Carg11771 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGTATCAACCAGTGTAAATCAACTCATTGTGGGCTATATTCCTCCGTGCGGGTGACTTATACCCTCCGTTTTTCAGAGATACTAATACCATTGGTTTAATAAAGGTTCGTGACGCGTATCCATTTGGTGTGGATCCGAAGTGGCAGGGCACTCGAAGTGAGTTACCTTTTCTCAAATCTTTGAAGATGACGATGTCTATCCTACTGGAGTAGCTCAAATGAACAGAGGAATTATATTGAGCTACTTCAAAGCAAAATTCTTTGGAGAAAACATTAACATCTGGTTAGTTGCTTTAAGATGGATCCATTGTATCATCATTAAAATCATTTCTTTATTGAATTGTTAATTAATTGGCAGTCTTTCCGTAGAATTAATTGTTTGAAAATTTTCCTCCGGATGGCGGATTCTTGAATGAGATGTAATGTAGTCAATTATATGCAGTTGATGAATAAACTTTTAAAAAAAATATTGTTTTTATAAATTATTCAATTAGGCCTCTTCAAACCACATCCTAAAATTCTAGTGAAGATTCTGTTTTCTTTATTCTAACAAGTGTAAATTTTGTTTCATTGTTTCAGGTACCAATTTGTTCTACAGATGATTTTCATGAACAGTTTATGCGGTTACCTCTCACTTCTCATAATTGTAACGTGGTGCTCTGGATCTCAAGCTCTGTATCACGTAATGATCTATATAGGCGAAAACCAGCTTTTTCCAGGACAGTTCCTTCAGGTTCTTCATGCTTTGATGTGCTTCAAATTTCTTTTCATAATACTTGATTAGAATCAACTATTAATAACTATGTTTTTACACTTCCAGCATCCGTTAATTCTGTCTGCCCTCACTACCTTCTCTGTTGAAGAAACAACATGA ATGCAGGTATCAACCAGTGTAAATCAACTCATTGTGGGCTATATTCCTCCGTGCGGAGATACTAATACCATTGGTTTAATAAAGGTTCGTGACGCGTATCCATTTGGTGTGGATCCGAAGTGGCAGGGCACTCGAAATGACGATGTCTATCCTACTGGAGTAGCTCAAATGAACAGAGGAATTATATTGAGCTACTTCAAAGCAAAATTCTTTGGAGAAAACATTAACATCTGTCTTTCCGTAGAATTAATTGTACCAATTTGTTCTACAGATGATTTTCATGAACAGTTTATGCGGTTACCTCTCACTTCTCATAATTGTAACGTGGTGCTCTGGATCTCAAGCTCTGTATCACGTAATGATCTATATAGGCGAAAACCAGCTTTTTCCAGGACAGTTCCTTCAGGTTCTTCATGCTTTGATAATCAACTATTAATAACTATGTTTTTACACTTCCAGCATCCGTTAATTCTGTCTGCCCTCACTACCTTCTCTGTTGAAGAAACAACATGA ATGCAGGTATCAACCAGTGTAAATCAACTCATTGTGGGCTATATTCCTCCGTGCGGAGATACTAATACCATTGGTTTAATAAAGGTTCGTGACGCGTATCCATTTGGTGTGGATCCGAAGTGGCAGGGCACTCGAAATGACGATGTCTATCCTACTGGAGTAGCTCAAATGAACAGAGGAATTATATTGAGCTACTTCAAAGCAAAATTCTTTGGAGAAAACATTAACATCTGTCTTTCCGTAGAATTAATTGTACCAATTTGTTCTACAGATGATTTTCATGAACAGTTTATGCGGTTACCTCTCACTTCTCATAATTGTAACGTGGTGCTCTGGATCTCAAGCTCTGTATCACGTAATGATCTATATAGGCGAAAACCAGCTTTTTCCAGGACAGTTCCTTCAGGTTCTTCATGCTTTGATAATCAACTATTAATAACTATGTTTTTACACTTCCAGCATCCGTTAATTCTGTCTGCCCTCACTACCTTCTCTGTTGAAGAAACAACATGA MQVSTSVNQLIVGYIPPCGDTNTIGLIKVRDAYPFGVDPKWQGTRNDDVYPTGVAQMNRGIILSYFKAKFFGENINICLSVELIVPICSTDDFHEQFMRLPLTSHNCNVVLWISSSVSRNDLYRRKPAFSRTVPSGSSCFDNQLLITMFLHFQHPLILSALTTFSVEETT
BLAST of Carg11771 vs. NCBI nr
Match: XP_007158764.1 (hypothetical protein PHAVU_002G179900g [Phaseolus vulgaris] >ESW30758.1 hypothetical protein PHAVU_002G179900g [Phaseolus vulgaris]) HSP 1 Score: 91.7 bits (226), Expect = 2.7e-15 Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Carg11771 vs. NCBI nr
Match: PNX90772.1 (vacuolar proton ATPase a3-like protein, partial [Trifolium pratense]) HSP 1 Score: 90.9 bits (224), Expect = 4.5e-15 Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Carg11771 vs. NCBI nr
Match: KZM89605.1 (hypothetical protein DCAR_023032 [Daucus carota subsp. sativus]) HSP 1 Score: 90.5 bits (223), Expect = 5.9e-15 Identity = 43/72 (59.72%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of Carg11771 vs. NCBI nr
Match: XP_017258199.1 (PREDICTED: LOW QUALITY PROTEIN: V-type proton ATPase subunit a3 [Daucus carota subsp. sativus]) HSP 1 Score: 90.5 bits (223), Expect = 5.9e-15 Identity = 43/72 (59.72%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of Carg11771 vs. NCBI nr
Match: XP_004152666.1 (PREDICTED: V-type proton ATPase subunit a2 [Cucumis sativus] >KGN62648.1 hypothetical protein Csa_2G364570 [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 7.7e-15 Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of Carg11771 vs. TAIR10
Match: AT2G28520.1 (vacuolar proton ATPase A1) HSP 1 Score: 78.6 bits (192), Expect = 4.2e-15 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Carg11771 vs. TAIR10
Match: AT2G21410.1 (vacuolar proton ATPase A2) HSP 1 Score: 77.8 bits (190), Expect = 7.2e-15 Identity = 37/70 (52.86%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Carg11771 vs. TAIR10
Match: AT4G39080.1 (vacuolar proton ATPase A3) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-14 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Carg11771 vs. Swiss-Prot
Match: sp|Q8RWZ7|VHAA1_ARATH (V-type proton ATPase subunit a1 OS=Arabidopsis thaliana OX=3702 GN=VHA-a1 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 7.6e-14 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Carg11771 vs. Swiss-Prot
Match: sp|Q9SJT7|VHAA2_ARATH (V-type proton ATPase subunit a2 OS=Arabidopsis thaliana OX=3702 GN=VHA-a2 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13 Identity = 37/70 (52.86%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Carg11771 vs. Swiss-Prot
Match: sp|Q8W4S4|VHAA3_ARATH (V-type proton ATPase subunit a3 OS=Arabidopsis thaliana OX=3702 GN=VHA-a3 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-13 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Carg11771 vs. TrEMBL
Match: tr|V7CN33|V7CN33_PHAVU (V-type proton ATPase subunit a OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G179900g PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15 Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Carg11771 vs. TrEMBL
Match: tr|A0A2K3MJ11|A0A2K3MJ11_TRIPR (V-type proton ATPase subunit a (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g046898 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.0e-15 Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Carg11771 vs. TrEMBL
Match: tr|A0A164UZN6|A0A164UZN6_DAUCA (V-type proton ATPase subunit a OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_023032 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.9e-15 Identity = 43/72 (59.72%), Postives = 49/72 (68.06%), Query Frame = 0
BLAST of Carg11771 vs. TrEMBL
Match: tr|A0A0A0LLK1|A0A0A0LLK1_CUCSA (V-type proton ATPase subunit a OS=Cucumis sativus OX=3659 GN=Csa_2G364570 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.1e-15 Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of Carg11771 vs. TrEMBL
Match: tr|A0A1S3BD13|A0A1S3BD13_CUCME (V-type proton ATPase subunit a OS=Cucumis melo OX=3656 GN=LOC103488550 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 6.7e-15 Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |