Carg11835 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11835
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	uroporphyrinogen-III synthase, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_036 : 369430 .. 371163 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCATACGCCTTCTGTTGTTCCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTTGCCTGTTTCTCCTCCACTTTGACTTCTTCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACCAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTCTGGTAAATTTTCATTCCTCTCGATTTTGTAATCAGAGGATGTTTTGTTCAGATTGTTGATTTATCTTTTGATTCCTGGAGCCTTTTTTTTGCTTTGTTCTCGTTCGCCAGTTTGATTCTCATTCTACTTAGGCAGTGTGTTAATCTCTTATATACATGTGATGCATCGATTTGTAAGTCGACGCGTTTGACTAAATGTTGGAATAAATGCTGGTTGTTCGAGTCTTTTGGTTAATTGTTGCCTTCTCATGTTCTTCACCGATTTTCTAGATCTTTCCGAAATTGTTAATCATTTTGAGACTCATTACTACCGTTACATCTGCTGGAATATTGTTGTTATTGTCTTTTTGGAGAAGATGAGGAATGTGCACTTTAGTGAACGTTTCTTGCCGCTGAAGTAAATTAGAACTGTAATAGTTTGTAAGTTCCAATGTAGTTTCTGTTTTCCAAAAATTAAAATGTATTTTACCATCAGTTGTAAGATAAGAACGCCTCTAACATCAAATGTGCTGATCTATACTCGAAAGTAGCCTCAATATGAGATTAAGGTCAGTGCTTAGGTATATTATCAGAACTATATTGAACCATTCCATCGCTGCATGCGGTGGTAAATTTCTTGTTAATCTCAGTTCTTTTTTTTTTTTTTTTCATACAATAGCTTATTCGTAATAGCTGCTCTGCATTGTTGATTTTAGGGCGTTGATATTGAGAATATTGTTCTTTTTTATTGGATGCGTATAGTACTTTCGTGGTGATTAGTGCTTCAATAGGTACTATGAATCCTGTTCATTGCGTAGTCTCTCGTAGTATTTCATCCAGGAAACCGATCTATTGCTTCAATCAAGAATAGGTAGGGTAGGATGGAGAAAAGACATGATGTTTTATTTTGAACTTTTGTCCATTATCATCCACTAATGGATGAATATTTCTGACATGGACATATTTGTTACATAACTTAAAGTTACTGATGTTTTACTCTACATACCATTGCTTCTCTCCTTAATTTCCTTTTTTTTCCCCTAAAAAAACATTCCTCGACTATTCTTTAACAAACCTCCTGTGAAGGTAAAATAATAGATATTTTTGCGTGGATGAGCAAGCTACAATCCAATCTATGAAGTTTGAAAGCAATATAAACCAGACTATTGATATTTCTGATGTTGATCGCAGGCAAGACATGGAATAAACTGTTTGGAGCTTCCCCTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGGTACGTCCTTCAGGATTGGTTTTCTCTTCTCGCTCTCCTCAAAATCTCACTATCCTCGTTCAACTGATTCTTTCTATCTCAAATGCACGCCTATATTTATTAGTAATTTTCAATGTACCACAGAATATTTGGAAGACTATTAATTGGCACAACCGCTTACAATCTTCTTTCCCTCTTCATTAACAGATTCTGTATTTGATTGGATCATTATAACCTCCCCTGAAGCTGGCTTGGTGTTCCTACAGGCATGGAAGTAA

mRNA sequence

ATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCATACGCCTTCTGTTGTTCCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTTGCCTGTTTCTCCTCCACTTTGACTTCTTCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACCAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTCTGGCAAGACATGGAATAAACTGTTTGGAGCTTCCCCTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGATTCTGTATTTGATTGGATCATTATAACCTCCCCTGAAGCTGGCTTGGTGTTCCTACAGGCATGGAAGTAA

Coding sequence (CDS)

ATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCATACGCCTTCTGTTGTTCCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTTGCCTGTTTCTCCTCCACTTTGACTTCTTCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACCAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTCTGGCAAGACATGGAATAAACTGTTTGGAGCTTCCCCTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGATTCTGTATTTGATTGGATCATTATAACCTCCCCTGAAGCTGGCTTGGTGTTCCTACAGGCATGGAAGTAA

Protein sequence

MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWK

Homology

[Close]

BLAST of Carg11835 vs. NCBI nr
Match: XP_022962039.1 (uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita moschata] >XP_022962040.1 uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 248.1 bits (632), Expect = 1.6e-62
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV 60
           MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV
Sbjct: 16  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV 75

Query: 61  TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV 120
           TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV
Sbjct: 76  TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV 135

Query: 121 FLQAWK 127
           FLQAWK
Sbjct: 136 FLQAWK 141

[Close]

BLAST of Carg11835 vs. NCBI nr
Match: XP_022996969.1 (uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 248.1 bits (632), Expect = 1.6e-62
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV 60
           MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV
Sbjct: 16  MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV 75

Query: 61  TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV 120
           TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV
Sbjct: 76  TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV 135

Query: 121 FLQAWK 127
           FLQAWK
Sbjct: 136 FLQAWK 141

[Close]

BLAST of Carg11835 vs. NCBI nr
Match: XP_023547155.1 (uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-60
Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV 60
           MAPVSLSSFS TPSVV SPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV
Sbjct: 17  MAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV 76

Query: 61  TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV 120
           TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV
Sbjct: 77  TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV 136

Query: 121 FLQAWK 127
           FLQAWK
Sbjct: 137 FLQAWK 142

[Close]

BLAST of Carg11835 vs. NCBI nr
Match: XP_008444646.1 (PREDICTED: uroporphyrinogen-III synthase, chloroplastic [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 4.6e-49
Identity = 109/129 (84.50%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MAPVSLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFSST--LTSSASITSSSISAPK 60
           MA VSLSSFSH PS VVPSPC LQ YRRILLPRRTLAC SS    +SS+SITS SISAPK
Sbjct: 1   MASVSLSSFSHPPSVVVPSPC-LQFYRRILLPRRTLACSSSAWISSSSSSITSMSISAPK 60

Query: 61  VVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEA 120
           VVVTRERGKNGKL++ALARHGINCLELPLIQH QGPDLNRL SVLSD+VFDWI+ITSPEA
Sbjct: 61  VVVTRERGKNGKLVNALARHGINCLELPLIQHRQGPDLNRLQSVLSDTVFDWIVITSPEA 120

Query: 121 GLVFLQAWK 127
           GLVFL+AWK
Sbjct: 121 GLVFLEAWK 128

[Close]

BLAST of Carg11835 vs. NCBI nr
Match: XP_022144140.1 (uroporphyrinogen-III synthase, chloroplastic [Momordica charantia])

HSP 1 Score: 191.4 bits (485), Expect = 1.8e-45
Identity = 105/130 (80.77%), Postives = 112/130 (86.15%), Query Frame = 0


Query: 1   MAPV---SLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAP 60
           MAPV   SLSS SH PS VVPSPC LQL RRILLPRRT +C SS   +S   TSSSISAP
Sbjct: 1   MAPVSLSSLSSLSHPPSVVVPSPC-LQLCRRILLPRRTPSCSSS---ASIPTTSSSISAP 60

Query: 61  KVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPE 120
           KVVVTRERGKNGKL++ALA+HGINCLELPLIQH QGPDLNRLHSVL DSVFDWI+ITSPE
Sbjct: 61  KVVVTRERGKNGKLVNALAKHGINCLELPLIQHRQGPDLNRLHSVLGDSVFDWIVITSPE 120

Query: 121 AGLVFLQAWK 127
           AGLVFL+AWK
Sbjct: 121 AGLVFLEAWK 126

[Close]

BLAST of Carg11835 vs. TAIR10
Match: AT2G26540.1 (uroporphyrinogen-III synthase family protein)

HSP 1 Score: 111.7 bits (278), Expect = 3.3e-25
Identity = 51/71 (71.83%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 56  PKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSP 115
           P+VVVTRERGKN ++I AL ++GI+ LELPLIQH++GPD +RL SVL+D  FDWIIITSP
Sbjct: 65  PQVVVTRERGKNNQIIKALEKNGISSLELPLIQHARGPDFDRLASVLNDKSFDWIIITSP 124

Query: 116 EAGLVFLQAWK 127
           EAG VFL+AWK
Sbjct: 125 EAGSVFLEAWK 135

[Close]

BLAST of Carg11835 vs. Swiss-Prot
Match: sp|O48721|HEM4_ARATH (Uroporphyrinogen-III synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=UROS PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 6.0e-24
Identity = 51/71 (71.83%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 56  PKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSP 115
           P+VVVTRERGKN ++I AL ++GI+ LELPLIQH++GPD +RL SVL+D  FDWIIITSP
Sbjct: 65  PQVVVTRERGKNNQIIKALEKNGISSLELPLIQHARGPDFDRLASVLNDKSFDWIIITSP 124

Query: 116 EAGLVFLQAWK 127
           EAG VFL+AWK
Sbjct: 125 EAGSVFLEAWK 135

[Close]

BLAST of Carg11835 vs. Swiss-Prot
Match: sp|Q10QR9|HEM4_ORYSJ (Uroporphyrinogen-III synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=UROS PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 48  ITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVF 107
           I  SS     VVVTRERGKN KLI AL +H +  LELPLI+H +GPD +RL +VL D  F
Sbjct: 39  IACSSPXXXXVVVTRERGKNAKLIAALEKHNVQSLELPLIKHVEGPDTDRLSAVLRDEKF 98

Query: 108 DWIIITSPEAGLVFLQAWK 127
           DWI ITSPEA  VFL+ WK
Sbjct: 99  DWITITSPEAAAVFLEGWK 117

[Close]

BLAST of Carg11835 vs. TrEMBL
Match: tr|A0A1S3BBN0|A0A1S3BBN0_CUCME (uroporphyrinogen-III synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487917 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.1e-49
Identity = 109/129 (84.50%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MAPVSLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFSST--LTSSASITSSSISAPK 60
           MA VSLSSFSH PS VVPSPC LQ YRRILLPRRTLAC SS    +SS+SITS SISAPK
Sbjct: 1   MASVSLSSFSHPPSVVVPSPC-LQFYRRILLPRRTLACSSSAWISSSSSSITSMSISAPK 60

Query: 61  VVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEA 120
           VVVTRERGKNGKL++ALARHGINCLELPLIQH QGPDLNRL SVLSD+VFDWI+ITSPEA
Sbjct: 61  VVVTRERGKNGKLVNALARHGINCLELPLIQHRQGPDLNRLQSVLSDTVFDWIVITSPEA 120

Query: 121 GLVFLQAWK 127
           GLVFL+AWK
Sbjct: 121 GLVFLEAWK 128

[Close]

BLAST of Carg11835 vs. TrEMBL
Match: tr|A0A0A0LLB2|A0A0A0LLB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360600 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.2e-42
Identity = 98/128 (76.56%), Postives = 102/128 (79.69%), Query Frame = 0


Query: 1   MAPVSLSSFSHTPS-VVPSPCLLQLYRRILLPRRTLACFS-STLTSSASITSSSISAPKV 60
           MA VSLSSFSH PS VVPSPC LQ Y RILLPRRTLAC S                  KV
Sbjct: 1   MASVSLSSFSHPPSVVVPSPC-LQFYGRILLPRRTLACSSXXXXXXXXXXXXXXXXXXKV 60

Query: 61  VVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAG 120
           VVTRERGKNGKL++ALARHGINCLELPLIQH QGPDLNRLHSVLSDSVFDWI+ITSPEAG
Sbjct: 61  VVTRERGKNGKLVNALARHGINCLELPLIQHRQGPDLNRLHSVLSDSVFDWIVITSPEAG 120

Query: 121 LVFLQAWK 127
           LVFL+AWK
Sbjct: 121 LVFLEAWK 127

[Close]

BLAST of Carg11835 vs. TrEMBL
Match: tr|B9MVK7|B9MVK7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G034700v3 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-31
Identity = 81/127 (63.78%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 1   MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV 60
           MAP  +S FS  PS+  S   LQL+RR          FS +L +SAS +S+S SAPKVVV
Sbjct: 1   MAP-PVSPFSLAPSLSSSSSCLQLHRRF---------FSPSLRTSASASSTSNSAPKVVV 60

Query: 61  TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVL-SDSVFDWIIITSPEAGL 120
           TRERGKNGKLI ALA++GI+CLELPLIQH+QGPD ++L SVL +DS FDWII+TSPEAG 
Sbjct: 61  TRERGKNGKLIKALAKYGISCLELPLIQHTQGPDSDKLSSVLCADSAFDWIIVTSPEAGS 117

Query: 121 VFLQAWK 127
           VFL+AWK
Sbjct: 121 VFLEAWK 117

[Close]

BLAST of Carg11835 vs. TrEMBL
Match: tr|A0A061FC01|A0A061FC01_THECC (Uroporphyrinogen-III synthase family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_033898 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 72/105 (68.57%), Postives = 81/105 (77.14%), Query Frame = 0


Query: 22  LQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINC 81
           LQL+ RI      +   SS+LTS   I  +  S PKVVVTRERGKN KLIDALA HGINC
Sbjct: 25  LQLHSRISFSPSRIGASSSSLTSQV-IQHTPTSNPKVVVTRERGKNSKLIDALAEHGINC 84

Query: 82  LELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWK 127
           LELPLIQH+QGPD +RL SVLS++ FDWIIITSPEAG VFL+AWK
Sbjct: 85  LELPLIQHTQGPDFDRLASVLSETAFDWIIITSPEAGSVFLEAWK 128

[Close]

BLAST of Carg11835 vs. TrEMBL
Match: tr|A0A061FB29|A0A061FB29_THECC (Uroporphyrinogen-III synthase family protein isoform 5 OS=Theobroma cacao OX=3641 GN=TCM_033898 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 72/105 (68.57%), Postives = 81/105 (77.14%), Query Frame = 0


Query: 22  LQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINC 81
           LQL+ RI      +   SS+LTS   I  +  S PKVVVTRERGKN KLIDALA HGINC
Sbjct: 25  LQLHSRISFSPSRIGASSSSLTSQV-IQHTPTSNPKVVVTRERGKNSKLIDALAEHGINC 84

Query: 82  LELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWK 127
           LELPLIQH+QGPD +RL SVLS++ FDWIIITSPEAG VFL+AWK
Sbjct: 85  LELPLIQHTQGPDFDRLASVLSETAFDWIIITSPEAGSVFLEAWK 128

The following BLAST results are available for this feature:

BLAST of Carg11835 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962039.1	1.6e-62	100.00	uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita moschata] >XP_02296...	[more]
XP_022996969.1	1.6e-62	100.00	uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita maxima]	[more]
XP_023547155.1	1.2e-60	98.41	uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_008444646.1	4.6e-49	84.50	PREDICTED: uroporphyrinogen-III synthase, chloroplastic [Cucumis melo]	[more]
XP_022144140.1	1.8e-45	80.77	uroporphyrinogen-III synthase, chloroplastic [Momordica charantia]	[more]

BLAST of Carg11835 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26540.1	3.3e-25	71.83	uroporphyrinogen-III synthase family protein	[more]

BLAST of Carg11835 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O48721\|HEM4_ARATH	6.0e-24	71.83	Uroporphyrinogen-III synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q10QR9\|HEM4_ORYSJ	1.4e-20	62.03	Uroporphyrinogen-III synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Carg11835 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BBN0\|A0A1S3BBN0_CUCME	3.1e-49	84.50	uroporphyrinogen-III synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
tr\|A0A0A0LLB2\|A0A0A0LLB2_CUCSA	6.2e-42	76.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360600 PE=4 SV=1	[more]
tr\|B9MVK7\|B9MVK7_POPTR	2.9e-31	63.78	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G034700v3 PE=...	[more]
tr\|A0A061FC01\|A0A061FC01_THECC	2.1e-29	68.57	Uroporphyrinogen-III synthase family protein isoform 1 OS=Theobroma cacao OX=364...	[more]
tr\|A0A061FB29\|A0A061FB29_THECC	2.1e-29	68.57	Uroporphyrinogen-III synthase family protein isoform 5 OS=Theobroma cacao OX=364...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004852	uroporphyrinogen-III synthase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0033014	tetrapyrrole biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036108	4pyrrol_syn_uPrphyn_synt_sf
IPR003754	4pyrrol_synth_uPrphyn_synth

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0033014	tetrapyrrole biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004852	uroporphyrinogen-III synthase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11835-RA	Carg11835-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	PFAM	PF02602	HEM4	coord: 70..126 e-value: 2.1E-9 score: 37.0
None	No IPR available	GENE3D	G3DSA:3.40.50.10090		coord: 43..126 e-value: 8.1E-10 score: 40.7
None	No IPR available	PANTHER	PTHR45501	FAMILY NOT NAMED	coord: 3..126
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	SUPERFAMILY	SSF69618	HemD-like	coord: 56..124

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11835	Silver-seed gourd	carcarB119
Carg11835	Silver-seed gourd	carcarB215
Carg11835	Silver-seed gourd	carcarB218
Carg11835	Silver-seed gourd	carcarB224
Carg11835	Silver-seed gourd	carcarB225
Carg11835	Cucumber (Gy14) v2	carcgybB0195
Carg11835	Cucumber (Gy14) v2	carcgybB0198
Carg11835	Cucumber (Gy14) v1	carcgyB0219
Carg11835	Cucumber (Gy14) v1	carcgyB0222
Carg11835	Cucurbita maxima (Rimu)	carcmaB0254
Carg11835	Cucurbita maxima (Rimu)	carcmaB0247
Carg11835	Cucurbita maxima (Rimu)	carcmaB0249
Carg11835	Cucurbita maxima (Rimu)	carcmaB0256
Carg11835	Cucurbita maxima (Rimu)	carcmaB0257
Carg11835	Cucurbita moschata (Rifu)	carcmoB0255
Carg11835	Cucurbita moschata (Rifu)	carcmoB0257
Carg11835	Cucurbita moschata (Rifu)	carcmoB0262
Carg11835	Cucurbita moschata (Rifu)	carcmoB0263
Carg11835	Cucurbita moschata (Rifu)	carcmoB0264
Carg11835	Cucurbita pepo (Zucchini)	carcpeB0261
Carg11835	Cucurbita pepo (Zucchini)	carcpeB0263
Carg11835	Cucurbita pepo (Zucchini)	carcpeB0264
Carg11835	Cucurbita pepo (Zucchini)	carcpeB0265
Carg11835	Cucurbita pepo (Zucchini)	carcpeB0267
Carg11835	Cucurbita pepo (Zucchini)	carcpeB0268
Carg11835	Wild cucumber (PI 183967)	carcpiB0209
Carg11835	Wild cucumber (PI 183967)	carcpiB0212
Carg11835	Cucumber (Chinese Long) v2	carcuB0202
Carg11835	Cucumber (Chinese Long) v2	carcuB0205
Carg11835	Cucumber (Chinese Long) v3	carcucB0209
Carg11835	Cucumber (Chinese Long) v3	carcucB0212
Carg11835	Bottle gourd (USVL1VR-Ls)	carlsiB161
Carg11835	Bottle gourd (USVL1VR-Ls)	carlsiB164
Carg11835	Melon (DHL92) v3.5.1	carmeB0186
Carg11835	Melon (DHL92) v3.5.1	carmeB0188
Carg11835	Melon (DHL92) v3.6.1	carmedB0190
Carg11835	Melon (DHL92) v3.6.1	carmedB0192
Carg11835	Watermelon (Charleston Gray)	carwcgB0173
Carg11835	Watermelon (Charleston Gray)	carwcgB0178
Carg11835	Watermelon (97103) v1	carwmB0172
Carg11835	Watermelon (97103) v1	carwmB0176
Carg11835	Watermelon (97103) v2	carwmbB0185
Carg11835	Watermelon (97103) v2	carwmbB0190
Carg11835	Wax gourd	carwgoB0235
Carg11835	Wax gourd	carwgoB0231