALGCVSPRYIYEQIGK--YEKERTAN-QSTYWVIFELLW 301

[Close]

BLAST of Carg12100 vs. Swiss-Prot
Match: sp|P77967|CRYD_SYNY3 (Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=cry PE=1 SV=2)

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-51
Identity = 108/296 (36.49%), Postives = 175/296 (59.12%), Query Frame = 0


Query: 124 IVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIESVS 183
           +VWFRNDLR+HD+E L+ A    +++  VYC+DPR + ++  GF KTGP+R+ F+ +SV 
Sbjct: 9   LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQ 68

Query: 184 DLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAMKEE 243
           +L ++LQ  G+ L+V  G PE V+ ++AK+I A  IY H EV+ +E++ E  +   +   
Sbjct: 69  NLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTIL 128

Query: 244 NVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQ--GVSVRKTIEALDKMKGLPS-R 303
            +E K +WGSTL H +DLPF ++D+P     FR+ ++   +S+R    A  ++   P+ +
Sbjct: 129 GIEAKGYWGSTLCHPEDLPFSIQDLPDLFTKFRKDIEKKKISIRPCFFAPSQLLPSPNIK 188

Query: 304 GDVEPGDIPSLSELGLNQPVAMS----KTEALHRLQKYAAE-CRAQPPKATNNGAPNSIY 363
            ++         ++  +    ++    +T  L RLQ Y     R +  K T NG    + 
Sbjct: 189 LELTAPPPEFFPQINFDHRSVLAFQGGETAGLARLQDYFWHGDRLKDYKETRNG----MV 248

Query: 364 GATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLWRDFFR 412
           GA +S+K SPWL +GC+SPR ++ E  +    + +  +   T+WL+FELLWRDFFR
Sbjct: 249 GADYSSKFSPWLALGCLSPRFIYQEVKR---YEQERVSNDSTHWLIFELLWRDFFR 297

[Close]

BLAST of Carg12100 vs. TrEMBL
Match: tr|A0A0A0K7T5|A0A0A0K7T5_CUCSA (DNA photolyase OS=Cucumis sativus OX=3659 GN=Csa_7G397570 PE=4 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 2.3e-215
Identity = 375/425 (88.24%), Postives = 394/425 (92.71%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60
           MDPN  ILENPEP SS+DQ+P +P+HS P AVASLTLSLST IPSNFLVQP+FSGLFSRQ
Sbjct: 1   MDPNSLILENPEPNSSDDQTPAIPLHSTPLAVASLTLSLSTAIPSNFLVQPKFSGLFSRQ 60

Query: 61  PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120
           PNKD VPTQA+SLS LPISCSSLCPPKISLKS +SANPLQIPLSLGPRRPSEPSNGAG+R
Sbjct: 61  PNKDEVPTQASSLSRLPISCSSLCPPKISLKSNISANPLQIPLSLGPRRPSEPSNGAGIR 120

Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180
           RATIVWFRNDLR+ DNECLNSA++DS+SVLPVYCFDPRDYGKSSSGFDKTGP+RA FVIE
Sbjct: 121 RATIVWFRNDLRLQDNECLNSAHDDSMSVLPVYCFDPRDYGKSSSGFDKTGPFRAAFVIE 180

Query: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240
           SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGAD +YAHYEVSHDEMETEERIESAM
Sbjct: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADAVYAHYEVSHDEMETEERIESAM 240

Query: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSR 300
           KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRE+VQG+SVRKTIEALDKMKGLPSR
Sbjct: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFREKVQGLSVRKTIEALDKMKGLPSR 300

Query: 301 GDVEPGDIPSLSELGLNQPVAMSK--------------TEALHRLQKYAAECRAQPPKAT 360
           GDVEPGDIPSLS+LGLNQPVAMSK              TEALHRLQKYAAECRAQPPKAT
Sbjct: 301 GDVEPGDIPSLSDLGLNQPVAMSKEGWLAPNTSQVGGETEALHRLQKYAAECRAQPPKAT 360

Query: 361 NNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLW 412
           NNG  +SIYGATFSNKISPWLTMGCISPRSVFDE NKTVSRK+D GNGTGTNWLMFELLW
Sbjct: 361 NNGVQSSIYGATFSNKISPWLTMGCISPRSVFDELNKTVSRKNDGGNGTGTNWLMFELLW 420

[Close]

BLAST of Carg12100 vs. TrEMBL
Match: tr|A0A1S3BRT7|A0A1S3BRT7_CUCME (blue-light photoreceptor PHR2 OS=Cucumis melo OX=3656 GN=LOC103492807 PE=4 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 1.4e-212
Identity = 369/425 (86.82%), Postives = 390/425 (91.76%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPVHSPPFAVASLTLSLSTVIPSNFLVQPRFSGLFSRQ 60
           M+PN QILENPEP SS+DQ+P +P  S P AVASLTLSLST IPSNF VQP+ SGLFSRQ
Sbjct: 1   MNPNSQILENPEPNSSDDQTPAIPCRSTPLAVASLTLSLSTAIPSNFFVQPKISGLFSRQ 60

Query: 61  PNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGAGMR 120
           PNKD VPTQA+SLS LPISCSSLCPPKISLKS +SANPLQIPLSLGPRRPSEPSNGAG+R
Sbjct: 61  PNKDEVPTQASSLSRLPISCSSLCPPKISLKSNISANPLQIPLSLGPRRPSEPSNGAGIR 120

Query: 121 RATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATFVIE 180
           RATIVWFRNDLR+HDNECLNSA++DS+SVLPVYCFDPRDYGKSSSGFDKTGP+RA FVI+
Sbjct: 121 RATIVWFRNDLRLHDNECLNSAHDDSMSVLPVYCFDPRDYGKSSSGFDKTGPFRAAFVIQ 180

Query: 181 SVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIESAM 240
           SVSDLRKNLQARGSNLVVRIGKPETVL ELAKEIGAD +YAHYEVSHDEMETEERIESAM
Sbjct: 181 SVSDLRKNLQARGSNLVVRIGKPETVLVELAKEIGADAVYAHYEVSHDEMETEERIESAM 240

Query: 241 KEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGLPSR 300
           KEEN+EVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRE+VQG+SVRKTIEALDKMKGLPSR
Sbjct: 241 KEENIEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFREKVQGLSVRKTIEALDKMKGLPSR 300

Query: 301 GDVEPGDIPSLSELGLNQPVAMSK--------------TEALHRLQKYAAECRAQPPKAT 360
           GDVEPGDIPSLS+LGLNQPVAMSK              TEALHRLQKYAAECRAQPPKAT
Sbjct: 301 GDVEPGDIPSLSDLGLNQPVAMSKEGWLAPNTSQVGGETEALHRLQKYAAECRAQPPKAT 360

Query: 361 NNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSRKHDSGNGTGTNWLMFELLW 412
            NG  +SIYGATFSNKISPWLTMGCISPRSVFDE NKTVSRK+D GNGTGTNWLMFELLW
Sbjct: 361 TNGVQSSIYGATFSNKISPWLTMGCISPRSVFDELNKTVSRKNDGGNGTGTNWLMFELLW 420

[Close]

BLAST of Carg12100 vs. TrEMBL
Match: tr|M5W2M8|M5W2M8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G262000 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.1e-169
Identity = 303/434 (69.82%), Postives = 359/434 (82.72%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPVHS---PPFAVASLTLSLSTVIPSNFLVQPRFSGLF 60
           MDPN Q+ ENPE  SSE+ +    V S   PPFA ASL+LSLST++P++F  QP+ S LF
Sbjct: 1   MDPNLQVSENPESKSSEEPNSLAIVPSSSLPPFATASLSLSLSTILPTHFFQQPKVSTLF 60

Query: 61  SRQPNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGA 120
           S QPNK  VPTQA+SL+HL +S +++ PPK+S KST+SANPLQ PLSLGPRRP +PSNGA
Sbjct: 61  SSQPNKVKVPTQASSLAHLSLSTANVTPPKLSFKSTISANPLQNPLSLGPRRPLDPSNGA 120

Query: 121 GMRRATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATF 180
            +RRA+IVWFRNDLR+HDNECLNSANN+S+SVLPVYCFDPRDYGKSSSGFDKTGPYRA+F
Sbjct: 121 AIRRASIVWFRNDLRVHDNECLNSANNESMSVLPVYCFDPRDYGKSSSGFDKTGPYRASF 180

Query: 181 VIESVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIE 240
           ++ESVSDLRKNLQARGS+LVVRIGKPETVL ELAK IGAD IYAH EVSHDE++ E++IE
Sbjct: 181 LVESVSDLRKNLQARGSDLVVRIGKPETVLVELAKAIGADAIYAHREVSHDEVKAEDKIE 240

Query: 241 SAMKEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGL 300
           +AMKEENVEVKYFWGSTLYH+DDLPFK+E+MP+++G FRE+V+G+ VRKTIEAL++MKGL
Sbjct: 241 AAMKEENVEVKYFWGSTLYHMDDLPFKLEEMPTNYGGFREKVKGLEVRKTIEALEQMKGL 300

Query: 301 PSRGDVEPGDIPSLSELGLNQPVAMS--------------KTEALHRLQKYAAECRAQPP 360
           PSRGDVEPGDIPSL +LGLN    MS              + EAL RL+K+AAEC+AQPP
Sbjct: 301 PSRGDVEPGDIPSLMDLGLNPSATMSQDGRPAANASMVGGEAEALERLKKFAAECQAQPP 360

Query: 361 KATNNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSR------KHDSGNGTGT 412
           K+  +G+ +SIYGA FS KISPWL MGC+SPRS+FDE  KT +R      K D G G+G 
Sbjct: 361 KSGKDGSHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTANRTISASSKRDDG-GSGM 420

[Close]

BLAST of Carg12100 vs. TrEMBL
Match: tr|A0A251N3L6|A0A251N3L6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G262000 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.1e-169
Identity = 303/434 (69.82%), Postives = 359/434 (82.72%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPVHS---PPFAVASLTLSLSTVIPSNFLVQPRFSGLF 60
           MDPN Q+ ENPE  SSE+ +    V S   PPFA ASL+LSLST++P++F  QP+ S LF
Sbjct: 1   MDPNLQVSENPESKSSEEPNSLAIVPSSSLPPFATASLSLSLSTILPTHFFQQPKVSTLF 60

Query: 61  SRQPNKDNVPTQAASLSHLPISCSSLCPPKISLKSTVSANPLQIPLSLGPRRPSEPSNGA 120
           S QPNK  VPTQA+SL+HL +S +++ PPK+S KST+SANPLQ PLSLGPRRP +PSNGA
Sbjct: 61  SSQPNKVKVPTQASSLAHLSLSTANVTPPKLSFKSTISANPLQNPLSLGPRRPLDPSNGA 120

Query: 121 GMRRATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGPYRATF 180
            +RRA+IVWFRNDLR+HDNECLNSANN+S+SVLPVYCFDPRDYGKSSSGFDKTGPYRA+F
Sbjct: 121 AIRRASIVWFRNDLRVHDNECLNSANNESMSVLPVYCFDPRDYGKSSSGFDKTGPYRASF 180

Query: 181 VIESVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMETEERIE 240
           ++ESVSDLRKNLQARGS+LVVRIGKPETVL ELAK IGAD IYAH EVSHDE++ E++IE
Sbjct: 181 LVESVSDLRKNLQARGSDLVVRIGKPETVLVELAKAIGADAIYAHREVSHDEVKAEDKIE 240

Query: 241 SAMKEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALDKMKGL 300
           +AMKEENVEVKYFWGSTLYH+DDLPFK+E+MP+++G FRE+V+G+ VRKTIEAL++MKGL
Sbjct: 241 AAMKEENVEVKYFWGSTLYHMDDLPFKLEEMPTNYGGFREKVKGLEVRKTIEALEQMKGL 300

Query: 301 PSRGDVEPGDIPSLSELGLNQPVAMS--------------KTEALHRLQKYAAECRAQPP 360
           PSRGDVEPGDIPSL +LGLN    MS              + EAL RL+K+AAEC+AQPP
Sbjct: 301 PSRGDVEPGDIPSLMDLGLNPSATMSQDGRPAANASMVGGEAEALERLKKFAAECQAQPP 360

Query: 361 KATNNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSR------KHDSGNGTGT 412
           K+  +G+ +SIYGA FS KISPWL MGC+SPRS+FDE  KT +R      K D G G+G 
Sbjct: 361 KSGKDGSHDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTANRTISASSKRDDG-GSGM 420

[Close]

BLAST of Carg12100 vs. TrEMBL
Match: tr|A0A2I4GI95|A0A2I4GI95_9ROSI (blue-light photoreceptor PHR2-like OS=Juglans regia OX=51240 GN=LOC109008089 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 1.7e-165
Identity = 299/441 (67.80%), Postives = 356/441 (80.73%), Query Frame = 0


Query: 1   MDPNPQILENPEPISSEDQSPPVPV------HSPPFAVASLTLSLSTVIPSNFLVQPRFS 60
           MDPN QI ENPE  SSE+Q+P   V       S PFA ASL+LSL+T++P+ F +QP+  
Sbjct: 1   MDPNSQIHENPEMKSSEEQNPLAIVPSKDQTTSAPFATASLSLSLNTILPTPFSLQPKIY 60

Query: 61  GLFSRQPNKDNVPTQAASLSHLPISC--SSLCPPKISLKSTVSANPLQIPLSLGPRRPSE 120
            LFS QP+K  VPTQA+SLSHL ++   +S  P ++S KSTVSANPLQ PLSLGPRRP +
Sbjct: 61  SLFSHQPSKVKVPTQASSLSHLSLTATTNSPSPSRLSFKSTVSANPLQNPLSLGPRRPFD 120

Query: 121 PSNGAGMRRATIVWFRNDLRIHDNECLNSANNDSISVLPVYCFDPRDYGKSSSGFDKTGP 180
           PSNGAG+RRA IVWFRNDLR+HDNECLN+ANN+S+SVLPVYCFDPRDYGKSSSGFDKTGP
Sbjct: 121 PSNGAGLRRAAIVWFRNDLRVHDNECLNTANNESMSVLPVYCFDPRDYGKSSSGFDKTGP 180

Query: 181 YRATFVIESVSDLRKNLQARGSNLVVRIGKPETVLAELAKEIGADGIYAHYEVSHDEMET 240
           YRATF++ESVSDLRKNLQA+GS+L+VRIGKPETVL ELAKE+GAD +YAH EVSHDE++ 
Sbjct: 181 YRATFLVESVSDLRKNLQAKGSDLMVRIGKPETVLVELAKEVGADAVYAHREVSHDEVKA 240

Query: 241 EERIESAMKEENVEVKYFWGSTLYHIDDLPFKMEDMPSSHGAFRERVQGVSVRKTIEALD 300
           E RIE+AMKEENVEVKYFWGSTLYH+DDLPFK+EDMP+++G FRE+VQG+ VRKTIEALD
Sbjct: 241 EGRIEAAMKEENVEVKYFWGSTLYHLDDLPFKLEDMPANYGGFREKVQGLEVRKTIEALD 300

Query: 301 KMKGLPSRGDVEPGDIPSLSELGLNQPVAMS--------------KTEALHRLQKYAAEC 360
           ++KGLP+RGDVEPGDIPSL +LGLN    M+              +TEAL RL K+A EC
Sbjct: 301 QVKGLPARGDVEPGDIPSLVDLGLNPSATMAQDGKPAANASMVGGETEALQRLNKFAVEC 360

Query: 361 RAQPPKATNNGAPNSIYGATFSNKISPWLTMGCISPRSVFDEFNKTVSR-------KHDS 412
           +AQP K  ++G+ +SIYGA FS KISPWL MGC+SPRS+FDE  KT +R       ++D 
Sbjct: 361 QAQPHKGKSDGSSDSIYGANFSCKISPWLAMGCLSPRSMFDELKKTATRTISASSNRNDG 420

The following BLAST results are available for this feature:

BLAST of Carg12100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960062.1	4.2e-232	95.53	blue-light photoreceptor PHR2 [Cucurbita moschata]	[more]
XP_023514137.1	1.3e-230	95.29	blue-light photoreceptor PHR2 [Cucurbita pepo subsp. pepo]	[more]
XP_023004534.1	3.7e-228	94.59	blue-light photoreceptor PHR2 [Cucurbita maxima]	[more]
XP_004136025.1	3.6e-215	88.24	PREDICTED: blue-light photoreceptor PHR2 [Cucumis sativus] >KGN44944.1 DNA photo...	[more]
XP_008451564.1	2.2e-212	86.82	PREDICTED: blue-light photoreceptor PHR2 [Cucumis melo]	[more]

BLAST of Carg12100 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47590.1	1.5e-143	62.53	photolyase/blue-light receptor 2	[more]
AT5G24850.1	1.6e-52	37.90	cryptochrome 3	[more]
AT3G15620.1	6.2e-20	27.87	DNA photolyase family protein	[more]
AT4G25290.1	5.2e-11	26.58	DNA photolyases;DNA photolyases	[more]
AT1G04400.2	1.9e-08	22.55	cryptochrome 2	[more]

BLAST of Carg12100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LB72\|PHR2_ARATH	2.7e-142	62.53	Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana OX=3702 GN=PHR2 PE=2 SV=2	[more]
sp\|Q7NMD1\|CRYD_GLOVI	5.8e-60	41.12	Cryptochrome DASH OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=cry PE...	[more]
sp\|Q4KML2\|CRYD_DANRE	9.6e-55	40.66	Cryptochrome DASH OS=Danio rerio OX=7955 GN=cry-dash PE=2 SV=2	[more]
sp\|Q75WS4\|CRYD_XENLA	2.1e-54	39.34	Cryptochrome DASH OS=Xenopus laevis OX=8355 GN=cry-dash PE=2 SV=1	[more]
sp\|P77967\|CRYD_SYNY3	1.3e-51	36.49	Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=...	[more]

BLAST of Carg12100 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7T5\|A0A0A0K7T5_CUCSA	2.3e-215	88.24	DNA photolyase OS=Cucumis sativus OX=3659 GN=Csa_7G397570 PE=4 SV=1	[more]
tr\|A0A1S3BRT7\|A0A1S3BRT7_CUCME	1.4e-212	86.82	blue-light photoreceptor PHR2 OS=Cucumis melo OX=3656 GN=LOC103492807 PE=4 SV=1	[more]
tr\|M5W2M8\|M5W2M8_PRUPE	1.1e-169	69.82	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G262000 PE=4 SV=1	[more]
tr\|A0A251N3L6\|A0A251N3L6_PRUPE	1.1e-169	69.82	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G262000 PE=4 SV=1	[more]
tr\|A0A2I4GI95\|A0A2I4GI95_9ROSI	1.7e-165	67.80	blue-light photoreceptor PHR2-like OS=Juglans regia OX=51240 GN=LOC109008089 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036155	Crypto/Photolyase_N_sf
IPR036134	Crypto/Photolyase_FAD-like_sf
IPR006050	DNA_photolyase_N
IPR014729	Rossmann-like_a/b/a_fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12100-RA	Carg12100-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 107..252 e-value: 2.7E-51 score: 175.5
IPR006050	DNA photolyase, N-terminal	PFAM	PF00875	DNA_photolyase	coord: 123..281 e-value: 1.7E-42 score: 145.1
IPR006050	DNA photolyase, N-terminal	PROSITE	PS51645	PHR_CRY_ALPHA_BETA	coord: 121..255 score: 38.785
None	No IPR available	GENE3D	G3DSA:1.25.40.80		coord: 253..411 e-value: 5.3E-34 score: 119.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR11455:SF2	BLUE-LIGHT PHOTORECEPTOR PHR2	coord: 49..411
None	No IPR available	PANTHER	PTHR11455	CRYPTOCHROME	coord: 49..411
IPR036134	Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily	SUPERFAMILY	SSF48173	Cryptochrome/photolyase FAD-binding domain	coord: 325..411
IPR036155	Cryptochrome/photolyase, N-terminal domain superfamily	SUPERFAMILY	SSF52425	Cryptochrome/photolyase, N-terminal domain	coord: 122..294

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12100	Cla015072	Watermelon (97103) v1	carwmB0559
Carg12100	Csa7G397570	Cucumber (Chinese Long) v2	carcuB0594
Carg12100	MELO3C015998	Melon (DHL92) v3.5.1	carmeB0566
Carg12100	ClCG09G005840	Watermelon (Charleston Gray)	carwcgB0547
Carg12100	CSPI07G17510	Wild cucumber (PI 183967)	carcpiB0599
Carg12100	Cucsa.205530	Cucumber (Gy14) v1	carcgyB0640
Carg12100	CmaCh08G004260	Cucurbita maxima (Rimu)	carcmaB0792
Carg12100	CmaCh17G010840	Cucurbita maxima (Rimu)	carcmaB0787
Carg12100	CmoCh08G004200	Cucurbita moschata (Rifu)	carcmoB0771
Carg12100	CmoCh17G010590	Cucurbita moschata (Rifu)	carcmoB0767
Carg12100	Cp4.1LG12g05750	Cucurbita pepo (Zucchini)	carcpeB0801
Carg12100	Cp4.1LG17g07070	Cucurbita pepo (Zucchini)	carcpeB0803
Carg12100	CsGy7G015940	Cucumber (Gy14) v2	carcgybB0569
Carg12100	MELO3C015998.2	Melon (DHL92) v3.6.1	carmedB0572
Carg12100	CsaV3_7G029300	Cucumber (Chinese Long) v3	carcucB0601
Carg12100	Cla97C09G168330	Watermelon (97103) v2	carwmbB0590
Carg12100	Bhi09G000720	Wax gourd	carwgoB0673

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12100	Carg07170	Silver-seed gourd	carcarB130

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12100	Cucurbita maxima (Rimu)	carcmaB0786
Carg12100	Cucurbita moschata (Rifu)	carcmoB0766
Carg12100	Bottle gourd (USVL1VR-Ls)	carlsiB511