Carg11481 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGGGCTTTCTCCATGTATTAGCCCAACAGAAGCGATGTTCAGCTCCAAGAACGAAAGGAAACAATTCGCAATGGAAGAAATCTCAGGACAATCGACTTCGACGCCAACAATCGTCCGATCACCGAGCTTTGGGTTATTGAAATGATCACTGATCCATGTGAATTTCACGTCATTCAAATGAAGCAGATGGTTAGTGTTCAGATTATTTGAACTTGTTTTTATATCTGTATGGCCGAATGATTTCGATTTTGTGTGCGAAGAACGTATGATTTTGTTTGTAGTTCATATGCGTTTCTTATAATTGGTCTGCCTCAAAGTTTTTGTTCCATGTTGACGCTTTCCATTTCGAATTTCGCCCTATCGGTTTCTCCGATGCGTTTAGGTTGGTACATGTGAAGCATTGGTGGAGAATACTTTAGCTTTGGATGGAACTATCTCATCAAGTGATTTTTACAAGGCTGCTTGTGCTTTTGTTCATAGATGGAATCTGATCAACTCTGATTTTCCTTCATGGTCATGGATTCCATTTCAGAAACTACGGTGGATTAGTTCTGATGATAAGGTGAAGTTTGTTCTTGTTTGGATTAGATATCACTGATTTACAAGGCTGCTTATGCCTTTTTATATGCTACTAGGTGGAAGGATACTTATCTTTGGAGAAAATATGCCTTCTGAGACCACAAGAGGTCTGCTTCTTCCATTTTCGTGGTCCTTTTTTGTTTTTCCTCTGCAATTCACAATTGTTCTTCATTTTTTCGTTTAAATGTTTTCTACAGAACGAGCAGGAGAAAGGAGAGTGTTTTGAGGAAATAGATACTGCTGACAACAACAATGAGTCTCTCGATGAAGCTACATTAGTATGTGCTTTCTGTAATTGATGTTCTTGTGTGTGGTAACCATACTTCTTTAGTTGTGTGATATCTGTTGCATTCATTAACCAAACTCTCCCGTTTTTCTCAAGGTCTCCTCCCCAAGTGATCATGAAGAAGTACATTACTATGATTTTCACGTTCTGCACTGTTCTTCATATAGTGTTCCAGTGCTTTACTTTCGAGCTTACAGTTGTGGTATGCAAGTTTTATTGTTCCATTATACCTTTTTAAGATCACGCTTTAGAATATTCTTGTTTGATGCGAATGCAAACATAAAACTTTTAGTTTCTAGATATTTAGCAAATGGATTGTAACAGCTCAAGCCTACCACTAGTAGATATTGTCCTCTTTGATTTTTCCCTCTTGGGGTTCTCCTCAAGTTTTTTAAAATACGTCTGCGAAGGAGAGGTTTCCATACTCTTATAAACAATGTTTTGTTCTCCTCTTCAATCGGCGTGGGATCTCACATGAATAGATTGATGTGTTCTGATGTAATATTTGGTTATTTATCCATAACTTTCTGAGCTTGCTAATACCTGTAATTAGCATGCTCCTTGAAATGTTGAATGTAGTTATTCTAAAAATGTGATTCGGTGGCATATATTGGAAATTAAGGTGTGTGACATCATGGGTTATTCCAAGTGACTTAAGCCATTGCAAAATCTTTCCACACATTCTTAATTTTTCCTCTGTGAATTGATCTTTTAGACCCTTTTCCTAGAATCATGATCCTTATTTATTTTCAAAAAGATAAAGAAACTTTCCTTGATAATAGTAAAATATAGATCAACCAGTTAAAGTATTATATCCTCGACCAAAAGGTGTACGAATCCTCAACCAAAAGGTTAGAGGTACGAATCCTCAACCCTAGCTGATATTGAACGAAAAAAATTGAGAAGTATAAAAGAGGGGCAACACTGACAGTATGATTTTGACTCTGTTAGACAAGGAAGCTACAATAGAATGTCACTTGCATGTCGAGAATGAGTGGTTGAATGTATGTGCTTTGTCTTCGCTATGATCTGTTTCCACTGTCTCTATCTTCCCCCTTGGCCTAATTATGGTATAGGAAATAGGAGGTTTAAAATATCTATTTTTTGGGTGGATGTGTTTGAATTCTGTTCCTAATATGAAGTATTTCCCATTCAGTATACTAATTTTGTAAAGTGTGCAGATGGACAACCTCTGACGTTTGAAGAAATGAAAAAGGACCTTCCATCACAGTCTGCAGATACACTATTGAATTCAAAATGGACATTTATTACTCAGGAGGTACAGCTTTTCTTTGACATTTTTTTTGGCCTTTGGTTTTGGATGCACCAAGCATAAATGAGTTTGCATTAAAACAAAAGAAGGAACAGTTTACAGGCAGGGTAGAGAGAACCCCCTCCCAACATAAATGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCCCCTTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGTACAAAAGGAAAAATCCAAAGAGGATAATATTTGCTAGCGGTGGGCTTGAGCCGTTACTAATGGTATCAGAGTCAGACACCAGGCGATGAGCCAACAAGGAGGCTGAGCTCCGAAGGGGGTGGAGATGAGGTGGTGTGCCAGCAAGGATGTTGGGTCCCAAAGGGGGGTGGATTGAGGGTCCCCACACCGATTGGAGAAGGGAAAGAGTGGCAGCGAGTACGCTGGGCCCGGGGGGGGGGGGGGTGGATTGTGAGATCCCACGTCGGTTGGGGACGTCGGTTGGGGAGGAGAACGAAGCATTTTTTATAAGACACCTCTCTTAGCAGATGTGTTTTAAAAACTTTGAGAGGAAATCTGAAAGGGAAAGCTCAAAAAGGACAGTATCTGATAGCGGTGGGACCATATGCATGTTCTGAAAGTTTCTTTTCTATCTCTGTCGCGGTCATTTTCTGATTGAGAAATAAGAATGCAGGATGCTTTTTTTTTTTTTTTTTTCCTTTTTTCTTGTACATGAACTTTGTGATGTTAACTGGTTTTGGTATGGATTAATGTCAGGAGCATCCATATTTAAACAGAATATGGTTCAAATTACATCCTTGTGGAACGAGGGAATGGATGAAGCTACTCTTACTTAGTGACGCATCCTGGTTCAAGAATGAGATAGCGATTGAAAGATATGTCGCCTCATGGCTCTCAGTTGTGGGGCAAGTAGTTGGCTTGAGAATCCCCATGGAAATGTTGAAAGATGGCGGTGGCACCCAGTTCTGATTCTGGTGTTCCTCACCATTTTATCAGCCTTATGTATGTTTGGTTTTGCTATTGGCAGGTGGAGGGTGCTTTTAGACCATTGAAACCACATCTCAAAATTTGTATATATATTGCTTTATGATATAATCTGATTATGGGAATTGTCATTTTTGTCACTTCCTACGAGCTCGACATTTATCGGAGTTAAGTACTAAAATGAACGTGTAATTGCGAAGAAGCTATTCTCTTGTAAATGCCCCCTAATTTTGAGTCGGAGGGTTTAAGTTAAATTATAAGTTTAGCAAGTTTCATACATATCTGAATTTGTGTTGTAGTAGATCTACGAGCATCTACTTGGTATTAAGAGTTCAGAAATTTATGTTTAGACGTTTGAACATGTGTTTAGATGTTTAAATCCCGAGTAAGATCGGAGTATGGAATTCAAATTCCTCCTTGCTTCAGTTCTGTTTGAATCTGTTCCAACAACGAAAAACCTCCTGGCCTAATCCTGGCCTAATCCTTTCCTTTTCCTAGAATCCACTTTGGATCGGGTCGGTAGAGCTGCTAGTTCAACATC TTTGGGCTTTCTCCATGTATTAGCCCAACAGAAGCGATGTTCAGCTCCAAGAACGAAAGGAAACAATTCGCAATGGAAGAAATCTCAGGACAATCGACTTCGACGCCAACAATCGTCCGATCACCGAGCTTTGGGTTATTGAAATGATCACTGATCCATGTGAATTTCACGTCATTCAAATGAAGCAGATGGTTGGTACATGTGAAGCATTGGTGGAGAATACTTTAGCTTTGGATGGAACTATCTCATCAAGTGATTTTTACAAGGCTGCTTGTGCTTTTGTTCATAGATGGAATCTGATCAACTCTGATTTTCCTTCATGGTCATGGATTCCATTTCAGAAACTACGGTGGATTAGTTCTGATGATAAGGTGGAAGGATACTTATCTTTGGAGAAAATATGCCTTCTGAGACCACAAGAGAACGAGCAGGAGAAAGGAGAGTGTTTTGAGGAAATAGATACTGCTGACAACAACAATGAGTCTCTCGATGAAGCTACATTAGTCTCCTCCCCAAGTGATCATGAAGAAGTACATTACTATGATTTTCACGTTCTGCACTGTTCTTCATATAGTGTTCCAGTGCTTTACTTTCGAGCTTACAGTTGTGATGGACAACCTCTGACGTTTGAAGAAATGAAAAAGGACCTTCCATCACAGTCTGCAGATACACTATTGAATTCAAAATGGACATTTATTACTCAGGAGGAGCATCCATATTTAAACAGAATATGGTTCAAATTACATCCTTGTGGAACGAGGGAATGGATGAAGCTACTCTTACTTAGTGACGCATCCTGGTTCAAGAATGAGATAGCGATTGAAAGATATGTCGCCTCATGGCTCTCAGTTGTGGGGCAAGTAGTTGGCTTGAGAATCCCCATGGAAATGTTGAAAGATGGCGGTGGCACCCAGTTCTGATTCTGGTGTTCCTCACCATTTTATCAGCCTTATGTATGTTTGGTTTTGCTATTGGCAGGTGGAGGGTGCTTTTAGACCATTGAAACCACATCTCAAAATTTGTATATATATTGCTTTATGATATAATCTGATTATGGGAATTGTCATTTTTGTCACTTCCTACGAGCTCGACATTTATCGGAGTTAAGTACTAAAATGAACGTGTAATTGCGAAGAAGCTATTCTCTTGTAAATGCCCCCTAATTTTGAGTCGGAGGGTTTAAGTTAAATTATAAGTTTAGCAAGTTTCATACATATCTGAATTTGTGTTGTAGTAGATCTACGAGCATCTACTTGGTATTAAGAGTTCAGAAATTTATGTTTAGACGTTTGAACATGTGTTTAGATGTTTAAATCCCGAGTAAGATCGGAGTATGGAATTCAAATTCCTCCTTGCTTCAGTTCTGTTTGAATCTGTTCCAACAACGAAAAACCTCCTGGCCTAATCCTGGCCTAATCCTTTCCTTTTCCTAGAATCCACTTTGGATCGGGTCGGTAGAGCTGCTAGTTCAACATC ATGATCACTGATCCATGTGAATTTCACGTCATTCAAATGAAGCAGATGGTTGGTACATGTGAAGCATTGGTGGAGAATACTTTAGCTTTGGATGGAACTATCTCATCAAGTGATTTTTACAAGGCTGCTTGTGCTTTTGTTCATAGATGGAATCTGATCAACTCTGATTTTCCTTCATGGTCATGGATTCCATTTCAGAAACTACGGTGGATTAGTTCTGATGATAAGGTGGAAGGATACTTATCTTTGGAGAAAATATGCCTTCTGAGACCACAAGAGAACGAGCAGGAGAAAGGAGAGTGTTTTGAGGAAATAGATACTGCTGACAACAACAATGAGTCTCTCGATGAAGCTACATTAGTCTCCTCCCCAAGTGATCATGAAGAAGTACATTACTATGATTTTCACGTTCTGCACTGTTCTTCATATAGTGTTCCAGTGCTTTACTTTCGAGCTTACAGTTGTGATGGACAACCTCTGACGTTTGAAGAAATGAAAAAGGACCTTCCATCACAGTCTGCAGATACACTATTGAATTCAAAATGGACATTTATTACTCAGGAGGAGCATCCATATTTAAACAGAATATGGTTCAAATTACATCCTTGTGGAACGAGGGAATGGATGAAGCTACTCTTACTTAGTGACGCATCCTGGTTCAAGAATGAGATAGCGATTGAAAGATATGTCGCCTCATGGCTCTCAGTTGTGGGGCAAGTAGTTGGCTTGAGAATCCCCATGGAAATGTTGAAAGATGGCGGTGGCACCCAGTTCTGA MITDPCEFHVIQMKQMVGTCEALVENTLALDGTISSSDFYKAACAFVHRWNLINSDFPSWSWIPFQKLRWISSDDKVEGYLSLEKICLLRPQENEQEKGECFEEIDTADNNNESLDEATLVSSPSDHEEVHYYDFHVLHCSSYSVPVLYFRAYSCDGQPLTFEEMKKDLPSQSADTLLNSKWTFITQEEHPYLNRIWFKLHPCGTREWMKLLLLSDASWFKNEIAIERYVASWLSVVGQVVGLRIPMEMLKDGGGTQF
BLAST of Carg11481 vs. NCBI nr
Match: XP_022953186.1 (ubiquitin-like-conjugating enzyme ATG10 isoform X2 [Cucurbita moschata]) HSP 1 Score: 511.9 bits (1317), Expect = 1.2e-141 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of Carg11481 vs. NCBI nr
Match: XP_023547583.1 (ubiquitin-like-conjugating enzyme ATG10 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 502.3 bits (1292), Expect = 9.9e-139 Identity = 254/258 (98.45%), Postives = 255/258 (98.84%), Query Frame = 0
BLAST of Carg11481 vs. NCBI nr
Match: XP_022953185.1 (ubiquitin-like-conjugating enzyme ATG10 isoform X1 [Cucurbita moschata]) HSP 1 Score: 435.6 bits (1119), Expect = 1.1e-118 Identity = 229/260 (88.08%), Postives = 236/260 (90.77%), Query Frame = 0
BLAST of Carg11481 vs. NCBI nr
Match: XP_022991518.1 (ubiquitin-like-conjugating enzyme ATG10 [Cucurbita maxima]) HSP 1 Score: 434.1 bits (1115), Expect = 3.3e-118 Identity = 223/246 (90.65%), Postives = 226/246 (91.87%), Query Frame = 0
BLAST of Carg11481 vs. NCBI nr
Match: XP_023547582.1 (ubiquitin-like-conjugating enzyme ATG10 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 426.0 bits (1094), Expect = 9.0e-116 Identity = 225/260 (86.54%), Postives = 233/260 (89.62%), Query Frame = 0
BLAST of Carg11481 vs. TAIR10
Match: AT3G07525.2 (autophagocytosis-associated family protein) HSP 1 Score: 194.5 bits (493), Expect = 8.0e-50 Identity = 105/221 (47.51%), Postives = 131/221 (59.28%), Query Frame = 0
BLAST of Carg11481 vs. Swiss-Prot
Match: sp|Q8VZ52|ATG10_ARATH (Ubiquitin-like-conjugating enzyme ATG10 OS=Arabidopsis thaliana OX=3702 GN=ATG10 PE=1 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 5.5e-48 Identity = 106/221 (47.96%), Postives = 131/221 (59.28%), Query Frame = 0
BLAST of Carg11481 vs. Swiss-Prot
Match: sp|Q9H0Y0|ATG10_HUMAN (Ubiquitin-like-conjugating enzyme ATG10 OS=Homo sapiens OX=9606 GN=ATG10 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.2e-17 Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 0
BLAST of Carg11481 vs. Swiss-Prot
Match: sp|Q8R1P4|ATG10_MOUSE (Ubiquitin-like-conjugating enzyme ATG10 OS=Mus musculus OX=10090 GN=Atg10 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16 Identity = 56/150 (37.33%), Postives = 79/150 (52.67%), Query Frame = 0
BLAST of Carg11481 vs. Swiss-Prot
Match: sp|Q55EL2|ATG10_DICDI (Ubiquitin-like-conjugating enzyme ATG10 OS=Dictyostelium discoideum OX=44689 GN=atg10 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.4e-13 Identity = 41/125 (32.80%), Postives = 66/125 (52.80%), Query Frame = 0
BLAST of Carg11481 vs. TrEMBL
Match: tr|A0A1S3C6K7|A0A1S3C6K7_CUCME (ubiquitin-like-conjugating enzyme ATG10 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497629 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 5.2e-104 Identity = 192/244 (78.69%), Postives = 205/244 (84.02%), Query Frame = 0
BLAST of Carg11481 vs. TrEMBL
Match: tr|A0A0A0K4P3|A0A0A0K4P3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G368220 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 3.4e-103 Identity = 189/243 (77.78%), Postives = 204/243 (83.95%), Query Frame = 0
BLAST of Carg11481 vs. TrEMBL
Match: tr|A0A1S4E1X7|A0A1S4E1X7_CUCME (ubiquitin-like-conjugating enzyme ATG10 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497629 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 9.2e-101 Identity = 189/244 (77.46%), Postives = 202/244 (82.79%), Query Frame = 0
BLAST of Carg11481 vs. TrEMBL
Match: tr|A0A1S3C710|A0A1S3C710_CUCME (ubiquitin-like-conjugating enzyme ATG10 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497629 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 6.3e-65 Identity = 131/172 (76.16%), Postives = 140/172 (81.40%), Query Frame = 0
BLAST of Carg11481 vs. TrEMBL
Match: tr|A0A1Q3C8B6|A0A1Q3C8B6_CEPFO (Autophagy_act_C domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19999 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.6e-60 Identity = 121/228 (53.07%), Postives = 156/228 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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