Carg12048 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTATCACGTGACTTCAAATCAACCAGTGAATGTGAAGCTCACTGTCGCTCATCGGCTGCCATTTCTCCACCTCGAGCATCCAATAAAAAGCGCCACCATGGATTGCTATTCCTACCAATTCTAATTCGTCCTGATCAAAGAGAAAAAAAGTTCGATCGGAATTCAATAAACAGAATCACAAGATAAAATCCGTCTCCCGTTTGATATGTGGAGCTTCTCAGCGCACTCCCATGGAGCATCTCTTCTAATTATCATCACCACTTCAAGTAAACCATCTCTTGTATCTCTTTGTATCTTCCCCATTTGATTCCCGATACAACTTTGGAGAATCGCGAATTGAATCTTTTGTTTTCTTAGATGGAAATGCGTTCTCTATCGACTAAAGAAATCCCTATTTGTATTGCGGCGAATTGAAACTCACGTTACTGTAATTTATTTCAGGTTTGCTTGGAGTTACATTTGGTGGAGAAGGGTTGTGTTCAGCGCCCTCCATTATCGATTCGGATGCCGATTCGAAGCCTTTGTATTATAAAGCGACCAATCCTACTCTTTCTCCTTCTCATCTGCAAGGTTGGTAATTTTGTATGGGGCTTTATGATCAAATGAACAGTTACAAAGACGTGGTGGGAAATTGTTCTTGTTATGAAGTGGATTTTGCAGAATTTCGGCATTTCCATTTGTTATTAGTTTGATCAAGTACTTAGTTCTGGGCGTGAAATTGAGTATTCAATTCATCTTATGTGGAGTATGCTGTTGCAATTTTCCAGTTTATTAATCACTCTCTGGCTTTTCTGATACAGTTTATGTGGTATAATGTTAGAATTTTCCCACTAGTTGATCTACACCTTATGAAAATTTGCTTAGAGTTCAATTCATGGTAACCACCTACCTAGAATTTAATACCTCATGCTTTCTTGACAACCAAATGTAGTGAAATCAAATGATTTTCTCGGGTGATCAGTGAAGGTATGCTCATAAATTTCAAAAGAAGGATAAAAAGAAAATAAAGAAGAATGTAGTTACTATTTGAACGAGATGGAGACTGCTTGAAACTAAGTAACATTTTTTAAAGTAAAACGAAATGTAGAAACGTATCCTACCAAAGCTCTAGAGATGTCTTAAGACTCTTAACAATGTTTTGATGACAACATTAAGAAATTAAGCGTCCCGTTTTTGTTTTAGATTGGCTTGTATTCTCCTTGTTTTCTTTCATTTGTTCTCAGTGGAGGTTTCGTTATTCATAAATTTAAGAAAAAAAAAAAATTACTAATGTCCATGTTTGGCTATCACCAGATCGTTATGTTTAATATTCTTATTCTGGTAAAGTGATCTTTATTTTTCAAGAATGTAACAGTAAAACAGGAACTTCTTCATTTAGGGACTTGGTTTGAATAATTTACAATAAAAATGTTATAACTACGTATTGCTATCTCGACTTCACTTGTTTCTTATATGCAGATTTGCCTGGTTACACTCGCAGTGTTTATAAAAGGGATCATGCCTTGATAACACCGGAAAGTCAAGTGTTCAGTCCTCTACCTGAGTGGTAATTTTGGTCATCATCTTACTTTTGAACATTCTTATTAACTATTCTTTGCAAGGCCTGAATTATTTTTTTCCCTTTGCAGGACTAAAACACTTGGCGCATATTTAATCACACCAGCACTTGGTGCACATTTTGTGATGTATCTTGCGCAGATGCAAGGTTTAGTTGAACTTTGCCACGAACCTTTACATAATGTGCATATATATACAACGAGTATTTTTTATAATATTTTATTCATATTTTCTGTATGAGCTGCAGAGAAATCAAAATCAGGATTGCCCCCACATGATGTTGAGAGGTGTACTTTCTTTTGCCTTCTTTATGTAGTCCCATTGCAGAGAAATTGATAATATTTACCTAATACCTATATCATGCAACTGACATTTCAAATTTTCATCCATGGTCTTCATACTAGATTTTTATTTGTTGTTCGAGGAGCAGTGAAACTTACCAATTCGTCAGGCATAAGTGAAAAACTTACGGTAAGACAGAGTTGTCAATTTACTTGTTCATATTTTTTCTCCAGTGTCAGATGCTTGCTTTGTAGTTAAGAATAAGATTTTATGGTTTATTTCCTAGAAATGTCTATAAGAGTCATTCTTCATAGTTCATACATTTGGATTTCATTTGATATTCTCAAGGCTGCAAATCAGCTCATACAAGAAAGGTTTGTGTTGAATAAAGTACCTAATTCCCTCATCATATTATTTCATTGTCCTGTTTGAATGGTTGGCTAGCATGAAGGCCGATGATTTGTTGCTAGTGAAGTTCACAGATAAGAACAGCACCCTGAATCTTATAGATCGAACATTGAAATACAAGTATATAAATAGATTCATTTTTATTCAATGGAAACAGTGATTTGTGCTCATGTAGACTGTCTGTTATGGTCGATAATTGGATTGTTTGCGGAGTGAAACTGCTCCCGTGATATGATCAATAGTCGAGAAGTCTGATGATATTTATGAATCTGTGAAATGAAGGTTGATTCATTTGCTTATCTACCTCCGAATTTCGACCATTCCGTGAAGTGTGACTCTTCTGCTACCCTTGTGGTTTTTGAAAGAAGGTTTGTTTCCACCTATTAACTATAATATACATGAAATGGCTTCACATTTGTGCACCAGTCATCTTCACTCCAGTTCATGATAAGCATTTATCAATACTTGCATCATGTATGTATTTGTTCTTTCACCTGAAACCAATGTTCTAAGAAATGATTATGAAACTGTTCAGTATATCTAGTGTCACATATATCACAGGAACTACTTCAATAACATTGCTAATAATTGGCTTATAAACAGCTCACCTCTCGTGACTTCGAATTGTCTCATTTAATCAGGTATGCTTCTCTGGAGAATCATCACCCCAACCAGATCATTGGTTCGACAGACAAGCAGCCCCTCCTCGAAACTCCTGGTGAGGTAAGCGAGGATGTTTCTCCTTGCTTTAGGAAGGTTAAAAGTTTCTTTTGGATAAGGAAACACAAATATTCATTGATAATATGCAACTTTACGAGTAAAGATGCAAGTTCTCAGTAAGAACTGCTATAGATTTAAACTTACAAAATTTAATAAACTATCCTTGGAACAAAGGTTCTTCTGAACATCTTATAGATATGTTCTTATATCATCCTACAATATATTTGAAAGTTCTTCCTTGTGTTGTATCACATTACAAGATCTTTCAACTTAGGAAGCTCCTTCCCATGTCCATGCCGTACGATTTCAATGTCCATGTAAGTTATGAGTTGCAATTGAAAGATTAGTTCTTTTATCTCGGTCATGAGCTTTCTCATAGTTATATTGAACATCTGTCCCACTAGGTCATGGATTTTGAGCCTGGGGAGTTTCTTAATGTGAAGGTAATTTCATGAAGTTCAAATCTTACATTTCTTAGCTTTGGTTGGTTTTAAACTTCCTTCTAATTATTCGGTTTATACGTTATTCGATGGAAAAATACATTCCTTTTAAATTGGATCTATGTTATGCCTCTTAATTATAGTTTTTGTTGAATGGTTGACAGGAGGTTCATTATAATCAGCATGGTTTGTTGCTCTTAGAGGGCCAGGGCATTTATCGTTTGGGCGAAAACTGGTAAATATTTCATTCCTCTTGCTCGGAGTTGATCGCCTTTCATATATATATATAAGCTTGAAACTAGTTTCACATTTTCTTGGGCAGAGCTGGAAATTTTCTTTGGGTGGGATAAATTTTTTATTTGAACCTCTCGTGCACATAAATCTTTTAAATTTGGTTAACTAGACAAAGTAAAGACATCTATCCTCAACCAAGAAAGAAGTTAGAAGTTGAAGTAAAAAAAAAAAAACATAGAAATCTTTTGGTTTTAAAAATTTAGGAGGGAAAATTAGAGACAAGATTTAGAACTAAGAGGGGCCCCGTGCTCTGCCCCTCTCCTTGTTTACTCCACTCTTCTCGACATCATCCATTCATCACAAAGTCCACCATATAACAAATAAATCAGCAAACAAACATGTATTTTAAATAGAAGATAGATATGCATAGCTTTTATCTTGTAAGATGCACTGTAGGGTTCTTATGACATGTGACTAAAATCAAAGAAATACAATTCATTTTTCCTTCTTGTTCAAAATATTTCTCATGGACTTCGCACTTGTTCTTATTATTGCTGTTCTTGTAGGTACCCTGTTCAATCTGGCGATGTCATTTGGATGGCTCCCTTTGTACCGCAATGGTTAGTCAAATGCATATATGTTAGACTTGTTCTTATTCATCCTCATTACAATATAGTGTAAACTAGGTTTGGGTTTAATATTATATGATCTTTTCAGGTATGCTGCACTCGGGAAAACACGAAGTCGCTATCTGTTGTACAAGGATACGAACCGTGACCCCCTTGATCACAAGTAGTATGTTGATGCAACATTATAAGATTACTATCATATGAACACAGTGAACTGGTAGGATTTATTTTAGATTGTTGAAATGGAATAGTGCATTCCCCCTGCAGACCCCTTTGATTTGAGTTACGTTTTTAAGGTTAGGCATACAATAAATACTTGTTGCAAATTTCATAGTCCATTCAATTCATATTGAATGACTTTTTTCTGCTAAAAATACTTCTTAAACATTTAAAAATT AATTATCACGTGACTTCAAATCAACCAGTGAATGTGAAGCTCACTGTCGCTCATCGGCTGCCATTTCTCCACCTCGAGCATCCAATAAAAAGCGCCACCATGGATTGCTATTCCTACCAATTCTAATTCGTCCTGATCAAAGAGAAAAAAAGTTCGATCGGAATTCAATAAACAGAATCACAAGATAAAATCCGTCTCCCGTTTGATATGTGGAGCTTCTCAGCGCACTCCCATGGAGCATCTCTTCTAATTATCATCACCACTTCAAGTTTGCTTGGAGTTACATTTGGTGGAGAAGGGTTGTGTTCAGCGCCCTCCATTATCGATTCGGATGCCGATTCGAAGCCTTTGTATTATAAAGCGACCAATCCTACTCTTTCTCCTTCTCATCTGCAAGATTTGCCTGGTTACACTCGCAGTGTTTATAAAAGGGATCATGCCTTGATAACACCGGAAAGTCAAGTGTTCAGTCCTCTACCTGAGTGGACTAAAACACTTGGCGCATATTTAATCACACCAGCACTTGGTGCACATTTTGTGATGTATCTTGCGCAGATGCAAGAGAAATCAAAATCAGGATTGCCCCCACATGATGTTGAGAGATTTTTATTTGTTGTTCGAGGAGCAGTGAAACTTACCAATTCGTCAGGCATAAGTGAAAAACTTACGGTTGATTCATTTGCTTATCTACCTCCGAATTTCGACCATTCCGTGAAGTGTGACTCTTCTGCTACCCTTGTGGTTTTTGAAAGAAGGTATGCTTCTCTGGAGAATCATCACCCCAACCAGATCATTGGTTCGACAGACAAGCAGCCCCTCCTCGAAACTCCTGGTGAGATCTTTCAACTTAGGAAGCTCCTTCCCATGTCCATGCCGTACGATTTCAATGTCCATGTCATGGATTTTGAGCCTGGGGAGTTTCTTAATGTGAAGGAGGTTCATTATAATCAGCATGGTTTGTTGCTCTTAGAGGGCCAGGGCATTTATCGTTTGGGCGAAAACTGGTACCCTGTTCAATCTGGCGATGTCATTTGGATGGCTCCCTTTGTACCGCAATGGTATGCTGCACTCGGGAAAACACGAAGTCGCTATCTGTTGTACAAGGATACGAACCGTGACCCCCTTGATCACAAGTAGTATGTTGATGCAACATTATAAGATTACTATCATATGAACACAGTGAACTGGTAGGATTTATTTTAGATTGTTGAAATGGAATAGTGCATTCCCCCTGCAGACCCCTTTGATTTGAGTTACGTTTTTAAGGTTAGGCATACAATAAATACTTGTTGCAAATTTCATAGTCCATTCAATTCATATTGAATGACTTTTTTCTGCTAAAAATACTTCTTAAACATTTAAAAATT ATGTGGAGCTTCTCAGCGCACTCCCATGGAGCATCTCTTCTAATTATCATCACCACTTCAAGTTTGCTTGGAGTTACATTTGGTGGAGAAGGGTTGTGTTCAGCGCCCTCCATTATCGATTCGGATGCCGATTCGAAGCCTTTGTATTATAAAGCGACCAATCCTACTCTTTCTCCTTCTCATCTGCAAGATTTGCCTGGTTACACTCGCAGTGTTTATAAAAGGGATCATGCCTTGATAACACCGGAAAGTCAAGTGTTCAGTCCTCTACCTGAGTGGACTAAAACACTTGGCGCATATTTAATCACACCAGCACTTGGTGCACATTTTGTGATGTATCTTGCGCAGATGCAAGAGAAATCAAAATCAGGATTGCCCCCACATGATGTTGAGAGATTTTTATTTGTTGTTCGAGGAGCAGTGAAACTTACCAATTCGTCAGGCATAAGTGAAAAACTTACGGTTGATTCATTTGCTTATCTACCTCCGAATTTCGACCATTCCGTGAAGTGTGACTCTTCTGCTACCCTTGTGGTTTTTGAAAGAAGGTATGCTTCTCTGGAGAATCATCACCCCAACCAGATCATTGGTTCGACAGACAAGCAGCCCCTCCTCGAAACTCCTGGTGAGATCTTTCAACTTAGGAAGCTCCTTCCCATGTCCATGCCGTACGATTTCAATGTCCATGTCATGGATTTTGAGCCTGGGGAGTTTCTTAATGTGAAGGAGGTTCATTATAATCAGCATGGTTTGTTGCTCTTAGAGGGCCAGGGCATTTATCGTTTGGGCGAAAACTGGTACCCTGTTCAATCTGGCGATGTCATTTGGATGGCTCCCTTTGTACCGCAATGGTATGCTGCACTCGGGAAAACACGAAGTCGCTATCTGTTGTACAAGGATACGAACCGTGACCCCCTTGATCACAAGTAG MWSFSAHSHGASLLIIITTSSLLGVTFGGEGLCSAPSIIDSDADSKPLYYKATNPTLSPSHLQDLPGYTRSVYKRDHALITPESQVFSPLPEWTKTLGAYLITPALGAHFVMYLAQMQEKSKSGLPPHDVERFLFVVRGAVKLTNSSGISEKLTVDSFAYLPPNFDHSVKCDSSATLVVFERRYASLENHHPNQIIGSTDKQPLLETPGEIFQLRKLLPMSMPYDFNVHVMDFEPGEFLNVKEVHYNQHGLLLLEGQGIYRLGENWYPVQSGDVIWMAPFVPQWYAALGKTRSRYLLYKDTNRDPLDHK
BLAST of Carg12048 vs. NCBI nr
Match: XP_022951741.1 ((S)-ureidoglycine aminohydrolase [Cucurbita moschata]) HSP 1 Score: 632.5 bits (1630), Expect = 7.6e-178 Identity = 303/308 (98.38%), Postives = 304/308 (98.70%), Query Frame = 0
BLAST of Carg12048 vs. NCBI nr
Match: XP_023539711.1 ((S)-ureidoglycine aminohydrolase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 631.7 bits (1628), Expect = 1.3e-177 Identity = 302/309 (97.73%), Postives = 304/309 (98.38%), Query Frame = 0
BLAST of Carg12048 vs. NCBI nr
Match: XP_023005481.1 ((S)-ureidoglycine aminohydrolase [Cucurbita maxima]) HSP 1 Score: 622.9 bits (1605), Expect = 6.0e-175 Identity = 298/309 (96.44%), Postives = 303/309 (98.06%), Query Frame = 0
BLAST of Carg12048 vs. NCBI nr
Match: XP_022155493.1 ((S)-ureidoglycine aminohydrolase [Momordica charantia]) HSP 1 Score: 586.3 bits (1510), Expect = 6.2e-164 Identity = 274/309 (88.67%), Postives = 295/309 (95.47%), Query Frame = 0
BLAST of Carg12048 vs. NCBI nr
Match: XP_004149339.1 (PREDICTED: (S)-ureidoglycine aminohydrolase [Cucumis sativus] >KGN56091.1 hypothetical protein Csa_3G073830 [Cucumis sativus]) HSP 1 Score: 583.6 bits (1503), Expect = 4.0e-163 Identity = 275/309 (89.00%), Postives = 290/309 (93.85%), Query Frame = 0
BLAST of Carg12048 vs. TAIR10
Match: AT4G17050.1 (ureidoglycine aminohydrolase) HSP 1 Score: 485.0 bits (1247), Expect = 3.6e-137 Identity = 224/293 (76.45%), Postives = 255/293 (87.03%), Query Frame = 0
BLAST of Carg12048 vs. Swiss-Prot
Match: sp|Q8GXV5|UGHY_ARATH ((S)-ureidoglycine aminohydrolase OS=Arabidopsis thaliana OX=3702 GN=UGLYAH PE=1 SV=1) HSP 1 Score: 485.0 bits (1247), Expect = 6.4e-136 Identity = 224/293 (76.45%), Postives = 255/293 (87.03%), Query Frame = 0
BLAST of Carg12048 vs. Swiss-Prot
Match: sp|Q7F1K9|UGHY_ORYSJ (Probable (S)-ureidoglycine aminohydrolase OS=Oryza sativa subsp. japonica OX=39947 GN=UGLYAH PE=1 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 4.3e-124 Identity = 208/301 (69.10%), Postives = 245/301 (81.40%), Query Frame = 0
BLAST of Carg12048 vs. Swiss-Prot
Match: sp|P75713|ALLE_ECOLI ((S)-ureidoglycine aminohydrolase OS=Escherichia coli (strain K12) OX=83333 GN=allE PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.9e-27 Identity = 77/259 (29.73%), Postives = 128/259 (49.42%), Query Frame = 0
BLAST of Carg12048 vs. TrEMBL
Match: tr|A0A0A0L7K1|A0A0A0L7K1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G073830 PE=4 SV=1) HSP 1 Score: 583.6 bits (1503), Expect = 2.7e-163 Identity = 275/309 (89.00%), Postives = 290/309 (93.85%), Query Frame = 0
BLAST of Carg12048 vs. TrEMBL
Match: tr|A0A0D2TB23|A0A0D2TB23_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G230800 PE=4 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 4.9e-141 Identity = 236/295 (80.00%), Postives = 266/295 (90.17%), Query Frame = 0
BLAST of Carg12048 vs. TrEMBL
Match: tr|A0A2P5Y2K6|A0A2P5Y2K6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA10780 PE=4 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 4.9e-141 Identity = 236/295 (80.00%), Postives = 266/295 (90.17%), Query Frame = 0
BLAST of Carg12048 vs. TrEMBL
Match: tr|A0A0B0PV98|A0A0B0PV98_GOSAR (Putative ylbA OS=Gossypium arboreum OX=29729 GN=F383_14213 PE=4 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 9.3e-140 Identity = 233/295 (78.98%), Postives = 265/295 (89.83%), Query Frame = 0
BLAST of Carg12048 vs. TrEMBL
Match: tr|A0A1U8NF77|A0A1U8NF77_GOSHI ((S)-ureidoglycine aminohydrolase OS=Gossypium hirsutum OX=3635 GN=LOC107946699 PE=4 SV=1) HSP 1 Score: 505.0 bits (1299), Expect = 1.2e-139 Identity = 234/295 (79.32%), Postives = 264/295 (89.49%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |