Carg11545 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAGCGATTACTGCGCATTTTTCGCCAAACAAATACACGTAGCTACAGGGTTTCTGAATTACAAAGCGATGGGTTGCTTTTTTGCTTGCTTTGGTTCATCCAAAGATCCCAAACGCCTCAAGAATTATCGCAAATCGCGGCATACAAACCACCGATCCACCATTCAGGTTAGCAATCTTCATCTTTCATTTGAAAATTTTCGACAAAACCCTAGAAAGTCGGCAAGAATTTTCTTCTTTATGACTATTTTCTCCTCGTTCGTTTATCGCAATGGAACTAATTTGGATGTTGCTTTGTTGCAGAGGAATGAGATCCCTAAACCCGGACAATCTTCTCTTCACACGTTGCCTGTTTACTCTAACAAAAAATCCTTGCATCCGGTTGAAGCTGGGTTAGTACTTCAAATTCGAAGTGTAACTTTTTTTTGTTTGTTTGTTAAATGATACAAAAATGAATGGAACTTTTTTTTGAAACCAAAGTTGGCATACTTTTGGGGTATGTTTTGATTTTGGTTTTTGGTTAGAAATGAGAATAATATGGCTTTTGATGATATGAATAGGCGTGATGGGTCATTGAACATCAGTACCACAGAGGAAGTAACTTCTGTGAAACCCCATGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCATGAGCATGAGCATGAGCATGAGCATGAGCATGAGCATGTTGTTTTATCCCAGGAAGATATTGCTTCAGTTCATGGGATGAATCAGGACCTGGAGGAAGACAGTGTGGAAAAATCAAGCAAACCTGAATCTTCATCTGAGGATTTTGTTGTTCCTCTCAATCCCAACTTCAAATCATCTTTCCCTCCAGTTCATCGATACAGGAACTGTAAGGATAGTGATGATGAGGACGACGTTTTTGAAAGTCATCTTGGTAGAGGTGAAAATGATGAATTTGGAATGGTTGAATCAATGAAGGAAAGTTCTTCTGTGGCTGATAGCTCGATGAATGTTAACCGGCTTAACCCCACAAACGTGAGGCATAGGACTGCTTATGTTTGTCCGGTACTGAAACCAGTTGAAAATCTCTCTCAATGGAATGCTGTGAAATCAAAGAGCGCATTGCCGTCAACACCTCAGAAAGAGAATATGGAGTTGGAACAAGAATCAACAGGCGAGGAGTTTCCATACAGTTCCAAGGCTAGTCAGGAACTGTGTGTTGATGCCAGCCTTTCTAACTGGTTGGCTTCATCAGAAGCAACACCAGCGAGTAAGATTACTGCAACAATGGCTTTAGAAGCCACTGTTACTCCAGTGAAAAGCAGCACGTTGCAAGGATCGAGCTCACAGAGCAGCAGCCACAGAGAGTTGCCTTTAGTTCGAACTGTTGGTACATATAGAAGGCAGGGAGCGAGTGATAAGGACCGTGATTCGGCCTCTTCGTTTAAAGGAATACCAAATACGACCAGCAAGTATAGAGAGGTATAAATTTGAAGTCGTAATTTATGATCTGTTTGGAATGACTTGTTAAACACATAAAATATTCTTCCAAACAGGCGCTTAGAAAGTGGAGGGACTGAAATAAGTTGTTCTTTTTTGTTTGTGGGTGCAGGATAAGACAGTGAATTGGCACTCTACACCATTTGAAACAAGGTTGGAGAGAGCTTTGAATAGTAGAGGGGTTGCTAAAGCTTGAAGCTGGTGGAGCTCTGTTATTTGAGTTTTTGAGAGGTAACAGAAAATTACCATTTCTTCTGTACAAACTAGAGCTTTGAACTCTGAACTCTGAAGCAGTTGCCAATTGTTTGATTTTCTTCTGTTTGGTTGTGTAAAGTCTGCTTATACTTGTTTGTTTGTAAATCAATTGTTCACTGTTTGTTTCTTCTTCTATTTGGTTGTGTGTAAAGCCATTGATTTGTTTGTAAATCAATTTGTCCACTGTTTGTTTTAACCTGCTGGACTGTATTCCTATAGCCTACAACAAGCTGCCACTTATGCTAACT TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAGCGATTACTGCGCATTTTTCGCCAAACAAATACACGTAGCTACAGGGTTTCTGAATTACAAAGCGATGGGTTGCTTTTTTGCTTGCTTTGGTTCATCCAAAGATCCCAAACGCCTCAAGAATTATCGCAAATCGCGGCATACAAACCACCGATCCACCATTCAGAGGAATGAGATCCCTAAACCCGGACAATCTTCTCTTCACACGTTGCCTGTTTACTCTAACAAAAAATCCTTGCATCCGGTTGAAGCTGGAAATGAGAATAATATGGCTTTTGATGATATGAATAGGCGTGATGGGTCATTGAACATCAGTACCACAGAGGAAGTAACTTCTGTGAAACCCCATGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCATGAGCATGAGCATGAGCATGAGCATGAGCATGAGCATGTTGTTTTATCCCAGGAAGATATTGCTTCAGTTCATGGGATGAATCAGGACCTGGAGGAAGACAGTGTGGAAAAATCAAGCAAACCTGAATCTTCATCTGAGGATTTTGTTGTTCCTCTCAATCCCAACTTCAAATCATCTTTCCCTCCAGTTCATCGATACAGGAACTGTAAGGATAGTGATGATGAGGACGACGTTTTTGAAAGTCATCTTGGTAGAGGTGAAAATGATGAATTTGGAATGGTTGAATCAATGAAGGAAAGTTCTTCTGTGGCTGATAGCTCGATGAATGTTAACCGGCTTAACCCCACAAACGTGAGGCATAGGACTGCTTATGTTTGTCCGGTACTGAAACCAGTTGAAAATCTCTCTCAATGGAATGCTGTGAAATCAAAGAGCGCATTGCCGTCAACACCTCAGAAAGAGAATATGGAGTTGGAACAAGAATCAACAGGCGAGGAGTTTCCATACAGTTCCAAGGCTAGTCAGGAACTGTGTGTTGATGCCAGCCTTTCTAACTGGTTGGCTTCATCAGAAGCAACACCAGCGAGTAAGATTACTGCAACAATGGCTTTAGAAGCCACTGTTACTCCAGTGAAAAGCAGCACGTTGCAAGGATCGAGCTCACAGAGCAGCAGCCACAGAGAGTTGCCTTTAGTTCGAACTGTTGGTACATATAGAAGGCAGGGAGCGAGTGATAAGGACCGTGATTCGGCCTCTTCGTTTAAAGGAATACCAAATACGACCAGCAAGTATAGAGAGGATAAGACAGTGAATTGGCACTCTACACCATTTGAAACAAGGTTGGAGAGAGCTTTGAATAGTAGAGGGGTTGCTAAAGCTTGAAGCTGGTGGAGCTCTGTTATTTGAGTTTTTGAGAGGTAACAGAAAATTACCATTTCTTCTGTACAAACTAGAGCTTTGAACTCTGAACTCTGAAGCAGTTGCCAATTGTTTGATTTTCTTCTGTTTGGTTGTGTAAAGTCTGCTTATACTTGTTTGTTTGTAAATCAATTGTTCACTGTTTGTTTCTTCTTCTATTTGGTTGTGTGTAAAGCCATTGATTTGTTTGTAAATCAATTTGTCCACTGTTTGTTTTAACCTGCTGGACTGTATTCCTATAGCCTACAACAAGCTGCCACTTATGCTAACT ATGGGTTGCTTTTTTGCTTGCTTTGGTTCATCCAAAGATCCCAAACGCCTCAAGAATTATCGCAAATCGCGGCATACAAACCACCGATCCACCATTCAGAGGAATGAGATCCCTAAACCCGGACAATCTTCTCTTCACACGTTGCCTGTTTACTCTAACAAAAAATCCTTGCATCCGGTTGAAGCTGGAAATGAGAATAATATGGCTTTTGATGATATGAATAGGCGTGATGGGTCATTGAACATCAGTACCACAGAGGAAGTAACTTCTGTGAAACCCCATGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCATGAGCATGAGCATGAGCATGAGCATGAGCATGAGCATGTTGTTTTATCCCAGGAAGATATTGCTTCAGTTCATGGGATGAATCAGGACCTGGAGGAAGACAGTGTGGAAAAATCAAGCAAACCTGAATCTTCATCTGAGGATTTTGTTGTTCCTCTCAATCCCAACTTCAAATCATCTTTCCCTCCAGTTCATCGATACAGGAACTGTAAGGATAGTGATGATGAGGACGACGTTTTTGAAAGTCATCTTGGTAGAGGTGAAAATGATGAATTTGGAATGGTTGAATCAATGAAGGAAAGTTCTTCTGTGGCTGATAGCTCGATGAATGTTAACCGGCTTAACCCCACAAACGTGAGGCATAGGACTGCTTATGTTTGTCCGGTACTGAAACCAGTTGAAAATCTCTCTCAATGGAATGCTGTGAAATCAAAGAGCGCATTGCCGTCAACACCTCAGAAAGAGAATATGGAGTTGGAACAAGAATCAACAGGCGAGGAGTTTCCATACAGTTCCAAGGCTAGTCAGGAACTGTGTGTTGATGCCAGCCTTTCTAACTGGTTGGCTTCATCAGAAGCAACACCAGCGAGTAAGATTACTGCAACAATGGCTTTAGAAGCCACTGTTACTCCAGTGAAAAGCAGCACGTTGCAAGGATCGAGCTCACAGAGCAGCAGCCACAGAGAGTTGCCTTTAGTTCGAACTGTTGGTACATATAGAAGGCAGGGAGCGAGTGATAAGGACCGTGATTCGGCCTCTTCGTTTAAAGGAATACCAAATACGACCAGCAAGTATAGAGAGGATAAGACAGTGAATTGGCACTCTACACCATTTGAAACAAGGTTGGAGAGAGCTTTGAATAGTAGAGGGGTTGCTAAAGCTTGA MGCFFACFGSSKDPKRLKNYRKSRHTNHRSTIQRNEIPKPGQSSLHTLPVYSNKKSLHPVEAGNENNMAFDDMNRRDGSLNISTTEEVTSVKPHEQEQEQEQEQEQEQEHEHEHEHEHEHEHVVLSQEDIASVHGMNQDLEEDSVEKSSKPESSSEDFVVPLNPNFKSSFPPVHRYRNCKDSDDEDDVFESHLGRGENDEFGMVESMKESSSVADSSMNVNRLNPTNVRHRTAYVCPVLKPVENLSQWNAVKSKSALPSTPQKENMELEQESTGEEFPYSSKASQELCVDASLSNWLASSEATPASKITATMALEATVTPVKSSTLQGSSSQSSSHRELPLVRTVGTYRRQGASDKDRDSASSFKGIPNTTSKYREDKTVNWHSTPFETRLERALNSRGVAKA
BLAST of Carg11545 vs. NCBI nr
Match: XP_022953628.1 (uncharacterized protein LOC111456104 isoform X1 [Cucurbita moschata]) HSP 1 Score: 664.1 bits (1712), Expect = 3.1e-187 Identity = 358/403 (88.83%), Postives = 364/403 (90.32%), Query Frame = 0
BLAST of Carg11545 vs. NCBI nr
Match: XP_022953629.1 (uncharacterized protein LOC111456104 isoform X2 [Cucurbita moschata]) HSP 1 Score: 657.9 bits (1696), Expect = 2.2e-185 Identity = 350/403 (86.85%), Postives = 356/403 (88.34%), Query Frame = 0
BLAST of Carg11545 vs. NCBI nr
Match: XP_022992017.1 (uncharacterized protein LOC111488494 [Cucurbita maxima]) HSP 1 Score: 642.5 bits (1656), Expect = 9.6e-181 Identity = 343/403 (85.11%), Postives = 355/403 (88.09%), Query Frame = 0
BLAST of Carg11545 vs. NCBI nr
Match: XP_023548184.1 (protein JASON-like [Cucurbita pepo subsp. pepo] >XP_023548185.1 protein JASON-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 622.9 bits (1605), Expect = 7.8e-175 Identity = 334/403 (82.88%), Postives = 344/403 (85.36%), Query Frame = 0
BLAST of Carg11545 vs. NCBI nr
Match: XP_011656777.1 (PREDICTED: uncharacterized protein LOC101205962 isoform X1 [Cucumis sativus] >KGN46381.1 hypothetical protein Csa_6G088090 [Cucumis sativus]) HSP 1 Score: 410.2 bits (1053), Expect = 8.0e-111 Identity = 249/406 (61.33%), Postives = 273/406 (67.24%), Query Frame = 0
BLAST of Carg11545 vs. TAIR10
Match: AT1G04030.1 (unknown protein) HSP 1 Score: 99.8 bits (247), Expect = 4.2e-21 Identity = 100/313 (31.95%), Postives = 138/313 (44.09%), Query Frame = 0
BLAST of Carg11545 vs. TAIR10
Match: AT1G06660.1 (unknown protein) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-07 Identity = 22/34 (64.71%), Postives = 30/34 (88.24%), Query Frame = 0
BLAST of Carg11545 vs. TAIR10
Match: AT5G44040.1 (unknown protein) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07 Identity = 63/233 (27.04%), Postives = 99/233 (42.49%), Query Frame = 0
BLAST of Carg11545 vs. TAIR10
Match: AT2G33400.1 (unknown protein) HSP 1 Score: 49.7 bits (117), Expect = 5.0e-06 Identity = 48/166 (28.92%), Postives = 72/166 (43.37%), Query Frame = 0
BLAST of Carg11545 vs. Swiss-Prot
Match: sp|F4IDQ5|JASON_ARATH (Protein JASON OS=Arabidopsis thaliana OX=3702 GN=JASON PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.1e-06 Identity = 22/34 (64.71%), Postives = 30/34 (88.24%), Query Frame = 0
BLAST of Carg11545 vs. TrEMBL
Match: tr|A0A0A0KF36|A0A0A0KF36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088090 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.3e-111 Identity = 249/406 (61.33%), Postives = 273/406 (67.24%), Query Frame = 0
BLAST of Carg11545 vs. TrEMBL
Match: tr|A0A1S3CCL7|A0A1S3CCL7_CUCME (uncharacterized protein LOC103498917 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498917 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 4.2e-108 Identity = 244/406 (60.10%), Postives = 270/406 (66.50%), Query Frame = 0
BLAST of Carg11545 vs. TrEMBL
Match: tr|A0A1S3CAX7|A0A1S3CAX7_CUCME (uncharacterized protein LOC103498917 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498917 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106 Identity = 240/406 (59.11%), Postives = 267/406 (65.76%), Query Frame = 0
BLAST of Carg11545 vs. TrEMBL
Match: tr|A0A2P2NZH6|A0A2P2NZH6_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 9.8e-41 Identity = 163/474 (34.39%), Postives = 224/474 (47.26%), Query Frame = 0
BLAST of Carg11545 vs. TrEMBL
Match: tr|B9GRF0|B9GRF0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G258500v3 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 8.3e-40 Identity = 162/479 (33.82%), Postives = 221/479 (46.14%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|