Carg11949 (gene) Silver-seed gourd

Overview
NameCarg11949
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUDP-glucuronate 4-epimerase
LocationCucurbita_argyrosperma_scaffold_037 : 26601 .. 27234 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAATCCCAATTCGTATGTTCATAGCAACATCGCCGGTTTAGTTACGCTCCTTGAGGCATGTAAATCGGCTAATCCACAACCGGCTGTGGTCTGGGCTTCTTCCAGTTCGGTTTACGGTTTGAACGAGAAAGTCCCCTTTTCCGAATCGGACCGAACCGACCAACCGGCGAGTCTACTACGCAGCCACAAAAAAAGCCGGAGAGGAAATCACTCACACTTATAATCACATCTATGGTTTGTCGATAACCGGGTTGAGATTCTTCACGGTTTACGGTCCATGGGGCCGACCGGACATGGCGTATTTTTCATTCACGAGGAATATTCTTCAAGGAAAACCGATTACGGTTTTTCGTGGGAAGAACCGGGTTGATTTAGCCAGGGATTTCACTTACATTGATGATATTGTGAAAGGGTGTTTGGGGTCGTTGGATACATCAGGGAAGAGCACCGGTTCAGGTGAAGAAAACCGGACCGGCGGCGTAGAGGATATTCAACTTGGGGAATACATCGCCGGTGACGGTGCCGACGTTGGTGAGTATATTGGAGAGGCATTTGAAGGTGAAGGCAAAAGAAAATGTGGTGGAAATGCCTGGAAACGGCGACGTTCCGTTTACTCATGCGAATATTAG

mRNA sequence

ATGGAGAATCCCAATTCGTATGTTCATAGCAACATCGCCGGTTTAGTTACGCTCCTTGAGGCATGTAAATCGGCTAATCCACAACCGGCTGTGGTCTGGGCTTCTTCCAGTTCGGTTTACGCCACAAAAAAAGCCGGAGAGGAAATCACTCACACTTATAATCACATCTATGGTTTGTCGATAACCGGGTTGAGATTCTTCACGGTTTACGGTCCATGGGGCCGACCGGACATGGCGTATTTTTCATTCACGAGGAATATTCTTCAAGGAAAACCGATTACGGTTTTTCGTGGGAAGAACCGGGTTGATTTAGCCAGGGATTTCACTTACATTGATGATATTGTGAAAGGGTGTTTGGGGTCGTTGGATACATCAGGGAAGAGCACCGGTTCAGGTGAAGAAAACCGGACCGGCGGCGTAGAGGATATTCAACTTGGGGAATACATCGCCGGTGACGGTGCCGACGTTGGTGAGTATATTGGAGAGGCATTTGAAGGTGAAGGCAAAAGAAAATGTGGTGGAAATGCCTGGAAACGGCGACGTTCCGTTTACTCATGCGAATATTAG

Coding sequence (CDS)

ATGGAGAATCCCAATTCGTATGTTCATAGCAACATCGCCGGTTTAGTTACGCTCCTTGAGGCATGTAAATCGGCTAATCCACAACCGGCTGTGGTCTGGGCTTCTTCCAGTTCGGTTTACGCCACAAAAAAAGCCGGAGAGGAAATCACTCACACTTATAATCACATCTATGGTTTGTCGATAACCGGGTTGAGATTCTTCACGGTTTACGGTCCATGGGGCCGACCGGACATGGCGTATTTTTCATTCACGAGGAATATTCTTCAAGGAAAACCGATTACGGTTTTTCGTGGGAAGAACCGGGTTGATTTAGCCAGGGATTTCACTTACATTGATGATATTGTGAAAGGGTGTTTGGGGTCGTTGGATACATCAGGGAAGAGCACCGGTTCAGGTGAAGAAAACCGGACCGGCGGCGTAGAGGATATTCAACTTGGGGAATACATCGCCGGTGACGGTGCCGACGTTGGTGAGTATATTGGAGAGGCATTTGAAGGTGAAGGCAAAAGAAAATGTGGTGGAAATGCCTGGAAACGGCGACGTTCCGTTTACTCATGCGAATATTAG

Protein sequence

MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRGKNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENRTGGVEDIQLGEYIAGDGADVGEYIGEAFEGEGKRKCGGNAWKRRRSVYSCEY
Homology
[Close]
BLAST of Carg11949 vs. NCBI nr
Match: XP_004144711.1 (PREDICTED: UDP-glucuronate 4-epimerase 1 [Cucumis sativus] >KGN61076.1 UDP-glucuronate 5-epimerase [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 132/154 (85.71%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 133
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 335

[Close]
BLAST of Carg11949 vs. NCBI nr
Match: XP_008465609.1 (PREDICTED: UDP-glucuronate 4-epimerase 1 [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 132/154 (85.71%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 133
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 335

[Close]
BLAST of Carg11949 vs. NCBI nr
Match: XP_022946532.1 (UDP-glucuronate 4-epimerase 1 [Cucurbita moschata])

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 132/154 (85.71%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 133
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 335

[Close]
BLAST of Carg11949 vs. NCBI nr
Match: XP_022999693.1 (UDP-glucuronate 4-epimerase 1 [Cucurbita maxima])

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 132/154 (85.71%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 133
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 335

[Close]
BLAST of Carg11949 vs. NCBI nr
Match: XP_023547336.1 (UDP-glucuronate 4-epimerase 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 132/154 (85.71%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 133
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 335

[Close]
BLAST of Carg11949 vs. TAIR10
Match: AT4G30440.1 (UDP-D-glucuronate 4-epimerase 1)

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-66
Identity = 123/158 (77.85%), Postives = 131/158 (82.91%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           +ENP SYVHSNIAGLV LLE CK+ANPQPA+VWASSSSVY                    
Sbjct: 179 LENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASL 238

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGL+ITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPIT++RG
Sbjct: 239 YAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRG 298

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
           KNRVDLARDFTYIDDIVKGCLGSLD+SGKSTGSG + R
Sbjct: 299 KNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKR 336

[Close]
BLAST of Carg11949 vs. TAIR10
Match: AT1G02000.1 (UDP-D-glucuronate 4-epimerase 2)

HSP 1 Score: 223.8 bits (569), Expect = 9.0e-59
Identity = 111/158 (70.25%), Postives = 121/158 (76.58%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENP SYVHSNIAG V LLE CKSANPQPA+VWASSSSVY                    
Sbjct: 183 MENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL 242

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK I++F G
Sbjct: 243 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEG 302

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
            N   +ARDFTYIDDIVKGCLG+LDT+ KSTGSG + R
Sbjct: 303 ANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKR 340

[Close]
BLAST of Carg11949 vs. TAIR10
Match: AT4G00110.1 (UDP-D-glucuronate 4-epimerase 3)

HSP 1 Score: 223.8 bits (569), Expect = 9.0e-59
Identity = 111/158 (70.25%), Postives = 122/158 (77.22%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENP+SYVHSNIAG V LLE CKSANPQPA+VWASSSSVY                    
Sbjct: 182 MENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK I++F G
Sbjct: 242 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
            N   +ARDFTYIDDIVKGCLG+LDT+ KSTGSG + R
Sbjct: 302 VNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKR 339

[Close]
BLAST of Carg11949 vs. TAIR10
Match: AT2G45310.1 (UDP-D-glucuronate 4-epimerase 4)

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-56
Identity = 107/158 (67.72%), Postives = 119/158 (75.32%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENP+SYVHSNIAG V LLE CKS NPQPA+VWASSSSVY                    
Sbjct: 188 MENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPASL 247

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL+GK I++F  
Sbjct: 248 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIFES 307

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
            N   +ARDFTYIDDIVKGCL +LDT+ KSTGSG + R
Sbjct: 308 ANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKR 345

[Close]
BLAST of Carg11949 vs. TAIR10
Match: AT4G12250.1 (UDP-D-glucuronate 4-epimerase 5)

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54
Identity = 105/158 (66.46%), Postives = 119/158 (75.32%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           M+NP SYV+SNIAG V LLE  KSANPQPA+VWASSSSVY                    
Sbjct: 187 MQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASL 246

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGE I HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL+GK ITVF  
Sbjct: 247 YAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFES 306

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
            ++  +ARDFTYIDDIVKGCLG+LDT+ KSTGSG + +
Sbjct: 307 PDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKK 344

[Close]
BLAST of Carg11949 vs. Swiss-Prot
Match: sp|Q9M0B6|GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=GAE1 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.1e-65
Identity = 123/158 (77.85%), Postives = 131/158 (82.91%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           +ENP SYVHSNIAGLV LLE CK+ANPQPA+VWASSSSVY                    
Sbjct: 179 LENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASL 238

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGL+ITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPIT++RG
Sbjct: 239 YAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRG 298

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
           KNRVDLARDFTYIDDIVKGCLGSLD+SGKSTGSG + R
Sbjct: 299 KNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKR 336

[Close]
BLAST of Carg11949 vs. Swiss-Prot
Match: sp|Q9LPC1|GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana OX=3702 GN=GAE2 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-57
Identity = 111/158 (70.25%), Postives = 121/158 (76.58%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENP SYVHSNIAG V LLE CKSANPQPA+VWASSSSVY                    
Sbjct: 183 MENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL 242

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK I++F G
Sbjct: 243 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEG 302

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
            N   +ARDFTYIDDIVKGCLG+LDT+ KSTGSG + R
Sbjct: 303 ANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKR 340

[Close]
BLAST of Carg11949 vs. Swiss-Prot
Match: sp|O81312|GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana OX=3702 GN=GAE3 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-57
Identity = 111/158 (70.25%), Postives = 122/158 (77.22%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENP+SYVHSNIAG V LLE CKSANPQPA+VWASSSSVY                    
Sbjct: 182 MENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK I++F G
Sbjct: 242 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
            N   +ARDFTYIDDIVKGCLG+LDT+ KSTGSG + R
Sbjct: 302 VNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKR 339

[Close]
BLAST of Carg11949 vs. Swiss-Prot
Match: sp|O22141|GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana OX=3702 GN=GAE4 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-55
Identity = 107/158 (67.72%), Postives = 119/158 (75.32%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENP+SYVHSNIAG V LLE CKS NPQPA+VWASSSSVY                    
Sbjct: 188 MENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPASL 247

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL+GK I++F  
Sbjct: 248 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIFES 307

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
            N   +ARDFTYIDDIVKGCL +LDT+ KSTGSG + R
Sbjct: 308 ANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKR 345

[Close]
BLAST of Carg11949 vs. Swiss-Prot
Match: sp|Q9STI6|GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana OX=3702 GN=GAE5 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-53
Identity = 105/158 (66.46%), Postives = 119/158 (75.32%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           M+NP SYV+SNIAG V LLE  KSANPQPA+VWASSSSVY                    
Sbjct: 187 MQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASL 246

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGE I HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL+GK ITVF  
Sbjct: 247 YAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFES 306

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
            ++  +ARDFTYIDDIVKGCLG+LDT+ KSTGSG + +
Sbjct: 307 PDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKK 344

[Close]
BLAST of Carg11949 vs. TrEMBL
Match: tr|A0A1S3CP94|A0A1S3CP94_CUCME (UDP-glucuronate 4-epimerase 1 OS=Cucumis melo OX=3656 GN=LOC103503248 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.4e-66
Identity = 132/154 (85.71%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 133
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 335

[Close]
BLAST of Carg11949 vs. TrEMBL
Match: tr|A0A0A0LM85|A0A0A0LM85_CUCSA (UDP-glucuronate 5-epimerase OS=Cucumis sativus OX=3659 GN=Csa_2G037230 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.4e-66
Identity = 132/154 (85.71%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 133
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG 335

[Close]
BLAST of Carg11949 vs. TrEMBL
Match: tr|A0A1Q3CPZ0|A0A1Q3CPZ0_CEPFO (Epimerase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25771 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.2e-66
Identity = 130/158 (82.28%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLEACKSANPQP++VWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNEKVPFSESDRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITV+RG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG + R
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKR 339

[Close]
BLAST of Carg11949 vs. TrEMBL
Match: tr|D2D334|D2D334_GOSHI (UDP-D-glucuronic acid 4-epimerase OS=Gossypium hirsutum OX=3635 GN=LOC107899686 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.2e-65
Identity = 129/158 (81.65%), Postives = 133/158 (84.18%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLE CKSANPQPAVVWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEICKSANPQPAVVWASSSSVYGLNEKVPFSEADRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPIT++RG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG + +
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKK 339

[Close]
BLAST of Carg11949 vs. TrEMBL
Match: tr|A0A0D2VXK2|A0A0D2VXK2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G096800 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.2e-65
Identity = 129/158 (81.65%), Postives = 133/158 (84.18%), Query Frame = 0 

Query: 1   MENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVY-------------------- 60
           MENPNSYVHSNIAGLVTLLE CKSANPQPAVVWASSSSVY                    
Sbjct: 182 MENPNSYVHSNIAGLVTLLEICKSANPQPAVVWASSSSVYGLNEKVPFSEADRTDQPASL 241

Query: 61  --ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFRG 120
             ATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPIT++RG
Sbjct: 242 YAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRG 301

Query: 121 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGEENR 137
           KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSG + +
Sbjct: 302 KNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKK 339

The following BLAST results are available for this feature:
BLAST of Carg11949 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144711.12.1e-6685.71PREDICTED: UDP-glucuronate 4-epimerase 1 [Cucumis sativus] >KGN61076.1 UDP-glucu... [more]
XP_008465609.12.1e-6685.71PREDICTED: UDP-glucuronate 4-epimerase 1 [Cucumis melo][more]
XP_022946532.12.1e-6685.71UDP-glucuronate 4-epimerase 1 [Cucurbita moschata][more]
XP_022999693.12.1e-6685.71UDP-glucuronate 4-epimerase 1 [Cucurbita maxima][more]
XP_023547336.12.1e-6685.71UDP-glucuronate 4-epimerase 1 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg11949 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30440.11.2e-6677.85UDP-D-glucuronate 4-epimerase 1[more]
AT1G02000.19.0e-5970.25UDP-D-glucuronate 4-epimerase 2[more]
AT4G00110.19.0e-5970.25UDP-D-glucuronate 4-epimerase 3[more]
AT2G45310.11.4e-5667.72UDP-D-glucuronate 4-epimerase 4[more]
AT4G12250.11.3e-5466.46UDP-D-glucuronate 4-epimerase 5[more]
BLAST of Carg11949 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M0B6|GAE1_ARATH2.1e-6577.85UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=GAE1 PE=1 SV=1[more]
sp|Q9LPC1|GAE2_ARATH1.6e-5770.25UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana OX=3702 GN=GAE2 PE=2 SV=1[more]
sp|O81312|GAE3_ARATH1.6e-5770.25UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana OX=3702 GN=GAE3 PE=2 SV=1[more]
sp|O22141|GAE4_ARATH2.6e-5567.72UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana OX=3702 GN=GAE4 PE=1 SV=1[more]
sp|Q9STI6|GAE5_ARATH2.4e-5366.46UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana OX=3702 GN=GAE5 PE=2 SV=1[more]
BLAST of Carg11949 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CP94|A0A1S3CP94_CUCME1.4e-6685.71UDP-glucuronate 4-epimerase 1 OS=Cucumis melo OX=3656 GN=LOC103503248 PE=4 SV=1[more]
tr|A0A0A0LM85|A0A0A0LM85_CUCSA1.4e-6685.71UDP-glucuronate 5-epimerase OS=Cucumis sativus OX=3659 GN=Csa_2G037230 PE=4 SV=1[more]
tr|A0A1Q3CPZ0|A0A1Q3CPZ0_CEPFO3.2e-6682.28Epimerase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v... [more]
tr|D2D334|D2D334_GOSHI1.2e-6581.65UDP-D-glucuronic acid 4-epimerase OS=Gossypium hirsutum OX=3635 GN=LOC107899686 ... [more]
tr|A0A0D2VXK2|A0A0D2VXK2_GOSRA1.2e-6581.65Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G096800 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR001509Epimerase_deHydtase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050662 coenzyme binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11949-RACarg11949-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.720coord: 42..150
e-value: 3.4E-23
score: 83.9
NoneNo IPR availableGENE3DG3DSA:3.40.50.720coord: 1..41
e-value: 3.9E-7
score: 31.4
NoneNo IPR availablePANTHERPTHR43574FAMILY NOT NAMEDcoord: 1..41
coord: 41..134
NoneNo IPR availablePANTHERPTHR43574:SF17SUBFAMILY NOT NAMEDcoord: 41..134
coord: 1..41
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 41..124
e-value: 1.3E-13
score: 50.9
IPR036291NAD(P)-binding domain superfamilySUPERFAMILYSSF51735NAD(P)-binding Rossmann-fold domainscoord: 2..140

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg11949Carg16411Silver-seed gourdcarcarB523
The following block(s) are covering this gene:
GeneOrganismBlock
Carg11949Watermelon (97103) v2carwmbB0587
Carg11949Wax gourdcarwgoB0671