Carg11521 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11521
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein root UVB sensitive 2, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_083 : 394405 .. 399398 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCGGAGAAACAGATAAAACTTCCTTATTCGGCGGCAATTGTGGATTTCAACTCCGATTCTCGCGGCGGCGTTTTCATCTCTGGAACGAAGCGGTCATTAGGCAAATTGCGAGTCTTCGTCCATGGACTTCCTGGTACATTTCAATTTTATTATCATTCTAGTCCCTATCTTCTTCTGAATCTCCTCCACTGCGCAGAACAAGTTCAACGTGCGCAAGGACACAGAGAAATCGCCCTCTGGACCTGTTTCCTGGATTGAAATCTCTGAGTCTGTCTCACGCCGCTGCCAATTTCAACCCGATGGTCAACTTTCTGTGAGCTTCTGGTTTAGCTGACATTAACGTTTTCTGTGCTGTGTTTTAAATAACTAATGGTTTTTCGCTTTCTGGGCAATGGTTATTTCATTCCAAATTTTCATTCATTCTACTTTTCTTTCTGGAAATTCCGTGGTGCTCTTGCTTTTTTTAGTGTAAATGTGGGCTATCTTGGTAGCCGGATATGCTTAATGTTTAGTACCAATTTGGTTTGAGATTAAGAGAGAGTGAAAACTTGTTTTTCGAAGTAATGCCATGCTTCATAGTTTTATATGGAGTTGAAAGACAATCTGAGGTGTGAGGCGTTAGGCATGTTGTGATTTTCCACTTGTGCAATCATATGGTGCTGATCCACTTAAGCTACTACTATCAGTAATATGATTATGGAATGAATTACCATCAGAAGTTTATAGGATTAGTGGCTTGCCTTTGGTTATGCGGTTCATTGAGTAAACAGGCTTCAGTGTATCATAAAATTGAATGGCCAATAGAGTGTCGTGTGATATAATCTTATGATTCTCATTGCTGCTCTTTATGATGCAAATGGGCCAGTGTCAAATCATGATTTTGAAACCTAGGTAGATTTGGATTTATTAAGCAGCTAATAGTGAGCATGGGATTTAGATCAGAACAATTATCCAAAGAGAGACTCGACTTCTATACCGTTAAGCATCGGGGAAGAAAAAAAAATATTGCTCCCTTTGGTTTAGTTTGTGCACTTTACAAAAATACATATGAAAAGCATATCTCTCTGAACCTAAACTCTAAAACACATCTGTCGTAGAGTCTTCAATGTTCAAAAAGAACCCTTCTAAATGGTACCCTTATGATAACTAACTCACTGTTTCTACCTAACTAATGGTACCCACCCCCTTACACATGCTCTGACAAAAATTTCTCATAAACTCGAGTTTCTTTTACCATTGAATTGCTTTTTTAAAAGGAAAGAAAATGTGGTTAGAGAGGAACAATAGAATTTTTAAAGGGCAGAGAGATCTTTAGATGAGGTTTTGGAGGGAGGGAGGGGGGGGGGGGTCTAAACCCTGTTTGTGGGGGTTTGTTCGTCATACTTTTTGTAATTATCATCTTATTCTTCTTCTTTCAGATTTGAGCCCGTTCTTATAGGTTGTTGAGGGATTTTTGTAGGCTTGATATTTGTTGCCATTGTATATTCTTTCATTTTTTTTTTCAATGAAAGCTTAGTTTCTTATCCAAGGAAAGAAAAAGGAAATCCTCTTCAAAATGGTTGGATTAAAGTAGGTTGTTAAAACAGACCTAAGTGAAAGGAATTTGGAAGAGGAAAATACCTAAAAAGGTCAAACTCTTGCTTTGGGAAAATAGAATACGAGGAGTGATTGATGAAGGGAAATTATTTCGAAGTATACAACAATATTTCTGATTCAACCATGATCGTTTTGAAGTTAAAATTAGGAAATGGTTTTTTTTTTCCCAGTTGTGTAACCTTCAAATTGGATGCTAATATGAAAAAGGAAATTGATTTCTATAGGTGAAGATTATTGATGACTCGAGACCAGCAATTCAACGTGTTGTTGATTCCTTCCTCAGTACATTTTTTCCCTCAGGATATCCATACAGGTAAGCTGCATGATTTATTGTCACTAGTCAAAACAATTACACCAAGATTTGCATAATTCTCACCACCAATCAAGTAAGGTGGAGGACTGTTGTATTTATAATAAATTGAAAGAGTTATTGTGAGATTCCACCTCGGTTGGGGAGGAGAACGGAGCATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGGCGCATTTTAAAACCTTAAGGAAAAACCCAAAGAAGACAATGTTAGCGGTGGACTTGGTCTGATACAATTATAGCAGTAAATGAACAAGTGCCTTTTGTTAGCTACTTGATTATTGCCTGTCGTACCTGACAGTGTCAATGAAGGATATTTGAGGTATACACAATTTCGAGCATTGCAACATGTTACTAGTGCGGCTTTGTCAGTGCTGTCAACTCAGGTTTTTATCCAAATCTTTCCATCTTTGGTATTGCATTATGATTACATAATAATTCTTAACATTAGTAATATGATAATTACCTGTCAGCTTCAAATGATAGAATGGTGGTCATTGATATAAGTTCTTAATTCTGTTCAGTCACTGCTGTTTGCTGCAGGCTTGAGGCCAACAGCGGCACAGGCTACTGTTGTTAGTTGGGTAAGTTCAACAATTGTTTGTTATGGATCCGTATGCTTGGTGACATACTTCTCTCTTTCTTTTTTCTTCTTCTGTTCTTCAATTATTGATCAACTTTTTTTCCTTGTTTCTTAATAAATAATTTTATCCTTTTTCTTCCTGGAAGGTTTTAAAGGATGGGATGCAACATGTTGGCAAACTCATATGCAGCAATTTAGGTACAAGAATGGATTCAGAGCCCAAAAGGTGGAGAGTTATAGGTATGCATCTTTATGTCAATTTGTTATTCATTTTAAGATAGCATTTCCATACAGACATTATGTTGTTTTTTGGAGTCGCATCATGTGTGTGTGCACGTGTGTTTTTTTAAGTGACAAGTGACCCTCGCTTCTAAAAAACGATCGGATTTTATGCTGTAGCTGATGTCCTCTATGACTTTGGTGCTGGCTTGGAAGTTATTTCTCCCTTATGCCCTCATCTTTTTCTTCAAATGGCCGGCCTAGGCAACTTTGCAAAGGTTTAAGTTACTTCACTCATCAGCAAATTGTTTGAAGTATTATCCGTATTCGCCCGTTCTAGTTTCCGAGTTACAAGAATCTTCTTTATTTTTTGATTTTGAATTTCTATTCTGCTTTTTCTGGGGCTGGCTAGGGAATGGCTGTAGTTGCTGCAAGAGCAACAAGATTACCAATATATTCTTCATTTGCTAAAGAAGGCAATCTTAGTGACCTTTTTGCCAAAGGGGAAGCCATCTCCACTCTCTTCAATGTTGTTGGAATTGGAGCTGGGCTACAATTAGCGTCAACTATTTGTTCATCAATACAAGGAAAGGTAGGTTCCCTTGAATTTCCACTGTCAGTTGATTTCTTCCCTATGTTCTTATGCATTTTTCATTGTTATAAAAAGATACAAAAAATAAACTGGTGATAAATTTATTATTCAATGATTATCTAGTAGTATTACTCTGTTTTCTGCACTTTTTGGTAGGCTTATAGTAGACACTGATCCTGAACTCTAGGGGAATGGTATTTTTTGTGTTGAGGAAAACGACTGAATATGGACACGAGAAAATGTACAAATGTGAACTGATGGTGTTACGTAACGGGTTAAAGCGGACAATATTTACTAACGGTGGGCTTCGGCTGTTACAAATAGTATCAGAGCCAGATATCAAATGGCGTGTCAACGATGACGTTGGCCCCCAAGGGGGGTGGATTTTGAGATCCCATATCGGTTGGAGAGGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCGTGAGGCTGATGGCAATACGTAACGGGCTAAAACGGACAATATCTGTTAGCGGTGGGCTCGTTTGTTAACCTTTTTTATCTTGCTTATCATTTGTCTAAATCTGGTTCAAGCATGAGATACATTCGACTGGATGTGAGTACCTTCTTCAGTTGGTTTTAATTTCTATTCCTTGCAGTTAGTTGCAGCCCCTCTCCTTTCAATTGTACATGTCTATTGCGTTGTAGAGCAAATGCGAGCAACTCCAATAAACACATTGAATCCACAGAGGACGGCAATGATCGTTGCTGATTTCGTTAAGTCGGGAAGGATACCGAGTCCCGCTGACCTAAGGTACCATGAAGATCTTGTTTTTCCTGGAAGACTCATAGAGGATGCTGGAAGTGTAAAAGTAGGAAGGGCTTTACATGAGGTTATTAAGCCTTCAAAACTTGTTGAAATGAAACAAATGTTCCCCGAGGAGAAGTTTGTTTTGAACCAAACTCACAAATGGGTTGACATGGTGTTGGAGCATGATGCCTCAGGCGAGGATGCATTACGGGGATGGCTAGTAGCTGCATATACTGCAAACATAAAAGGGCCTTCTCATGAGCCAACTGCCAGCGTGTTGCTCGAGGCTTACGAAAAGATGAACGATGTGTTCACTCCGTTCGTATCTGAACTTCAGGCCAAAGGATGGCATACTGATCGTTTTCTCGACGGAGTGGGAACTCGTTTTGCATGGTAGTTCTCCATTCTCTATACTATCTTTAATCTTAGGTTCATATAGGTTTGTAGATCTTAGAACAGGCAATCATTTTCTCACGAGAAGTCGAGTTGTTTTGCTTGATAGTTCTTCATTTGTCGGACTACTTCGATTCATGCAGGTTTGTTGATATCAGAACTATATACTATATGAAGTAGAAATAGATCAAACGTTGTTACTTTTGTTAGAACAATGATGTGGGAGCTTTACAACACGTTCACAATTCAGTTAGATATTTGCGGAGTTGGTAGTACTAGCACGTTAATGTAAGCACGATGTCAAGCCAGCAAATAAGGACACAAGTTGATATGATATTAGAAGTGTTCTCTGATACGTGAAACTTCCATGATTTGAAATTTGGAGTTCTTTGAACGGGTGAATCCCTAAATCACAAACCGTAAACCCTCCATTTGAAATCAACTATTAAGCTTAGATTAGAACTCTGGAGG

mRNA sequence

ACTTCGGAGAAACAGATAAAACTTCCTTATTCGGCGGCAATTGTGGATTTCAACTCCGATTCTCGCGGCGGCGTTTTCATCTCTGGAACGAAGCGGTCATTAGGCAAATTGCGAGTCTTCGTCCATGGACTTCCTGAACAAGTTCAACGTGCGCAAGGACACAGAGAAATCGCCCTCTGGACCTGTTTCCTGGATTGAAATCTCTGAGTCTGTCTCACGCCGCTGCCAATTTCAACCCGATGGTCAACTTTCTGTGAAGATTATTGATGACTCGAGACCAGCAATTCAACGTGTTGTTGATTCCTTCCTCAGTACATTTTTTCCCTCAGGATATCCATACAGTGCGGCTTTGTCAGTGCTGTCAACTCAGTCACTGCTGTTTGCTGCAGGCTTGAGGCCAACAGCGGCACAGGCTACTGTTGTTAGTTGGGTTTTAAAGGATGGGATGCAACATGTTGGCAAACTCATATGCAGCAATTTAGGTACAAGAATGGATTCAGAGCCCAAAAGGTGGAGAGTTATAGCTGATGTCCTCTATGACTTTGGTGCTGGCTTGGAAGTTATTTCTCCCTTATGCCCTCATCTTTTTCTTCAAATGGCCGGCCTAGGCAACTTTGCAAAGGGAATGGCTGTAGTTGCTGCAAGAGCAACAAGATTACCAATATATTCTTCATTTGCTAAAGAAGGCAATCTTAGTGACCTTTTTGCCAAAGGGGAAGCCATCTCCACTCTCTTCAATGTTGTTGGAATTGGAGCTGGGCTACAATTAGCGTCAACTATTTGTTCATCAATACAAGGAAAGTTAGTTGCAGCCCCTCTCCTTTCAATTGTACATGTCTATTGCGTTGTAGAGCAAATGCGAGCAACTCCAATAAACACATTGAATCCACAGAGGACGGCAATGATCGTTGCTGATTTCGTTAAGTCGGGAAGGATACCGAGTCCCGCTGACCTAAGGTACCATGAAGATCTTGTTTTTCCTGGAAGACTCATAGAGGATGCTGGAAGTGTAAAAGTAGGAAGGGCTTTACATGAGGTTATTAAGCCTTCAAAACTTGTTGAAATGAAACAAATGTTCCCCGAGGAGAAGTTTGTTTTGAACCAAACTCACAAATGGGTTGACATGGTGTTGGAGCATGATGCCTCAGGCGAGGATGCATTACGGGGATGGCTAGTAGCTGCATATACTGCAAACATAAAAGGGCCTTCTCATGAGCCAACTGCCAGCGTGTTGCTCGAGGCTTACGAAAAGATGAACGATGTGTTCACTCCGTTCGTATCTGAACTTCAGGCCAAAGGATGGCATACTGATCGTTTTCTCGACGGAGTGGGAACTCGTTTTGCATGGTAGTTCTCCATTCTCTATACTATCTTTAATCTTAGGTTCATATAGGTTTGTAGATCTTAGAACAGGCAATCATTTTCTCACGAGAAGTCGAGTTGTTTTGCTTGATAGTTCTTCATTTGTCGGACTACTTCGATTCATGCAGGTTTGTTGATATCAGAACTATATACTATATGAAGTAGAAATAGATCAAACGTTGTTACTTTTGTTAGAACAATGATGTGGGAGCTTTACAACACGTTCACAATTCAGTTAGATATTTGCGGAGTTGGTAGTACTAGCACGTTAATGTAAGCACGATGTCAAGCCAGCAAATAAGGACACAAGTTGATATGATATTAGAAGTGTTCTCTGATACGTGAAACTTCCATGATTTGAAATTTGGAGTTCTTTGAACGGGTGAATCCCTAAATCACAAACCGTAAACCCTCCATTTGAAATCAACTATTAAGCTTAGATTAGAACTCTGGAGG

Coding sequence (CDS)

ATGGACTTCCTGAACAAGTTCAACGTGCGCAAGGACACAGAGAAATCGCCCTCTGGACCTGTTTCCTGGATTGAAATCTCTGAGTCTGTCTCACGCCGCTGCCAATTTCAACCCGATGGTCAACTTTCTGTGAAGATTATTGATGACTCGAGACCAGCAATTCAACGTGTTGTTGATTCCTTCCTCAGTACATTTTTTCCCTCAGGATATCCATACAGTGCGGCTTTGTCAGTGCTGTCAACTCAGTCACTGCTGTTTGCTGCAGGCTTGAGGCCAACAGCGGCACAGGCTACTGTTGTTAGTTGGGTTTTAAAGGATGGGATGCAACATGTTGGCAAACTCATATGCAGCAATTTAGGTACAAGAATGGATTCAGAGCCCAAAAGGTGGAGAGTTATAGCTGATGTCCTCTATGACTTTGGTGCTGGCTTGGAAGTTATTTCTCCCTTATGCCCTCATCTTTTTCTTCAAATGGCCGGCCTAGGCAACTTTGCAAAGGGAATGGCTGTAGTTGCTGCAAGAGCAACAAGATTACCAATATATTCTTCATTTGCTAAAGAAGGCAATCTTAGTGACCTTTTTGCCAAAGGGGAAGCCATCTCCACTCTCTTCAATGTTGTTGGAATTGGAGCTGGGCTACAATTAGCGTCAACTATTTGTTCATCAATACAAGGAAAGTTAGTTGCAGCCCCTCTCCTTTCAATTGTACATGTCTATTGCGTTGTAGAGCAAATGCGAGCAACTCCAATAAACACATTGAATCCACAGAGGACGGCAATGATCGTTGCTGATTTCGTTAAGTCGGGAAGGATACCGAGTCCCGCTGACCTAAGGTACCATGAAGATCTTGTTTTTCCTGGAAGACTCATAGAGGATGCTGGAAGTGTAAAAGTAGGAAGGGCTTTACATGAGGTTATTAAGCCTTCAAAACTTGTTGAAATGAAACAAATGTTCCCCGAGGAGAAGTTTGTTTTGAACCAAACTCACAAATGGGTTGACATGGTGTTGGAGCATGATGCCTCAGGCGAGGATGCATTACGGGGATGGCTAGTAGCTGCATATACTGCAAACATAAAAGGGCCTTCTCATGAGCCAACTGCCAGCGTGTTGCTCGAGGCTTACGAAAAGATGAACGATGTGTTCACTCCGTTCGTATCTGAACTTCAGGCCAAAGGATGGCATACTGATCGTTTTCTCGACGGAGTGGGAACTCGTTTTGCATGGTAG

Protein sequence

MDFLNKFNVRKDTEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDSFLSTFFPSGYPYSAALSVLSTQSLLFAAGLRPTAAQATVVSWVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHEDLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDASGEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDGVGTRFAW

Homology

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BLAST of Carg11521 vs. NCBI nr
Match: XP_023547688.1 (protein root UVB sensitive 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 801.6 bits (2069), Expect = 1.2e-228
Identity = 406/427 (95.08%), Postives = 407/427 (95.32%), Query Frame = 0


Query: 1   MDFLNKFNVRKDTEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDS 60
           MDFLNKFNVRKD EKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDS
Sbjct: 1   MDFLNKFNVRKDAEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDS 60

Query: 61  FLSTFFPSGYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATVVS 120
           FL+TFFPSGYPY                   SAALSVLSTQSLLFAAGLRPTAAQATVVS
Sbjct: 61  FLNTFFPSGYPYSVNEGYLRYTQFRALQHVTSAALSVLSTQSLLFAAGLRPTAAQATVVS 120

Query: 121 WVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGL 180
           WVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGL
Sbjct: 121 WVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGL 180

Query: 181 GNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICS 240
           GNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICS
Sbjct: 181 GNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICS 240

Query: 241 SIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHE 300
           SIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHE
Sbjct: 241 SIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHE 300

Query: 301 DLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDAS 360
           DLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDAS
Sbjct: 301 DLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDAS 360

Query: 361 GEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDG 409
           GEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDG
Sbjct: 361 GEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDG 420

[Close]

BLAST of Carg11521 vs. NCBI nr
Match: XP_022953234.1 (protein root UVB sensitive 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 800.0 bits (2065), Expect = 3.6e-228
Identity = 405/427 (94.85%), Postives = 407/427 (95.32%), Query Frame = 0


Query: 1   MDFLNKFNVRKDTEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDS 60
           MDFLNKFNVRKD EKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDS
Sbjct: 1   MDFLNKFNVRKDAEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDS 60

Query: 61  FLSTFFPSGYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATVVS 120
           FLSTFFPSGYPY                   SAALSVLSTQSLLFAAGLRPTAAQATVVS
Sbjct: 61  FLSTFFPSGYPYSVNEGYLRYTQFRALQHVTSAALSVLSTQSLLFAAGLRPTAAQATVVS 120

Query: 121 WVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGL 180
           WVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGL
Sbjct: 121 WVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGL 180

Query: 181 GNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICS 240
           GNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICS
Sbjct: 181 GNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICS 240

Query: 241 SIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHE 300
           SIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHE
Sbjct: 241 SIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHE 300

Query: 301 DLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDAS 360
           DLVFPGRLIEDAGSVKVGRALHEVIKPS+LVEMKQMFPEEKFVLNQTHKWVDMVLEHDAS
Sbjct: 301 DLVFPGRLIEDAGSVKVGRALHEVIKPSRLVEMKQMFPEEKFVLNQTHKWVDMVLEHDAS 360

Query: 361 GEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDG 409
           GEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDG
Sbjct: 361 GEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDG 420

[Close]

BLAST of Carg11521 vs. NCBI nr
Match: XP_022991969.1 (protein root UVB sensitive 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 798.9 bits (2062), Expect = 8.1e-228
Identity = 404/427 (94.61%), Postives = 407/427 (95.32%), Query Frame = 0


Query: 1   MDFLNKFNVRKDTEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDS 60
           MDFLNKFNVRKDTEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDS
Sbjct: 1   MDFLNKFNVRKDTEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDS 60

Query: 61  FLSTFFPSGYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATVVS 120
           FL+TFFPSGYPY                   SAALSVLSTQSLLFAAGLRPTAAQATVVS
Sbjct: 61  FLNTFFPSGYPYSVNEGYLRYTQFRALQHVTSAALSVLSTQSLLFAAGLRPTAAQATVVS 120

Query: 121 WVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGL 180
           WVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGL
Sbjct: 121 WVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGL 180

Query: 181 GNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICS 240
           GNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICS
Sbjct: 181 GNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICS 240

Query: 241 SIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHE 300
           SIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHE
Sbjct: 241 SIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHE 300

Query: 301 DLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDAS 360
           DLVFPGRLIEDAGSVKVGRALHE IKPSKLVEMKQMFPEEKFVLNQ+HKWVDMVLEHDAS
Sbjct: 301 DLVFPGRLIEDAGSVKVGRALHEAIKPSKLVEMKQMFPEEKFVLNQSHKWVDMVLEHDAS 360

Query: 361 GEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDG 409
           GEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDG
Sbjct: 361 GEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDG 420

[Close]

BLAST of Carg11521 vs. NCBI nr
Match: XP_008451249.1 (PREDICTED: protein root UVB sensitive 2, chloroplastic [Cucumis melo])

HSP 1 Score: 756.9 bits (1953), Expect = 3.5e-215
Identity = 383/428 (89.49%), Postives = 395/428 (92.29%), Query Frame = 0


Query: 1   MDFLNKFNVR-KDTEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVD 60
           MD LNKFN R KD  KSPS PVSWIE+S+SVSRRCQFQPDG LSVKIIDDSRPAIQR+VD
Sbjct: 1   MDLLNKFNARKKDPVKSPSLPVSWIEVSDSVSRRCQFQPDGHLSVKIIDDSRPAIQRIVD 60

Query: 61  SFLSTFFPSGYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATVV 120
           SFL+TFFPSGYPY                   SAALSVLSTQSLLFAAGLRPTAAQATVV
Sbjct: 61  SFLNTFFPSGYPYSVNEGYLRYTQFRALQHVTSAALSVLSTQSLLFAAGLRPTAAQATVV 120

Query: 121 SWVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAG 180
           SWVLKDGMQHVGKLICSNLG RMDSEPKRWRVIADVLYD GAGLEVISPLCPHLFL+MAG
Sbjct: 121 SWVLKDGMQHVGKLICSNLGARMDSEPKRWRVIADVLYDLGAGLEVISPLCPHLFLEMAG 180

Query: 181 LGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTIC 240
           LGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTIC
Sbjct: 181 LGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTIC 240

Query: 241 SSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYH 300
           SSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPAD+RY 
Sbjct: 241 SSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADIRYQ 300

Query: 301 EDLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDA 360
           EDLVFPGRLIE+AG+VKVGRALHEVIKPSKLVEMKQ+FPEEKFVLNQ+ KWVDMVLEHDA
Sbjct: 301 EDLVFPGRLIEEAGNVKVGRALHEVIKPSKLVEMKQIFPEEKFVLNQSQKWVDMVLEHDA 360

Query: 361 SGEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLD 409
           SGEDALRGWLVAAYTANIKGPSHEPTAS LLEAYEKMNDVFTPF+SELQ KGWHTDRFLD
Sbjct: 361 SGEDALRGWLVAAYTANIKGPSHEPTASALLEAYEKMNDVFTPFLSELQGKGWHTDRFLD 420

[Close]

BLAST of Carg11521 vs. NCBI nr
Match: XP_004148953.1 (PREDICTED: protein root UVB sensitive 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 749.6 bits (1934), Expect = 5.6e-213
Identity = 380/428 (88.79%), Postives = 395/428 (92.29%), Query Frame = 0


Query: 1   MDFLNKFNVR-KDTEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVD 60
           MD LNKF+ R KD EKSPS PVSWIE+S+SVSRRCQFQPDG LSVKIIDDSRPAIQR+VD
Sbjct: 1   MDLLNKFSARNKDPEKSPSLPVSWIEVSDSVSRRCQFQPDGHLSVKIIDDSRPAIQRIVD 60

Query: 61  SFLSTFFPSGYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATVV 120
           SFL+TFFPSGYPY                   SAALSVLSTQSLLFAAGLRPTAAQATVV
Sbjct: 61  SFLNTFFPSGYPYSVSEGYLRYTQFRALQHVTSAALSVLSTQSLLFAAGLRPTAAQATVV 120

Query: 121 SWVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAG 180
           SWVLKDGMQHVGKLICSNLG RMDSEPKRWRVIADVLYD GAGLEVISPLCPHLFL+MAG
Sbjct: 121 SWVLKDGMQHVGKLICSNLGARMDSEPKRWRVIADVLYDLGAGLEVISPLCPHLFLEMAG 180

Query: 181 LGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTIC 240
           LGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTIC
Sbjct: 181 LGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTIC 240

Query: 241 SSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYH 300
           SSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVK+GRIPSPAD+RY 
Sbjct: 241 SSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKAGRIPSPADIRYQ 300

Query: 301 EDLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDA 360
           EDLVFPGRLIE+AG+VKVGRALHEVIKPSKLVEMKQ+FP EKFVLNQ+ KWVDMVLEHDA
Sbjct: 301 EDLVFPGRLIEEAGNVKVGRALHEVIKPSKLVEMKQIFPGEKFVLNQSKKWVDMVLEHDA 360

Query: 361 SGEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLD 409
           SGEDALRGWLVAAYT NIK PSHEPTASVLLEAYEKMNDVFTPF+SELQAKGW+TDRFLD
Sbjct: 361 SGEDALRGWLVAAYTTNIKEPSHEPTASVLLEAYEKMNDVFTPFLSELQAKGWYTDRFLD 420

[Close]

BLAST of Carg11521 vs. TAIR10
Match: AT2G31190.1 (Protein of unknown function, DUF647)

HSP 1 Score: 601.7 bits (1550), Expect = 3.4e-172
Identity = 294/414 (71.01%), Postives = 345/414 (83.33%), Query Frame = 0


Query: 15  KSPSG-PVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDSFLSTFFPSGYPY- 74
           KSP   PV W E S+SVS R QFQ DG LS+K++DD+RP  Q++V+SFL+ FFPSGYPY 
Sbjct: 20  KSPEDFPVYWFETSDSVSHRYQFQSDGHLSMKVVDDARPVPQKMVESFLNKFFPSGYPYS 79

Query: 75  ------------------SAALSVLSTQSLLFAAGLRPTAAQATVVSWVLKDGMQHVGKL 134
                             SAALSVLSTQSLLFAAGLRPT AQATVVSW+LKDGMQHVGKL
Sbjct: 80  VNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQATVVSWILKDGMQHVGKL 139

Query: 135 ICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAAR 194
           ICSNLG RMDSEPKRWR++ADVLYD G GLE++SPLCPHLFL+MAGLGNFAKGMA VAAR
Sbjct: 140 ICSNLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEMAGLGNFAKGMATVAAR 199

Query: 195 ATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLS 254
           ATRLPIYSSFAKEGNLSD+FAKGEAISTLFNV GIGAG+QLASTICSS++GKLV   +LS
Sbjct: 200 ATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLASTICSSMEGKLVVGSILS 259

Query: 255 IVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHEDLVFPGRLIEDAG 314
           +VHVY VVEQMR  PINTLNPQRTA+IVA+F+K+G++PSP DLR+ EDL+FP R I+DAG
Sbjct: 260 VVHVYSVVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPDLRFQEDLMFPERPIQDAG 319

Query: 315 SVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDASGEDALRGWLVAAY 374
           +VKVGRALH+ +KPS++  +KQ+F EEKF+L+    W DMVLEHDA+GEDALRGWLVAAY
Sbjct: 320 NVKVGRALHKAVKPSEVQRLKQVFVEEKFLLSHGKSWTDMVLEHDATGEDALRGWLVAAY 379

Query: 375 TANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDGVGTRFAW 409
             ++    ++P   +L +AY+KMNDVF PF+S++QAKGW+TDRFLDG GTRFAW
Sbjct: 380 VKSMTKIYNDPDDIILQDAYDKMNDVFNPFLSQVQAKGWYTDRFLDGTGTRFAW 433

[Close]

BLAST of Carg11521 vs. TAIR10
Match: AT5G49820.1 (Protein of unknown function, DUF647)

HSP 1 Score: 146.4 bits (368), Expect = 4.0e-35
Identity = 93/324 (28.70%), Postives = 171/324 (52.78%), Query Frame = 0


Query: 72  YSAALSVLSTQSLLFAAGL--RPTAAQATVVSWVLKDGMQHVGKLICSNLGTRMDSEPKR 131
           +  A+ V +TQ+LL + G     +A+ A  ++W+LKDG   VGK++ +  G + D + K+
Sbjct: 138 FGGAMGVFTTQTLLNSVGASRNSSASAAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQ 197

Query: 132 WRVIADVLYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGN 191
            R   D+L + GAG+E+ +   PHLFL +A   N  K +A V + +TR PIY +FAK  N
Sbjct: 198 LRFAGDLLMELGAGVELATAAVPHLFLPLACAANVVKNVAAVTSTSTRTPIYKAFAKGEN 257

Query: 192 LSDLFAKGEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLSIVHVYCVVEQMRATP 251
           + D+ AKGE +  + +++G G  + ++    S +        LLS  ++    +++R+  
Sbjct: 258 IGDVTAKGECVGNIADLMGTGFSILISKRNPSLV----TTFGLLSCGYLMSSYQEVRSVV 317

Query: 252 INTLNPQRTAMIVADFVKSGRIPSPADLRYHEDLVFPGRLIEDAGSVKVGRALHEVIKPS 311
           ++TLN  R  + V  F+K+GR+PS  +    E  +F    ++D   +   R       PS
Sbjct: 318 LHTLNRARFTVAVESFLKTGRVPSLQEGNIQEK-IFTFPWVDDRPVMLGARFKDAFQDPS 377

Query: 312 KLVEMKQMFPEEKFVL--NQTHKWVDMVLEHDASGEDALRGWLVAAYTANIKGPSHEPTA 371
             + +K  F +E++++  + T   V  +L+H A+ +D L+    AA+ A++       + 
Sbjct: 378 TYMAVKPFFDKERYMVTYSPTKGKVYALLKHQANSDDILK----AAFHAHVLLHFMNQSK 437

Query: 372 SVLLEAYEKMNDVFTPFVSELQAK 392
                + E+++  F P   EL+++
Sbjct: 438 DGNPRSVEQLDPAFAPTEYELESR 452

[Close]

BLAST of Carg11521 vs. TAIR10
Match: AT3G45890.1 (Protein of unknown function, DUF647)

HSP 1 Score: 126.3 bits (316), Expect = 4.2e-29
Identity = 68/210 (32.38%), Postives = 119/210 (56.67%), Query Frame = 0


Query: 78  VLSTQSLLFAAGL-RPTAAQATVVSWVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADV 137
           VL+TQSLL+A GL +     A  ++WVLKDG+ ++ K++ S  G   D  PK WR+ AD+
Sbjct: 230 VLATQSLLYAVGLGKGAIPTAAAINWVLKDGIGYLSKIMLSKYGRHFDVHPKGWRLFADL 289

Query: 138 LYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAK 197
           L +   G+E+++P+ P  F+ +       +  A +   ATR    + FA + N +++ AK
Sbjct: 290 LENAAFGMEMLTPVFPQFFVMIGAAAGAGRSAAALIQAATRSCFNAGFASQRNFAEVIAK 349

Query: 198 GEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQ 257
           GEA   +   VGI  G+ +A+ I +S    L A  +++ +H+Y  ++  +   + TLNP 
Sbjct: 350 GEAQGMVSKSVGILLGIVVANCIGTSTSLALAAFGVVTTIHMYTNLKSYQCIQLRTLNPY 409

Query: 258 RTAMIVADFVKSGRIPSPADLRYHEDLVFP 287
           R +++ ++++ SG+ P   ++   E L FP
Sbjct: 410 RASLVFSEYLISGQAPLIKEVNDEEPL-FP 438

[Close]

BLAST of Carg11521 vs. TAIR10
Match: AT1G13770.1 (Protein of unknown function, DUF647)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-27
Identity = 96/394 (24.37%), Postives = 183/394 (46.45%), Query Frame = 0


Query: 46  IIDDSRPAIQRVVDSF-------LSTFFPSGYPYSA-------------------ALSVL 105
           I   S  +IQR  + F       L  F P G+P S                       +L
Sbjct: 31  ITASSSLSIQRSANRFNHVWRRVLQAFVPEGFPGSVTPDYVGFQLWDTLQGLSTYTKMML 90

Query: 106 STQSLLFAAGLRPTAAQ--ATVVSWVLKDGMQHVGKLICS-NLGTRMDSEPKRWRVIADV 165
           STQ+LL A G+   +A        W L+D    +G ++ +   G+ +DS  K WR++AD+
Sbjct: 91  STQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVADL 150

Query: 166 LYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAK 225
           + D G  ++++SPL P  F+ +  LG+ ++    VA+ ATR  +   FA + N +D+ AK
Sbjct: 151 MNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATRAALTQHFALQDNAADISAK 210

Query: 226 GEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQ 285
             +  T+  ++G+  G+ LA     +     ++   L++ H+Y     +R   +N+LN +
Sbjct: 211 EGSQETMATMMGMSLGMLLARFTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFE 270

Query: 286 RTAMIVADFVKSGRIPSPADLRYHED-LVFPGRLIEDAGSVKVGRALHEVIKPSKL--VE 345
           R+++++  F+++G++ SP  +   E  L      +    S  + + +   ++ S L  ++
Sbjct: 271 RSSILLTHFIQTGQVLSPEQVSSMEGVLPLWATSLRSTNSKPLHKRVQLGVRVSSLPRLD 330

Query: 346 MKQM--------FPEEKFVLNQTHKWVDMVLEHDASGEDALRGWLVAAYTANIKGPSHEP 400
           M Q+        +   K++L      V ++L  D+   D L+ ++ A   AN+     E 
Sbjct: 331 MLQLLNGVGASSYKNAKYLLAHIKGNVSVILHKDSKPADVLKSYIHAIVLANLM----EK 390

[Close]

BLAST of Carg11521 vs. TAIR10
Match: AT5G01510.1 (Protein of unknown function, DUF647)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-23
Identity = 95/371 (25.61%), Postives = 168/371 (45.28%), Query Frame = 0


Query: 66  FPSGYPYSAA-------------------LSVLSTQSLLFAAGLRPTAAQA--------- 125
           FPSG+P S +                    +VL T SLL A G+   +  +         
Sbjct: 120 FPSGFPGSVSDDYLDYMLWQFPTNITGWICNVLVTSSLLKAVGVGSFSGTSXXXXXXXXX 179

Query: 126 TVVSWVLKDGMQHVGK-LICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFL 185
             + WV KDG+  +G+ LI    G+  D +PK+WR+ AD +   G+  ++ + L P  FL
Sbjct: 180 XXIRWVSKDGIGALGRLLIGGRFGSLFDDDPKQWRMYADFIGSAGSFFDLATQLYPSQFL 239

Query: 186 QMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLA 245
            +A  GN AK +A      +   I + FA  GNL ++ AK E       ++G+G G+ + 
Sbjct: 240 LLASTGNLAKAVARGLRDPSFRVIQNHFAISGNLGEVAAKEEVWEVAAQLIGLGFGILII 299

Query: 246 ST--ICSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSP 305
            T  +  S    L+    + +VH++   + +     NT+N +R  +IV   V    +P  
Sbjct: 300 DTPGLVKSFPFVLLTWTSIRLVHLWLRYQSLAVLQFNTVNLKRARIIVESHVVHSVVPGY 359

Query: 306 ADLRYHEDLVFPGRLIEDAGSVKVGRALHEVI----KPSKLVEMKQMFPEEKFV--LNQT 365
            D    E+++   R ++    +  G +L E+       SK+  + +M+ +EK++  LN+ 
Sbjct: 360 VDCNKRENILLWQRFMKP--RIIFGVSLEELSGLEKSVSKVKALLKMYTKEKYILTLNKL 419

Query: 366 HKWVDMVLEH--DASGEDALRGWLVAAYTANIKGPSHEPTASV---LLEAYEKMNDVFTP 395
           +K  +  +    +A+  D LR    A +       S +   SV   L ++  +M++ F  
Sbjct: 420 NKDTEFSVSFKVNATSRDVLRCLWQAYWLEENMEESFKDKDSVFHWLKQSLSEMDNKFDD 479

[Close]

BLAST of Carg11521 vs. Swiss-Prot
Match: sp|Q9SJX7|RUS2_ARATH (Protein root UVB sensitive 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RUS2 PE=1 SV=2)

HSP 1 Score: 601.7 bits (1550), Expect = 6.2e-171
Identity = 294/414 (71.01%), Postives = 345/414 (83.33%), Query Frame = 0


Query: 15  KSPSG-PVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDSFLSTFFPSGYPY- 74
           KSP   PV W E S+SVS R QFQ DG LS+K++DD+RP  Q++V+SFL+ FFPSGYPY 
Sbjct: 20  KSPEDFPVYWFETSDSVSHRYQFQSDGHLSMKVVDDARPVPQKMVESFLNKFFPSGYPYS 79

Query: 75  ------------------SAALSVLSTQSLLFAAGLRPTAAQATVVSWVLKDGMQHVGKL 134
                             SAALSVLSTQSLLFAAGLRPT AQATVVSW+LKDGMQHVGKL
Sbjct: 80  VNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQATVVSWILKDGMQHVGKL 139

Query: 135 ICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAAR 194
           ICSNLG RMDSEPKRWR++ADVLYD G GLE++SPLCPHLFL+MAGLGNFAKGMA VAAR
Sbjct: 140 ICSNLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEMAGLGNFAKGMATVAAR 199

Query: 195 ATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLS 254
           ATRLPIYSSFAKEGNLSD+FAKGEAISTLFNV GIGAG+QLASTICSS++GKLV   +LS
Sbjct: 200 ATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLASTICSSMEGKLVVGSILS 259

Query: 255 IVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHEDLVFPGRLIEDAG 314
           +VHVY VVEQMR  PINTLNPQRTA+IVA+F+K+G++PSP DLR+ EDL+FP R I+DAG
Sbjct: 260 VVHVYSVVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPDLRFQEDLMFPERPIQDAG 319

Query: 315 SVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDASGEDALRGWLVAAY 374
           +VKVGRALH+ +KPS++  +KQ+F EEKF+L+    W DMVLEHDA+GEDALRGWLVAAY
Sbjct: 320 NVKVGRALHKAVKPSEVQRLKQVFVEEKFLLSHGKSWTDMVLEHDATGEDALRGWLVAAY 379

Query: 375 TANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDGVGTRFAW 409
             ++    ++P   +L +AY+KMNDVF PF+S++QAKGW+TDRFLDG GTRFAW
Sbjct: 380 VKSMTKIYNDPDDIILQDAYDKMNDVFNPFLSQVQAKGWYTDRFLDGTGTRFAW 433

[Close]

BLAST of Carg11521 vs. Swiss-Prot
Match: sp|Q93YU2|RUS6_ARATH (Protein root UVB sensitive 6 OS=Arabidopsis thaliana OX=3702 GN=RUS6 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.1e-34
Identity = 93/324 (28.70%), Postives = 171/324 (52.78%), Query Frame = 0


Query: 72  YSAALSVLSTQSLLFAAGL--RPTAAQATVVSWVLKDGMQHVGKLICSNLGTRMDSEPKR 131
           +  A+ V +TQ+LL + G     +A+ A  ++W+LKDG   VGK++ +  G + D + K+
Sbjct: 138 FGGAMGVFTTQTLLNSVGASRNSSASAAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQ 197

Query: 132 WRVIADVLYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGN 191
            R   D+L + GAG+E+ +   PHLFL +A   N  K +A V + +TR PIY +FAK  N
Sbjct: 198 LRFAGDLLMELGAGVELATAAVPHLFLPLACAANVVKNVAAVTSTSTRTPIYKAFAKGEN 257

Query: 192 LSDLFAKGEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLSIVHVYCVVEQMRATP 251
           + D+ AKGE +  + +++G G  + ++    S +        LLS  ++    +++R+  
Sbjct: 258 IGDVTAKGECVGNIADLMGTGFSILISKRNPSLV----TTFGLLSCGYLMSSYQEVRSVV 317

Query: 252 INTLNPQRTAMIVADFVKSGRIPSPADLRYHEDLVFPGRLIEDAGSVKVGRALHEVIKPS 311
           ++TLN  R  + V  F+K+GR+PS  +    E  +F    ++D   +   R       PS
Sbjct: 318 LHTLNRARFTVAVESFLKTGRVPSLQEGNIQEK-IFTFPWVDDRPVMLGARFKDAFQDPS 377

Query: 312 KLVEMKQMFPEEKFVL--NQTHKWVDMVLEHDASGEDALRGWLVAAYTANIKGPSHEPTA 371
             + +K  F +E++++  + T   V  +L+H A+ +D L+    AA+ A++       + 
Sbjct: 378 TYMAVKPFFDKERYMVTYSPTKGKVYALLKHQANSDDILK----AAFHAHVLLHFMNQSK 437

Query: 372 SVLLEAYEKMNDVFTPFVSELQAK 392
                + E+++  F P   EL+++
Sbjct: 438 DGNPRSVEQLDPAFAPTEYELESR 452

[Close]

BLAST of Carg11521 vs. Swiss-Prot
Match: sp|Q7X6P3|RUS1_ARATH (Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RUS1 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 7.6e-28
Identity = 68/210 (32.38%), Postives = 119/210 (56.67%), Query Frame = 0


Query: 78  VLSTQSLLFAAGL-RPTAAQATVVSWVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADV 137
           VL+TQSLL+A GL +     A  ++WVLKDG+ ++ K++ S  G   D  PK WR+ AD+
Sbjct: 230 VLATQSLLYAVGLGKGAIPTAAAINWVLKDGIGYLSKIMLSKYGRHFDVHPKGWRLFADL 289

Query: 138 LYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAK 197
           L +   G+E+++P+ P  F+ +       +  A +   ATR    + FA + N +++ AK
Sbjct: 290 LENAAFGMEMLTPVFPQFFVMIGAAAGAGRSAAALIQAATRSCFNAGFASQRNFAEVIAK 349

Query: 198 GEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQ 257
           GEA   +   VGI  G+ +A+ I +S    L A  +++ +H+Y  ++  +   + TLNP 
Sbjct: 350 GEAQGMVSKSVGILLGIVVANCIGTSTSLALAAFGVVTTIHMYTNLKSYQCIQLRTLNPY 409

Query: 258 RTAMIVADFVKSGRIPSPADLRYHEDLVFP 287
           R +++ ++++ SG+ P   ++   E L FP
Sbjct: 410 RASLVFSEYLISGQAPLIKEVNDEEPL-FP 438

[Close]

BLAST of Carg11521 vs. Swiss-Prot
Match: sp|Q499P8|RUS1_RAT (RUS1 family protein C16orf58 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-26
Identity = 93/344 (27.03%), Postives = 168/344 (48.84%), Query Frame = 0


Query: 79  LSTQSLL--FAAGLRPTAAQATVVSWVLKDGMQHVGKLICS-NLGTRMDSEPKRWRVIAD 138
           L+TQ++L     G    +  A   +W++KD    +G++I +   G+++D   K+WR+ AD
Sbjct: 108 LATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFAD 167

Query: 139 VLYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFA 198
           +L D    LE+++P+ P  F       N AK +  VA  ATR  +    A+  N++D+ A
Sbjct: 168 ILNDTAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVSA 227

Query: 199 KGEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNP 258
           K  +  T+ N+ G+   L +   +   +   L    LL+ +H+Y     +RA  + TLN 
Sbjct: 228 KDSSQETVVNLAGLLVSLLMLPLVSDCLSLSLGCFILLTALHIYANYRAVRALVLETLNE 287

Query: 259 QRTAMIVADFVKSGRIPSPADLRYHEDLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMK 318
            R  +++  F++ G +  PA     E L + G     + S+ +G  LH ++  S + E+K
Sbjct: 288 SRLQLVLKHFLQRGEVLEPASANQMEPL-WTG--FWPSLSLSLGVPLHHLV--SSVSELK 347

Query: 319 QMFP--EEKFVL--NQTHKWVDMVLEHDASGEDALR----GWLVAAY---------TANI 378
           Q+    +E ++L  NQ+   V + L   A  E  LR    G ++ A           A +
Sbjct: 348 QLVEGHQEPYLLCWNQSQNQVQVALSQVAGPETVLRAATHGLILGALQEDGPLPGELAEL 407

Query: 379 K-----GPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDR 398
           +     GP +E +  ++ E ++ ++ +F  F+  LQA GW T++
Sbjct: 408 RDMVQAGPKNE-SWILVRETHQVLDTLFPKFLKGLQAAGWKTEK 445

[Close]

BLAST of Carg11521 vs. Swiss-Prot
Match: sp|Q84JB8|RUS3_ARATH (Protein root UVB sensitive 3 OS=Arabidopsis thaliana OX=3702 GN=RUS3 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-26
Identity = 96/394 (24.37%), Postives = 183/394 (46.45%), Query Frame = 0


Query: 46  IIDDSRPAIQRVVDSF-------LSTFFPSGYPYSA-------------------ALSVL 105
           I   S  +IQR  + F       L  F P G+P S                       +L
Sbjct: 31  ITASSSLSIQRSANRFNHVWRRVLQAFVPEGFPGSVTPDYVGFQLWDTLQGLSTYTKMML 90

Query: 106 STQSLLFAAGLRPTAAQ--ATVVSWVLKDGMQHVGKLICS-NLGTRMDSEPKRWRVIADV 165
           STQ+LL A G+   +A        W L+D    +G ++ +   G+ +DS  K WR++AD+
Sbjct: 91  STQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVADL 150

Query: 166 LYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAK 225
           + D G  ++++SPL P  F+ +  LG+ ++    VA+ ATR  +   FA + N +D+ AK
Sbjct: 151 MNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATRAALTQHFALQDNAADISAK 210

Query: 226 GEAISTLFNVVGIGAGLQLASTICSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQ 285
             +  T+  ++G+  G+ LA     +     ++   L++ H+Y     +R   +N+LN +
Sbjct: 211 EGSQETMATMMGMSLGMLLARFTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFE 270

Query: 286 RTAMIVADFVKSGRIPSPADLRYHED-LVFPGRLIEDAGSVKVGRALHEVIKPSKL--VE 345
           R+++++  F+++G++ SP  +   E  L      +    S  + + +   ++ S L  ++
Sbjct: 271 RSSILLTHFIQTGQVLSPEQVSSMEGVLPLWATSLRSTNSKPLHKRVQLGVRVSSLPRLD 330

Query: 346 MKQM--------FPEEKFVLNQTHKWVDMVLEHDASGEDALRGWLVAAYTANIKGPSHEP 400
           M Q+        +   K++L      V ++L  D+   D L+ ++ A   AN+     E 
Sbjct: 331 MLQLLNGVGASSYKNAKYLLAHIKGNVSVILHKDSKPADVLKSYIHAIVLANLM----EK 390

[Close]

BLAST of Carg11521 vs. TrEMBL
Match: tr|A0A1S3BR38|A0A1S3BR38_CUCME (protein root UVB sensitive 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492596 PE=4 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 2.3e-215
Identity = 383/428 (89.49%), Postives = 395/428 (92.29%), Query Frame = 0


Query: 1   MDFLNKFNVR-KDTEKSPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVD 60
           MD LNKFN R KD  KSPS PVSWIE+S+SVSRRCQFQPDG LSVKIIDDSRPAIQR+VD
Sbjct: 1   MDLLNKFNARKKDPVKSPSLPVSWIEVSDSVSRRCQFQPDGHLSVKIIDDSRPAIQRIVD 60

Query: 61  SFLSTFFPSGYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATVV 120
           SFL+TFFPSGYPY                   SAALSVLSTQSLLFAAGLRPTAAQATVV
Sbjct: 61  SFLNTFFPSGYPYSVNEGYLRYTQFRALQHVTSAALSVLSTQSLLFAAGLRPTAAQATVV 120

Query: 121 SWVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAG 180
           SWVLKDGMQHVGKLICSNLG RMDSEPKRWRVIADVLYD GAGLEVISPLCPHLFL+MAG
Sbjct: 121 SWVLKDGMQHVGKLICSNLGARMDSEPKRWRVIADVLYDLGAGLEVISPLCPHLFLEMAG 180

Query: 181 LGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTIC 240
           LGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTIC
Sbjct: 181 LGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTIC 240

Query: 241 SSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYH 300
           SSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPAD+RY 
Sbjct: 241 SSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADIRYQ 300

Query: 301 EDLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDA 360
           EDLVFPGRLIE+AG+VKVGRALHEVIKPSKLVEMKQ+FPEEKFVLNQ+ KWVDMVLEHDA
Sbjct: 301 EDLVFPGRLIEEAGNVKVGRALHEVIKPSKLVEMKQIFPEEKFVLNQSQKWVDMVLEHDA 360

Query: 361 SGEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLD 409
           SGEDALRGWLVAAYTANIKGPSHEPTAS LLEAYEKMNDVFTPF+SELQ KGWHTDRFLD
Sbjct: 361 SGEDALRGWLVAAYTANIKGPSHEPTASALLEAYEKMNDVFTPFLSELQGKGWHTDRFLD 420

[Close]

BLAST of Carg11521 vs. TrEMBL
Match: tr|A0A2I4FSG9|A0A2I4FSG9_9ROSI (protein root UVB sensitive 2, chloroplastic isoform X3 OS=Juglans regia OX=51240 GN=LOC109001677 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 7.6e-182
Identity = 318/429 (74.13%), Postives = 365/429 (85.08%), Query Frame = 0


Query: 1   MDFLNKFNVRKDTEKS--PSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVV 60
           M+ L K  ++K   +   P  P+ W EISESVSRR  F  DGQLS+KI+DDSRP IQR++
Sbjct: 11  MNLLEKLKMQKKEPQKPPPESPLFWTEISESVSRRFNFDKDGQLSMKILDDSRPVIQRMI 70

Query: 61  DSFLSTFFPSGYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATV 120
           DSFL+TFFPSGYPY                   SAALSVLSTQSLLFAAGLRPT AQAT 
Sbjct: 71  DSFLNTFFPSGYPYSVSEGYLRYTQFRALQHCSSAALSVLSTQSLLFAAGLRPTPAQATA 130

Query: 121 VSWVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMA 180
           VSW+LKDGMQHVGKLIC+NLG RMDSEPK WR++ADVLYD G GLEV+SPLCPHLFL++A
Sbjct: 131 VSWILKDGMQHVGKLICTNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCPHLFLEVA 190

Query: 181 GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTI 240
           GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTL NVVG+GAG+QLASTI
Sbjct: 191 GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLSNVVGLGAGIQLASTI 250

Query: 241 CSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRY 300
           CSS+QGKLV  PLLSI+H+Y V+E++RA P+NTLNPQRTAMIVADF+K+G+I SPADLRY
Sbjct: 251 CSSMQGKLVVGPLLSIIHIYSVIEEIRAAPVNTLNPQRTAMIVADFLKTGKISSPADLRY 310

Query: 301 HEDLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHD 360
            EDL+F GRLIEDAG+VKVGRAL +V+KPSKL E+KQ+FPEEKF+LN+ + WVDMVL HD
Sbjct: 311 REDLLFTGRLIEDAGNVKVGRALRKVVKPSKLQELKQIFPEEKFLLNRGNNWVDMVLTHD 370

Query: 361 ASGEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFL 409
           A+ EDALRGWLVAAY A+++  SHEP+A VL +AYEKMNDVF+PF+SELQAKGWHTDRFL
Sbjct: 371 ATAEDALRGWLVAAYAADMEKSSHEPSAIVLQDAYEKMNDVFSPFLSELQAKGWHTDRFL 430

[Close]

BLAST of Carg11521 vs. TrEMBL
Match: tr|A0A2I4FSI5|A0A2I4FSI5_9ROSI (protein root UVB sensitive 2, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC109001677 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 7.6e-182
Identity = 318/429 (74.13%), Postives = 365/429 (85.08%), Query Frame = 0


Query: 1   MDFLNKFNVRKDTEKS--PSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVV 60
           M+ L K  ++K   +   P  P+ W EISESVSRR  F  DGQLS+KI+DDSRP IQR++
Sbjct: 3   MNLLEKLKMQKKEPQKPPPESPLFWTEISESVSRRFNFDKDGQLSMKILDDSRPVIQRMI 62

Query: 61  DSFLSTFFPSGYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATV 120
           DSFL+TFFPSGYPY                   SAALSVLSTQSLLFAAGLRPT AQAT 
Sbjct: 63  DSFLNTFFPSGYPYSVSEGYLRYTQFRALQHCSSAALSVLSTQSLLFAAGLRPTPAQATA 122

Query: 121 VSWVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMA 180
           VSW+LKDGMQHVGKLIC+NLG RMDSEPK WR++ADVLYD G GLEV+SPLCPHLFL++A
Sbjct: 123 VSWILKDGMQHVGKLICTNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCPHLFLEVA 182

Query: 181 GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTI 240
           GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTL NVVG+GAG+QLASTI
Sbjct: 183 GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLSNVVGLGAGIQLASTI 242

Query: 241 CSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRY 300
           CSS+QGKLV  PLLSI+H+Y V+E++RA P+NTLNPQRTAMIVADF+K+G+I SPADLRY
Sbjct: 243 CSSMQGKLVVGPLLSIIHIYSVIEEIRAAPVNTLNPQRTAMIVADFLKTGKISSPADLRY 302

Query: 301 HEDLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHD 360
            EDL+F GRLIEDAG+VKVGRAL +V+KPSKL E+KQ+FPEEKF+LN+ + WVDMVL HD
Sbjct: 303 REDLLFTGRLIEDAGNVKVGRALRKVVKPSKLQELKQIFPEEKFLLNRGNNWVDMVLTHD 362

Query: 361 ASGEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFL 409
           A+ EDALRGWLVAAY A+++  SHEP+A VL +AYEKMNDVF+PF+SELQAKGWHTDRFL
Sbjct: 363 ATAEDALRGWLVAAYAADMEKSSHEPSAIVLQDAYEKMNDVFSPFLSELQAKGWHTDRFL 422

[Close]

BLAST of Carg11521 vs. TrEMBL
Match: tr|A0A2I4FSH4|A0A2I4FSH4_9ROSI (protein root UVB sensitive 2, chloroplastic isoform X4 OS=Juglans regia OX=51240 GN=LOC109001677 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 7.6e-182
Identity = 318/429 (74.13%), Postives = 365/429 (85.08%), Query Frame = 0


Query: 1   MDFLNKFNVRKDTEKS--PSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVV 60
           M+ L K  ++K   +   P  P+ W EISESVSRR  F  DGQLS+KI+DDSRP IQR++
Sbjct: 3   MNLLEKLKMQKKEPQKPPPESPLFWTEISESVSRRFNFDKDGQLSMKILDDSRPVIQRMI 62

Query: 61  DSFLSTFFPSGYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATV 120
           DSFL+TFFPSGYPY                   SAALSVLSTQSLLFAAGLRPT AQAT 
Sbjct: 63  DSFLNTFFPSGYPYSVSEGYLRYTQFRALQHCSSAALSVLSTQSLLFAAGLRPTPAQATA 122

Query: 121 VSWVLKDGMQHVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMA 180
           VSW+LKDGMQHVGKLIC+NLG RMDSEPK WR++ADVLYD G GLEV+SPLCPHLFL++A
Sbjct: 123 VSWILKDGMQHVGKLICTNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCPHLFLEVA 182

Query: 181 GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTI 240
           GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTL NVVG+GAG+QLASTI
Sbjct: 183 GLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLSNVVGLGAGIQLASTI 242

Query: 241 CSSIQGKLVAAPLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRY 300
           CSS+QGKLV  PLLSI+H+Y V+E++RA P+NTLNPQRTAMIVADF+K+G+I SPADLRY
Sbjct: 243 CSSMQGKLVVGPLLSIIHIYSVIEEIRAAPVNTLNPQRTAMIVADFLKTGKISSPADLRY 302

Query: 301 HEDLVFPGRLIEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHD 360
            EDL+F GRLIEDAG+VKVGRAL +V+KPSKL E+KQ+FPEEKF+LN+ + WVDMVL HD
Sbjct: 303 REDLLFTGRLIEDAGNVKVGRALRKVVKPSKLQELKQIFPEEKFLLNRGNNWVDMVLTHD 362

Query: 361 ASGEDALRGWLVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFL 409
           A+ EDALRGWLVAAY A+++  SHEP+A VL +AYEKMNDVF+PF+SELQAKGWHTDRFL
Sbjct: 363 ATAEDALRGWLVAAYAADMEKSSHEPSAIVLQDAYEKMNDVFSPFLSELQAKGWHTDRFL 422

[Close]

BLAST of Carg11521 vs. TrEMBL
Match: tr|A0A2I4FSG6|A0A2I4FSG6_9ROSI (protein root UVB sensitive 2, chloroplastic isoform X2 OS=Juglans regia OX=51240 GN=LOC109001677 PE=4 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 4.9e-181
Identity = 316/419 (75.42%), Postives = 362/419 (86.40%), Query Frame = 0


Query: 10  RKDTEK-SPSGPVSWIEISESVSRRCQFQPDGQLSVKIIDDSRPAIQRVVDSFLSTFFPS 69
           +K+ +K  P  P+ W EISESVSRR  F  DGQLS+KI+DDSRP IQR++DSFL+TFFPS
Sbjct: 3   KKEPQKPPPESPLFWTEISESVSRRFNFDKDGQLSMKILDDSRPVIQRMIDSFLNTFFPS 62

Query: 70  GYPY-------------------SAALSVLSTQSLLFAAGLRPTAAQATVVSWVLKDGMQ 129
           GYPY                   SAALSVLSTQSLLFAAGLRPT AQAT VSW+LKDGMQ
Sbjct: 63  GYPYSVSEGYLRYTQFRALQHCSSAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQ 122

Query: 130 HVGKLICSNLGTRMDSEPKRWRVIADVLYDFGAGLEVISPLCPHLFLQMAGLGNFAKGMA 189
           HVGKLIC+NLG RMDSEPK WR++ADVLYD G GLEV+SPLCPHLFL++AGLGNFAKGMA
Sbjct: 123 HVGKLICTNLGARMDSEPKSWRILADVLYDLGTGLEVLSPLCPHLFLEVAGLGNFAKGMA 182

Query: 190 VVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLFNVVGIGAGLQLASTICSSIQGKLVA 249
           VVAARATRLPIYSSFAKEGNLSDLFAKGEAISTL NVVG+GAG+QLASTICSS+QGKLV 
Sbjct: 183 VVAARATRLPIYSSFAKEGNLSDLFAKGEAISTLSNVVGLGAGIQLASTICSSMQGKLVV 242

Query: 250 APLLSIVHVYCVVEQMRATPINTLNPQRTAMIVADFVKSGRIPSPADLRYHEDLVFPGRL 309
            PLLSI+H+Y V+E++RA P+NTLNPQRTAMIVADF+K+G+I SPADLRY EDL+F GRL
Sbjct: 243 GPLLSIIHIYSVIEEIRAAPVNTLNPQRTAMIVADFLKTGKISSPADLRYREDLLFTGRL 302

Query: 310 IEDAGSVKVGRALHEVIKPSKLVEMKQMFPEEKFVLNQTHKWVDMVLEHDASGEDALRGW 369
           IEDAG+VKVGRAL +V+KPSKL E+KQ+FPEEKF+LN+ + WVDMVL HDA+ EDALRGW
Sbjct: 303 IEDAGNVKVGRALRKVVKPSKLQELKQIFPEEKFLLNRGNNWVDMVLTHDATAEDALRGW 362

Query: 370 LVAAYTANIKGPSHEPTASVLLEAYEKMNDVFTPFVSELQAKGWHTDRFLDGVGTRFAW 409
           LVAAY A+++  SHEP+A VL +AYEKMNDVF+PF+SELQAKGWHTDRFLDG G+RFAW
Sbjct: 363 LVAAYAADMEKSSHEPSAIVLQDAYEKMNDVFSPFLSELQAKGWHTDRFLDGTGSRFAW 421

The following BLAST results are available for this feature:

BLAST of Carg11521 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547688.1	1.2e-228	95.08	protein root UVB sensitive 2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022953234.1	3.6e-228	94.85	protein root UVB sensitive 2, chloroplastic [Cucurbita moschata]	[more]
XP_022991969.1	8.1e-228	94.61	protein root UVB sensitive 2, chloroplastic [Cucurbita maxima]	[more]
XP_008451249.1	3.5e-215	89.49	PREDICTED: protein root UVB sensitive 2, chloroplastic [Cucumis melo]	[more]
XP_004148953.1	5.6e-213	88.79	PREDICTED: protein root UVB sensitive 2, chloroplastic [Cucumis sativus]	[more]

BLAST of Carg11521 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31190.1	3.4e-172	71.01	Protein of unknown function, DUF647	[more]
AT5G49820.1	4.0e-35	28.70	Protein of unknown function, DUF647	[more]
AT3G45890.1	4.2e-29	32.38	Protein of unknown function, DUF647	[more]
AT1G13770.1	1.4e-27	24.37	Protein of unknown function, DUF647	[more]
AT5G01510.1	1.2e-23	25.61	Protein of unknown function, DUF647	[more]

BLAST of Carg11521 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJX7\|RUS2_ARATH	6.2e-171	71.01	Protein root UVB sensitive 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
sp\|Q93YU2\|RUS6_ARATH	7.1e-34	28.70	Protein root UVB sensitive 6 OS=Arabidopsis thaliana OX=3702 GN=RUS6 PE=2 SV=1	[more]
sp\|Q7X6P3\|RUS1_ARATH	7.6e-28	32.38	Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
sp\|Q499P8\|RUS1_RAT	1.9e-26	27.03	RUS1 family protein C16orf58 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1	[more]
sp\|Q84JB8\|RUS3_ARATH	2.5e-26	24.37	Protein root UVB sensitive 3 OS=Arabidopsis thaliana OX=3702 GN=RUS3 PE=2 SV=1	[more]

BLAST of Carg11521 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BR38\|A0A1S3BR38_CUCME	2.3e-215	89.49	protein root UVB sensitive 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492...	[more]
tr\|A0A2I4FSG9\|A0A2I4FSG9_9ROSI	7.6e-182	74.13	protein root UVB sensitive 2, chloroplastic isoform X3 OS=Juglans regia OX=51240...	[more]
tr\|A0A2I4FSI5\|A0A2I4FSI5_9ROSI	7.6e-182	74.13	protein root UVB sensitive 2, chloroplastic isoform X1 OS=Juglans regia OX=51240...	[more]
tr\|A0A2I4FSH4\|A0A2I4FSH4_9ROSI	7.6e-182	74.13	protein root UVB sensitive 2, chloroplastic isoform X4 OS=Juglans regia OX=51240...	[more]
tr\|A0A2I4FSG6\|A0A2I4FSG6_9ROSI	4.9e-181	75.42	protein root UVB sensitive 2, chloroplastic isoform X2 OS=Juglans regia OX=51240...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006968	RUS_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11521-RA	Carg11521-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006968	Root UVB sensitive family	PFAM	PF04884	DUF647	coord: 73..268 e-value: 1.0E-52 score: 179.1
IPR006968	Root UVB sensitive family	PANTHER	PTHR12770	FAMILY NOT NAMED	coord: 10..408
None	No IPR available	PANTHER	PTHR12770:SF5	PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC	coord: 10..408

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11521	Cla014835	Watermelon (97103) v1	carwmB0014
Carg11521	Csa7G375770	Cucumber (Chinese Long) v2	carcuB0013
Carg11521	MELO3C015730	Melon (DHL92) v3.5.1	carmeB0012
Carg11521	ClCG09G007800	Watermelon (Charleston Gray)	carwcgB0012
Carg11521	CSPI07G15560	Wild cucumber (PI 183967)	carcpiB0013
Carg11521	Cucsa.388480	Cucumber (Gy14) v1	carcgyB0013
Carg11521	CmaCh17G013470	Cucurbita maxima (Rimu)	carcmaB0020
Carg11521	CmoCh17G013100	Cucurbita moschata (Rifu)	carcmoB0021
Carg11521	Lsi02G022090	Bottle gourd (USVL1VR-Ls)	carlsiB012
Carg11521	Cp4.1LG12g10330	Cucurbita pepo (Zucchini)	carcpeB0018
Carg11521	CsGy7G014060	Cucumber (Gy14) v2	carcgybB0012
Carg11521	MELO3C015730.2	Melon (DHL92) v3.6.1	carmedB0013
Carg11521	CsaV3_7G027330	Cucumber (Chinese Long) v3	carcucB0013
Carg11521	Cla97C09G170410	Watermelon (97103) v2	carwmbB0012
Carg11521	Bhi09G000968	Wax gourd	carwgoB0015

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11521	Silver-seed gourd	carcarB009
Carg11521	Cucurbita maxima (Rimu)	carcmaB0021
Carg11521	Cucurbita moschata (Rifu)	carcmoB0022
Carg11521	Cucurbita pepo (Zucchini)	carcpeB0023