Carg11819 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTCAGCTATTTGCGATGAGCAATGTAGCCTCCATGGAGGTGTCTGTGATAATGGCGTTTGCGAGTTTCGTTGTTCGGATTATGCTGGCTATTCGTGCCAGAACAGCTCCAGGCTTCTTTCGAGTCTCTCTGTTTGTAAAAATGTACTGCAAAGGGATATGACTGGCCAACATTGTGCACCCAGTGAACTGAGTATACTACAGCAGCTCGAGGAAGTTGTTGTCATGCCGAATTACCACCGTTTGTTTCCCGGTGGTGCCCGGAAACTTTTTAACATCTTCGGTGGTAGCTACTGCGACGCAGCTGCAAAACAGTTGGCTTGCTGGGTACGCAGACGCCGTCTCCAAACCACGCTCTTATCTCTACATTTCTTCCTTCACCTGATATTTGGAGTTCATCTATTCTTTTTGTATGCAGATTTCGATACAAAAGTGTGACGAAGACGGCGACAACAGACTCCGAGTATGCCATTCGGCTTGTCAGTCATACAATCTAGCATGTGGGGCATCACTCGACTGCTCCGACCAGACCCTTTTCAACAGTGAGGAGGAAGGCGAAGGGCAGTGCACAGGGTCCGGTGAGATCAAACTGTCGTGGTTTAATCGACTACGCAGTAACTTATTCGTAAGTAACAGCTCGTCGAAAGGAAGGTCTGTAAAGTAAAATAGTTACTTGTAGTAGGGTGATGTCTTAACTTAGGGTAGAGTTGGGGAAGCAAATGCCCCTTAGATTTAGATTTTCAGTTGTGATCAGCCCAAAATGATTTGAGAAAAGAATTGGGTTGAGAAGTAAGTGGCTAAGATGTAGGGCTTTCAAAGATGAAAGCTTTTTGTAGAGAGAATTTCCGAAGTGTATGAAACCCATGAGAGACAAAAAATGAGACAAACAAAAACAAAGAGTGAAGGTGGAAAAAGCTTTGTTCATGTATAACATAAATTGGCCGAAGGCCCTTCAAAGAGTACAAAGAAGAGAAAAAAAAGCTCTCTTTCTTTTAAGCGTTAGAATTTCTATATGC ATGTTCTCAGCTATTTGCGATGAGCAATGTAGCCTCCATGGAGGTGTCTGTGATAATGGCGTTTGCGAGTTTCGTTGTTCGGATTATGCTGGCTATTCGTGCCAGAACAGCTCCAGGCTTCTTTCGAGTCTCTCTGTTTGTAAAAATGTACTGCAAAGGGATATGACTGGCCAACATTGTGCACCCAGTGAACTGAGTATACTACAGCAGCTCGAGGAAGTTGTTGTCATGCCGAATTACCACCGTTTGTTTCCCGGTGGTGCCCGGAAACTTTTTAACATCTTCGGTGGTAGCTACTGCGACGCAGCTGCAAAACAGTTGGCTTGCTGGATTTCGATACAAAAGTGTGACGAAGACGGCGACAACAGACTCCGAGTATGCCATTCGGCTTGTCAGTCATACAATCTAGCATGTGGGGCATCACTCGACTGCTCCGACCAGACCCTTTTCAACAGTGAGGAGGAAGGCGAAGGGCAGTGCACAGGGTCCGGTGAGATCAAACTGTCGTGGTTTAATCGACTACGCAGTAACTTATTCGTAAGTAACAGCTCGTCGAAAGGAAGGTCTGTAAAGTAAAATAGTTACTTGTAGTAGGGTGATGTCTTAACTTAGGGTAGAGTTGGGGAAGCAAATGCCCCTTAGATTTAGATTTTCAGTTGTGATCAGCCCAAAATGATTTGAGAAAAGAATTGGGTTGAGAAGTAAGTGGCTAAGATGTAGGGCTTTCAAAGATGAAAGCTTTTTGTAGAGAGAATTTCCGAAGTGTATGAAACCCATGAGAGACAAAAAATGAGACAAACAAAAACAAAGAGTGAAGGTGGAAAAAGCTTTGTTCATGTATAACATAAATTGGCCGAAGGCCCTTCAAAGAGTACAAAGAAGAGAAAAAAAAGCTCTCTTTCTTTTAAGCGTTAGAATTTCTATATGC ATGTTCTCAGCTATTTGCGATGAGCAATGTAGCCTCCATGGAGGTGTCTGTGATAATGGCGTTTGCGAGTTTCGTTGTTCGGATTATGCTGGCTATTCGTGCCAGAACAGCTCCAGGCTTCTTTCGAGTCTCTCTGTTTGTAAAAATGTACTGCAAAGGGATATGACTGGCCAACATTGTGCACCCAGTGAACTGAGTATACTACAGCAGCTCGAGGAAGTTGTTGTCATGCCGAATTACCACCGTTTGTTTCCCGGTGGTGCCCGGAAACTTTTTAACATCTTCGGTGGTAGCTACTGCGACGCAGCTGCAAAACAGTTGGCTTGCTGGATTTCGATACAAAAGTGTGACGAAGACGGCGACAACAGACTCCGAGTATGCCATTCGGCTTGTCAGTCATACAATCTAGCATGTGGGGCATCACTCGACTGCTCCGACCAGACCCTTTTCAACAGTGAGGAGGAAGGCGAAGGGCAGTGCACAGGGTCCGGTGAGATCAAACTGTCGTGGTTTAATCGACTACGCAGTAACTTATTCGTAAGTAACAGCTCGTCGAAAGGAAGGTCTGTAAAGTAA MFSAICDEQCSLHGGVCDNGVCEFRCSDYAGYSCQNSSRLLSSLSVCKNVLQRDMTGQHCAPSELSILQQLEEVVVMPNYHRLFPGGARKLFNIFGGSYCDAAAKQLACWISIQKCDEDGDNRLRVCHSACQSYNLACGASLDCSDQTLFNSEEEGEGQCTGSGEIKLSWFNRLRSNLFVSNSSSKGRSVK
BLAST of Carg11819 vs. NCBI nr
Match: XP_022961936.1 (leishmanolysin homolog [Cucurbita moschata]) HSP 1 Score: 349.7 bits (896), Expect = 6.1e-93 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg11819 vs. NCBI nr
Match: XP_023545765.1 (leishmanolysin homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 347.8 bits (891), Expect = 2.3e-92 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg11819 vs. NCBI nr
Match: XP_022996598.1 (leishmanolysin homolog [Cucurbita maxima]) HSP 1 Score: 345.5 bits (885), Expect = 1.1e-91 Identity = 165/168 (98.21%), Postives = 167/168 (99.40%), Query Frame = 0
BLAST of Carg11819 vs. NCBI nr
Match: XP_022144235.1 (leishmanolysin homolog isoform X1 [Momordica charantia]) HSP 1 Score: 338.6 bits (867), Expect = 1.4e-89 Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of Carg11819 vs. NCBI nr
Match: XP_022144236.1 (leishmanolysin homolog isoform X2 [Momordica charantia]) HSP 1 Score: 338.6 bits (867), Expect = 1.4e-89 Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0
BLAST of Carg11819 vs. TAIR10
Match: AT5G42620.2 (metalloendopeptidases;zinc ion binding) HSP 1 Score: 270.8 bits (691), Expect = 6.5e-73 Identity = 124/155 (80.00%), Postives = 142/155 (91.61%), Query Frame = 0
BLAST of Carg11819 vs. TrEMBL
Match: tr|A0A0A0LP85|A0A0A0LP85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361380 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 1.3e-88 Identity = 158/164 (96.34%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of Carg11819 vs. TrEMBL
Match: tr|A0A1S3BAE9|A0A1S3BAE9_CUCME (leishmanolysin homolog OS=Cucumis melo OX=3656 GN=LOC103487946 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 5.1e-88 Identity = 157/164 (95.73%), Postives = 163/164 (99.39%), Query Frame = 0
BLAST of Carg11819 vs. TrEMBL
Match: tr|A0A061FBK0|A0A061FBK0_THECC (Metalloendopeptidases,zinc ion binding isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_033985 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.2e-81 Identity = 149/168 (88.69%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of Carg11819 vs. TrEMBL
Match: tr|A0A061FCF0|A0A061FCF0_THECC (Metalloendopeptidases,zinc ion binding isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_033985 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.2e-81 Identity = 149/168 (88.69%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of Carg11819 vs. TrEMBL
Match: tr|A0A1R3IYK1|A0A1R3IYK1_COCAP (Peptidase M8, leishmanolysin OS=Corchorus capsularis OX=210143 GN=CCACVL1_08863 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 4.6e-81 Identity = 147/168 (87.50%), Postives = 160/168 (95.24%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |