Carg11869 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11869
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Gibberellin-regulated protein
Location	Cucurbita_argyrosperma_scaffold_036 : 574197 .. 574862 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAACTTTCTCTGCATTTCCTCACACTCTGTTTGTTTCCCGGGAAAATGAAGTTCCTTCATCTTCTTTCATGGATTCTCGTTCTCACCTCCTTCCTCCAGCTCTCCCTGGCTGCCCCAGGTAACAAATTAAACTCTTTGGAACAGAACAATATCATGCCGTAGTAAGAATATGAGACAAGTGGTTGTTTGTTTGTTTGTTTTTTGTGGGTGAAAGGTGTTTGCAGTTCGAAATGCGCAAGTAGATGTGCAAAAGCAGGGGTGCAGGATCGGTGCTTGAAGTACTGCGGGATATGCTGCGAGAAATGCGGGTGTGTGCCGTCTGGGACTTATGGGAACAAGCATGAGTGCCCTTGTTATGGGCGGATTAAGAACTCCAAGGGGAAGTCCAAGTGTCCTTAAAATCCACCCTCTACTGCCATCTGCTGCCTAAGCTGTGTGTTTGTGTTGTATAATCTCATTGCCTCTTCACTTTGCATGGAGTGTTATTGAGTTGATCTACCTATTAAACTTAAAACCTCTGTTTCAGTTATATCTTCTCTCAACTCTTTTCTATTTAGTGAAGATTGAGTTGTTTTATTTGGGACGATCTTGTTCACGTGCAGTGGACGATGTGCACCCTCACTTACTTTTTTCTGCCTGCAATTAATTTCTCAAACTTTAATGCA

mRNA sequence

ACAACTTTCTCTGCATTTCCTCACACTCTGTTTGTTTCCCGGGAAAATGAAGTTCCTTCATCTTCTTTCATGGATTCTCGTTCTCACCTCCTTCCTCCAGCTCTCCCTGGCTGCCCCAGGTGTTTGCAGTTCGAAATGCGCAAGTAGATGTGCAAAAGCAGGGGTGCAGGATCGGTGCTTGAAGTACTGCGGGATATGCTGCGAGAAATGCGGGTGTGTGCCGTCTGGGACTTATGGGAACAAGCATGAGTGCCCTTGTTATGGGCGGATTAAGAACTCCAAGGGGAAGTCCAAGTGTCCTTAAAATCCACCCTCTACTGCCATCTGCTGCCTAAGCTGTGTGTTTGTGTTGTATAATCTCATTGCCTCTTCACTTTGCATGGAGTGTTATTGAGTTGATCTACCTATTAAACTTAAAACCTCTGTTTCAGTTATATCTTCTCTCAACTCTTTTCTATTTAGTGAAGATTGAGTTGTTTTATTTGGGACGATCTTGTTCACGTGCAGTGGACGATGTGCACCCTCACTTACTTTTTTCTGCCTGCAATTAATTTCTCAAACTTTAATGCA

Coding sequence (CDS)

ATGAAGTTCCTTCATCTTCTTTCATGGATTCTCGTTCTCACCTCCTTCCTCCAGCTCTCCCTGGCTGCCCCAGGTGTTTGCAGTTCGAAATGCGCAAGTAGATGTGCAAAAGCAGGGGTGCAGGATCGGTGCTTGAAGTACTGCGGGATATGCTGCGAGAAATGCGGGTGTGTGCCGTCTGGGACTTATGGGAACAAGCATGAGTGCCCTTGTTATGGGCGGATTAAGAACTCCAAGGGGAAGTCCAAGTGTCCTTAA

Protein sequence

MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP

Homology

[Close]

BLAST of Carg11869 vs. NCBI nr
Match: XP_022961995.1 (peamaclein-like [Cucurbita moschata])

HSP 1 Score: 181.8 bits (460), Expect = 9.8e-43
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60
          MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS
Sbjct: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGRIKNSKGKSKCP 86
          GTYGNKHECPCYGRIKNSKGKSKCP
Sbjct: 61 GTYGNKHECPCYGRIKNSKGKSKCP 85

[Close]

BLAST of Carg11869 vs. NCBI nr
Match: XP_023546651.1 (peamaclein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.6 bits (436), Expect = 5.9e-40
Identity = 81/85 (95.29%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60
          MKFLHLLS ILVLTSFLQLSLAAPG CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS
Sbjct: 1  MKFLHLLSMILVLTSFLQLSLAAPGFCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGRIKNSKGKSKCP 86
          GTYGNKHECPCYG++KNSKGKSKCP
Sbjct: 61 GTYGNKHECPCYGQMKNSKGKSKCP 85

[Close]

BLAST of Carg11869 vs. NCBI nr
Match: XP_022997556.1 (peamaclein-like [Cucurbita maxima])

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-38
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60
          MKFLHLLS ILVLTSFLQLSLAAPG CSSKC SRCAKAGVQ+RCLKYCGICCEKCGCVPS
Sbjct: 1  MKFLHLLSIILVLTSFLQLSLAAPGFCSSKCGSRCAKAGVQNRCLKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGRIKNSKGKSKCP 86
          GTYGNKHECPCYG++KNSKGKSKCP
Sbjct: 61 GTYGNKHECPCYGQMKNSKGKSKCP 85

[Close]

BLAST of Carg11869 vs. NCBI nr
Match: XP_004142881.1 (PREDICTED: peamaclein-like [Cucumis sativus] >KGN62465.1 hypothetical protein Csa_2G354910 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35
Identity = 69/85 (81.18%), Postives = 77/85 (90.59%), Query Frame = 0


Query: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60
          MKFLHLL+W+L+LTSFL+LSL APG C  KC  RC+KAGV+DRC+KYCGICCEKCGCVPS
Sbjct: 1  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGRIKNSKGKSKCP 86
          GTYGNKHECPCYG +KNSKG SKCP
Sbjct: 61 GTYGNKHECPCYGNLKNSKGNSKCP 85

[Close]

BLAST of Carg11869 vs. NCBI nr
Match: XP_008444582.1 (PREDICTED: peamaclein-like [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 9.8e-35
Identity = 68/85 (80.00%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60
          MKFLHLL+W+L+LTSFL+LSL APG C  KC  RC+KAGV+DRC+KYCGICC KCGCVPS
Sbjct: 1  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPS 60

Query: 61 GTYGNKHECPCYGRIKNSKGKSKCP 86
          GTYGNKHECPCYG +KNSKG SKCP
Sbjct: 61 GTYGNKHECPCYGNLKNSKGNSKCP 85

[Close]

BLAST of Carg11869 vs. TAIR10
Match: AT5G59845.1 (Gibberellin-regulated family protein)

HSP 1 Score: 106.3 bits (264), Expect = 9.4e-24
Identity = 52/81 (64.20%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 6  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCG-CVPSGTYG 65
          L+  +L+ +S   LS A    C  KC  RC+KAG QDRCLKYC ICCEKC  CVPSGTYG
Sbjct: 9  LIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYG 68

Query: 66 NKHECPCYGRIKNSKGKSKCP 86
          NK ECPCY  +KNSKG SKCP
Sbjct: 69 NKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Carg11869 vs. TAIR10
Match: AT2G39540.1 (Gibberellin-regulated family protein)

HSP 1 Score: 101.3 bits (251), Expect = 3.0e-22
Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 11 LVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECP 70
          L+LTS   +  +A   C  KC  RC+KAG  + CLKYC ICC+KC CVPSGT+G+K ECP
Sbjct: 13 LLLTSSFSVLSSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECP 72

Query: 71 CYGRIKNSKGKSKCP 86
          CY  +KNSKG SKCP
Sbjct: 73 CYRDMKNSKGGSKCP 87

[Close]

BLAST of Carg11869 vs. TAIR10
Match: AT2G14900.1 (Gibberellin-regulated family protein)

HSP 1 Score: 96.3 bits (238), Expect = 9.8e-21
Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 27  CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP 86
           C  KC  RC +AG++DRCLKYCGICC+ C CVPSGTYGNKHEC CY    +SKG  KCP
Sbjct: 50  CGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of Carg11869 vs. TAIR10
Match: AT1G10588.1 (Gibberellin-regulated family protein)

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-20
Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 0


Query: 10 ILVLTSFLQLSLAAPGVCSSKCASRCAKAG-VQDRCLKYCGICCEKCGCVPSGTYGNKHE 69
          +L+ +SF  LS A    C  KC+ RC+KA    + CL+ C ICC+KC CVPSGTYGNK E
Sbjct: 14 LLLTSSFYVLSSADSSACGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDE 73

Query: 70 CPCYGRIKNSKGKSKCP 86
          CPCY  +KNSKG SKCP
Sbjct: 74 CPCYRDMKNSKGGSKCP 90

[Close]

BLAST of Carg11869 vs. TAIR10
Match: AT2G30810.1 (Gibberellin-regulated family protein)

HSP 1 Score: 70.9 bits (172), Expect = 4.4e-13
Identity = 30/62 (48.39%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 24  PGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSK 83
           P  C   C  RC+    +  CL +C  CC KC CVPSGTYG+K ECPCY      +G  K
Sbjct: 45  PEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPK 104

Query: 84  CP 86
           CP
Sbjct: 105 CP 106

[Close]

BLAST of Carg11869 vs. Swiss-Prot
Match: sp|Q948Z4|SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-26
Identity = 53/80 (66.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 6  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGN 65
          LL  +++  S +Q ++A    C SKC  RC+KAG+ DRCLKYCGICCE+C CVPSGTYGN
Sbjct: 9  LLVTLVITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGN 68

Query: 66 KHECPCYGRIKNSKGKSKCP 86
          KHECPCY   KNSKGKSKCP
Sbjct: 69 KHECPCYRDKKNSKGKSKCP 88

[Close]

BLAST of Carg11869 vs. Swiss-Prot
Match: sp|P86888|PMLN_PRUPE (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-23
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 27 CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP 86
          C SKC  RC+KAG Q+RCLKYCGICCEKC CVPSGTYGNK ECPCY  +KNSKG  KCP
Sbjct: 5  CDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKCP 63

[Close]

BLAST of Carg11869 vs. Swiss-Prot
Match: sp|Q8LFM2|GASAA_ARATH (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-22
Identity = 52/81 (64.20%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 6  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCG-CVPSGTYG 65
          L+  +L+ +S   LS A    C  KC  RC+KAG QDRCLKYC ICCEKC  CVPSGTYG
Sbjct: 9  LIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYG 68

Query: 66 NKHECPCYGRIKNSKGKSKCP 86
          NK ECPCY  +KNSKG SKCP
Sbjct: 69 NKDECPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Carg11869 vs. Swiss-Prot
Match: sp|O80641|GASA8_ARATH (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.5e-21
Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 11 LVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECP 70
          L+LTS   +  +A   C  KC  RC+KAG  + CLKYC ICC+KC CVPSGT+G+K ECP
Sbjct: 13 LLLTSSFSVLSSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECP 72

Query: 71 CYGRIKNSKGKSKCP 86
          CY  +KNSKG SKCP
Sbjct: 73 CYRDMKNSKGGSKCP 87

[Close]

BLAST of Carg11869 vs. Swiss-Prot
Match: sp|O82328|GASA7_ARATH (Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-19
Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 27  CSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGNKHECPCYGRIKNSKGKSKCP 86
           C  KC  RC +AG++DRCLKYCGICC+ C CVPSGTYGNKHEC CY    +SKG  KCP
Sbjct: 50  CGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of Carg11869 vs. TrEMBL
Match: tr|A0A0A0LKN7|A0A0A0LKN7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354910 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-35
Identity = 69/85 (81.18%), Postives = 77/85 (90.59%), Query Frame = 0


Query: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60
          MKFLHLL+W+L+LTSFL+LSL APG C  KC  RC+KAGV+DRC+KYCGICCEKCGCVPS
Sbjct: 1  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCEKCGCVPS 60

Query: 61 GTYGNKHECPCYGRIKNSKGKSKCP 86
          GTYGNKHECPCYG +KNSKG SKCP
Sbjct: 61 GTYGNKHECPCYGNLKNSKGNSKCP 85

[Close]

BLAST of Carg11869 vs. TrEMBL
Match: tr|A0A1S3BAP8|A0A1S3BAP8_CUCME (peamaclein-like OS=Cucumis melo OX=3656 GN=LOC103487854 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.5e-35
Identity = 68/85 (80.00%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 1  MKFLHLLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPS 60
          MKFLHLL+W+L+LTSFL+LSL APG C  KC  RC+KAGV+DRC+KYCGICC KCGCVPS
Sbjct: 1  MKFLHLLTWLLLLTSFLELSLGAPGFCGWKCRRRCSKAGVRDRCMKYCGICCVKCGCVPS 60

Query: 61 GTYGNKHECPCYGRIKNSKGKSKCP 86
          GTYGNKHECPCYG +KNSKG SKCP
Sbjct: 61 GTYGNKHECPCYGNLKNSKGNSKCP 85

[Close]

BLAST of Carg11869 vs. TrEMBL
Match: tr|V7AT37|V7AT37_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G069900g PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 8.5e-27
Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 6  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGN 65
          LL  +L+ +SFL++S+A  G C SKCA RCAKAGV+DRCLK+CGICCEKC CVPSGTYGN
Sbjct: 10 LLVCLLLSSSFLEISMAGSGFCDSKCARRCAKAGVKDRCLKFCGICCEKCHCVPSGTYGN 69

Query: 66 KHECPCYGRIKNSKGKSKCP 86
          K ECPCY  +KNSKGK KCP
Sbjct: 70 KDECPCYRDLKNSKGKGKCP 89

[Close]

BLAST of Carg11869 vs. TrEMBL
Match: tr|A0A2I4FQB3|A0A2I4FQB3_9ROSI (peamaclein-like OS=Juglans regia OX=51240 GN=LOC109001133 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-26
Identity = 58/80 (72.50%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 6  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGN 65
          LL  +++ +SF + + A    C SKCA+RCAKAGVQDRCLKYCGICCEKC CVPSGTYGN
Sbjct: 9  LLVCLILGSSFFEATEAGSSFCDSKCAARCAKAGVQDRCLKYCGICCEKCQCVPSGTYGN 68

Query: 66 KHECPCYGRIKNSKGKSKCP 86
          KHECPCY  +KNSKGKSKCP
Sbjct: 69 KHECPCYRDLKNSKGKSKCP 88

[Close]

BLAST of Carg11869 vs. TrEMBL
Match: tr|A0A1S3UCQ4|A0A1S3UCQ4_VIGRR (peamaclein-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106764089 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-26
Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 6  LLSWILVLTSFLQLSLAAPGVCSSKCASRCAKAGVQDRCLKYCGICCEKCGCVPSGTYGN 65
          LL  +L+  SF QLS AA G CSSKCA+RC+KAG +DRCLK+CGICC KC CVPSGTYGN
Sbjct: 9  LLLCLLLSFSFFQLSSAASGFCSSKCANRCSKAGRKDRCLKFCGICCSKCKCVPSGTYGN 68

Query: 66 KHECPCYGRIKNSKGKSKCP 86
          KHECPCY  +KNSKGK KCP
Sbjct: 69 KHECPCYRDLKNSKGKGKCP 88

The following BLAST results are available for this feature:

BLAST of Carg11869 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961995.1	9.8e-43	100.00	peamaclein-like [Cucurbita moschata]	[more]
XP_023546651.1	5.9e-40	95.29	peamaclein [Cucurbita pepo subsp. pepo]	[more]
XP_022997556.1	1.1e-38	92.94	peamaclein-like [Cucurbita maxima]	[more]
XP_004142881.1	1.5e-35	81.18	PREDICTED: peamaclein-like [Cucumis sativus] >KGN62465.1 hypothetical protein Cs...	[more]
XP_008444582.1	9.8e-35	80.00	PREDICTED: peamaclein-like [Cucumis melo]	[more]

BLAST of Carg11869 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59845.1	9.4e-24	64.20	Gibberellin-regulated family protein	[more]
AT2G39540.1	3.0e-22	60.00	Gibberellin-regulated family protein	[more]
AT2G14900.1	9.8e-21	67.80	Gibberellin-regulated family protein	[more]
AT1G10588.1	1.3e-20	58.44	Gibberellin-regulated family protein	[more]
AT2G30810.1	4.4e-13	48.39	Gibberellin-regulated family protein	[more]

BLAST of Carg11869 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q948Z4\|SNAK1_SOLTU	3.3e-26	66.25	Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1	[more]
sp\|P86888\|PMLN_PRUPE	2.0e-23	77.97	Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1	[more]
sp\|Q8LFM2\|GASAA_ARATH	1.7e-22	64.20	Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 ...	[more]
sp\|O80641\|GASA8_ARATH	5.5e-21	60.00	Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=...	[more]
sp\|O82328\|GASA7_ARATH	1.8e-19	67.80	Gibberellin-regulated protein 7 OS=Arabidopsis thaliana OX=3702 GN=GASA7 PE=3 SV...	[more]

BLAST of Carg11869 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LKN7\|A0A0A0LKN7_CUCSA	1.0e-35	81.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354910 PE=4 SV=1	[more]
tr\|A0A1S3BAP8\|A0A1S3BAP8_CUCME	6.5e-35	80.00	peamaclein-like OS=Cucumis melo OX=3656 GN=LOC103487854 PE=4 SV=1	[more]
tr\|V7AT37\|V7AT37_PHAVU	8.5e-27	72.50	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G069900g PE=4 ...	[more]
tr\|A0A2I4FQB3\|A0A2I4FQB3_9ROSI	1.4e-26	72.50	peamaclein-like OS=Juglans regia OX=51240 GN=LOC109001133 PE=4 SV=1	[more]
tr\|A0A1S3UCQ4\|A0A1S3UCQ4_VIGRR	1.4e-26	73.75	peamaclein-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106764089 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003854	GASA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11869-RA	Carg11869-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 27..85 e-value: 1.7E-21 score: 76.0
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 6..85
None	No IPR available	PANTHER	PTHR23201:SF10	GIBBERELLIN-REGULATED GASA/GAST/SNAKIN FAMILY PROTEIN-RELATED	coord: 6..85

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11869	Cla022611	Watermelon (97103) v1	carwmB0172
Carg11869	Cla013995	Watermelon (97103) v1	carwmB0176
Carg11869	Csa2G354910	Cucumber (Chinese Long) v2	carcuB0202
Carg11869	Csa7G071570	Cucumber (Chinese Long) v2	carcuB0207
Carg11869	Csa6G493840	Cucumber (Chinese Long) v2	carcuB0205
Carg11869	MELO3C007600	Melon (DHL92) v3.5.1	carmeB0188
Carg11869	MELO3C018503	Melon (DHL92) v3.5.1	carmeB0185
Carg11869	MELO3C010822	Melon (DHL92) v3.5.1	carmeB0186
Carg11869	ClCG08G016310	Watermelon (Charleston Gray)	carwcgB0178
Carg11869	ClCG01G017220	Watermelon (Charleston Gray)	carwcgB0173
Carg11869	CSPI07G07040	Wild cucumber (PI 183967)	carcpiB0214
Carg11869	CSPI06G28580	Wild cucumber (PI 183967)	carcpiB0212
Carg11869	Cucsa.102860	Cucumber (Gy14) v1	carcgyB0219
Carg11869	Cucsa.219320	Cucumber (Gy14) v1	carcgyB0221
Carg11869	Cucsa.395790	Cucumber (Gy14) v1	carcgyB0225
Carg11869	CmaCh05G001550	Cucurbita maxima (Rimu)	carcmaB0256
Carg11869	CmaCh11G017140	Cucurbita maxima (Rimu)	carcmaB0248
Carg11869	CmaCh07G006730	Cucurbita maxima (Rimu)	carcmaB0257
Carg11869	CmoCh07G006840	Cucurbita moschata (Rifu)	carcmoB0264
Carg11869	CmoCh05G001560	Cucurbita moschata (Rifu)	carcmoB0263
Carg11869	CmoCh11G014010	Cucurbita moschata (Rifu)	carcmoB0256
Carg11869	Lsi08G015100	Bottle gourd (USVL1VR-Ls)	carlsiB164
Carg11869	Lsi01G009320	Bottle gourd (USVL1VR-Ls)	carlsiB161
Carg11869	Cp4.1LG19g10930	Cucurbita pepo (Zucchini)	carcpeB0264
Carg11869	Cp4.1LG04g07650	Cucurbita pepo (Zucchini)	carcpeB0266
Carg11869	Cp4.1LG11g01270	Cucurbita pepo (Zucchini)	carcpeB0263
Carg11869	CsGy2G018580	Cucumber (Gy14) v2	carcgybB0195
Carg11869	CsGy6G028060	Cucumber (Gy14) v2	carcgybB0198
Carg11869	CsGy7G006610	Cucumber (Gy14) v2	carcgybB0199
Carg11869	MELO3C007600.2	Melon (DHL92) v3.6.1	carmedB0192
Carg11869	MELO3C010822.2	Melon (DHL92) v3.6.1	carmedB0190
Carg11869	MELO3C018503.2	Melon (DHL92) v3.6.1	carmedB0189
Carg11869	CsaV3_6G043760	Cucumber (Chinese Long) v3	carcucB0212
Carg11869	CsaV3_2G026300	Cucumber (Chinese Long) v3	carcucB0209
Carg11869	Cla97C01G016400	Watermelon (97103) v2	carwmbB0185
Carg11869	Cla97C08G160010	Watermelon (97103) v2	carwmbB0190
Carg11869	Bhi04G000374	Wax gourd	carwgoB0231
Carg11869	Bhi03G000750	Wax gourd	carwgoB0233

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11869	Wax gourd	carwgoB0236
Carg11869	Silver-seed gourd	carcarB216
Carg11869	Silver-seed gourd	carcarB217
Carg11869	Silver-seed gourd	carcarB218
Carg11869	Silver-seed gourd	carcarB224
Carg11869	Cucumber (Gy14) v2	carcgybB0197
Carg11869	Cucumber (Gy14) v1	carcgyB0224
Carg11869	Cucurbita maxima (Rimu)	carcmaB0254
Carg11869	Cucurbita maxima (Rimu)	carcmaB0247
Carg11869	Cucurbita maxima (Rimu)	carcmaB0249
Carg11869	Cucurbita maxima (Rimu)	carcmaB0251
Carg11869	Cucurbita maxima (Rimu)	carcmaB0253
Carg11869	Cucurbita maxima (Rimu)	carcmaB0255
Carg11869	Cucurbita moschata (Rifu)	carcmoB0255
Carg11869	Cucurbita moschata (Rifu)	carcmoB0257
Carg11869	Cucurbita moschata (Rifu)	carcmoB0258
Carg11869	Cucurbita moschata (Rifu)	carcmoB0259
Carg11869	Cucurbita moschata (Rifu)	carcmoB0262
Carg11869	Cucurbita pepo (Zucchini)	carcpeB0261
Carg11869	Cucurbita pepo (Zucchini)	carcpeB0265
Carg11869	Cucurbita pepo (Zucchini)	carcpeB0267
Carg11869	Cucurbita pepo (Zucchini)	carcpeB0268
Carg11869	Wild cucumber (PI 183967)	carcpiB0209
Carg11869	Wild cucumber (PI 183967)	carcpiB0211
Carg11869	Cucumber (Chinese Long) v2	carcuB0204
Carg11869	Cucumber (Chinese Long) v3	carcucB0211
Carg11869	Bottle gourd (USVL1VR-Ls)	carlsiB162
Carg11869	Melon (DHL92) v3.5.1	carmeB0187
Carg11869	Melon (DHL92) v3.6.1	carmedB0191
Carg11869	Watermelon (Charleston Gray)	carwcgB0175
Carg11869	Watermelon (97103) v1	carwmB0173
Carg11869	Watermelon (97103) v2	carwmbB0187