Carg11915 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11915
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	PITH domain-containing protein 1
Location	Cucurbita_argyrosperma_scaffold_036 : 789222 .. 792333 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTTTCTCGTAATGCTTTATATCCAAGCGAAGCAATCTGAACGACGCCGTTATGAGAATCTCCCACTTTCTTTTTCCCTCTGCAATCCCTTTTCGTCTTGGGCATTATTGTTCTGGAGGCTCGAGGATGGCTTGCTTACACGATCACAGTTGCGAAGATCACGATTGTTCTTCTGATTGGTCTCTATACAAGCACATAGACCTCCCCAGAGTTAGTGCAAATCTCTCTCTCTCTCTCTAGCACACGAATTTTCTTCTTTGCCAATGCTTATTACGACTTCGAATCACTCAAAACTAGTTCGTATAATCATTTTTCCTGCGAGCAATTTGATATTCATGGTTCTGGCTTTGGATTTTAGTAATCTCCATATCCGTTAGCTGAATGAGTATATCCTGCTGTTCTTCTCAATTACAGTGCTTAGATTTTTATTTTTTTATTTTTTGTGAATAGCGATTGCTCATGATCCTGAATCTTTTCTTCTGTCATTGTCTTTGGTTCATCACGTGCAAATTGGGTTTGTATTGGTTAAATTAATTTTTTCCAAGTTGGGTTTATAGCCCAGCTATTTGACAAGAAGTCAATAATTTATATATGCATATTTAAAGGATCTGGAAGAGAATGGTGCCGACATTGCTATCGCTTAGTTCATCTCTGAGTTTTGTAAGCGATGAACATCGTACGCGTATTAAGAAAATCAATGATTATATACTAATTGATAAAGTTTTAGAAATATATTTGTTGCCTGAGCCATCTAGGCGAGAGGTCTTGCAAACCTAGAGGAGTTTTTCAATAACTGGAATAACTGAGTGAGATGTTGAAAATGTTGATGGATTTTTCCAAGAAACTTTTAAGGCATAAGTTCACCAGCAGATGCTTGGAATAAATACTATGGGCGAGGTGTTGTTGAAAATGATATACCTTCCTGTTTATTTAAGGCTAGAAGGAATGGGTGAGATTAGATTGAATATGTTGAAACTGCATAATGATCTTGTGTTCCTCTATCTTTGATAATCGAAGCTATTTAAAGCGAATTACTCATAGAATCGTACTAGCACGACAACGGCCCCTTCTCCCTATAGCATGTTTCGTGTAAGCTTAACAAGCGCAGTTACTTAATCGCCTCGTTGATAATTGTGGACGGAATCGATTGGATCTTATAATTGACTTTCATGGGAGAGCCTTGAACTTTTATTTGTCTTGATCCTGCTGGTTTTTAATCGTAGATGATTACATGTCGAACCCACACATAGAATACATTTTTGTTTTCTCTAAGGAACCAGTGGAAATTTTATTTTTGGTCATTGGTTCTGTTATTTTCTAGGTTTCTGCTTTGAATGAGGCGACTCCAGGAAGTGTGAAGACTGTATTTAAAGCTTGGGAGCATCGGTTAAATTCATCCGGGGTACTTAACCGTTATGCTTGTGTGTATTAATACCATGTGCTCTGTTGCTAAGATAATGTAGCCTCATGTATTCTTTTTCTATGGCAGGATCACTTGGAAAGCAACGAGGGTGATCCTGAACTGATAGTTTTCATCCCGTAGGTGTCTTCAGTACTTCTTGATTCCAGCTATACCTAATACCTCAATAACATTGAGATTTACTTGATTAATATGTACAATTATTGTAATGCTTATTCATTTACATTTGATGTAACAAAATTTATAGTTTCTCAACCATCCCATCTATATATCTCAGGTTGAATTTATGCAAATAAATAATTTTTGAAATGTAACTTATCATGACTTTCCCATTTTGTTTATTCTTCTAGGAAAATCCATGACCTTCCTAAAAGGTCCTCATATGTAAACTATTTCACCTATGTTTGCATATTGTTAAATAATGTTGGGAAACGTAGTTTCATGTTCCTACTTAAGAGAAACATGTTTATATTAAGAATCTGTGCTTGTTGGCTAGTCTGAAAATTCGAAAACGGTCATGGAAAGAACAATCTAGATATCTGATAACATCATTTCACGATGATTTCTATGCCTGTATGGTGTGTACTTTTTGTGTTCTGGGCCTACTTCCTGTTTCTTAAAAATTCATTACCACTTATTTGATGATTATTAGATTTACATCAGATGTTAAGATCAAAAGCATAGCTATCATTGGTGGTCCAGATGGTACTAGTCCTTCAAAGATGCGAGCGTAAGTAAAATTTTCTCGAACTTTCTGGCACTTCGGTTTCTATGTTATATAGTAAGATTTATCCCTTCTCTCTCTGCATTAGTTCTTATAAGTCAATTATCCCATACTTCTCGTTCGTAATTAGGTTTATCAACCGAGAAGGTATCGACTTCTCTGATGCTCAAAGTATGCAAGCTGTTCAGGTACTGCCTGTTAGCTTATCTAGAGGTTCATGGAGAAATTTTTTAACATCTAAACATATGTTGTAATTGTAATGCATTTTATATTATTTCTAGGAGTGGGATTTGGCTGAGAATTTGCAAGGAGTATTAGAGTACCAGACAAGGTAAGGATGCTTTGTAGAACAACAAATCTTTCTGTTCGTCTTAATGTTTGAATTAAGAGCTAAAAAGTTGAGCATTATCTATTCTCCTACGAGTAAGCATTCTTAATCTGTAGAACAACATACATTCAATGTTAGATTACAATTATTTTTTGACTGCTAGTTTATATACATAATCAGATATTCCAAATTTCAAAGTGTGGCAAATATCACTTTGCATTTTCCTGACAATTATGGCGGTGACACGTCTCAGATACACTACATTGGGTTGAAAGGTGAAGCCACACAGGTAAAGTTGTCACAAAGAACCAGTTGATGTTTTTGTTGGTTTAAGTAACTAAACATCTTCATTTTAATCAACAGCTAAAGAGAGATGTTGTTGCAACTATTGTTTATGAAATTACGCCAAATCCTTCTGACCACAAGTAAGTGACATTTCCCTTCATGGACGGTATTGAATGTATTCTTCTTGTGCTTTTCCTTCAAGAACGCATTAACCTAAGCGTTTTTCACTCAGTTCAGTTGCCATGGTAGACAATACTGCATTCATTATAGCTATACATTGTAACATCCCAAGCCCACTTTGGACTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACACGTCTGTTAGG

mRNA sequence

TCCTCTTTCTCGTAATGCTTTATATCCAAGCGAAGCAATCTGAACGACGCCGTTATGAGAATCTCCCACTTTCTTTTTCCCTCTGCAATCCCTTTTCGTCTTGGGCATTATTGTTCTGGAGGCTCGAGGATGGCTTGCTTACACGATCACAGTTGCGAAGATCACGATTGTTCTTCTGATTGGTCTCTATACAAGCACATAGACCTCCCCAGAGTTTCTGCTTTGAATGAGGCGACTCCAGGAAGTGTGAAGACTGTATTTAAAGCTTGGGAGCATCGGTTAAATTCATCCGGGGATCACTTGGAAAGCAACGAGGGTGATCCTGAACTGATAGTTTTCATCCCATTTACATCAGATGTTAAGATCAAAAGCATAGCTATCATTGGTGGTCCAGATGGTACTAGTCCTTCAAAGATGCGAGCGTTTATCAACCGAGAAGGTATCGACTTCTCTGATGCTCAAAGTATGCAAGCTGTTCAGGAGTGGGATTTGGCTGAGAATTTGCAAGGAGTATTAGAGTACCAGACAAGATATTCCAAATTTCAAAGTGTGGCAAATATCACTTTGCATTTTCCTGACAATTATGGCGGTGACACGTCTCAGATACACTACATTGGGTTGAAAGGTGAAGCCACACAGCTAAAGAGAGATGTTGTTGCAACTATTGTTTATGAAATTACGCCAAATCCTTCTGACCACAAGTAAGTGACATTTCCCTTCATGGACGGTATTGAATGTATTCTTCTTGTGCTTTTCCTTCAAGAACGCATTAACCTAAGCGTTTTTCACTCAGTTCAGTTGCCATGGTAGACAATACTGCATTCATTATAGCTATACATTGTAACATCCCAAGCCCACTTTGGACTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACACGTCTGTTAGG

Coding sequence (CDS)

ATGAGAATCTCCCACTTTCTTTTTCCCTCTGCAATCCCTTTTCGTCTTGGGCATTATTGTTCTGGAGGCTCGAGGATGGCTTGCTTACACGATCACAGTTGCGAAGATCACGATTGTTCTTCTGATTGGTCTCTATACAAGCACATAGACCTCCCCAGAGTTTCTGCTTTGAATGAGGCGACTCCAGGAAGTGTGAAGACTGTATTTAAAGCTTGGGAGCATCGGTTAAATTCATCCGGGGATCACTTGGAAAGCAACGAGGGTGATCCTGAACTGATAGTTTTCATCCCATTTACATCAGATGTTAAGATCAAAAGCATAGCTATCATTGGTGGTCCAGATGGTACTAGTCCTTCAAAGATGCGAGCGTTTATCAACCGAGAAGGTATCGACTTCTCTGATGCTCAAAGTATGCAAGCTGTTCAGGAGTGGGATTTGGCTGAGAATTTGCAAGGAGTATTAGAGTACCAGACAAGATATTCCAAATTTCAAAGTGTGGCAAATATCACTTTGCATTTTCCTGACAATTATGGCGGTGACACGTCTCAGATACACTACATTGGGTTGAAAGGTGAAGCCACACAGCTAAAGAGAGATGTTGTTGCAACTATTGTTTATGAAATTACGCCAAATCCTTCTGACCACAAGTAA

Protein sequence

MRISHFLFPSAIPFRLGHYCSGGSRMACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLESNEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWDLAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIVYEITPNPSDHK

Homology

[Close]

BLAST of Carg11915 vs. NCBI nr
Match: XP_022997023.1 (PITH domain-containing protein 1 [Cucurbita maxima] >XP_023547313.1 PITH domain-containing protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.3 bits (1022), Expect = 1.7e-107
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES
Sbjct: 1   MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD
Sbjct: 61  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV
Sbjct: 121 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YEITPNPSDHK
Sbjct: 181 YEITPNPSDHK 191

[Close]

BLAST of Carg11915 vs. NCBI nr
Match: XP_022962575.1 (PITH domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 396.7 bits (1018), Expect = 4.9e-107
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MAC HDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES
Sbjct: 1   MACFHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD
Sbjct: 61  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV
Sbjct: 121 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YEITPNPSDHK
Sbjct: 181 YEITPNPSDHK 191

[Close]

BLAST of Carg11915 vs. NCBI nr
Match: XP_004142920.1 (PREDICTED: PITH domain-containing protein 1 [Cucumis sativus] >KGN62400.1 hypothetical protein Csa_2G351810 [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 1.0e-104
Identity = 184/191 (96.34%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVK+VFKAWEHRLNSSGDHLES
Sbjct: 1   MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKSVFKAWEHRLNSSGDHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPEL+VFIPFTSDVKIKSI+IIGGPDGTSPSKMR FINREGIDFSDAQSMQAVQEWD
Sbjct: 61  NEGDPELLVFIPFTSDVKIKSISIIGGPDGTSPSKMRVFINREGIDFSDAQSMQAVQEWD 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           LAENLQGVLEYQTRYSKFQ V NITLHFPDNYGGDT+QIHYIGLKGEATQLKRDVVATIV
Sbjct: 121 LAENLQGVLEYQTRYSKFQGVGNITLHFPDNYGGDTTQIHYIGLKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YEITPNPSDHK
Sbjct: 181 YEITPNPSDHK 191

[Close]

BLAST of Carg11915 vs. NCBI nr
Match: XP_016899908.1 (PREDICTED: PITH domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 1.7e-104
Identity = 183/191 (95.81%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVK+VFKAWEHRLNSSGDHLES
Sbjct: 1   MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKSVFKAWEHRLNSSGDHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPEL+VFIPFTSDVKIKSI+IIGGPDGTSPSKMR FINREGIDFSDAQSMQAVQEWD
Sbjct: 61  NEGDPELLVFIPFTSDVKIKSISIIGGPDGTSPSKMRVFINREGIDFSDAQSMQAVQEWD 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           LAENLQGVLEYQTRYSKFQ V N+TLHFPDNYGGDT+QIHYIGLKGEATQLKRDVVATIV
Sbjct: 121 LAENLQGVLEYQTRYSKFQGVGNLTLHFPDNYGGDTTQIHYIGLKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YEITPNPSDHK
Sbjct: 181 YEITPNPSDHK 191

[Close]

BLAST of Carg11915 vs. NCBI nr
Match: XP_022132247.1 (PITH domain-containing protein 1 [Momordica charantia])

HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101
Identity = 180/191 (94.24%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVK+VFKAWE RLNSSGDHLES
Sbjct: 1   MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKSVFKAWEDRLNSSGDHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPEL+VFIPFTSDVKIKSI+IIGG DGTSPSKMR FINREGIDFSDAQSMQAVQEWD
Sbjct: 61  NEGDPELLVFIPFTSDVKIKSISIIGGSDGTSPSKMRVFINREGIDFSDAQSMQAVQEWD 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           L EN QGVLEYQTRYSKFQSVANITLHFPD+YGGD +QIHYIGLKGEATQLKRDVVATIV
Sbjct: 121 LVENFQGVLEYQTRYSKFQSVANITLHFPDSYGGDMTQIHYIGLKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YEITPNPSDHK
Sbjct: 181 YEITPNPSDHK 191

[Close]

BLAST of Carg11915 vs. TAIR10
Match: AT2G25950.1 (Protein of unknown function (DUF1000))

HSP 1 Score: 348.2 bits (892), Expect = 3.6e-96
Identity = 160/191 (83.77%), Postives = 180/191 (94.24%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           M+C HDH+CEDH+CSSDWSLYKHIDL +VSALNE+  GS K+VFKAWE RL+SSG+HLES
Sbjct: 1   MSCTHDHNCEDHECSSDWSLYKHIDLSKVSALNESVSGSAKSVFKAWEQRLHSSGEHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPEL+VF+PFTSDVKIKSI+I+GGP+GTSPSK+R FINREGIDFSDA+SMQAVQEW+
Sbjct: 61  NEGDPELLVFVPFTSDVKIKSISIVGGPEGTSPSKLRVFINREGIDFSDAESMQAVQEWE 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           LAENLQGVLEYQTRYSKFQSV NITLHFP+++GGDT+QI YIG KGEATQLKRDVVATIV
Sbjct: 121 LAENLQGVLEYQTRYSKFQSVGNITLHFPESFGGDTTQIRYIGFKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YEI PNPSDHK
Sbjct: 181 YEIRPNPSDHK 191

[Close]

BLAST of Carg11915 vs. Swiss-Prot
Match: sp|Q54Z24|PITH1_DICDI (PITH domain-containing protein 1 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277951 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-38
Identity = 82/201 (40.80%), Postives = 123/201 (61.19%), Query Frame = 0


Query: 16  LGHYCSGGSRMACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHR 75
           + H C+  S     H H  +D     ++SL +++D   ++ LNE   GSV+ +FK+WE R
Sbjct: 1   MAHQCNDSS-----HSHGVDD---GIEYSLNRYLDTGTITCLNEKVKGSVRHIFKSWEDR 60

Query: 76  LNSSGDHLESNEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDA 135
            +    H   +  D ELI+ IPF +  +IKSI IIGG  G+SP+KM+A+IN   IDF + 
Sbjct: 61  HDLK--HFVESCDDEELIINIPFGAVTQIKSIIIIGGDGGSSPNKMKAYINNSNIDFGNI 120

Query: 136 QSMQAVQEWDLAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQ 195
            S    QEW+L E+ +G + Y T+ +KF ++ ++TL+FP N+G  T++I++I LKG  T 
Sbjct: 121 NSFACTQEWNLHEDFEGQIGYSTKPTKFNNINHLTLYFPSNFGSPTTKIYFIALKGVYTS 180

Query: 196 LKRDVVATIVYEITPNPSDHK 217
            KR++V T VYE  P   DHK
Sbjct: 181 AKREIVNT-VYESKPQLQDHK 190

[Close]

BLAST of Carg11915 vs. Swiss-Prot
Match: sp|Q9GZP4|PITH1_HUMAN (PITH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=PITHD1 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-32
Identity = 71/174 (40.80%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 43  WSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLESNEGDPELIVFIPFTSDV 102
           + LY  IDL R+  LNE+  GS + VFK WE R + S      ++ D EL+  IPFT +V
Sbjct: 29  YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDRS--KFVESDADEELLFNIPFTGNV 88

Query: 103 KIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWDLAENLQGVLEYQTRYSK 162
           K+K I I+G  D + PS+MR + N   + F D +  +  Q + L  +L G LEY T+ S+
Sbjct: 89  KLKGIIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPDQTFSLNRDLTGELEYATKISR 148

Query: 163 FQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIVYEITPNPSDHK 217
           F +V ++++H   N+G DT+++ YIGL+GE T+L+R  V    YE + NP+DH+
Sbjct: 149 FSNVYHLSIHISKNFGADTTKVFYIGLRGEWTELRRHEVTICNYEASANPADHR 199

[Close]

BLAST of Carg11915 vs. Swiss-Prot
Match: sp|Q8BWR2|PITH1_MOUSE (PITH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Pithd1 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.7e-32
Identity = 70/174 (40.23%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 43  WSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLESNEGDPELIVFIPFTSDV 102
           + LY  IDL R+  LNE+  GS + VFK WE R + S      ++ D EL+  IPFT +V
Sbjct: 29  YGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDRS--KFVESDADEELLFNIPFTGNV 88

Query: 103 KIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWDLAENLQGVLEYQTRYSK 162
           K+K + I+G  D + PS+MR + N   + F D +  +  Q + L  ++ G LEY T+ S+
Sbjct: 89  KLKGVIIMGEDDDSHPSEMRLYKNIPQMSFDDTE-REPEQTFSLNRDITGELEYATKISR 148

Query: 163 FQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIVYEITPNPSDHK 217
           F +V ++++H   N+G DT++I YIGL+GE T+L+R  V    YE + NP+DH+
Sbjct: 149 FSNVYHLSIHISKNFGADTTKIFYIGLRGEWTELRRHEVTICNYEASANPADHR 199

[Close]

BLAST of Carg11915 vs. Swiss-Prot
Match: sp|Q29L80|PITH1_DROPS (PITH domain-containing protein GA19395 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA19395 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.0e-31
Identity = 74/191 (38.74%), Postives = 113/191 (59.16%), Query Frame = 0


Query: 28  CLHDHSCEDH--DCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 87
           C H+ +  DH  +   ++SLY  ID   +  LNE T GS KTVFK +E R + S      
Sbjct: 12  CGHEATDVDHALEMGIEYSLYTKIDAENLECLNEETEGSGKTVFKPYESRQDMS--KFVQ 71

Query: 88  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 147
           ++ D EL+  IPFT ++K+K I I G  D + P+K++ F NR  + F DA+ ++  QE++
Sbjct: 72  SDADEELLFNIPFTGNIKLKGIIICGANDDSHPNKVKIFKNRPKMTFDDAK-VKVDQEFE 131

Query: 148 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 207
           L  + +G +EY  +   F SV ++TL+FP N+G D ++I+YIGL+GE ++     V    
Sbjct: 132 LTRDPRGEIEYSPKVVNFSSVHHLTLYFPSNFGDDKTRIYYIGLRGEFSEAHYHGVTICN 191

Query: 208 YEITPNPSDHK 217
           YE   N +DHK
Sbjct: 192 YEARANAADHK 199

[Close]

BLAST of Carg11915 vs. Swiss-Prot
Match: sp|Q9VK68|PITH1_DROME (PITH domain-containing protein CG6153 OS=Drosophila melanogaster OX=7227 GN=CG6153 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-30
Identity = 76/191 (39.79%), Postives = 114/191 (59.69%), Query Frame = 0


Query: 28  CLHDHSCEDH--DCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 87
           C H+ S  DH  +   ++SLY  IDL  V  LNE T G  K+VFK +E R + S  ++ES
Sbjct: 12  CSHEASDVDHALEMGIEYSLYTKIDLDNVECLNEETDGQGKSVFKPYEKRQDLS-KYVES 71

Query: 88  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 147
            + D EL+  IPFT ++K+K I I G  D + P+ ++ F NR  + F DA++ +  QE+ 
Sbjct: 72  -DADEELLFNIPFTGNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDARA-KPDQEFQ 131

Query: 148 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 207
           L  + +G +EY  +   F SV +++L+FP N+G D ++I+YIGL+GE T+     V    
Sbjct: 132 LTRDARGEIEYSPKVVTFSSVHHLSLYFPSNFGEDITRIYYIGLRGEFTEAHYHGVTICN 191

Query: 208 YEITPNPSDHK 217
           YE   N +DHK
Sbjct: 192 YESRANAADHK 199

[Close]

BLAST of Carg11915 vs. TrEMBL
Match: tr|A0A0A0LKF7|A0A0A0LKF7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351810 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 6.8e-105
Identity = 184/191 (96.34%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVK+VFKAWEHRLNSSGDHLES
Sbjct: 1   MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKSVFKAWEHRLNSSGDHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPEL+VFIPFTSDVKIKSI+IIGGPDGTSPSKMR FINREGIDFSDAQSMQAVQEWD
Sbjct: 61  NEGDPELLVFIPFTSDVKIKSISIIGGPDGTSPSKMRVFINREGIDFSDAQSMQAVQEWD 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           LAENLQGVLEYQTRYSKFQ V NITLHFPDNYGGDT+QIHYIGLKGEATQLKRDVVATIV
Sbjct: 121 LAENLQGVLEYQTRYSKFQGVGNITLHFPDNYGGDTTQIHYIGLKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YEITPNPSDHK
Sbjct: 181 YEITPNPSDHK 191

[Close]

BLAST of Carg11915 vs. TrEMBL
Match: tr|A0A1S4DVA9|A0A1S4DVA9_CUCME (PITH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103487796 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.2e-104
Identity = 183/191 (95.81%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVK+VFKAWEHRLNSSGDHLES
Sbjct: 1   MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKSVFKAWEHRLNSSGDHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPEL+VFIPFTSDVKIKSI+IIGGPDGTSPSKMR FINREGIDFSDAQSMQAVQEWD
Sbjct: 61  NEGDPELLVFIPFTSDVKIKSISIIGGPDGTSPSKMRVFINREGIDFSDAQSMQAVQEWD 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           LAENLQGVLEYQTRYSKFQ V N+TLHFPDNYGGDT+QIHYIGLKGEATQLKRDVVATIV
Sbjct: 121 LAENLQGVLEYQTRYSKFQGVGNLTLHFPDNYGGDTTQIHYIGLKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YEITPNPSDHK
Sbjct: 181 YEITPNPSDHK 191

[Close]

BLAST of Carg11915 vs. TrEMBL
Match: tr|A0A1S2XA04|A0A1S2XA04_CICAR (PITH domain-containing protein 1 OS=Cicer arietinum OX=3827 GN=LOC101497980 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.3e-100
Identity = 173/191 (90.58%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MACLHDHSCEDHDCSSDWSLYKHIDL ++SALNEATPGSVK+VFKAWEHRLNSSG+HLES
Sbjct: 1   MACLHDHSCEDHDCSSDWSLYKHIDLSKISALNEATPGSVKSVFKAWEHRLNSSGEHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPEL+VFIPFTSDVKIKSI+I+GGPDGTSPSKMRAFINR+GIDFSDAQSMQA+QEWD
Sbjct: 61  NEGDPELLVFIPFTSDVKIKSISIVGGPDGTSPSKMRAFINRDGIDFSDAQSMQAIQEWD 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           LAEN+QGVLEYQTRYSKFQSV NITLHFPDN+GGD ++IHYIGLKGEATQLKRDVVATIV
Sbjct: 121 LAENMQGVLEYQTRYSKFQSVGNITLHFPDNFGGDITKIHYIGLKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YE+ PNPSDHK
Sbjct: 181 YELMPNPSDHK 191

[Close]

BLAST of Carg11915 vs. TrEMBL
Match: tr|G7ILW3|G7ILW3_MEDTR (Thioredoxin family Trp26 protein OS=Medicago truncatula OX=3880 GN=11440817 PE=2 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 8.6e-100
Identity = 173/191 (90.58%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MAC+HDHSCEDHDCSSDWSLYKHIDL +VSALNEATPGSVK+VFKAWEHRLN+SG+HLES
Sbjct: 1   MACVHDHSCEDHDCSSDWSLYKHIDLEKVSALNEATPGSVKSVFKAWEHRLNTSGEHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPELIVFIPFTSDVKIKSI+I+GG DGTSPSKMRAFINR+GIDFSDAQSMQA+QEWD
Sbjct: 61  NEGDPELIVFIPFTSDVKIKSISIVGGADGTSPSKMRAFINRDGIDFSDAQSMQAIQEWD 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           LAENLQGVLEYQTRYSKFQ V NITLHFPDN+GGDT++IHYIGLKGEATQLKRDVVATIV
Sbjct: 121 LAENLQGVLEYQTRYSKFQGVGNITLHFPDNFGGDTTKIHYIGLKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YE+ PNPSDHK
Sbjct: 181 YELMPNPSDHK 191

[Close]

BLAST of Carg11915 vs. TrEMBL
Match: tr|A0A2P5EKT7|A0A2P5EKT7_9ROSA (PITH domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_180520 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.5e-99
Identity = 171/191 (89.53%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 26  MACLHDHSCEDHDCSSDWSLYKHIDLPRVSALNEATPGSVKTVFKAWEHRLNSSGDHLES 85
           MACLHDHSCEDHDCSSDWSLYKHIDLP+VSALNEATPGSVK+VFKAWEHRLNSSG+HLES
Sbjct: 1   MACLHDHSCEDHDCSSDWSLYKHIDLPKVSALNEATPGSVKSVFKAWEHRLNSSGEHLES 60

Query: 86  NEGDPELIVFIPFTSDVKIKSIAIIGGPDGTSPSKMRAFINREGIDFSDAQSMQAVQEWD 145
           NEGDPEL+VFIPFTSDVKIKSI+++GG DGTSPSKMRAFINR+GIDFSDAQSMQA+QEW+
Sbjct: 61  NEGDPELLVFIPFTSDVKIKSISVVGGADGTSPSKMRAFINRDGIDFSDAQSMQAIQEWE 120

Query: 146 LAENLQGVLEYQTRYSKFQSVANITLHFPDNYGGDTSQIHYIGLKGEATQLKRDVVATIV 205
           L EN QGVLEYQTRYSKFQSVANITLHFP+++GGDT+QIHYIG KGEATQLKRDVVATIV
Sbjct: 121 LVENFQGVLEYQTRYSKFQSVANITLHFPESFGGDTTQIHYIGFKGEATQLKRDVVATIV 180

Query: 206 YEITPNPSDHK 217
           YE+ PNPSDHK
Sbjct: 181 YELMPNPSDHK 191

The following BLAST results are available for this feature:

BLAST of Carg11915 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997023.1	1.7e-107	100.00	PITH domain-containing protein 1 [Cucurbita maxima] >XP_023547313.1 PITH domain-...	[more]
XP_022962575.1	4.9e-107	99.48	PITH domain-containing protein 1 [Cucurbita moschata]	[more]
XP_004142920.1	1.0e-104	96.34	PREDICTED: PITH domain-containing protein 1 [Cucumis sativus] >KGN62400.1 hypoth...	[more]
XP_016899908.1	1.7e-104	95.81	PREDICTED: PITH domain-containing protein 1 [Cucumis melo]	[more]
XP_022132247.1	1.8e-101	94.24	PITH domain-containing protein 1 [Momordica charantia]	[more]

BLAST of Carg11915 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25950.1	3.6e-96	83.77	Protein of unknown function (DUF1000)	[more]

BLAST of Carg11915 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q54Z24\|PITH1_DICDI	2.5e-38	40.80	PITH domain-containing protein 1 OS=Dictyostelium discoideum OX=44689 GN=DDB_G02...	[more]
sp\|Q9GZP4\|PITH1_HUMAN	2.1e-32	40.80	PITH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=PITHD1 PE=1 SV=1	[more]
sp\|Q8BWR2\|PITH1_MOUSE	2.7e-32	40.23	PITH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Pithd1 PE=1 SV=1	[more]
sp\|Q29L80\|PITH1_DROPS	3.0e-31	38.74	PITH domain-containing protein GA19395 OS=Drosophila pseudoobscura pseudoobscura...	[more]
sp\|Q9VK68\|PITH1_DROME	1.5e-30	39.79	PITH domain-containing protein CG6153 OS=Drosophila melanogaster OX=7227 GN=CG61...	[more]

BLAST of Carg11915 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LKF7\|A0A0A0LKF7_CUCSA	6.8e-105	96.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351810 PE=4 SV=1	[more]
tr\|A0A1S4DVA9\|A0A1S4DVA9_CUCME	1.2e-104	95.81	PITH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103487796 PE=4 SV...	[more]
tr\|A0A1S2XA04\|A0A1S2XA04_CICAR	1.3e-100	90.58	PITH domain-containing protein 1 OS=Cicer arietinum OX=3827 GN=LOC101497980 PE=4...	[more]
tr\|G7ILW3\|G7ILW3_MEDTR	8.6e-100	90.58	Thioredoxin family Trp26 protein OS=Medicago truncatula OX=3880 GN=11440817 PE=2...	[more]
tr\|A0A2P5EKT7\|A0A2P5EKT7_9ROSA	1.5e-99	89.53	PITH domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_180520...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008979	Galactose-bd-like_sf
IPR037047	PITH_dom_sf
IPR010400	PITH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11915-RA	Carg11915-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010400	PITH domain	PFAM	PF06201	PITH	coord: 45..192 e-value: 2.6E-38 score: 131.5
IPR010400	PITH domain	PROSITE	PS51532	PITH	coord: 34..209 score: 59.467
IPR037047	PITH domain superfamily	GENE3D	G3DSA:2.60.120.470		coord: 35..202 e-value: 1.0E-41 score: 144.4
None	No IPR available	PANTHER	PTHR12175	AD039 HT014 THIOREDOXIN FAMILY TRP26	coord: 25..216
None	No IPR available	PANTHER	PTHR12175:SF1	PITH DOMAIN-CONTAINING PROTEIN 1	coord: 25..216
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	SSF49785	Galactose-binding domain-like	coord: 31..192

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11915	Cla022669	Watermelon (97103) v1	carwmB0172
Carg11915	Csa2G351810	Cucumber (Chinese Long) v2	carcuB0202
Carg11915	ClCG08G016930	Watermelon (Charleston Gray)	carwcgB0178
Carg11915	CSPI02G18100	Wild cucumber (PI 183967)	carcpiB0209
Carg11915	Cucsa.395210	Cucumber (Gy14) v1	carcgyB0225
Carg11915	CmaCh05G001040	Cucurbita maxima (Rimu)	carcmaB0256
Carg11915	Lsi08G015730	Bottle gourd (USVL1VR-Ls)	carlsiB164
Carg11915	Cp4.1LG11g00060	Cucurbita pepo (Zucchini)	carcpeB0263
Carg11915	MELO3C030341.2	Melon (DHL92) v3.6.1	carmedB0190
Carg11915	CsaV3_2G025680	Cucumber (Chinese Long) v3	carcucB0209
Carg11915	Cla97C08G160610	Watermelon (97103) v2	carwmbB0190
Carg11915	Bhi04G000446	Wax gourd	carwgoB0231

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11915	Silver-seed gourd	carcarB216
Carg11915	Silver-seed gourd	carcarB223
Carg11915	Silver-seed gourd	carcarB224
Carg11915	Cucumber (Gy14) v2	carcgybB0195
Carg11915	Cucumber (Gy14) v2	carcgybB0197
Carg11915	Cucumber (Gy14) v2	carcgybB0199
Carg11915	Cucumber (Gy14) v1	carcgyB0221
Carg11915	Cucurbita maxima (Rimu)	carcmaB0247
Carg11915	Cucurbita maxima (Rimu)	carcmaB0249
Carg11915	Cucurbita maxima (Rimu)	carcmaB0251
Carg11915	Cucurbita moschata (Rifu)	carcmoB0255
Carg11915	Cucurbita moschata (Rifu)	carcmoB0257
Carg11915	Cucurbita moschata (Rifu)	carcmoB0263
Carg11915	Cucurbita pepo (Zucchini)	carcpeB0265
Carg11915	Cucurbita pepo (Zucchini)	carcpeB0268
Carg11915	Wild cucumber (PI 183967)	carcpiB0211
Carg11915	Wild cucumber (PI 183967)	carcpiB0214
Carg11915	Cucumber (Chinese Long) v2	carcuB0204
Carg11915	Cucumber (Chinese Long) v2	carcuB0207
Carg11915	Cucumber (Chinese Long) v3	carcucB0211
Carg11915	Bottle gourd (USVL1VR-Ls)	carlsiB162
Carg11915	Melon (DHL92) v3.5.1	carmeB0185
Carg11915	Melon (DHL92) v3.5.1	carmeB0186
Carg11915	Melon (DHL92) v3.5.1	carmeB0187
Carg11915	Melon (DHL92) v3.6.1	carmedB0189
Carg11915	Melon (DHL92) v3.6.1	carmedB0191
Carg11915	Watermelon (Charleston Gray)	carwcgB0177
Carg11915	Watermelon (97103) v1	carwmB0175
Carg11915	Watermelon (97103) v2	carwmbB0189
Carg11915	Wax gourd	carwgoB0236