Carg11774 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11774
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Thioredoxin
Location	Cucurbita_argyrosperma_scaffold_036 : 67774 .. 69351 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCTCTATTCATTGCTTCATTTTCAAATTCAGGGACGACTTCTGCAAGACCCCGATTTTTTGTTTGAACCAATGGCTGCAGAAGGACAAGTGATTGTGGTTCGTAAGGTTGACGAATTCGATGCGCTTGTTAAGCAAGGAATCGAGGCTGGTAAACTGGTATGATTTTTGTTTTTTCGTTCTCTCCATTTCTACTCTCGAATTGATTGACTTTCGTATGTGATTTCGATGGAATTTTGGATTTGGCGCGTAGGTATATCGAAGCATTTTTCATGTCTTCGCAATTGCTGCTGCATTATTATTGTTATTGTTCTAGATTGTTCGATGATCTGGGAAGATCCGTGATTGATTCGTTAGGGTTTCTGATATTTGCCTATGATTGTGCCTAGTTCTCAGTCTAATTTCTTCAATTTTGACTGTTTATTTCGATTGTAGTGTTGAAATTGCTAATAGGACTTTTGATCGATTATGGAATGTTTTGAGTTTATATCAGATTTCACAATTTTACTCTTCAATTATTCTCTGTTTCTCGCTTCGTGTCCTTTTTATTAGAAGTCTTTGAACTTGATGATTTCATTCTGGTTTGACAGTAGTTTTGTGGTTAATTTTTTGTTCCTGATGTTTCTAAAATTCTTTTTATTAGATTGTGGTGGATTTTACTGCTTCCTGGTGCCCGCCATGCCGTTTCATTGCTCCAGTATTCGCAGAGATGGCTAAGGCGCACGTCAATGTCGTTTTCCTGAAAGTGGACGTCGATGACTTAAAAGTACAGAAATCTAAGCTGTTGTTTGGGATAGTCAATGCAGTGGAATGGAACTGTTTCGTTTAGTTTATCTTTTCTTATCAAGCAATGGTTCCCATTTCTTTGCAGGAAATTGCTCAAAAGTTCGAGGTTACGGCAATGCCGACCTTTGTTTTCCTGAAAGGAGGGGCGGAAGTTCACAGAATTGTGGGTGCTGACAAAGTGGAGCTGGGGAAGAAAGTATTGGAATTAGGAGCACCAGCTGCCACTTCCTCTGCTTAGATGGTGAGCTTGATGGATTGTTCTGCTTCTTATTATTATGGTGTGATGATGAATTCTTGTTTCGAGTTTGTTCTGCTTGTGGATTTGATGGCATTGTGTCGGAGATGTTTACTTGTGTTCTTTGCATGTCCGTAAAAAAAAAAACATATGTACAATAAGATTCAGTATATCTATGATGATGTATCTGCCGAAGCTTTTATTTCTCTCCTCCTTTTTCTCTCAGCTTTGGAAAGTGTTCGTGTTGTTGAATTTCTCATATTTGTGCTTGGTTCTCCATGATGTGCTACGCTTTAGTCAGGTTGAATAAGAACTGAAACTTTGGAGGACTTAGGGGTCATTTGGGTGAGGAAATGGGTTGGAAGGAGGAAAAGAACAAACTGGGGTATGGGTCTGCCTCCTCTTGTTTGGAAGAAAGTAGTTTTTAAAGTGGAACAATGGAATAATTTATTCTTAGGCATCTTTTGTATCTATGACTATACATTATTGAGTATTCTCTCTTTTTCTCTCAACCATGTAATAGGTTAAGCTCATCGCTAATCGATATTGTCTGT

mRNA sequence

ATGCGTCTCTATTCATTGCTTCATTTTCAAATTCAGGGACGACTTCTGCAAGACCCCGATTTTTTGTTTGAACCAATGGCTGCAGAAGGACAAGTGATTGTGGTTCGTAAGGTTGACGAATTCGATGCGCTTGTTAAGCAAGGAATCGAGGCTGGTAAACTGATTGTGGTGGATTTTACTGCTTCCTGGTGCCCGCCATGCCGTTTCATTGCTCCAGTATTCGCAGAGATGGCTAAGGCGCACGTCAATGTCGTTTTCCTGAAAGTGGACGTCGATGACTTAAAAGAAATTGCTCAAAAGTTCGAGGTTACGGCAATGCCGACCTTTGTTTTCCTGAAAGGAGGGGCGGAAGTTCACAGAATTGTGGGTGCTGACAAAGTGGAGCTGGGGAAGAAAGTATTGGAATTAGGAGCACCAGCTGCCACTTCCTCTGCTTAGATGGTGAGCTTGATGGATTGTTCTGCTTCTTATTATTATGGTGTGATGATGAATTCTTGTTTCGAGTTTGTTCTGCTTGTGGATTTGATGGCATTGTGTCGGAGATGTTTACTTGTGTTCTTTGCATGTCCGTAAAAAAAAAAACATATGTACAATAAGATTCAGTATATCTATGATGATGTATCTGCCGAAGCTTTTATTTCTCTCCTCCTTTTTCTCTCAGCTTTGGAAAGTGTTCGTGTTGTTGAATTTCTCATATTTGTGCTTGGTTCTCCATGATGTGCTACGCTTTAGTCAGGTTGAATAAGAACTGAAACTTTGGAGGACTTAGGGGTCATTTGGGTGAGGAAATGGGTTGGAAGGAGGAAAAGAACAAACTGGGGTATGGGTCTGCCTCCTCTTGTTTGGAAGAAAGTAGTTTTTAAAGTGGAACAATGGAATAATTTATTCTTAGGCATCTTTTGTATCTATGACTATACATTATTGAGTATTCTCTCTTTTTCTCTCAACCATGTAATAGGTTAAGCTCATCGCTAATCGATATTGTCTGT

Coding sequence (CDS)

ATGCGTCTCTATTCATTGCTTCATTTTCAAATTCAGGGACGACTTCTGCAAGACCCCGATTTTTTGTTTGAACCAATGGCTGCAGAAGGACAAGTGATTGTGGTTCGTAAGGTTGACGAATTCGATGCGCTTGTTAAGCAAGGAATCGAGGCTGGTAAACTGATTGTGGTGGATTTTACTGCTTCCTGGTGCCCGCCATGCCGTTTCATTGCTCCAGTATTCGCAGAGATGGCTAAGGCGCACGTCAATGTCGTTTTCCTGAAAGTGGACGTCGATGACTTAAAAGAAATTGCTCAAAAGTTCGAGGTTACGGCAATGCCGACCTTTGTTTTCCTGAAAGGAGGGGCGGAAGTTCACAGAATTGTGGGTGCTGACAAAGTGGAGCTGGGGAAGAAAGTATTGGAATTAGGAGCACCAGCTGCCACTTCCTCTGCTTAG

Protein sequence

MRLYSLLHFQIQGRLLQDPDFLFEPMAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVVFLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA

Homology

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BLAST of Carg11774 vs. NCBI nr
Match: XP_022997319.1 (thioredoxin H5-like [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 9.4e-70
Identity = 139/145 (95.86%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MRLYSLLHFQIQGRLLQDPDFLFEPMAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFT 60
           MRLYS LHFQIQGRLLQD DFLFEPMAAEGQ IVVRKVDEFDALVKQG EAGKLIVVDFT
Sbjct: 1   MRLYSSLHFQIQGRLLQDTDFLFEPMAAEGQAIVVRKVDEFDALVKQGSEAGKLIVVDFT 60

Query: 61  ASWCPPCRFIAPVFAEMAKAHVNVVFLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHR 120
           ASWCPPCRFIAPVFAEMAKAH NVVFLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEV+R
Sbjct: 61  ASWCPPCRFIAPVFAEMAKAHSNVVFLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVYR 120

Query: 121 IVGADKVELGKKVLELGAPAATSSA 146
           IVGADKVELGKKVLELGAPAATSSA
Sbjct: 121 IVGADKVELGKKVLELGAPAATSSA 145

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BLAST of Carg11774 vs. NCBI nr
Match: XP_022962605.1 (thioredoxin H5-like [Cucurbita moschata])

HSP 1 Score: 234.2 bits (596), Expect = 2.8e-58
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MAAEGQVIVVRKV+EFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV
Sbjct: 1   MAAEGQVIVVRKVEEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 145
           FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA
Sbjct: 61  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 120

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BLAST of Carg11774 vs. NCBI nr
Match: XP_023545550.1 (thioredoxin H5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.5 bits (589), Expect = 1.8e-57
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MAAEGQVIVVRKV+EFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV
Sbjct: 1   MAAEGQVIVVRKVEEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 145
           FLKVDVD+LKEIAQKF+VTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA
Sbjct: 61  FLKVDVDELKEIAQKFDVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 120

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BLAST of Carg11774 vs. NCBI nr
Match: XP_023536799.1 (thioredoxin H1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190.7 bits (483), Expect = 3.6e-45
Identity = 95/120 (79.17%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MA EGQVI +R   EFD++V +  E+GKLIV+DFTASWCPPCRFIAPVFAE+AKAHVNV 
Sbjct: 1   MAVEGQVISLRDAKEFDSIVDKEKESGKLIVIDFTASWCPPCRFIAPVFAELAKAHVNVT 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 145
           FLKVDVD++KEIA+KFEVTAMPTFVFLKGG EVHRIVGADKVELG KVLEL A  ATS+A
Sbjct: 61  FLKVDVDNVKEIAEKFEVTAMPTFVFLKGGNEVHRIVGADKVELGVKVLELSAAPATSAA 120

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BLAST of Carg11774 vs. NCBI nr
Match: XP_022144127.1 (thioredoxin H-type 1-like [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-43
Identity = 92/122 (75.41%), Postives = 107/122 (87.70%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MA EGQVI V  V+ FD L+K+G E+GKLIVVDFTASWCPPCRFIAP+FAE+AKAH+ V+
Sbjct: 1   MAEEGQVIGVHNVEAFDDLLKKGTESGKLIVVDFTASWCPPCRFIAPIFAELAKAHIGVI 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEV--HRIVGADKVELGKKVLELGAPAATS 145
           FLKVDVD++KE+++KFEVTAMPTFVFLK GAEV   RIVGADKVELGK+VL L APAA +
Sbjct: 61  FLKVDVDEVKEVSEKFEVTAMPTFVFLKEGAEVKNSRIVGADKVELGKRVLALSAPAAAT 120

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BLAST of Carg11774 vs. TAIR10
Match: AT1G45145.1 (thioredoxin H-type 5)

HSP 1 Score: 137.9 bits (346), Expect = 5.0e-33
Identity = 66/118 (55.93%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MA EG+VI    ++ ++  VK   E+ KLIV+DFTASWCPPCRFIAPVFAEMAK   NVV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATS 144
           F K+DVD+L+ +AQ+F+V AMPTFVF+K G  + R+VGA K E+ +K+++ G   A++
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118

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BLAST of Carg11774 vs. TAIR10
Match: AT5G42980.1 (thioredoxin 3)

HSP 1 Score: 127.9 bits (320), Expect = 5.2e-30
Identity = 59/104 (56.73%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MAAEG+VI    V+++   +K   E+ KLIV+DFTA+WCPPCRFIAPVFA++AK H++VV
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVEL 130
           F KVDVD+L  +A++F+V AMPTF+F+K G     +VGA K E+
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEI 104

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BLAST of Carg11774 vs. TAIR10
Match: AT1G19730.1 (Thioredoxin superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 7.7e-26
Identity = 55/110 (50.00%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 27  AAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHV-NVV 86
           A EGQVI     D +   + +  E+ KLIV+DFTASWCPPCR IAP+F ++AK  + + +
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 87  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLE 136
           F KVDVD+L+ +A++F V AMPTFVF+K G  V ++VGA+K +L  K+++
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVK 112

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BLAST of Carg11774 vs. TAIR10
Match: AT3G51030.1 (thioredoxin H-type 1)

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-25
Identity = 54/101 (53.47%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 29  EGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVVFLK 88
           EGQVI    V+ ++  +++  E+  L+VVDFTASWC PCRFIAP FA++AK   NV+FLK
Sbjct: 5   EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64

Query: 89  VDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVEL 130
           VD D+LK +A  + + AMPTF+FLK G  + ++VGA K EL
Sbjct: 65  VDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDEL 105

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BLAST of Carg11774 vs. TAIR10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin)

HSP 1 Score: 104.0 bits (258), Expect = 8.0e-23
Identity = 42/107 (39.25%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 29  EGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVVFLK 88
           +G+VI +    E +A  K   +A +L+++ FTA+WC PCR+++P+++ +A  H  VVFLK
Sbjct: 269 DGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLK 328

Query: 89  VDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLE 136
           VD+D   ++A  + ++++PTF F++ G EV ++VGADK  L +K+ +
Sbjct: 329 VDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIAQ 375

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BLAST of Carg11774 vs. Swiss-Prot
Match: sp|Q0D840|TRXH1_ORYSJ (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-32
Identity = 69/120 (57.50%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 27  AAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVVF 86
           A EG VI     DEFDA + +  EAGK++++DFTASWC PCRFIAPVFAE AK     VF
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 87  LKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLE-LGAPAATSSA 146
           LKVDVD+LKE+A+K+ V AMPTF+F+K GAE  ++VGA K +L   +++ +GA AA++SA
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 122

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BLAST of Carg11774 vs. Swiss-Prot
Match: sp|A2YIW7|TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-32
Identity = 69/120 (57.50%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 27  AAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVVF 86
           A EG VI     DEFDA + +  EAGK++++DFTASWC PCRFIAPVFAE AK     VF
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 87  LKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLE-LGAPAATSSA 146
           LKVDVD+LKE+A+K+ V AMPTF+F+K GAE  ++VGA K +L   +++ +GA AA++SA
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAASASA 122

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BLAST of Carg11774 vs. Swiss-Prot
Match: sp|Q39241|TRXH5_ARATH (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.0e-32
Identity = 66/118 (55.93%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MA EG+VI    ++ ++  VK   E+ KLIV+DFTASWCPPCRFIAPVFAEMAK   NVV
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATS 144
           F K+DVD+L+ +AQ+F+V AMPTFVF+K G  + R+VGA K E+ +K+++ G   A++
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118

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BLAST of Carg11774 vs. Swiss-Prot
Match: sp|P29449|TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-30
Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 29  EGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVVFLK 88
           EGQV    KV+E++   K+G+E  KL+VVDFTASWC PCRFIAP+ A++AK   +V+FLK
Sbjct: 11  EGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLK 70

Query: 89  VDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSS 145
           VDVD+LK ++ ++ V AMPTFVF+K G EV R+VGA K EL + +++  APA  ++
Sbjct: 71  VDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPATVTA 126

[Close]

BLAST of Carg11774 vs. Swiss-Prot
Match: sp|Q42403|TRXH3_ARATH (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.3e-29
Identity = 59/104 (56.73%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MAAEG+VI    V+++   +K   E+ KLIV+DFTA+WCPPCRFIAPVFA++AK H++VV
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVEL 130
           F KVDVD+L  +A++F+V AMPTF+F+K G     +VGA K E+
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEI 104

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BLAST of Carg11774 vs. TrEMBL
Match: tr|Q8H9E2|Q8H9E2_CUCMA (Thioredoxin h OS=Cucurbita maxima OX=3661 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43
Identity = 90/120 (75.00%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MA EGQVI +R  +EFDA++ +  E+G+LIV+DFTASWCPPCRFIAPVFAE+AKAHV+V 
Sbjct: 1   MAVEGQVIPLRDAEEFDAIIDKEKESGRLIVIDFTASWCPPCRFIAPVFAELAKAHVHVT 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLELGAPAATSSA 145
           FLKVDVD++KEIA++FEVTAMPTFVFLKGG EVHRIVGADKVELG KVLEL A  AT ++
Sbjct: 61  FLKVDVDNVKEIAKRFEVTAMPTFVFLKGGNEVHRIVGADKVELGVKVLELSAAPATCAS 120

[Close]

BLAST of Carg11774 vs. TrEMBL
Match: tr|A0A1S3BBV0|A0A1S3BBV0_CUCME (thioredoxin H-type 1 OS=Cucumis melo OX=3656 GN=LOC103488008 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.9e-35
Identity = 80/121 (66.12%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           MA EGQVI +  V+EFDALV +G E GKLIVVDFTASWCPPCRFIAPVFAE+AK + +V+
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAE--VHRIVGADKVELGKKVLELGAPAATS 145
           FLKVDVD+++ IA +F+V AMPTF F+K G E  V RIVGADKV LG+ V EL  P  ++
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSVRRIVGADKVGLGRNVSELCGPVPST 120

[Close]

BLAST of Carg11774 vs. TrEMBL
Match: tr|A0A1E5VSV0|A0A1E5VSV0_9POAL (Thioredoxin H-type OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0010792 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 65/103 (63.11%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 27  AAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVVF 86
           A EG VI     +EFD  + +  EAGKL+V+DFTASWCPPCRFIAPVF E+AKAH +++F
Sbjct: 3   AEEGTVIACHTKEEFDTQMNKAKEAGKLVVIDFTASWCPPCRFIAPVFVELAKAHPHIIF 62

Query: 87  LKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVEL 130
           LKVDVD+LKE+++++E+TAMPTF F+K G +VH IVGADK  L
Sbjct: 63  LKVDVDELKEVSEQYEITAMPTFAFVKDGEKVHTIVGADKENL 105

[Close]

BLAST of Carg11774 vs. TrEMBL
Match: tr|A0A1S3BB48|A0A1S3BB48_CUCME (thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103488007 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 9.7e-31
Identity = 72/122 (59.02%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           M  EGQVI   K  E+DAL+ +  E+GKL+VVDFTASWC PCR IAP F+E+AK H  V+
Sbjct: 1   MGEEGQVIACHKQSEWDALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHPGVM 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLEL--GAPAATS 145
           FLKVDVD+L  IA ++++ AMPTFVF+KGG  +H+IVGAD+  L KK+ EL     AATS
Sbjct: 61  FLKVDVDELNAIASEWKINAMPTFVFVKGGETLHKIVGADRAALLKKIEELKTSTAAATS 120

[Close]

BLAST of Carg11774 vs. TrEMBL
Match: tr|A0A0A0LRK2|A0A0A0LRK2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G362490 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30
Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = 0


Query: 26  MAAEGQVIVVRKVDEFDALVKQGIEAGKLIVVDFTASWCPPCRFIAPVFAEMAKAHVNVV 85
           M  EGQVI   K  E++AL+ +  E+GKL+VVDFTASWC PCR IAP F+E+AK H  V+
Sbjct: 1   MGEEGQVIACHKQSEWEALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHSGVM 60

Query: 86  FLKVDVDDLKEIAQKFEVTAMPTFVFLKGGAEVHRIVGADKVELGKKVLEL---GAPAAT 145
           F+KVDVD+L  IA ++++TAMPTFVF+KGG  VH+IVGAD+  L KK+ EL      AAT
Sbjct: 61  FIKVDVDELNAIASEWKITAMPTFVFVKGGETVHKIVGADRAALLKKIEELKTSTTAAAT 120

The following BLAST results are available for this feature:

BLAST of Carg11774 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997319.1	9.4e-70	95.86	thioredoxin H5-like [Cucurbita maxima]	[more]
XP_022962605.1	2.8e-58	99.17	thioredoxin H5-like [Cucurbita moschata]	[more]
XP_023545550.1	1.8e-57	97.50	thioredoxin H5-like [Cucurbita pepo subsp. pepo]	[more]
XP_023536799.1	3.6e-45	79.17	thioredoxin H1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022144127.1	2.0e-43	75.41	thioredoxin H-type 1-like [Momordica charantia]	[more]

BLAST of Carg11774 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G45145.1	5.0e-33	55.93	thioredoxin H-type 5	[more]
AT5G42980.1	5.2e-30	56.73	thioredoxin 3	[more]
AT1G19730.1	7.7e-26	50.00	Thioredoxin superfamily protein	[more]
AT3G51030.1	3.8e-25	53.47	thioredoxin H-type 1	[more]
AT3G17880.1	8.0e-23	39.25	tetraticopeptide domain-containing thioredoxin	[more]

BLAST of Carg11774 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0D840\|TRXH1_ORYSJ	4.0e-32	57.50	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]
sp\|A2YIW7\|TRXH_ORYSI	4.0e-32	57.50	Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1	[more]
sp\|Q39241\|TRXH5_ARATH	9.0e-32	55.93	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]
sp\|P29449\|TRXH1_TOBAC	2.2e-30	54.31	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
sp\|Q42403\|TRXH3_ARATH	9.3e-29	56.73	Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1	[more]

BLAST of Carg11774 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|Q8H9E2\|Q8H9E2_CUCMA	1.3e-43	75.00	Thioredoxin h OS=Cucurbita maxima OX=3661 PE=2 SV=1	[more]
tr\|A0A1S3BBV0\|A0A1S3BBV0_CUCME	2.9e-35	66.12	thioredoxin H-type 1 OS=Cucumis melo OX=3656 GN=LOC103488008 PE=4 SV=1	[more]
tr\|A0A1E5VSV0\|A0A1E5VSV0_9POAL	1.1e-31	63.11	Thioredoxin H-type OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0010792 PE=4...	[more]
tr\|A0A1S3BB48\|A0A1S3BB48_CUCME	9.7e-31	59.02	thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103488007 PE=4 SV=1	[more]
tr\|A0A0A0LRK2\|A0A0A0LRK2_CUCSA	1.3e-30	58.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G362490 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis
GO:0006662	glycerol ether metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR017937	Thioredoxin_CS
IPR013766	Thioredoxin_domain
IPR005746	Thioredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11774-RA	Carg11774-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 102..113 score: 37.04 coord: 55..63 score: 53.21 coord: 63..72 score: 58.56
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 24..138 e-value: 1.3E-36 score: 127.1
None	No IPR available	PANTHER	PTHR10438:SF293	SUBFAMILY NOT NAMED	coord: 26..134
None	No IPR available	CDD	cd02947	TRX_family	coord: 39..128 e-value: 2.79435E-35 score: 118.43
IPR005746	Thioredoxin	PIRSF	PIRSF000077	Thioredoxin	coord: 31..136 e-value: 3.3E-26 score: 89.3
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 26..134
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 34..131 e-value: 8.0E-27 score: 93.1
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 12..138 score: 14.037
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 56..74
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 12..128

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11774	Cla022460	Watermelon (97103) v1	carwmB0172
Carg11774	Csa2G362490	Cucumber (Chinese Long) v2	carcuB0202
Carg11774	MELO3C010975	Melon (DHL92) v3.5.1	carmeB0186
Carg11774	ClCG08G014670	Watermelon (Charleston Gray)	carwcgB0178
Carg11774	CSPI02G20430	Wild cucumber (PI 183967)	carcpiB0209
Carg11774	Cucsa.231840	Cucumber (Gy14) v1	carcgyB0222
Carg11774	CmaCh05G002720	Cucurbita maxima (Rimu)	carcmaB0256
Carg11774	CmaCh12G004390	Cucurbita maxima (Rimu)	carcmaB0249
Carg11774	CmoCh05G002770	Cucurbita moschata (Rifu)	carcmoB0263
Carg11774	CmoCh12G003900	Cucurbita moschata (Rifu)	carcmoB0257
Carg11774	Lsi08G013600	Bottle gourd (USVL1VR-Ls)	carlsiB164
Carg11774	Cp4.1LG11g02330	Cucurbita pepo (Zucchini)	carcpeB0263
Carg11774	Cp4.1LG07g03990	Cucurbita pepo (Zucchini)	carcpeB0268
Carg11774	CsGy2G020170	Cucumber (Gy14) v2	carcgybB0195
Carg11774	MELO3C010975.2	Melon (DHL92) v3.6.1	carmedB0190
Carg11774	CsaV3_2G029110	Cucumber (Chinese Long) v3	carcucB0209
Carg11774	Cla97C05G100020	Watermelon (97103) v2	carwmbB0188
Carg11774	Cla97C08G158200	Watermelon (97103) v2	carwmbB0190
Carg11774	Bhi04G000187	Wax gourd	carwgoB0232

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11774	Carg17167	Silver-seed gourd	carcarB226
Carg11774	Carg04023	Silver-seed gourd	carcarB227

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11774	Silver-seed gourd	carcarB119
Carg11774	Cucumber (Gy14) v2	carcgybB0196
Carg11774	Cucumber (Gy14) v1	carcgyB0223
Carg11774	Cucurbita maxima (Rimu)	carcmaB0247
Carg11774	Cucurbita maxima (Rimu)	carcmaB0252
Carg11774	Cucurbita moschata (Rifu)	carcmoB0255
Carg11774	Cucurbita moschata (Rifu)	carcmoB0260
Carg11774	Cucurbita pepo (Zucchini)	carcpeB0265
Carg11774	Cucurbita pepo (Zucchini)	carcpeB0267
Carg11774	Wild cucumber (PI 183967)	carcpiB0210
Carg11774	Cucumber (Chinese Long) v2	carcuB0203
Carg11774	Cucumber (Chinese Long) v3	carcucB0210
Carg11774	Bottle gourd (USVL1VR-Ls)	carlsiB163
Carg11774	Watermelon (Charleston Gray)	carwcgB0176
Carg11774	Watermelon (97103) v1	carwmB0174