Carg11768 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11768
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein SHI RELATED SEQUENCE 1-like
Location	Cucurbita_argyrosperma_scaffold_036 : 19580 .. 20898 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGTTCTTCTATCTAGGAGGAGGGAGAGAAGGCCCACCAAACAAACAAGAAGAAGAAGAAGAAAGAGAACAAAACTTGTTTATGTATAGAAATGAAGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAACAATACACCAATCATCACCAGAATCCTTCTCTTACAGACCATTTATCCTTCGGCGTTGGTCCCAGCCGTCGCAGCTTCATGATCAACGACTCCGATGAGCCATCCAGATCAGCCTTCACCGTCATGCGCCCTGCCGCTGCCTTTGCCGCATCTGCTGCCGCTGCCGCTGGTGGAGGCATGAATTGTCAAGACTGTGGCAACCAAGCTAAGAAGGACTGCGCTTATTTGCGGTGTAGGACTTGCTGTAAGAGCCGCGGCTTTCAGTGTCAGACCCATGTCAAAAGCACTTGGGTTCCGGCTGCTAAACGCCGTGAGCGGCAGCAGCAAATTGCTGCTTTACAACAACAACAGCAACAAGAGCAGTTTCGTGGCGGAGAGAATTCTAAACGACAGAGAGAAACTCAGATTACCACCGCTGTCTCCGCCGCCACCGCCTCCGCCACCGCTTGCCCTCGTTTGCCCTCCATCACGTCAGGTAATCACGAATTTCGAGAGGATTTTTTACCTCTTTTGCAAATTTCCCCAGAAATTCATGGATTTCGTTTTTATTAATATCATTTGCGTGTAAGAAAATCTCGATCATCAATCACTTTTTTTTTTTTTTTTTTAATTTATAAATTTCAAATTCATCCACTGTTGATAAGTAAAACTGACGAAAAAGTTGTAAGAAATTAGTTAGAGTTTCGAAAACTTTATTTTCTGACAGATTAATTACACTGTTTGTTGGAATTTTTTAATTTTTTTTTAATAATTTTTTTGTGGGGTTTGGTATGATGATGATATTAGGGTTAGAACTGGCGCAATTTCCATCAGAAGTGAACTCACCGGCGGTATTTCGGTGCGTAAAAGTAAGCGCAATGGACGATGCAGATGAAGAGTTTGCATATCAGACGGCTGTGAACATCGGTGGTCATGTGTTCAAAGGAATTCTCTACGATCAAGGTCCTGAAGTCCGTTACACCGCAGCCGGTGAAAGCTCCTCCGGCCACGGCGGAGATGGATCAACACACCCACTTAACCTAATTGCCGGATCCTCCAACGCTGGACCCACTTCCGCATCTACCTCCGCCGCAACTAGTACCAACCCCTCCGCCGCCCCGTTGCTCGACCCTACGATATATCCAGCTCCTCTCAATGCATTCATGGCTGGTACGCAGTTCTTCCCACCCTCAAGGTCATGA

mRNA sequence

ATGGCTGGGTTCTTCTATCTAGGAGGAGGGAGAGAAGGCCCACCAAACAAACAAGAAGAAGAAGAAGAAAGAGAACAAAACTTGTTTATGTATAGAAATGAAGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAACAATACACCAATCATCACCAGAATCCTTCTCTTACAGACCATTTATCCTTCGGCGTTGGTCCCAGCCGTCGCAGCTTCATGATCAACGACTCCGATGAGCCATCCAGATCAGCCTTCACCGTCATGCGCCCTGCCGCTGCCTTTGCCGCATCTGCTGCCGCTGCCGCTGGTGGAGGCATGAATTGTCAAGACTGTGGCAACCAAGCTAAGAAGGACTGCGCTTATTTGCGGTGTAGGACTTGCTGTAAGAGCCGCGGCTTTCAGTGTCAGACCCATGTCAAAAGCACTTGGGTTCCGGCTGCTAAACGCCGTGAGCGGCAGCAGCAAATTGCTGCTTTACAACAACAACAGCAACAAGAGCAGTTTCGTGGCGGAGAGAATTCTAAACGACAGAGAGAAACTCAGATTACCACCGCTGTCTCCGCCGCCACCGCCTCCGCCACCGCTTGCCCTCGTTTGCCCTCCATCACGTCAGGGTTAGAACTGGCGCAATTTCCATCAGAAGTGAACTCACCGGCGGTATTTCGGTGCGTAAAAGTAAGCGCAATGGACGATGCAGATGAAGAGTTTGCATATCAGACGGCTGTGAACATCGGTGGTCATGTGTTCAAAGGAATTCTCTACGATCAAGGTCCTGAAGTCCGTTACACCGCAGCCGGTGAAAGCTCCTCCGGCCACGGCGGAGATGGATCAACACACCCACTTAACCTAATTGCCGGATCCTCCAACGCTGGACCCACTTCCGCATCTACCTCCGCCGCAACTAGTACCAACCCCTCCGCCGCCCCGTTGCTCGACCCTACGATATATCCAGCTCCTCTCAATGCATTCATGGCTGGTACGCAGTTCTTCCCACCCTCAAGGTCATGA

Coding sequence (CDS)

ATGGCTGGGTTCTTCTATCTAGGAGGAGGGAGAGAAGGCCCACCAAACAAACAAGAAGAAGAAGAAGAAAGAGAACAAAACTTGTTTATGTATAGAAATGAAGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAACAATACACCAATCATCACCAGAATCCTTCTCTTACAGACCATTTATCCTTCGGCGTTGGTCCCAGCCGTCGCAGCTTCATGATCAACGACTCCGATGAGCCATCCAGATCAGCCTTCACCGTCATGCGCCCTGCCGCTGCCTTTGCCGCATCTGCTGCCGCTGCCGCTGGTGGAGGCATGAATTGTCAAGACTGTGGCAACCAAGCTAAGAAGGACTGCGCTTATTTGCGGTGTAGGACTTGCTGTAAGAGCCGCGGCTTTCAGTGTCAGACCCATGTCAAAAGCACTTGGGTTCCGGCTGCTAAACGCCGTGAGCGGCAGCAGCAAATTGCTGCTTTACAACAACAACAGCAACAAGAGCAGTTTCGTGGCGGAGAGAATTCTAAACGACAGAGAGAAACTCAGATTACCACCGCTGTCTCCGCCGCCACCGCCTCCGCCACCGCTTGCCCTCGTTTGCCCTCCATCACGTCAGGGTTAGAACTGGCGCAATTTCCATCAGAAGTGAACTCACCGGCGGTATTTCGGTGCGTAAAAGTAAGCGCAATGGACGATGCAGATGAAGAGTTTGCATATCAGACGGCTGTGAACATCGGTGGTCATGTGTTCAAAGGAATTCTCTACGATCAAGGTCCTGAAGTCCGTTACACCGCAGCCGGTGAAAGCTCCTCCGGCCACGGCGGAGATGGATCAACACACCCACTTAACCTAATTGCCGGATCCTCCAACGCTGGACCCACTTCCGCATCTACCTCCGCCGCAACTAGTACCAACCCCTCCGCCGCCCCGTTGCTCGACCCTACGATATATCCAGCTCCTCTCAATGCATTCATGGCTGGTACGCAGTTCTTCCCACCCTCAAGGTCATGA

Protein sequence

MAGFFYLGGGREGPPNKQEEEEEREQNLFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTVMRPAAAFAASAAAAAGGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQQQQQQEQFRGGENSKRQRETQITTAVSAATASATACPRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTHPLNLIAGSSNAGPTSASTSAATSTNPSAAPLLDPTIYPAPLNAFMAGTQFFPPSRS

Homology

[Close]

BLAST of Carg11768 vs. NCBI nr
Match: XP_022996783.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116
Identity = 295/310 (95.16%), Postives = 295/310 (95.16%), Query Frame = 0


Query: 28  LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTV 87
           LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTV
Sbjct: 28  LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTV 87

Query: 88  MRPA-XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPA 147
           MRPA XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPA
Sbjct: 88  MRPAXXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPA 147

Query: 148 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGL 207
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATACPRLPSITSGL
Sbjct: 148 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATACPRLPSITSGL 207

Query: 208 ELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAG 267
           ELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAG
Sbjct: 208 ELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAG 267

Query: 268 ESSSGHGGDGSTHPLNLIAGSSNAGPTS-XXXXXXXXXXXXXXXXXXXXXXXAPLNAFMA 327
           ESSSGHGGDGSTHPLNLIAGSSNAGPTS XXXXXXXXXXX            APLNAFMA
Sbjct: 268 ESSSGHGGDGSTHPLNLIAGSSNAGPTSAXXXXXXXXXXXAAAPLLDPTIYPAPLNAFMA 327

Query: 328 GTQFFPPSRS 336
           GTQFFPPSRS
Sbjct: 328 GTQFFPPSRS 337

[Close]

BLAST of Carg11768 vs. NCBI nr
Match: XP_023546679.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421.8 bits (1083), Expect = 2.2e-114
Identity = 305/311 (98.07%), Postives = 305/311 (98.07%), Query Frame = 0


Query: 28  LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTV 87
           LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTV
Sbjct: 28  LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTV 87

Query: 88  MRPA-XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPA 147
           MRPA XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPA
Sbjct: 88  MRPAXXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPA 147

Query: 148 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGL 207
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGL
Sbjct: 148 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGL 207

Query: 208 ELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAG 267
           ELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAG
Sbjct: 208 ELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAG 267

Query: 268 ESSSGHGGDGSTHPLNLIAGSSNAGPTS--XXXXXXXXXXXXXXXXXXXXXXXAPLNAFM 327
           ESSSG GGDGSTHPLNLIAGSSNAGPTS  XXXXXXXXXXXXXXXXXXXXXXX  LNAFM
Sbjct: 268 ESSSGLGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXLNAFM 327

Query: 328 AGTQFFPPSRS 336
           AGTQFFPPSRS
Sbjct: 328 AGTQFFPPSRS 338

[Close]

BLAST of Carg11768 vs. NCBI nr
Match: XP_022962177.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata])

HSP 1 Score: 412.1 bits (1058), Expect = 1.7e-111
Identity = 298/310 (96.13%), Postives = 298/310 (96.13%), Query Frame = 0


Query: 28  LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTV 87
           LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTV
Sbjct: 28  LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTV 87

Query: 88  MRPAXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAX 147
           MRPAXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAX
Sbjct: 88  MRPAXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAX 147

Query: 148 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGLE 207
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGLE
Sbjct: 148 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGLE 207

Query: 208 LAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGE 267
           LAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGE
Sbjct: 208 LAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGE 267

Query: 268 SSSGHGGDGSTHPLNLIAG--SSNAGPTSXXXXXXXXXXXXXXXXXXXXXXXAPLNAFMA 327
           SSSGHGGDGSTHPLNLIAG          XXXXXXXXXXXXXXXXXXXXXXX  LNAFMA
Sbjct: 268 SSSGHGGDGSTHPLNLIAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNAFMA 327

Query: 328 GTQFFPPSRS 336
           GTQFFPPSRS
Sbjct: 328 GTQFFPPSRS 337

[Close]

BLAST of Carg11768 vs. NCBI nr
Match: XP_004152766.1 (PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis sativus] >KGN62649.1 hypothetical protein Csa_2G364580 [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 2.7e-96
Identity = 272/319 (85.27%), Postives = 279/319 (87.46%), Query Frame = 0


Query: 28  LFMYRN-EEIYNKGFEIWPQQYT------NHHQNPSLTDHLSFGVGPSRRSFMIND-SDE 87
           LF+YRN +EIYNKGFEIWPQQY             SL +HLSFGVGPSRRSFMIND SDE
Sbjct: 29  LFLYRNDQEIYNKGFEIWPQQYNXXXXXXXXXXXXSLPNHLSFGVGPSRRSFMINDPSDE 88

Query: 88  PSRSAFTVMRPA--XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 147
           PSRSAFT+MRPA  XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT
Sbjct: 89  PSRSAFTLMRPAAXXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 148

Query: 148 HVKSTWVP-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATAC 207
           HVKSTWVP A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    C
Sbjct: 149 HVKSTWVPAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC 208

Query: 208 PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 267
           PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ
Sbjct: 209 PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 268

Query: 268 GPEVRYTAAGESSSGHGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXX 327
           GPE+RYTAAGESSSGHGGDGSTHPLNLIAG ++     XXXXXXXXXXXXX         
Sbjct: 269 GPELRYTAAGESSSGHGGDGSTHPLNLIAGPTSXXXXXXXXXXXXXXXXXXAPLLDPSIY 328

Query: 328 XAPLNAFMAGTQFFPPSRS 336
            APLNAFMAGTQFFPPSRS
Sbjct: 329 PAPLNAFMAGTQFFPPSRS 347

[Close]

BLAST of Carg11768 vs. NCBI nr
Match: XP_008444770.1 (PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis melo])

HSP 1 Score: 361.3 bits (926), Expect = 3.5e-96
Identity = 274/319 (85.89%), Postives = 280/319 (87.77%), Query Frame = 0


Query: 28  LFMYRN-EEIYNKGFEIWPQQYT------NHHQNPSLTDHLSFGVGPSRRSFMIND-SDE 87
           LF+YRN +EIYNKGFEIWPQQY             SL +HLSFGVGPSRRSFMIND SDE
Sbjct: 29  LFLYRNDQEIYNKGFEIWPQQYNXXXXXXXXXXXXSLPNHLSFGVGPSRRSFMINDPSDE 88

Query: 88  PSRSAFTVMRPA--XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 147
           PSRSAFT+MRPA  XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT
Sbjct: 89  PSRSAFTLMRPAAXXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 148

Query: 148 HVKSTWVPA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATAC 207
           HVKSTWVPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AC
Sbjct: 149 HVKSTWVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAC 208

Query: 208 PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 267
           PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ
Sbjct: 209 PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 268

Query: 268 GPEVRYTAAGESSSGHGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXX 327
           GPE+RYTAAGESSSGHGGDGSTHPLNLI G +      XXXXXXXXXXXXXX        
Sbjct: 269 GPELRYTAAGESSSGHGGDGSTHPLNLITGPTXXXXXXXXXXXXXXXXXXXXPLLDPSIY 328

Query: 328 XAPLNAFMAGTQFFPPSRS 336
            APLNAFMAGTQFFPPSRS
Sbjct: 329 PAPLNAFMAGTQFFPPSRS 347

[Close]

BLAST of Carg11768 vs. TAIR10
Match: AT1G19790.1 (SHI-related sequence 7)

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-45
Identity = 146/319 (45.77%), Postives = 179/319 (56.11%), Query Frame = 0


Query: 28  LFMYRNEEIY--NKGFEIWPQQYTNHHQNPSL----TDHLSFGVGPSRRSFMINDSDEPS 87
           L++Y+ +EIY  NKGFEI+P                T+  SFG+ PS  +  IN++   +
Sbjct: 32  LYLYK-DEIYNNNKGFEIFPXXXXXXXXXXXXXXXPTNLYSFGMVPSGGN--INNNRSTN 91

Query: 88  RSA-FTVM---RPAXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 147
           RS  F V+    P               MNCQDCGNQAKKDC ++RCRTCCKSRGF CQT
Sbjct: 92  RSLYFNVVSDHEPVRSSTGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQT 151

Query: 148 HVKSTWVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACP 207
           HVKSTWV A                        XXXXXXXXXXXXXXXXXXXXX    C 
Sbjct: 152 HVKSTWVSAAKRRERQAQLAVLPAKRIRDANSRXXXXXXXXXXXXXXXXXXXXXXXXXCT 211

Query: 208 RLPSI-TSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 267
           R+ +  +SGLE +  P E++SPAVFRC++VS++DD DEE+AYQTAV+IGGHVFKGILYDQ
Sbjct: 212 RVVNASSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQ 271

Query: 268 GPEVRYTAAGESSSGHGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXX 327
           GP   +     SSS +G     H LNL+  + +A  T+                      
Sbjct: 272 GPSSDHHR--YSSSLNGETSHQHHLNLMDSTPSAA-TTNAVTAVNTNNGSIDPSSLYTAV 331

Query: 328 XAPLNAFMA-GTQFFPPSR 335
             P NAF+A GT FF  SR
Sbjct: 332 ATPFNAFVAGGTPFFASSR 344

[Close]

BLAST of Carg11768 vs. TAIR10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related)

HSP 1 Score: 169.5 bits (428), Expect = 3.6e-42
Identity = 112/282 (39.72%), Postives = 137/282 (48.58%), Query Frame = 0


Query: 58  TDHLSFGVGPSRRSFMINDSDEPSRSAFTVMRPAXXXXXXXXXXXXXXMNCQDCGNQAKK 117
           T     GVGPS RS +     E S  A  +MR                 +CQDCGNQ+KK
Sbjct: 84  TSAAGLGVGPSNRSLI-----ETSGGALMMMRSGSGSGGP---------SCQDCGNQSKK 143

Query: 118 DCAYLRCRTCCKSRGFQCQTHVKSTWVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
             +++RCRTCCKSRG  C THVKSTWVPA                               
Sbjct: 144 XXSHMRCRTCCKSRGLDCPTHVKSTWVPA----------AKRRERQQQLSTGQQPQQLGG 203

Query: 178 XXXXXXXXXXXXXXSATACPRLPS-ITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEF 237
                         ++ A  R+PS  TSGLE+  FP EV+S AVFRCV+VS++DD +EE+
Sbjct: 204 SVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEEY 263

Query: 238 AYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTHPLNLIA---GSSNAGPT 297
           AY+TAV+IGGHVFKG+LYDQGP      A  SSSG    G + PLNLI     +S++ P 
Sbjct: 264 AYKTAVSIGGHVFKGVLYDQGP------AERSSSG----GGSQPLNLITAGPSASSSSPN 323

Query: 298 SXXXXXXXXXXXXXXXXXXXXXXXAPLNAFMAGTQFFPPSRS 336
                                    P+N FM GT FF  SRS
Sbjct: 324 VSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTHFFSNSRS 331

[Close]

BLAST of Carg11768 vs. TAIR10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related)

HSP 1 Score: 156.8 bits (395), Expect = 2.4e-38
Identity = 78/153 (50.98%), Postives = 97/153 (63.40%), Query Frame = 0


Query: 106 MNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAXXXXXXXXXXXXXXXXXXX 165
           ++CQDCGNQAKKDC+++RCRTCCKSRGF+C THV+STWVPA                   
Sbjct: 142 VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPA--------AKRRERQQQLA 201

Query: 166 XXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGLELAQFPSEVNSPAVFRCVK 225
                                     S+  C R+PS  SGLE+  FP+EV+S AVFRCV+
Sbjct: 202 TVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPS-HSGLEVGNFPAEVSSSAVFRCVR 261

Query: 226 VSAMDDADEEFAYQTAVNIGGHVFKGILYDQGP 259
           VS+++D +EEFAYQTAV+IGGH+FKGILYD GP
Sbjct: 262 VSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGP 285

[Close]

BLAST of Carg11768 vs. TAIR10
Match: AT1G75520.1 (SHI-related sequence 5)

HSP 1 Score: 154.1 bits (388), Expect = 1.6e-37
Identity = 133/239 (55.65%), Postives = 152/239 (63.60%), Query Frame = 0


Query: 106 MNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAXXXXXXXXXXXXXXXXXXX 165
           MNCQDCGNQAKKDC ++RCRTCCKSRGF CQTHVKSTWVPA                   
Sbjct: 123 MNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHSAS 182

Query: 166 XXXXXXXXXXXXXXXXXXXXXXXXXXS-----ATACPRLPSITSGLELAQ-FPSEVNSPA 225
             XXXXXXXXXXXXXXXXXXXXXXXX      A       +  SGLE++Q  P EVNSPA
Sbjct: 183 SRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANTRVVNANSNSGLEVSQHLPPEVNSPA 242

Query: 226 VFRCVKVSAM--DDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGS 285
           +FRCV+VS++  D+ D+ +AYQTAVNIGGH+FKGILYDQGPE +                
Sbjct: 243 IFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQ---------------D 302

Query: 286 THPLNLIAGSS-NAGPTSXXXXXXXXXXXXXXXXXXXXXXXAPLNAFMAGTQFFPPSRS 336
            H LNL+A ++       XXXXXXXXXXXX           A LN+F+AGT FF P RS
Sbjct: 303 NHHLNLLASTAXXXXXXXXXXXXXXXXXXXGLMLDPSSLYPAQLNSFIAGTPFFTPPRS 346

[Close]

BLAST of Carg11768 vs. TAIR10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related)

HSP 1 Score: 148.7 bits (374), Expect = 6.5e-36
Identity = 106/160 (66.25%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 106 MNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAXXXXXXXXXXXXXXXXXXX 165
           ++C+DCGNQAKKDC ++RCRTCCKSRGF C THV+STW+P   XXXXXXXXXXXXXXXXX
Sbjct: 92  ISCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARXXXXXXXXXXXXXXXXX 151

Query: 166 XXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGLEL--AQFPSEVNSPAVFRC 225
           XXXXXXXXXXXXX             S+++  RLPS ++GLE+  A FP EV+S A+FRC
Sbjct: 152 XXXXXXXXXXXXXIPKRHRDPTLPGTSSSS--RLPSHSAGLEMGEASFPGEVSSDALFRC 211

Query: 226 VKVSAMDD-ADEEFAYQTAVNIGGHVFKGILYDQGPEVRY 263
           VK+S +DD  D ++AYQT VNIGGH+FKGILYDQGPE  Y
Sbjct: 212 VKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSY 249

[Close]

BLAST of Carg11768 vs. Swiss-Prot
Match: sp|Q9FXH7|SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-43
Identity = 146/319 (45.77%), Postives = 179/319 (56.11%), Query Frame = 0


Query: 28  LFMYRNEEIY--NKGFEIWPQQYTNHHQNPSL----TDHLSFGVGPSRRSFMINDSDEPS 87
           L++Y+ +EIY  NKGFEI+P                T+  SFG+ PS  +  IN++   +
Sbjct: 32  LYLYK-DEIYNNNKGFEIFPXXXXXXXXXXXXXXXPTNLYSFGMVPSGGN--INNNRSTN 91

Query: 88  RSA-FTVM---RPAXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 147
           RS  F V+    P               MNCQDCGNQAKKDC ++RCRTCCKSRGF CQT
Sbjct: 92  RSLYFNVVSDHEPVRSSTGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQT 151

Query: 148 HVKSTWVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACP 207
           HVKSTWV A                        XXXXXXXXXXXXXXXXXXXXX    C 
Sbjct: 152 HVKSTWVSAAKRRERQAQLAVLPAKRIRDANSRXXXXXXXXXXXXXXXXXXXXXXXXXCT 211

Query: 208 RLPSI-TSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 267
           R+ +  +SGLE +  P E++SPAVFRC++VS++DD DEE+AYQTAV+IGGHVFKGILYDQ
Sbjct: 212 RVVNASSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQ 271

Query: 268 GPEVRYTAAGESSSGHGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXX 327
           GP   +     SSS +G     H LNL+  + +A  T+                      
Sbjct: 272 GPSSDHHR--YSSSLNGETSHQHHLNLMDSTPSAA-TTNAVTAVNTNNGSIDPSSLYTAV 331

Query: 328 XAPLNAFMA-GTQFFPPSR 335
             P NAF+A GT FF  SR
Sbjct: 332 ATPFNAFVAGGTPFFASSR 344

[Close]

BLAST of Carg11768 vs. Swiss-Prot
Match: sp|Q9XGX0|SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 6.5e-41
Identity = 112/282 (39.72%), Postives = 137/282 (48.58%), Query Frame = 0


Query: 58  TDHLSFGVGPSRRSFMINDSDEPSRSAFTVMRPAXXXXXXXXXXXXXXMNCQDCGNQAKK 117
           T     GVGPS RS +     E S  A  +MR                 +CQDCGNQ+KK
Sbjct: 84  TSAAGLGVGPSNRSLI-----ETSGGALMMMRSGSGSGGP---------SCQDCGNQSKK 143

Query: 118 DCAYLRCRTCCKSRGFQCQTHVKSTWVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 177
             +++RCRTCCKSRG  C THVKSTWVPA                               
Sbjct: 144 XXSHMRCRTCCKSRGLDCPTHVKSTWVPA----------AKRRERQQQLSTGQQPQQLGG 203

Query: 178 XXXXXXXXXXXXXXSATACPRLPS-ITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEF 237
                         ++ A  R+PS  TSGLE+  FP EV+S AVFRCV+VS++DD +EE+
Sbjct: 204 SVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEEY 263

Query: 238 AYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTHPLNLIA---GSSNAGPT 297
           AY+TAV+IGGHVFKG+LYDQGP      A  SSSG    G + PLNLI     +S++ P 
Sbjct: 264 AYKTAVSIGGHVFKGVLYDQGP------AERSSSG----GGSQPLNLITAGPSASSSSPN 323

Query: 298 SXXXXXXXXXXXXXXXXXXXXXXXAPLNAFMAGTQFFPPSRS 336
                                    P+N FM GT FF  SRS
Sbjct: 324 VSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTHFFSNSRS 331

[Close]

BLAST of Carg11768 vs. Swiss-Prot
Match: sp|Q9SD40|SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 4.3e-37
Identity = 78/153 (50.98%), Postives = 97/153 (63.40%), Query Frame = 0


Query: 106 MNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAXXXXXXXXXXXXXXXXXXX 165
           ++CQDCGNQAKKDC+++RCRTCCKSRGF+C THV+STWVPA                   
Sbjct: 142 VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPA--------AKRRERQQQLA 201

Query: 166 XXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGLELAQFPSEVNSPAVFRCVK 225
                                     S+  C R+PS  SGLE+  FP+EV+S AVFRCV+
Sbjct: 202 TVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPS-HSGLEVGNFPAEVSSSAVFRCVR 261

Query: 226 VSAMDDADEEFAYQTAVNIGGHVFKGILYDQGP 259
           VS+++D +EEFAYQTAV+IGGH+FKGILYD GP
Sbjct: 262 VSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGP 285

[Close]

BLAST of Carg11768 vs. Swiss-Prot
Match: sp|Q9LQZ5|SRS5_ARATH (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-36
Identity = 133/239 (55.65%), Postives = 152/239 (63.60%), Query Frame = 0


Query: 106 MNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAXXXXXXXXXXXXXXXXXXX 165
           MNCQDCGNQAKKDC ++RCRTCCKSRGF CQTHVKSTWVPA                   
Sbjct: 123 MNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHHSAS 182

Query: 166 XXXXXXXXXXXXXXXXXXXXXXXXXXS-----ATACPRLPSITSGLELAQ-FPSEVNSPA 225
             XXXXXXXXXXXXXXXXXXXXXXXX      A       +  SGLE++Q  P EVNSPA
Sbjct: 183 SRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANTRVVNANSNSGLEVSQHLPPEVNSPA 242

Query: 226 VFRCVKVSAM--DDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGS 285
           +FRCV+VS++  D+ D+ +AYQTAVNIGGH+FKGILYDQGPE +                
Sbjct: 243 IFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQ---------------D 302

Query: 286 THPLNLIAGSS-NAGPTSXXXXXXXXXXXXXXXXXXXXXXXAPLNAFMAGTQFFPPSRS 336
            H LNL+A ++       XXXXXXXXXXXX           A LN+F+AGT FF P RS
Sbjct: 303 NHHLNLLASTAXXXXXXXXXXXXXXXXXXXGLMLDPSSLYPAQLNSFIAGTPFFTPPRS 346

[Close]

BLAST of Carg11768 vs. Swiss-Prot
Match: sp|O65517|SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-34
Identity = 106/160 (66.25%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 106 MNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAXXXXXXXXXXXXXXXXXXX 165
           ++C+DCGNQAKKDC ++RCRTCCKSRGF C THV+STW+P   XXXXXXXXXXXXXXXXX
Sbjct: 92  ISCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARXXXXXXXXXXXXXXXXX 151

Query: 166 XXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGLEL--AQFPSEVNSPAVFRC 225
           XXXXXXXXXXXXX             S+++  RLPS ++GLE+  A FP EV+S A+FRC
Sbjct: 152 XXXXXXXXXXXXXIPKRHRDPTLPGTSSSS--RLPSHSAGLEMGEASFPGEVSSDALFRC 211

Query: 226 VKVSAMDD-ADEEFAYQTAVNIGGHVFKGILYDQGPEVRY 263
           VK+S +DD  D ++AYQT VNIGGH+FKGILYDQGPE  Y
Sbjct: 212 VKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSY 249

[Close]

BLAST of Carg11768 vs. TrEMBL
Match: tr|A0A0A0LNQ5|A0A0A0LNQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G364580 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96
Identity = 272/319 (85.27%), Postives = 279/319 (87.46%), Query Frame = 0


Query: 28  LFMYRN-EEIYNKGFEIWPQQYT------NHHQNPSLTDHLSFGVGPSRRSFMIND-SDE 87
           LF+YRN +EIYNKGFEIWPQQY             SL +HLSFGVGPSRRSFMIND SDE
Sbjct: 29  LFLYRNDQEIYNKGFEIWPQQYNXXXXXXXXXXXXSLPNHLSFGVGPSRRSFMINDPSDE 88

Query: 88  PSRSAFTVMRPA--XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 147
           PSRSAFT+MRPA  XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT
Sbjct: 89  PSRSAFTLMRPAAXXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 148

Query: 148 HVKSTWVP-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATAC 207
           HVKSTWVP A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    C
Sbjct: 149 HVKSTWVPAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC 208

Query: 208 PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 267
           PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ
Sbjct: 209 PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 268

Query: 268 GPEVRYTAAGESSSGHGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXX 327
           GPE+RYTAAGESSSGHGGDGSTHPLNLIAG ++     XXXXXXXXXXXXX         
Sbjct: 269 GPELRYTAAGESSSGHGGDGSTHPLNLIAGPTSXXXXXXXXXXXXXXXXXXAPLLDPSIY 328

Query: 328 XAPLNAFMAGTQFFPPSRS 336
            APLNAFMAGTQFFPPSRS
Sbjct: 329 PAPLNAFMAGTQFFPPSRS 347

[Close]

BLAST of Carg11768 vs. TrEMBL
Match: tr|A0A1S3BB54|A0A1S3BB54_CUCME (protein SHI RELATED SEQUENCE 5-like OS=Cucumis melo OX=3656 GN=LOC103488016 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.3e-96
Identity = 274/319 (85.89%), Postives = 280/319 (87.77%), Query Frame = 0


Query: 28  LFMYRN-EEIYNKGFEIWPQQYT------NHHQNPSLTDHLSFGVGPSRRSFMIND-SDE 87
           LF+YRN +EIYNKGFEIWPQQY             SL +HLSFGVGPSRRSFMIND SDE
Sbjct: 29  LFLYRNDQEIYNKGFEIWPQQYNXXXXXXXXXXXXSLPNHLSFGVGPSRRSFMINDPSDE 88

Query: 88  PSRSAFTVMRPA--XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 147
           PSRSAFT+MRPA  XXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT
Sbjct: 89  PSRSAFTLMRPAAXXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQT 148

Query: 148 HVKSTWVPA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATAC 207
           HVKSTWVPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AC
Sbjct: 149 HVKSTWVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAC 208

Query: 208 PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 267
           PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ
Sbjct: 209 PRLPSITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQ 268

Query: 268 GPEVRYTAAGESSSGHGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXX 327
           GPE+RYTAAGESSSGHGGDGSTHPLNLI G +      XXXXXXXXXXXXXX        
Sbjct: 269 GPELRYTAAGESSSGHGGDGSTHPLNLITGPTXXXXXXXXXXXXXXXXXXXXPLLDPSIY 328

Query: 328 XAPLNAFMAGTQFFPPSRS 336
            APLNAFMAGTQFFPPSRS
Sbjct: 329 PAPLNAFMAGTQFFPPSRS 347

[Close]

BLAST of Carg11768 vs. TrEMBL
Match: tr|E6NU70|E6NU70_JATCU (JHL18I08.14 protein OS=Jatropha curcas OX=180498 GN=JHL18I08.14 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.6e-74
Identity = 202/311 (64.95%), Postives = 222/311 (71.38%), Query Frame = 0


Query: 28  LFMYR--NEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAF 87
           LF+YR  NE+IYNKGFEIWPQ Y   HQ  ++ ++ SFGVGPSRRSF    SDE SRS F
Sbjct: 28  LFLYRSNNEQIYNKGFEIWPQYY---HQQQNMNNYSSFGVGPSRRSF----SDESSRSGF 87

Query: 88  TVMRPAXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVP 147
           TVMR           XXXXXMNCQDCGNQAKKDCA+LRCRTCCKSRGFQCQTHVKSTWVP
Sbjct: 88  TVMRQG------GLGXXXXXMNCQDCGNQAKKDCAHLRCRTCCKSRGFQCQTHVKSTWVP 147

Query: 148 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-ATACPRLPSITS 207
           AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             + + AC RL + TS
Sbjct: 148 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGENPKRQRENQGGAPSLACTRLGTTTS 207

Query: 208 GLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTA 267
           GLE+A FP EVNSPAVFRCVKVSAMDDADE+FAYQTAVNIGGH+F+G+LYDQGP+ RYT+
Sbjct: 208 GLEVAHFPPEVNSPAVFRCVKVSAMDDADEQFAYQTAVNIGGHMFRGLLYDQGPDSRYTS 267

Query: 268 AGESSSGHGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXXXAPLNAFM 327
            GESSS     G    LNLI  +     T+                       APLNAF+
Sbjct: 268 GGESSS-----GGAQQLNLITAA-----TTSTEATPSNQQGTGALIDPSSLYPAPLNAFI 315

Query: 328 AGTQFFPPSRS 336
           AGTQFFPP RS
Sbjct: 328 AGTQFFPPPRS 315

[Close]

BLAST of Carg11768 vs. TrEMBL
Match: tr|A0A061FDV1|A0A061FDV1_THECC (SHI-related sequence 7, putative OS=Theobroma cacao OX=3641 GN=TCM_034142 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 202/310 (65.16%), Postives = 217/310 (70.00%), Query Frame = 0


Query: 28  LFMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDE-PSRSA-F 87
           L++YRNEEIYNKGFE+WPQ Y   +Q  ++ ++ SFG GPSRR+   N SDE  SRSA F
Sbjct: 27  LYLYRNEEIYNKGFELWPQYY---YQQQNVNNY-SFGAGPSRRTSGFNLSDESSSRSAGF 86

Query: 88  TVMRPAXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVP 147
           TVMR                MNCQDCGNQAKKDC +LRCRTCCKSRGFQCQTHVKSTWVP
Sbjct: 87  TVMRQG-------------GMNCQDCGNQAKKDCTHLRCRTCCKSRGFQCQTHVKSTWVP 146

Query: 148 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSG 207
           A XXXXXXXXXXXXXXXXXXXXXXXXXXXX                S  AC RL   TSG
Sbjct: 147 ASXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRGENPKRQRENQGAPS-LACTRLSPTTSG 206

Query: 208 LELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAA 267
           LEL Q+P EVNSPAVFRCVKVSAMDDADEEFAYQTAVNI GHVFKGILYDQGPE RYT+ 
Sbjct: 207 LELGQYPPEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIAGHVFKGILYDQGPESRYTSG 266

Query: 268 GESSSGHGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXXXAPLNAFMA 327
           GESS          PL+LI   +      XXXXXXXXXXX            APLNAF+A
Sbjct: 267 GESS---------QPLDLI---TXXXXXXXXXXXXXXXXXPGTSMLDPSLYPAPLNAFIA 306

Query: 328 GTQFFPPSRS 336
           GTQFFPP RS
Sbjct: 327 GTQFFPPPRS 306

[Close]

BLAST of Carg11768 vs. TrEMBL
Match: tr|A0A2I4ENQ9|A0A2I4ENQ9_9ROSI (protein SHI RELATED SEQUENCE 1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108991308 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.9e-67
Identity = 189/307 (61.56%), Postives = 210/307 (68.40%), Query Frame = 0


Query: 29  FMYRNEEIYNKGFEIWPQQYTNHHQNPSLTDHLSFGVGPSRRSFMINDSDEPSRSAFTVM 88
           F+YRNEEIYNKGFEIWPQ Y    Q  +++++ SFGVGPSRR+ + + SDE SRS  T++
Sbjct: 28  FLYRNEEIYNKGFEIWPQYY---QQQQNMSNYYSFGVGPSRRN-LNSVSDESSRSGLTLI 87

Query: 89  RPAXXXXXXXXXXXXXXMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAXX 148
           R                MNCQDCGNQAKKDC++LRCRTCCKSRGFQCQTHVKSTWVPA  
Sbjct: 88  RQG---------GVGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAK 147

Query: 149 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATACPRLPSITSGLEL 208
            XXXXXXXXXXXXXXXXXXXXXXXXXX                +  AC R+P+ TSGLE 
Sbjct: 148 RXXXXXXXXXXXXXXXXXXXXXXXXXXFRGENPKRQRDNQLGAAPLACTRIPNTTSGLER 207

Query: 209 AQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPEVRYTAAGES 268
            QFP+EVNSPAVFRCV+V AM+D DE++AYQTAVNIGGHVFKGILYDQG E RYT  GES
Sbjct: 208 GQFPAEVNSPAVFRCVRVGAMEDPDEQYAYQTAVNIGGHVFKGILYDQGREDRYTTVGES 267

Query: 269 SSGHGGDGSTHPLNLIAGSSNAGPTSXXXXXXXXXXXXXXXXXXXXXXXAPLNAFMAGTQ 328
                                     XXXXXXXXXXXXXX         APLNAFMAGTQ
Sbjct: 268 --------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLDPSLFPAPLNAFMAGTQ 313

Query: 329 FFPPSRS 336
           FFPP RS
Sbjct: 328 FFPPPRS 313

The following BLAST results are available for this feature:

BLAST of Carg11768 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996783.1	1.1e-116	95.16	protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]	[more]
XP_023546679.1	2.2e-114	98.07	protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962177.1	1.7e-111	96.13	protein SHI RELATED SEQUENCE 1-like [Cucurbita moschata]	[more]
XP_004152766.1	2.7e-96	85.27	PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis sativus] >KGN62649.1 hyp...	[more]
XP_008444770.1	3.5e-96	85.89	PREDICTED: protein SHI RELATED SEQUENCE 5-like [Cucumis melo]	[more]

BLAST of Carg11768 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19790.1	5.9e-45	45.77	SHI-related sequence 7	[more]
AT5G66350.1	3.6e-42	39.72	Lateral root primordium (LRP) protein-related	[more]
AT3G51060.1	2.4e-38	50.98	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	1.6e-37	55.65	SHI-related sequence 5	[more]
AT4G36260.1	6.5e-36	66.25	Lateral root primordium (LRP) protein-related	[more]

BLAST of Carg11768 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FXH7\|SRS7_ARATH	1.1e-43	45.77	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]
sp\|Q9XGX0\|SHI_ARATH	6.5e-41	39.72	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
sp\|Q9SD40\|SRS1_ARATH	4.3e-37	50.98	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
sp\|Q9LQZ5\|SRS5_ARATH	2.8e-36	55.65	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
sp\|O65517\|SRS2_ARATH	1.2e-34	66.25	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]

BLAST of Carg11768 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LNQ5\|A0A0A0LNQ5_CUCSA	1.8e-96	85.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G364580 PE=4 SV=1	[more]
tr\|A0A1S3BB54\|A0A1S3BB54_CUCME	2.3e-96	85.89	protein SHI RELATED SEQUENCE 5-like OS=Cucumis melo OX=3656 GN=LOC103488016 PE=4...	[more]
tr\|E6NU70\|E6NU70_JATCU	5.6e-74	64.95	JHL18I08.14 protein OS=Jatropha curcas OX=180498 GN=JHL18I08.14 PE=4 SV=1	[more]
tr\|A0A061FDV1\|A0A061FDV1_THECC	1.9e-69	65.16	SHI-related sequence 7, putative OS=Theobroma cacao OX=3641 GN=TCM_034142 PE=4 S...	[more]
tr\|A0A2I4ENQ9\|A0A2I4ENQ9_9ROSI	3.9e-67	61.56	protein SHI RELATED SEQUENCE 1-like isoform X1 OS=Juglans regia OX=51240 GN=LOC1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007818	SHI
IPR006511	SHI_C
IPR006510	Znf_LRP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11768-RA	Carg11768-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 107..149 e-value: 4.2E-27 score: 91.8
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 210..258 e-value: 8.4E-27 score: 90.8
None	No IPR available	PFAM	PF05142	DUF702	coord: 105..259 e-value: 4.9E-68 score: 228.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..306
None	No IPR available	PANTHER	PTHR31604:SF3	PROTEIN SHI RELATED SEQUENCE 5-RELATED	coord: 1..335
IPR007818	SHI protein family	PANTHER	PTHR31604	FAMILY NOT NAMED	coord: 1..335

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11768	Cla022450	Watermelon (97103) v1	carwmB0172
Carg11768	Cla020803	Watermelon (97103) v1	carwmB0174
Carg11768	Csa3G865400	Cucumber (Chinese Long) v2	carcuB0203
Carg11768	Csa2G364580	Cucumber (Chinese Long) v2	carcuB0202
Carg11768	MELO3C010984	Melon (DHL92) v3.5.1	carmeB0186
Carg11768	ClCG08G014580	Watermelon (Charleston Gray)	carwcgB0178
Carg11768	ClCG05G018620	Watermelon (Charleston Gray)	carwcgB0176
Carg11768	CSPI03G43120	Wild cucumber (PI 183967)	carcpiB0210
Carg11768	CSPI02G20570	Wild cucumber (PI 183967)	carcpiB0209
Carg11768	Cucsa.342770	Cucumber (Gy14) v1	carcgyB0223
Carg11768	CmaCh05G002810	Cucurbita maxima (Rimu)	carcmaB0256
Carg11768	CmaCh12G004300	Cucurbita maxima (Rimu)	carcmaB0249
Carg11768	CmaCh01G019390	Cucurbita maxima (Rimu)	carcmaB0252
Carg11768	CmoCh12G003810	Cucurbita moschata (Rifu)	carcmoB0257
Carg11768	CmoCh05G002870	Cucurbita moschata (Rifu)	carcmoB0263
Carg11768	CmoCh01G020010	Cucurbita moschata (Rifu)	carcmoB0260
Carg11768	Lsi04G017130	Bottle gourd (USVL1VR-Ls)	carlsiB163
Carg11768	Lsi08G013510	Bottle gourd (USVL1VR-Ls)	carlsiB164
Carg11768	Cp4.1LG07g03780	Cucurbita pepo (Zucchini)	carcpeB0268
Carg11768	Cp4.1LG02g07790	Cucurbita pepo (Zucchini)	carcpeB0265
Carg11768	Cp4.1LG11g02260	Cucurbita pepo (Zucchini)	carcpeB0263
Carg11768	CsGy2G020300	Cucumber (Gy14) v2	carcgybB0195
Carg11768	CsGy3G040700	Cucumber (Gy14) v2	carcgybB0196
Carg11768	MELO3C010984.2	Melon (DHL92) v3.6.1	carmedB0190
Carg11768	CsaV3_3G045570	Cucumber (Chinese Long) v3	carcucB0210
Carg11768	CsaV3_2G029220	Cucumber (Chinese Long) v3	carcucB0209
Carg11768	Cla97C05G099960	Watermelon (97103) v2	carwmbB0188
Carg11768	Cla97C08G158100	Watermelon (97103) v2	carwmbB0190
Carg11768	Bhi04G000199	Wax gourd	carwgoB0232

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11768	Carg17170	Silver-seed gourd	carcarB226
Carg11768	Carg04015	Silver-seed gourd	carcarB227

The following block(s) are covering this gene:

None