Carg11742 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11742
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	26S protease regulatory subunit 6B homolog
Location	Cucurbita_argyrosperma_scaffold_035 : 1229034 .. 1233172 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCGTCCTGTCTTTTGCTTTCTTACTCGGAGAAGGAAGAATCGCAAAACCAGAATGGCTGCCGCAGCTATGGTTCTTGATCCCAAATCCTCACTGGAGCCACCGGCATCGTTCCCATCGATGAGATCTGATCTCCAAGGCCTGGCGGAACAGTCCTCCGACGAGGATGACCTTTACAGCCGTCTGAAATCGCTGCAGCGGCAGTTGGAGTTCATAGACATTCAAGAGGAATATGTGAAGGATGAACAGAAGAACTTGAAGCGCGAGCTTCTACGAGCACAGGAAGAGGTTAAAAGGATACAGTCGGTGCCTTTGGTAATCGGTCAATTCATGGAAATGGTCGATCAGAATAATGGGATTGTTGGATCCACAACTGGTTCCAATTATTATGTCAGGATTCTCAGCACTATTAATCGCGAACTTCTTAAACCCTCGGCCTCCGTAGCTTTGCACCGTCACTCTAATGCGTTAGTCGACGTATTGCCTCCTGAGGCCGACTCTAGTATATCTCTGCTCAGCCAGTCGGAGAAGCCTGACGTGACCTATAATGTGAGTTTTAAATTATTTTTTTTTTCGTAAATTGTTCGAATTTGCATAATGATGTTGCTTTCGGCGTTCTTGTATTTCTCCGTTTGTTATAATAGAATTAGGGTTTAAGTGGAATCCAGTCTTGTTATTTTGAGTTGAACTCTTTATAAATTTGGATACCATCTTGTTCGTAATCGCAAATTGAAAAGAGGGTTCGATTGTTCTTCTAAATAGTTGGTGATCGTTCGACAGAAAAGTTCTATGAAATTTGATAATGCGTAATTGTTTTGTCGTTTTAATCGAAAATTAGCATTTTCCGAAAGATTAATGTCACATTTTTATGATTTCGAAAGGTTTTGAGGGTTTCTTTTGTAGCGTCTTTCCCTTGGGTTTAAATGTGTGGAAGACTACTCAATTCGACTTAACTGTAAGGAAAGACGAAAGATTCCTTCTTGATCTTGATCTGATCCTCAACTCTCGATTCATGAAACAGTAAACACTCCTTATTCATCGAGGCTCAACCAACCTATCTTTATTCATTCTTTCTCTTTCGATTCATGATCCTGTAAACACTCTCGAAGAATCAATGATCCTTCACTGTCAGGAAAGACTATCGATTAACGATCGTTCACTGTCAGTCAAGACTATACGCATTTTCTGCATAAAACACAGTTTGATAGCCTTAACTTTTTGCCAAGGTTCACCTTATTCACTCTCGAGTATTTTGAAATGCGTGTGAGGTTGCCTACTTTGATTTAGCTGTTCAGACTCTATTTATTTCTTCTGACTTGATATTAATTCTTCCTCGTATCATGTTTCCCTTAAGGAAGGTTTTTGAAAATGAAGGGAGTTCGAAAAATTGCTTACTGGTTTCTTCTTAATCATTTTTAGGATATTGGTGGATGTGATATCCAAAAGCAAGAGATTCGTGAAGCAGTGGAGTTACCTCTTACTCACCATGAACTGTACAAACAAATTGGTATTGATCCTCCTCGAGGTGTTTTGCTTTATGGTCCCCCTGGAACTGGTAAAACCATGCTTGCTAAGGCTGTTGCTAATCATACAACTGCTGCCTTTATCAGAGTTGTTGGTTCTGAATTTGTTCAGAAGTATTTGGGTGAGGTATGTTTGGAGTTTTCTATTTATCTTTTATAATTTCATTACTTGTTCATTTTCCAACTTGTTTTACTACGACTAAGTTTGTGAGACGTTCTTTTACATGAACTACCAATTCAATATTGGTTGTTTGTAGGAAACTAGCCATTGATTTTACATGAGATGTGTTCTTAATCTCAATTTCTATAATCATGTTAGATAGAGTGAAGCTGACGGGTTTTTCAAGTTCAATTTTTGTTGGAGATCTTTTCGAGATTCAGTTTTATGCTCTTTCTATTCAATTTCAGGGCCCAAGAATGGTTCGTGATGTTTTCCGCCTTGCTAAGGAAAATGCCCCTGCAATTATCTTTATTGATGAGGTTGATGCCATAGCAACAGCCCGTTTTGATGCTCAAACAGGAGCAGATAGAGAAGTGCAGCGTATTCTCATGGAGCTTTTAAATCAGGTACGATATGCATAAAATGTGGATCCCATTTCACAAGGTTATTGATGCTGTGATTCTCTTATGCGGATACTGGTTGCTAATTTTCTGAGATTAATTAGGAGTGGGATTTTTAAGCGTTATATTAGTAGTAATGAATAATTTTCTAATGATTACTGATTCATTTAGTTTTCAACTTACTTTTAATTTTGGTAGATGGATGGGTTCGACCAGACAGTGAATGTTAAGGTCATCATGGCAACGAATAGGGCTGACACATTGGATCCTGCACTCCTACGTCCTGGAAGACTCGACAGGAAGATAGAATTCCCTTTACCTGATCGCAGACAAAAGAGGCTGGTATTTCAGGTAAATCTTGCAAAATATTTTATTTTAAGCTCGCTCTATATTGTTTCTCCTGTAGTACTGCAGGAGTGGCTTCTTGATGTATTTATAATATGTCTCTCTTCAGCTCTCACCCTTCCAGATGGCCGAACTAATATTAAACATCTTTAGTTTTGGCTATGCATGCTGTGAGATTTGCATTTCACTGCTGTCTACCTGCCAATTTTAGTTTATAAATTCTCTATGGTTCTATGTAGGTTTGTACTGCTAAAATGAACTTGAGTGATGAAGTGGATCTAGAGGATTATGTTTCTCGCCCGGACAAAATCAGTGCTGCTGAGGTTCGTAATTGAAATGTCGTTTTGTGCAGTAAATGTGTTTAGCTTAGTTATTGTCCATCAGAAGTAATTACAGTAGAAGTCTTCTTTTGAACATCTCAATACTGAAAAGTTATCTAATTTATTCTCTTTTCTTCCTGTTATTCTTTTTTATTTTTTGTCCCATATCCTTTCGAACTCATTTTTGATATCATTGAAGCCTGAAGAACCTTGTTTTTTGAAGTGCATAGTGTACCATTAGATGATAAAACACTGCGTTTGATTCATTCTTCTGGTTTACTTCTCCAGTCTCATTACCTTGCAGCATATAATCCTCTTCCTCCACGCCACTTTTAGAATTAGATTCTGAGAGAATAGGGTGTGGGGTTGTTAACTGGAGTAAAATATGGGAATAGAGTGTAGGCAAGAGAGACACATTGTTCGTGGCTTTCTGGGATTAGTTAAGTAAAGAGATTTAGAAAGGAATGCTTGTCTGAAGAAATTCCATGCTCCTTAATTGTTAAAAATGCTGTTACAGTCTTCCTATCATGTAGGAGCAGTTAGTTGGCATCTAGTGTTGAATTAGATTACAAAAACAAATTTTGTGCATCATTTTCCCCCCTTCTTTATGGAGTTCAACATTAATCAGTAGTTGTGATGGCCAACTGCAGATCGCCGCCATCTGTCAAGAAGCTGGGATGCACGCGGTTCGTAAGAACAGATATGTGATACTCCCGAAGGATTTCGAGAAGGGATACAGAACCAACGTGAAGAAGCCTGATACCGACTTTGAATTCTACAAATGATCCTCAGAGGTGGAAGTGAAATCTGGGTATGATGATGATCATAATTACAGATTGATTTACTTCACCTGGAGATGATGGCATGGATAAAGGGTTGGTATTCTCCTTGTATCAATCTGTTACTCCTTGCCCTGTACTCTCAATTTTAGCGTTCATTTAGAATGCTGCTCTTGCTCAAACTAGATTTGTTTGTTCTTAATGGAAACTGCTGTAATGTATCCTATCCAAGCATTGAGTGGAAGTGTGTGTGTGTAAGCTATTGGTAATTTGAAGATAGTTTAGGGTAGAATCGTGTTGTTTTAGAGATCCAGGAGAGTGAAGGGAAACGGTGGTCCCCTTGAAACGAAAGGCATGATTCAACATCCAAATTCTGATGTGATACCAAAAATTAGAGTGATTATAGAAGGACAAAATGTTGGCCTGGACTCGGTAATCCTTTGGATGCCAAGTGGACTGTGGACTGGCCGTTCACTGCGGCGAGATTAGAGTGAGAGTCTCTACAATTTTACTTTTGCTTTTTACCTTTTTTCTTTTTATTTACTACTCAACTTATTTATTTAAATAACCTTAACTTTTATATTTTATTTCTTCAAATTTTCATTGAAATT

mRNA sequence

CATCGTCCTGTCTTTTGCTTTCTTACTCGGAGAAGGAAGAATCGCAAAACCAGAATGGCTGCCGCAGCTATGGTTCTTGATCCCAAATCCTCACTGGAGCCACCGGCATCGTTCCCATCGATGAGATCTGATCTCCAAGGCCTGGCGGAACAGTCCTCCGACGAGGATGACCTTTACAGCCGTCTGAAATCGCTGCAGCGGCAGTTGGAGTTCATAGACATTCAAGAGGAATATGTGAAGGATGAACAGAAGAACTTGAAGCGCGAGCTTCTACGAGCACAGGAAGAGGTTAAAAGGATACAGTCGGTGCCTTTGGTAATCGGTCAATTCATGGAAATGGTCGATCAGAATAATGGGATTGTTGGATCCACAACTGGTTCCAATTATTATGTCAGGATTCTCAGCACTATTAATCGCGAACTTCTTAAACCCTCGGCCTCCGTAGCTTTGCACCGTCACTCTAATGCGTTAGTCGACGTATTGCCTCCTGAGGCCGACTCTAGTATATCTCTGCTCAGCCAGTCGGAGAAGCCTGACGTGACCTATAATGATATTGGTGGATGTGATATCCAAAAGCAAGAGATTCGTGAAGCAGTGGAGTTACCTCTTACTCACCATGAACTGTACAAACAAATTGGTATTGATCCTCCTCGAGGTGTTTTGCTTTATGGTCCCCCTGGAACTGGTAAAACCATGCTTGCTAAGGCTGTTGCTAATCATACAACTGCTGCCTTTATCAGAGTTGTTGGTTCTGAATTTGTTCAGAAGTATTTGGGTGAGGGCCCAAGAATGGTTCGTGATGTTTTCCGCCTTGCTAAGGAAAATGCCCCTGCAATTATCTTTATTGATGAGGTTGATGCCATAGCAACAGCCCGTTTTGATGCTCAAACAGGAGCAGATAGAGAAGTGCAGCGTATTCTCATGGAGCTTTTAAATCAGATGGATGGGTTCGACCAGACAGTGAATGTTAAGGTCATCATGGCAACGAATAGGGCTGACACATTGGATCCTGCACTCCTACGTCCTGGAAGACTCGACAGGAAGATAGAATTCCCTTTACCTGATCGCAGACAAAAGAGGCTGGTATTTCAGGTTTGTACTGCTAAAATGAACTTGAGTGATGAAGTGGATCTAGAGGATTATGTTTCTCGCCCGGACAAAATCAGTGCTGCTGAGATCGCCGCCATCTGTCAAGAAGCTGGGATGCACGCGGTTCGTAAGAACAGATATGTGATACTCCCGAAGGATTTCGAGAAGGGATACAGAACCAACGTGAAGAAGCCTGATACCGACTTTGAATTCTACAAATGATCCTCAGAGGTGGAAGTGAAATCTGGGTATGATGATGATCATAATTACAGATTGATTTACTTCACCTGGAGATGATGGCATGGATAAAGGGTTGGTATTCTCCTTGTATCAATCTGTTACTCCTTGCCCTGTACTCTCAATTTTAGCGTTCATTTAGAATGCTGCTCTTGCTCAAACTAGATTTGTTTGTTCTTAATGGAAACTGCTGTAATGTATCCTATCCAAGCATTGAGTGGAAGTGTGTGTGTGTAAGCTATTGGTAATTTGAAGATAGTTTAGGGTAGAATCGTGTTGTTTTAGAGATCCAGGAGAGTGAAGGGAAACGGTGGTCCCCTTGAAACGAAAGGCATGATTCAACATCCAAATTCTGATGTGATACCAAAAATTAGAGTGATTATAGAAGGACAAAATGTTGGCCTGGACTCGGTAATCCTTTGGATGCCAAGTGGACTGTGGACTGGCCGTTCACTGCGGCGAGATTAGAGTGAGAGTCTCTACAATTTTACTTTTGCTTTTTACCTTTTTTCTTTTTATTTACTACTCAACTTATTTATTTAAATAACCTTAACTTTTATATTTTATTTCTTCAAATTTTCATTGAAATT

Coding sequence (CDS)

ATGGCTGCCGCAGCTATGGTTCTTGATCCCAAATCCTCACTGGAGCCACCGGCATCGTTCCCATCGATGAGATCTGATCTCCAAGGCCTGGCGGAACAGTCCTCCGACGAGGATGACCTTTACAGCCGTCTGAAATCGCTGCAGCGGCAGTTGGAGTTCATAGACATTCAAGAGGAATATGTGAAGGATGAACAGAAGAACTTGAAGCGCGAGCTTCTACGAGCACAGGAAGAGGTTAAAAGGATACAGTCGGTGCCTTTGGTAATCGGTCAATTCATGGAAATGGTCGATCAGAATAATGGGATTGTTGGATCCACAACTGGTTCCAATTATTATGTCAGGATTCTCAGCACTATTAATCGCGAACTTCTTAAACCCTCGGCCTCCGTAGCTTTGCACCGTCACTCTAATGCGTTAGTCGACGTATTGCCTCCTGAGGCCGACTCTAGTATATCTCTGCTCAGCCAGTCGGAGAAGCCTGACGTGACCTATAATGATATTGGTGGATGTGATATCCAAAAGCAAGAGATTCGTGAAGCAGTGGAGTTACCTCTTACTCACCATGAACTGTACAAACAAATTGGTATTGATCCTCCTCGAGGTGTTTTGCTTTATGGTCCCCCTGGAACTGGTAAAACCATGCTTGCTAAGGCTGTTGCTAATCATACAACTGCTGCCTTTATCAGAGTTGTTGGTTCTGAATTTGTTCAGAAGTATTTGGGTGAGGGCCCAAGAATGGTTCGTGATGTTTTCCGCCTTGCTAAGGAAAATGCCCCTGCAATTATCTTTATTGATGAGGTTGATGCCATAGCAACAGCCCGTTTTGATGCTCAAACAGGAGCAGATAGAGAAGTGCAGCGTATTCTCATGGAGCTTTTAAATCAGATGGATGGGTTCGACCAGACAGTGAATGTTAAGGTCATCATGGCAACGAATAGGGCTGACACATTGGATCCTGCACTCCTACGTCCTGGAAGACTCGACAGGAAGATAGAATTCCCTTTACCTGATCGCAGACAAAAGAGGCTGGTATTTCAGGTTTGTACTGCTAAAATGAACTTGAGTGATGAAGTGGATCTAGAGGATTATGTTTCTCGCCCGGACAAAATCAGTGCTGCTGAGATCGCCGCCATCTGTCAAGAAGCTGGGATGCACGCGGTTCGTAAGAACAGATATGTGATACTCCCGAAGGATTTCGAGAAGGGATACAGAACCAACGTGAAGAAGCCTGATACCGACTTTGAATTCTACAAATGA

Protein sequence

MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK

Homology

[Close]

BLAST of Carg11742 vs. NCBI nr
Match: XP_022947765.1 (26S proteasome regulatory subunit 6B homolog [Cucurbita moschata] >XP_023007178.1 26S proteasome regulatory subunit 6B homolog [Cucurbita maxima])

HSP 1 Score: 755.7 bits (1950), Expect = 8.0e-215
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0


Query: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60
           MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX
Sbjct: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360

Query: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Carg11742 vs. NCBI nr
Match: XP_008456254.1 (PREDICTED: 26S protease regulatory subunit 6B homolog [Cucumis melo])

HSP 1 Score: 753.1 bits (1943), Expect = 5.2e-214
Identity = 416/418 (99.52%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60
           MAA+AMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX
Sbjct: 1   MAASAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Carg11742 vs. NCBI nr
Match: XP_023533772.1 (26S proteasome regulatory subunit 6B homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 752.3 bits (1941), Expect = 8.9e-214
Identity = 416/418 (99.52%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60
           MAAAAMVLDPKSSLEPPASFPSMRS+LQGLAEQSSDEDDLYSRLKSLQRQLEF XXXXXX
Sbjct: 1   MAAAAMVLDPKSSLEPPASFPSMRSELQGLAEQSSDEDDLYSRLKSLQRQLEFXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360

Query: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Carg11742 vs. NCBI nr
Match: XP_022149692.1 (26S proteasome regulatory subunit 6B homolog [Momordica charantia])

HSP 1 Score: 749.6 bits (1934), Expect = 5.8e-213
Identity = 414/418 (99.04%), Postives = 415/418 (99.28%), Query Frame = 0


Query: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60
           MAA+AMVLDPK SLEPPASFPSMRSDLQG AEQSSDEDDLYSRLKSLQRQLEFIXXXXXX
Sbjct: 1   MAASAMVLDPKPSLEPPASFPSMRSDLQGFAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Carg11742 vs. NCBI nr
Match: XP_022944034.1 (26S proteasome regulatory subunit 6B homolog [Cucurbita moschata] >XP_022944035.1 26S proteasome regulatory subunit 6B homolog [Cucurbita moschata] >XP_022986872.1 26S proteasome regulatory subunit 6B homolog [Cucurbita maxima] >XP_022986873.1 26S proteasome regulatory subunit 6B homolog [Cucurbita maxima] >XP_023513123.1 26S proteasome regulatory subunit 6B homolog [Cucurbita pepo subsp. pepo] >XP_023513124.1 26S proteasome regulatory subunit 6B homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 749.6 bits (1934), Expect = 5.8e-213
Identity = 413/418 (98.80%), Postives = 414/418 (99.04%), Query Frame = 0


Query: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60
           MAA+AMVLDPKSSLEPPASFPS RSDL GLAEQSSDEDDLYSRLKSLQRQLEFI XXXXX
Sbjct: 1   MAASAMVLDPKSSLEPPASFPSTRSDLLGLAEQSSDEDDLYSRLKSLQRQLEFIDXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           XXXXXXXXXXXXXXXXXXX RIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360

Query: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Carg11742 vs. TAIR10
Match: AT5G58290.1 (regulatory particle triple-A ATPase 3)

HSP 1 Score: 688.3 bits (1775), Expect = 2.9e-198
Identity = 362/417 (86.81%), Postives = 372/417 (89.21%), Query Frame = 0


Query: 2   AAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXXX 61
           A A+MVLDPK+S       P++  DL      ++DE+DLY RLKSL+RQLEF        
Sbjct: 5   AVASMVLDPKAS-------PAL-MDL-----STADEEDLYGRLKSLERQLEFTDIQEEYV 64

Query: 62  XXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 121
                              RIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR
Sbjct: 65  KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 124

Query: 122 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV 181
           ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDV+YNDIGGCDIQKQEIREAV
Sbjct: 125 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAV 184

Query: 182 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 241
           ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG
Sbjct: 185 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 244

Query: 242 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 301
           EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ
Sbjct: 245 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 304

Query: 302 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLE 361
           TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCT+KMNLSDEVDLE
Sbjct: 305 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLE 364

Query: 362 DYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           DYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR NVKKPDTDFEFYK
Sbjct: 365 DYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEFYK 408

[Close]

BLAST of Carg11742 vs. TAIR10
Match: AT4G29040.1 (regulatory particle AAA-ATPase 2A)

HSP 1 Score: 368.6 bits (945), Expect = 5.0e-102
Identity = 172/320 (53.75%), Postives = 246/320 (76.88%), Query Frame = 0


Query: 82  IQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVD 141
           ++  P+ +G   E++D+N+ IV S+ G  YYV ILS ++++ L+P  S+ +H    ++V 
Sbjct: 105 LRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVG 164

Query: 142 VLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRG 201
           +L  E D  +S++   + P  +Y DIGG + Q QEI+EAVELPLTH ELY+ IGI PP+G
Sbjct: 165 ILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKG 224

Query: 202 VLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
           V+LYG PGTGKT+LAKAVAN T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284

Query: 262 IFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 321
           +FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD   +VKVI+ATNR ++LDPAL
Sbjct: 285 VFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPAL 344

Query: 322 LRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQE 381
           LRPGR+DRKIEFPLPD + +R +FQ+ T+KM LS++V+LE++V   D+ S A+I AIC E
Sbjct: 345 LRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTE 404

Query: 382 AGMHAVRKNRYVILPKDFEK 402
           AG+ A+R+ R  +   DF+K
Sbjct: 405 AGLLALRERRMKVTHPDFKK 424

[Close]

BLAST of Carg11742 vs. TAIR10
Match: AT2G20140.1 (AAA-type ATPase family protein)

HSP 1 Score: 367.1 bits (941), Expect = 1.5e-101
Identity = 171/320 (53.44%), Postives = 246/320 (76.88%), Query Frame = 0


Query: 82  IQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVD 141
           ++  P+ +G   E++D+N+ IV S+ G  YYV ILS ++++ L+P  S+ +H    ++V 
Sbjct: 105 LRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVG 164

Query: 142 VLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRG 201
           +L  E D  +S++   + P  +Y DIGG + Q QEI+EAVELPLTH ELY+ IGI PP+G
Sbjct: 165 ILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKG 224

Query: 202 VLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 261
           V+LYG PGTGKT+LAKAVAN T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284

Query: 262 IFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 321
           +FIDE+DA+ T R+DA +G +RE+QR ++ELLNQ+DGFD   +VKVI+ATNR ++LDPAL
Sbjct: 285 VFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPAL 344

Query: 322 LRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQE 381
           LRPGR+DRKIEFPLPD + +R +FQ+ T+KM L+++V+LE++V   D+ S A+I AIC E
Sbjct: 345 LRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTE 404

Query: 382 AGMHAVRKNRYVILPKDFEK 402
           AG+ A+R+ R  +   DF+K
Sbjct: 405 AGLLALRERRMKVTHVDFKK 424

[Close]

BLAST of Carg11742 vs. TAIR10
Match: AT1G53750.1 (regulatory particle triple-A 1A)

HSP 1 Score: 305.4 bits (781), Expect = 5.2e-83
Identity = 145/270 (53.70%), Postives = 194/270 (71.85%), Query Frame = 0


Query: 130 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHE 189
           V + R+   +   LPP+ D S+++++  EKPDVTYND+GGC  Q +++RE VELP+ H E
Sbjct: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192

Query: 190 LYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRD 249
            + ++GIDPP+GVL YGPPGTGKT+LA+AVAN T A FIRV+GSE VQKY+GEG RMVR+
Sbjct: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252

Query: 250 VFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM 309
           +F++A+     I+F DEVDAI  ARFD   G D EVQR ++E++NQ+DGFD   N+KV+M
Sbjct: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312

Query: 310 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDK 369
           ATNR DTLDPALLRPGRLDRK+EF LPD   +  +F++ T  MN   ++  E        
Sbjct: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPN 372

Query: 370 ISAAEIAAICQEAGMHAVRKNRYVILPKDF 400
            + A+I ++C EAGM+A+R  R  +  KDF
Sbjct: 373 STGADIRSVCTEAGMYAIRARRKTVTEKDF 402

[Close]

BLAST of Carg11742 vs. TAIR10
Match: AT5G20000.1 (AAA-type ATPase family protein)

HSP 1 Score: 302.4 bits (773), Expect = 4.4e-82
Identity = 157/326 (48.16%), Postives = 223/326 (68.40%), Query Frame = 0


Query: 89  IGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEAD 148
           +G+ ++++ +N  +V       Y V I  +I+   L PS  VAL   S  L  VLP + D
Sbjct: 85  VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVD 144

Query: 149 SSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPP 208
             ++L+   + PD TY+ IGG D Q +EI+E +ELP+ H EL++ +GI  P+GVLLYGPP
Sbjct: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204

Query: 209 GTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVD 268
           GTGKT+LA+AVA+HT   FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D
Sbjct: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264

Query: 269 AIATARFDAQTG-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRL 328
           +I +AR ++ +G  D EVQR ++ELLNQ+DGF+ +  +KV+MATNR D LD ALLRPGR+
Sbjct: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324

Query: 329 DRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAV 388
           DRKIEFP P+   +  + ++ + KMNL   +DL+    + +  S AE+ A+C EAGM A+
Sbjct: 325 DRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384

Query: 389 RKNRYVILPKDFEKGYRTNVKKPDTD 414
           R+ R  +  +DFE      V K DT+
Sbjct: 385 RERRVHVTQEDFEMAV-AKVMKKDTE 409

[Close]

BLAST of Carg11742 vs. Swiss-Prot
Match: sp|P85200|PRS6B_HELAN (26S proteasome regulatory subunit 6B homolog OS=Helianthus annuus OX=4232 PE=1 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 8.5e-200
Identity = 364/417 (87.29%), Postives = 373/417 (89.45%), Query Frame = 0


Query: 3   AAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSD-EDDLYSRLKSLQRQLEFIXXXXXXX 62
           AA MVLDPK S  PP + P+  +       QS+D EDDLY+RLK+L RQ+EFI       
Sbjct: 2   AATMVLDPKPSSTPPPTLPNPYT----TDSQSTDSEDDLYTRLKTLDRQIEFIDIQEEYV 61

Query: 63  XXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 122
                              RIQSVPLVIGQFMEM+DQNNGIVGSTTGSNYYVRILSTINR
Sbjct: 62  KDELKNLKREQLRSQEEVKRIQSVPLVIGQFMEMIDQNNGIVGSTTGSNYYVRILSTINR 121

Query: 123 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV 182
           ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV
Sbjct: 122 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV 181

Query: 183 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 242
           ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG
Sbjct: 182 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 241

Query: 243 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 302
           EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ
Sbjct: 242 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 301

Query: 303 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLE 362
           TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLE
Sbjct: 302 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLE 361

Query: 363 DYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           DYVSRPDKISAAEI AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDF+FYK
Sbjct: 362 DYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFDFYK 414

[Close]

BLAST of Carg11742 vs. Swiss-Prot
Match: sp|Q9SEI4|PRS6B_ARATH (26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 5.2e-197
Identity = 362/417 (86.81%), Postives = 372/417 (89.21%), Query Frame = 0


Query: 2   AAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXXX 61
           A A+MVLDPK+S       P++  DL      ++DE+DLY RLKSL+RQLEF        
Sbjct: 5   AVASMVLDPKAS-------PAL-MDL-----STADEEDLYGRLKSLERQLEFTDIQEEYV 64

Query: 62  XXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 121
                              RIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR
Sbjct: 65  KDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 124

Query: 122 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAV 181
           ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDV+YNDIGGCDIQKQEIREAV
Sbjct: 125 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAV 184

Query: 182 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 241
           ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG
Sbjct: 185 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 244

Query: 242 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 301
           EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ
Sbjct: 245 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQ 304

Query: 302 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLE 361
           TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCT+KMNLSDEVDLE
Sbjct: 305 TVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLE 364

Query: 362 DYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           DYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYR NVKKPDTDFEFYK
Sbjct: 365 DYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEFYK 408

[Close]

BLAST of Carg11742 vs. Swiss-Prot
Match: sp|P54778|PRS6B_SOLTU (26S proteasome regulatory subunit 6B homolog OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 6.7e-197
Identity = 360/416 (86.54%), Postives = 365/416 (87.74%), Query Frame = 0


Query: 3   AAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXXXX 62
           A AMVLDPK    P    P+ R +       S  EDDLY+RLKSLQRQLEFI        
Sbjct: 2   ATAMVLDPK----PAEKLPATRPETSITDVPSDGEDDLYARLKSLQRQLEFIEIQEEYVK 61

Query: 63  XXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRE 122
                             RIQSVPLVIGQFMEM+DQNN IVGSTTGSNYYVRILSTINRE
Sbjct: 62  DELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRE 121

Query: 123 LLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVE 182
           LLKPSASV L RHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVE
Sbjct: 122 LLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVE 181

Query: 183 LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGE 242
           LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGE
Sbjct: 182 LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGE 241

Query: 243 GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT 302
           GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT
Sbjct: 242 GPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQT 301

Query: 303 VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLED 362
           VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDLED
Sbjct: 302 VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLED 361

Query: 363 YVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           YVSRPDKISAAEI AICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 362 YVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 413

[Close]

BLAST of Carg11742 vs. Swiss-Prot
Match: sp|P46507|PRS6B_MANSE (26S proteasome regulatory subunit 6B OS=Manduca sexta OX=7130 PE=2 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 1.2e-169
Identity = 308/400 (77.00%), Postives = 345/400 (86.25%), Query Frame = 0


Query: 25  SDLQGL---AEQSSDE---DDLYSRLKSLQRQLEFIXXXXXXXXXXXXXXXXXXXXXXXX 84
           +D +GL     Q+ DE   +DLY++ K LQR LEF+              XXXX      
Sbjct: 16  TDAKGLPFAGPQTFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLXXXXLHAQEE 75

Query: 85  XXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNA 144
             RIQSVPLVIGQF+E VDQN GIVGSTTGSNYYVRILSTI+RELLKPSASVALH+HSNA
Sbjct: 76  VKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNA 135

Query: 145 LVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDP 204
           LVDVLPPEADSSIS+L   EKPDV Y+DIGG D QKQEIREAVELPLTH ELY+QIGI+P
Sbjct: 136 LVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEP 195

Query: 205 PRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 264
           PRGVL+YGPPG GKTMLA AVA+HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+
Sbjct: 196 PRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENS 255

Query: 265 PAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLD 324
           PAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQT NVKVIMATNRADTLD
Sbjct: 256 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 315

Query: 325 PALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAI 384
           PALLRPGRLDRKIEFPLPDRRQKRL+F   TAKMNLS+EVDLE++V+RPD++S A+I AI
Sbjct: 316 PALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAI 375

Query: 385 CQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           CQEAGM+AVR+NRY++LPKDFEKGY+ N+KK ++++EFYK
Sbjct: 376 CQEAGMNAVRENRYIVLPKDFEKGYKNNIKKDESEYEFYK 415

[Close]

BLAST of Carg11742 vs. Swiss-Prot
Match: sp|Q3T030|PRS6B_BOVIN (26S proteasome regulatory subunit 6B OS=Bos taurus OX=9913 GN=PSMC4 PE=2 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 2.9e-168
Identity = 306/413 (74.09%), Postives = 342/413 (82.81%), Query Frame = 0


Query: 7   VLDPKSSLEPPA-SFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXXXXXXX 66
           +L  K+  E PA S    ++ L  L  +  D +DLYSR K LQ++LEF+           
Sbjct: 6   ILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQ 65

Query: 67  XXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLK 126
                          RIQS+PLVIGQF+E VDQN  IVGSTTGSNYYVRILSTI+RELLK
Sbjct: 66  KNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLK 125

Query: 127 PSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPL 186
           P+ASVALH+HSNALVDVLPPEADSSI +L+  +KPDV Y DIGG DIQKQE+REAVELPL
Sbjct: 126 PNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPL 185

Query: 187 THHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPR 246
           TH ELYKQIGIDPPRGVL+YGPPG GKTMLAKAVA+HTTAAFIRVVGSEFVQKYLGEGPR
Sbjct: 186 THFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPR 245

Query: 247 MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV 306
           MVRDVFRLAKENAPAIIFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQ VNV
Sbjct: 246 MVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNV 305

Query: 307 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVS 366
           KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F   T+KMNLS+EVDLEDYV+
Sbjct: 306 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVA 365

Query: 367 RPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           RPDKIS A+I +ICQE+GM AVR+NRY++L KDFEK Y+T +KK + + EFYK
Sbjct: 366 RPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of Carg11742 vs. TrEMBL
Match: tr|A0A1S3C3H0|A0A1S3C3H0_CUCME (26S protease regulatory subunit 6B homolog OS=Cucumis melo OX=3656 GN=LOC103496251 PE=3 SV=1)

HSP 1 Score: 753.1 bits (1943), Expect = 3.4e-214
Identity = 416/418 (99.52%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60
           MAA+AMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX
Sbjct: 1   MAASAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Carg11742 vs. TrEMBL
Match: tr|A0A0A0KD39|A0A0A0KD39_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133730 PE=3 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 6.5e-213
Identity = 414/418 (99.04%), Postives = 415/418 (99.28%), Query Frame = 0


Query: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60
           MAA+AMVLDPKSSLEPPAS P MRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX
Sbjct: 1   MAASAMVLDPKSSLEPPASLPPMRSDLQGLAEQSSDEDDLYSRLKSLQRQLEFIXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120
           XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTIN 120

Query: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180
           RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA
Sbjct: 121 RELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREA 180

Query: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240
           VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL
Sbjct: 181 VELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYL 240

Query: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300
           GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD
Sbjct: 241 GEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFD 300

Query: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL 360
           QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVDL
Sbjct: 301 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDL 360

Query: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 418

[Close]

BLAST of Carg11742 vs. TrEMBL
Match: tr|A0A2P5ADP8|A0A2P5ADP8_9ROSA (26S proteasome subunit P OS=Trema orientalis OX=63057 GN=TorRG33x02_352830 PE=3 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 1.7e-208
Identity = 409/419 (97.61%), Postives = 411/419 (98.09%), Query Frame = 0


Query: 3   AAAMVLDPKSSLEPPASFPSMRSDLQ---GLAEQSSDEDDLYSRLKSLQRQLEFIXXXXX 62
           A+AMV+DPK SLEPPASFPS RSDLQ   G   QSSDEDDLYSRLKSLQRQLEFIXXXXX
Sbjct: 2   ASAMVMDPKPSLEPPASFPSTRSDLQIGLGDQHQSSDEDDLYSRLKSLQRQLEFIXXXXX 61

Query: 63  XXXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI 122
           XXXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI 121

Query: 123 NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIRE 182
           NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIRE
Sbjct: 122 NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIRE 181

Query: 183 AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY 242
           AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY
Sbjct: 182 AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY 241

Query: 243 LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF 302
           LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF
Sbjct: 242 LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF 301

Query: 303 DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD 362
           DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD
Sbjct: 302 DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD 361

Query: 363 LEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           LEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 362 LEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 420

[Close]

BLAST of Carg11742 vs. TrEMBL
Match: tr|A0A2P5DHX7|A0A2P5DHX7_PARAD (26S proteasome subunit P OS=Parasponia andersonii OX=3476 GN=PanWU01x14_063390 PE=3 SV=1)

HSP 1 Score: 729.9 bits (1883), Expect = 3.1e-207
Identity = 407/419 (97.14%), Postives = 409/419 (97.61%), Query Frame = 0


Query: 3   AAAMVLDPKSSLEPPASFPSMRSDLQ---GLAEQSSDEDDLYSRLKSLQRQLEFIXXXXX 62
           A+AMV+DPK SLEPPASFPS RSDLQ   G   QSSDEDDLYSRLKSLQRQLEF XXXXX
Sbjct: 2   ASAMVMDPKPSLEPPASFPSTRSDLQGGLGDQHQSSDEDDLYSRLKSLQRQLEFXXXXXX 61

Query: 63  XXXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI 122
           XXXXXXXXXXXXXXXXXXXXX IQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXXXIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI 121

Query: 123 NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIRE 182
           NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIRE
Sbjct: 122 NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIRE 181

Query: 183 AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY 242
           AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY
Sbjct: 182 AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY 241

Query: 243 LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF 302
           LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF
Sbjct: 242 LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF 301

Query: 303 DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD 362
           DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD
Sbjct: 302 DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD 361

Query: 363 LEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           LEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 362 LEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 420

[Close]

BLAST of Carg11742 vs. TrEMBL
Match: tr|A0A2I4FVL2|A0A2I4FVL2_9ROSI (26S protease regulatory subunit 6B homolog OS=Juglans regia OX=51240 GN=LOC109002408 PE=3 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 9.1e-207
Identity = 404/419 (96.42%), Postives = 409/419 (97.61%), Query Frame = 0


Query: 1   MAAAAMVLDPKSSLEPPASFPSMRSDLQ-GLAEQSSDEDDLYSRLKSLQRQLEFIXXXXX 60
           MAA+A+V+DPK S EPP SFPS RSDL  G  +QSSDEDDLYSRLKSLQRQ+EFIXXXXX
Sbjct: 1   MAASALVMDPKPSTEPPPSFPSTRSDLHGGWTDQSSDEDDLYSRLKSLQRQMEFIXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI 120
           XXXXXXXXXXXXXXXXXXXXX IQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTI 120

Query: 121 NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIRE 180
           NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIRE
Sbjct: 121 NRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIRE 180

Query: 181 AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY 240
           AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY
Sbjct: 181 AVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKY 240

Query: 241 LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF 300
           LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF
Sbjct: 241 LGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGF 300

Query: 301 DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVD 360
           DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNL DEVD
Sbjct: 301 DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVD 360

Query: 361 LEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419
           LEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
Sbjct: 361 LEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK 419

The following BLAST results are available for this feature:

BLAST of Carg11742 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947765.1	8.0e-215	100.00	26S proteasome regulatory subunit 6B homolog [Cucurbita moschata] >XP_023007178....	[more]
XP_008456254.1	5.2e-214	99.52	PREDICTED: 26S protease regulatory subunit 6B homolog [Cucumis melo]	[more]
XP_023533772.1	8.9e-214	99.52	26S proteasome regulatory subunit 6B homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022149692.1	5.8e-213	99.04	26S proteasome regulatory subunit 6B homolog [Momordica charantia]	[more]
XP_022944034.1	5.8e-213	98.80	26S proteasome regulatory subunit 6B homolog [Cucurbita moschata] >XP_022944035....	[more]

BLAST of Carg11742 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58290.1	2.9e-198	86.81	regulatory particle triple-A ATPase 3	[more]
AT4G29040.1	5.0e-102	53.75	regulatory particle AAA-ATPase 2A	[more]
AT2G20140.1	1.5e-101	53.44	AAA-type ATPase family protein	[more]
AT1G53750.1	5.2e-83	53.70	regulatory particle triple-A 1A	[more]
AT5G20000.1	4.4e-82	48.16	AAA-type ATPase family protein	[more]

BLAST of Carg11742 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P85200\|PRS6B_HELAN	8.5e-200	87.29	26S proteasome regulatory subunit 6B homolog OS=Helianthus annuus OX=4232 PE=1 S...	[more]
sp\|Q9SEI4\|PRS6B_ARATH	5.2e-197	86.81	26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|P54778\|PRS6B_SOLTU	6.7e-197	86.54	26S proteasome regulatory subunit 6B homolog OS=Solanum tuberosum OX=4113 PE=2 S...	[more]
sp\|P46507\|PRS6B_MANSE	1.2e-169	77.00	26S proteasome regulatory subunit 6B OS=Manduca sexta OX=7130 PE=2 SV=1	[more]
sp\|Q3T030\|PRS6B_BOVIN	2.9e-168	74.09	26S proteasome regulatory subunit 6B OS=Bos taurus OX=9913 GN=PSMC4 PE=2 SV=1	[more]

BLAST of Carg11742 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C3H0\|A0A1S3C3H0_CUCME	3.4e-214	99.52	26S protease regulatory subunit 6B homolog OS=Cucumis melo OX=3656 GN=LOC1034962...	[more]
tr\|A0A0A0KD39\|A0A0A0KD39_CUCSA	6.5e-213	99.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133730 PE=3 SV=1	[more]
tr\|A0A2P5ADP8\|A0A2P5ADP8_9ROSA	1.7e-208	97.61	26S proteasome subunit P OS=Trema orientalis OX=63057 GN=TorRG33x02_352830 PE=3 ...	[more]
tr\|A0A2P5DHX7\|A0A2P5DHX7_PARAD	3.1e-207	97.14	26S proteasome subunit P OS=Parasponia andersonii OX=3476 GN=PanWU01x14_063390 P...	[more]
tr\|A0A2I4FVL2\|A0A2I4FVL2_9ROSI	9.1e-207	96.42	26S protease regulatory subunit 6B homolog OS=Juglans regia OX=51240 GN=LOC10900...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0036402	proteasome-activating ATPase activity
GO:0016787	hydrolase activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0030163	protein catabolic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR003960	ATPase_AAA_CS
IPR035256	PSMC4
IPR005937	26S_Psome_P45-like
IPR003959	ATPase_AAA_core
IPR003593	AAA+_ATPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030163	protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0036402	proteasome-activating ATPase activity
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11742-RA	Carg11742-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	COILS	Coil	Coil	coord: 58..85
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 42..154 e-value: 2.6E-28 score: 100.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 155..335 e-value: 1.4E-69 score: 235.5
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 339..418 e-value: 4.2E-20 score: 73.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR23073	26S PROTEASE REGULATORY SUBUNIT	coord: 32..418
None	No IPR available	CDD	cd00009	AAA	coord: 168..335 e-value: 2.83864E-28 score: 107.617
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 198..337 e-value: 1.5E-23 score: 94.3
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 202..335 e-value: 2.9E-44 score: 150.6
IPR005937	26S proteasome regulatory subunit P45-like	TIGRFAM	TIGR01242	TIGR01242	coord: 47..401 e-value: 1.1E-134 score: 447.2
IPR035256	26S Proteasome regulatory subunit 6B	PANTHER	PTHR23073:SF8	26S PROTEASE REGULATORY SUBUNIT 6B	coord: 32..418
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 305..323
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 160..404

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11742	Cla013421	Watermelon (97103) v1	carwmB1061
Carg11742	Csa6G133730	Cucumber (Chinese Long) v2	carcuB1074
Carg11742	MELO3C019587	Melon (DHL92) v3.5.1	carmeB1024
Carg11742	ClCG02G019000	Watermelon (Charleston Gray)	carwcgB1032
Carg11742	CSPI06G10730	Wild cucumber (PI 183967)	carcpiB1097
Carg11742	Cucsa.118870	Cucumber (Gy14) v1	carcgyB1172
Carg11742	CmaCh02G006790	Cucurbita maxima (Rimu)	carcmaB1466
Carg11742	CmoCh02G006910	Cucurbita moschata (Rifu)	carcmoB1423
Carg11742	CmoCh20G003290	Cucurbita moschata (Rifu)	carcmoB1421
Carg11742	Lsi10G014880	Bottle gourd (USVL1VR-Ls)	carlsiB964
Carg11742	Cp4.1LG05g10100	Cucurbita pepo (Zucchini)	carcpeB1475
Carg11742	CsGy6G010840	Cucumber (Gy14) v2	carcgybB1043
Carg11742	MELO3C019587.2	Melon (DHL92) v3.6.1	carmedB1040
Carg11742	CsaV3_6G013170	Cucumber (Chinese Long) v3	carcucB1107
Carg11742	Cla97C02G044940	Watermelon (97103) v2	carwmbB1119
Carg11742	Bhi10G000698	Wax gourd	carwgoB1243

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11742	Carg03401	Silver-seed gourd	carcarB368

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11742	Cucurbita pepo (Zucchini)	carcpeB1473
Carg11742	Cucurbita pepo (Zucchini)	carcpeB1476
Carg11742	Wild cucumber (PI 183967)	carcpiB1099
Carg11742	Cucumber (Chinese Long) v2	carcuB1076
Carg11742	Cucumber (Chinese Long) v3	carcucB1108
Carg11742	Bottle gourd (USVL1VR-Ls)	carlsiB966
Carg11742	Melon (DHL92) v3.6.1	carmedB1036
Carg11742	Watermelon (Charleston Gray)	carwcgB1027
Carg11742	Watermelon (97103) v1	carwmB1057
Carg11742	Watermelon (97103) v2	carwmbB1114
Carg11742	Wax gourd	carwgoB1246
Carg11742	Silver-seed gourd	carcarB369
Carg11742	Cucumber (Gy14) v2	carcgybB1044
Carg11742	Cucumber (Gy14) v1	carcgyB1171
Carg11742	Cucurbita maxima (Rimu)	carcmaB1461
Carg11742	Cucurbita moschata (Rifu)	carcmoB1416
Carg11742	Cucurbita moschata (Rifu)	carcmoB1422