Carg11436 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCAAGAACAGAGAGGCTCGATGAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGAAATGAAGTATTGAATAGGGATGATAGGGGGTGGACTTCACTCCACATTGGTGCGCGAAAGGGTGATCTTAAAGAGGTGGGTTTCGTTTTCTCCTCTGCTATTTTCTTAGTTGAAGTGATGATGGGTGTTGTTTTTGTTGATTGATTCTTGAATTTTGTTTTGCAAATCTTGATCAGGTGAAGCGTCTGCTGAATGAAGGAATGGATGTGAATGCAGAAGCATGGGGCCCCAAATCGAAGGGGTTGACACCCCTTCACCTTGCTGCGGAGGGTGGGCATCTTGATTTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGATGCTAGAACCAAGGGTGCTTGTGGCTGTAAGTATCCTTATCTCTTACGGATTCATTCAATATAAAGCTTGAATTGATATGCTGAATTTATCTGGTATTTTATTGTTATCGATGAATCAAGTATTTGGAGTTCTAGAAAAGCTCTTGGGAAGTGATCTCATCCAATTCAATCATGAACAGTTTTGCTAACTTGTACTGTTAAATATGAAATGAATAAGCTATGCCCAATAGAATGGAATCTGAAGAACAAAGAATTAACATTTGCTAAAATTCATTGACAAAACTAACTAAAGAAGGGAGAAGGAAAGAAAAACTAGATTTAAGAGTATGGCTGATTCGTGATAGAGATTTTCTTTTTCTCCATGGGACATGCTCGGATGAGGGAGCACGATTAAGTAGGGAGCACATAGTGGGGGGAACGGAAATGAATTCCCAGTCCACCACTCGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGACTTACTCTCAAGTTTTTTAAAAACGCGTCCGCTAGGGAGAGGTTTCCACACCCTTATAAAGAAAGTTTCGTTCTCCTCTCCAACCAATGTGGGATCTCACAATTCATCCCCCTTCGGGACTGAGTGTCATCGTTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCCCCAATCCACCCCCTTCAGGGCCTAGCATCCTTGCTGGCGCACTGCCTCGTATCTACCCCCTTTGGGGCTCAGCCTCATCGCTGGCACATTGCTTGGTGTCTAGCTTTGATACCATTTGTAACAGCCTACCGGATACTATCCTTCATGGGCTTTCTCTCAAGATTTTTAAAATGCCTCTTCTAGGGAGAGGTTTCCACACCCTTATAATGGATCTCACATGTTATGTCCGGTAAATATTGTGTTGATGCTATGTTGCTGGGTTCACTATACGTAACACTTTTGAGGAGCAAGCAGACATGCACCGTGTAGGCATAGACTGTAGGCACGCGGTGGTGCTCGGGCTTGTAAAGCTCTTATTATTTCCTTGAACAAATGTGGATAAACAACCAAATTTTCTTGTTCTGAAAGTTGTTAAAGATATTGGCATTAGGATGGGTAAGAATATAGATAAAACGTTGAAGCCTTGTTGTAAAGATCCTAAACATTGATTATGTTGACATTGAACCCCAGGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTCGTGGAGAATGGAGCTTTCTTGCCTGATGACATAAATGACTGCAGATTTAATCCTCCACTGCACTACTGTCCCGGCCTCGAGTGGGCGTACGAGGAGGTCAAGCGTCTTCAACTCTACAATGGTTCGTCTAGTGAGACATCTTGCAGCTCTGAGAGCTGA ATGCCTCAAGAACAGAGAGGCTCGATGAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGAAATGAAGTATTGAATAGGGATGATAGGGGGTGGACTTCACTCCACATTGGTGCGCGAAAGGGTGATCTTAAAGAGGTGAAGCGTCTGCTGAATGAAGGAATGGATGTGAATGCAGAAGCATGGGGCCCCAAATCGAAGGGGTTGACACCCCTTCACCTTGCTGCGGAGGGTGGGCATCTTGATTTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGATGCTAGAACCAAGGGTGCTTGTGGCTGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTCGTGGAGAATGGAGCTTTCTTGCCTGATGACATAAATGACTGCAGATTTAATCCTCCACTGCACTACTGTCCCGGCCTCGAGTGGGCGTACGAGGAGGTCAAGCGTCTTCAACTCTACAATGGTTCGTCTAGTGAGACATCTTGCAGCTCTGAGAGCTGA ATGCCTCAAGAACAGAGAGGCTCGATGAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGAAATGAAGTATTGAATAGGGATGATAGGGGGTGGACTTCACTCCACATTGGTGCGCGAAAGGGTGATCTTAAAGAGGTGAAGCGTCTGCTGAATGAAGGAATGGATGTGAATGCAGAAGCATGGGGCCCCAAATCGAAGGGGTTGACACCCCTTCACCTTGCTGCGGAGGGTGGGCATCTTGATTTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGATGCTAGAACCAAGGGTGCTTGTGGCTGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTCGTGGAGAATGGAGCTTTCTTGCCTGATGACATAAATGACTGCAGATTTAATCCTCCACTGCACTACTGTCCCGGCCTCGAGTGGGCGTACGAGGAGGTCAAGCGTCTTCAACTCTACAATGGTTCGTCTAGTGAGACATCTTGCAGCTCTGAGAGCTGA MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKFLVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES
BLAST of Carg11436 vs. NCBI nr
Match: XP_022931271.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65 Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0
BLAST of Carg11436 vs. NCBI nr
Match: XP_022931269.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita moschata] >XP_022931270.1 phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65 Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0
BLAST of Carg11436 vs. NCBI nr
Match: XP_023552739.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65 Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of Carg11436 vs. NCBI nr
Match: XP_023552740.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65 Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of Carg11436 vs. NCBI nr
Match: XP_022985439.1 (phytochrome-interacting ankyrin-repeat protein 2-like [Cucurbita maxima]) HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64 Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0
BLAST of Carg11436 vs. TAIR10
Match: AT5G61230.1 (Ankyrin repeat family protein) HSP 1 Score: 152.9 bits (385), Expect = 1.8e-37 Identity = 113/150 (75.33%), Postives = 125/150 (83.33%), Query Frame = 0
BLAST of Carg11436 vs. TAIR10
Match: AT5G07840.1 (Ankyrin repeat family protein) HSP 1 Score: 101.3 bits (251), Expect = 6.2e-22 Identity = 101/173 (58.38%), Postives = 111/173 (64.16%), Query Frame = 0
BLAST of Carg11436 vs. Swiss-Prot
Match: sp|Q9FNP4|PIA2_ARATH (Phytochrome-interacting ankyrin-repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=PIA2 PE=1 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.2e-36 Identity = 113/150 (75.33%), Postives = 125/150 (83.33%), Query Frame = 0
BLAST of Carg11436 vs. Swiss-Prot
Match: sp|Q9FF09|PIA1_ARATH (Phytochrome-interacting ankyrin-repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=PIA1 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.1e-20 Identity = 101/173 (58.38%), Postives = 111/173 (64.16%), Query Frame = 0
BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A1S4DYZ9|A0A1S4DYZ9_CUCME (ankyrin-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493066 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.5e-57 Identity = 152/173 (87.86%), Postives = 156/173 (90.17%), Query Frame = 0
BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A1S3BSK3|A0A1S3BSK3_CUCME (ankyrin-3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493066 PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.5e-57 Identity = 152/173 (87.86%), Postives = 156/173 (90.17%), Query Frame = 0
BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A2P5FA42|A0A2P5FA42_9ROSA (Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_094380 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 7.2e-49 Identity = 104/171 (60.82%), Postives = 118/171 (69.01%), Query Frame = 0
BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A1R3JFX4|A0A1R3JFX4_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16707 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 9.4e-49 Identity = 135/173 (78.03%), Postives = 149/173 (86.13%), Query Frame = 0
BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A1R3J995|A0A1R3J995_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07137 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 4.7e-48 Identity = 135/173 (78.03%), Postives = 149/173 (86.13%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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