Carg11850 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCCATCTCTTTACTTCTTCTGTTTGGTTGGGTTTCTGGTGTTGGATGGCTTGTGCTCAACGCCTCAGACTAATGAAACCCACCTGAGATGTTCCGGCGACCACCCAAAAAGAGCAGTGAAGATGGGAGTTATTGCTGATAATAGCTCAAGAGTGGGGAGGGAACAGATTGTAGCCATTCACATGGCTTTCAAACAATATCCTCTTTTTTCTAATTCATGCCACAAGGTTGAGTTCCTCCTCGAGGATTCTCCCGACAACTCCACTCAGGCTGTCGCTACCGGTAAGATCAACCATTTCTCTACCGCTCATTCTATCGTCACTGTTGAGAATTGTTGGGAGAGAGTCTACATTGACTAATTTAGGAGAACCCACAACAAAATCACTAGAATTTATACTCAAAGTAGACGCGACAATATCTTAAAGATTGTGAAAGAGACATGATTTCTAACCATCAACTTATTCAATCCTAAAACTTTGAAATTCCTAAAAAAGAAAAAAATTCCAAATGTTAATTAAATATAGTCAAAATTGTTCAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCTAATTGTTTATCTGTATAACAGCTTTAAATCTAATTACACACAAAAGAGTGAAAGCCATGATTGGAACATTGACAAGGGAGGAAGTATCTTCAATCTTTGAGCTCCACAAAGCCTCCAAGAATATCCCTATCATATCGTTATCTTCAGCTTCCATAGTACCACCACCGACGAAGCAGATTCCGACGTCATTTCTTCAAATGGCTAACGATATCACCCAACAAATA ATGTTTCCATCTCTTTACTTCTTCTGTTTGGTTGGGTTTCTGGTGTTGGATGGCTTGTGCTCAACGCCTCAGACTAATGAAACCCACCTGAGATGTTCCGGCGACCACCCAAAAAGAGCAGTGAAGATGGGAGTTATTGCTGATAATAGCTCAAGAGTGGGGAGGGAACAGATTGTAGCCATTCACATGGCTTTCAAACAATATCCTCTTTTTTCTAATTCATGCCACAAGGTTGAAGTGAAAGCCATGATTGGAACATTGACAAGGGAGGAAGTATCTTCAATCTTTGAGCTCCACAAAGCCTCCAAGAATATCCCTATCATATCGTTATCTTCAGCTTCCATAGTACCACCACCGACGAAGCAGATTCCGACGTCATTTCTTCAAATGGCTAACGATATCACCCAACAAATA ATGTTTCCATCTCTTTACTTCTTCTGTTTGGTTGGGTTTCTGGTGTTGGATGGCTTGTGCTCAACGCCTCAGACTAATGAAACCCACCTGAGATGTTCCGGCGACCACCCAAAAAGAGCAGTGAAGATGGGAGTTATTGCTGATAATAGCTCAAGAGTGGGGAGGGAACAGATTGTAGCCATTCACATGGCTTTCAAACAATATCCTCTTTTTTCTAATTCATGCCACAAGGTTGAAGTGAAAGCCATGATTGGAACATTGACAAGGGAGGAAGTATCTTCAATCTTTGAGCTCCACAAAGCCTCCAAGAATATCCCTATCATATCGTTATCTTCAGCTTCCATAGTACCACCACCGACGAAGCAGATTCCGACGTCATTTCTTCAAATGGCTAACGATATCACCCAACAAATA MFPSLYFFCLVGFLVLDGLCSTPQTNETHLRCSGDHPKRAVKMGVIADNSSRVGREQIVAIHMAFKQYPLFSNSCHKVEVKAMIGTLTREEVSSIFELHKASKNIPIISLSSASIVPPPTKQIPTSFLQMANDITQQI
BLAST of Carg11850 vs. NCBI nr
Match: XP_022997326.1 (LOW QUALITY PROTEIN: glutamate receptor 2.7-like [Cucurbita maxima]) HSP 1 Score: 250.8 bits (639), Expect = 2.8e-63 Identity = 132/163 (80.98%), Postives = 134/163 (82.21%), Query Frame = 0
BLAST of Carg11850 vs. NCBI nr
Match: XP_022961655.1 (glutamate receptor 2.7-like isoform X4 [Cucurbita moschata]) HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61 Identity = 131/165 (79.39%), Postives = 134/165 (81.21%), Query Frame = 0
BLAST of Carg11850 vs. NCBI nr
Match: XP_022961654.1 (glutamate receptor 2.6-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 166.0 bits (419), Expect = 9.0e-38 Identity = 99/160 (61.88%), Postives = 112/160 (70.00%), Query Frame = 0
BLAST of Carg11850 vs. NCBI nr
Match: XP_022961652.1 (glutamate receptor 2.7-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 162.9 bits (411), Expect = 7.6e-37 Identity = 99/168 (58.93%), Postives = 112/168 (66.67%), Query Frame = 0
BLAST of Carg11850 vs. NCBI nr
Match: XP_022961653.1 (glutamate receptor 2.7-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 162.9 bits (411), Expect = 7.6e-37 Identity = 99/168 (58.93%), Postives = 112/168 (66.67%), Query Frame = 0
BLAST of Carg11850 vs. TrEMBL
Match: tr|A0A1S4DVG0|A0A1S4DVG0_CUCME (glutamate receptor 2.7-like OS=Cucumis melo OX=3656 GN=LOC107990714 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.5e-28 Identity = 91/169 (53.85%), Postives = 110/169 (65.09%), Query Frame = 0
BLAST of Carg11850 vs. TrEMBL
Match: tr|A0A0A0LP35|A0A0A0LP35_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357250 PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27 Identity = 92/172 (53.49%), Postives = 112/172 (65.12%), Query Frame = 0
BLAST of Carg11850 vs. TrEMBL
Match: tr|A0A1S3BBK5|A0A1S3BBK5_CUCME (glutamate receptor 2.5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487888 PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.2e-24 Identity = 76/166 (45.78%), Postives = 94/166 (56.63%), Query Frame = 0
BLAST of Carg11850 vs. TrEMBL
Match: tr|A0A1S3BBH6|A0A1S3BBH6_CUCME (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103487888 PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.2e-24 Identity = 76/166 (45.78%), Postives = 94/166 (56.63%), Query Frame = 0
BLAST of Carg11850 vs. TrEMBL
Match: tr|A0A0A0LL89|A0A0A0LL89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G357260 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.3e-21 Identity = 71/154 (46.10%), Postives = 86/154 (55.84%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |