Carg11436 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11436
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ankyrin repeat family protein
Location	Cucurbita_argyrosperma_scaffold_025 : 1028789 .. 1030545 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCAAGAACAGAGAGGCTCGATGAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGAAATGAAGTATTGAATAGGGATGATAGGGGGTGGACTTCACTCCACATTGGTGCGCGAAAGGGTGATCTTAAAGAGGTGGGTTTCGTTTTCTCCTCTGCTATTTTCTTAGTTGAAGTGATGATGGGTGTTGTTTTTGTTGATTGATTCTTGAATTTTGTTTTGCAAATCTTGATCAGGTGAAGCGTCTGCTGAATGAAGGAATGGATGTGAATGCAGAAGCATGGGGCCCCAAATCGAAGGGGTTGACACCCCTTCACCTTGCTGCGGAGGGTGGGCATCTTGATTTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGATGCTAGAACCAAGGGTGCTTGTGGCTGTAAGTATCCTTATCTCTTACGGATTCATTCAATATAAAGCTTGAATTGATATGCTGAATTTATCTGGTATTTTATTGTTATCGATGAATCAAGTATTTGGAGTTCTAGAAAAGCTCTTGGGAAGTGATCTCATCCAATTCAATCATGAACAGTTTTGCTAACTTGTACTGTTAAATATGAAATGAATAAGCTATGCCCAATAGAATGGAATCTGAAGAACAAAGAATTAACATTTGCTAAAATTCATTGACAAAACTAACTAAAGAAGGGAGAAGGAAAGAAAAACTAGATTTAAGAGTATGGCTGATTCGTGATAGAGATTTTCTTTTTCTCCATGGGACATGCTCGGATGAGGGAGCACGATTAAGTAGGGAGCACATAGTGGGGGGAACGGAAATGAATTCCCAGTCCACCACTCGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGACTTACTCTCAAGTTTTTTAAAAACGCGTCCGCTAGGGAGAGGTTTCCACACCCTTATAAAGAAAGTTTCGTTCTCCTCTCCAACCAATGTGGGATCTCACAATTCATCCCCCTTCGGGACTGAGTGTCATCGTTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCCCCAATCCACCCCCTTCAGGGCCTAGCATCCTTGCTGGCGCACTGCCTCGTATCTACCCCCTTTGGGGCTCAGCCTCATCGCTGGCACATTGCTTGGTGTCTAGCTTTGATACCATTTGTAACAGCCTACCGGATACTATCCTTCATGGGCTTTCTCTCAAGATTTTTAAAATGCCTCTTCTAGGGAGAGGTTTCCACACCCTTATAATGGATCTCACATGTTATGTCCGGTAAATATTGTGTTGATGCTATGTTGCTGGGTTCACTATACGTAACACTTTTGAGGAGCAAGCAGACATGCACCGTGTAGGCATAGACTGTAGGCACGCGGTGGTGCTCGGGCTTGTAAAGCTCTTATTATTTCCTTGAACAAATGTGGATAAACAACCAAATTTTCTTGTTCTGAAAGTTGTTAAAGATATTGGCATTAGGATGGGTAAGAATATAGATAAAACGTTGAAGCCTTGTTGTAAAGATCCTAAACATTGATTATGTTGACATTGAACCCCAGGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTCGTGGAGAATGGAGCTTTCTTGCCTGATGACATAAATGACTGCAGATTTAATCCTCCACTGCACTACTGTCCCGGCCTCGAGTGGGCGTACGAGGAGGTCAAGCGTCTTCAACTCTACAATGGTTCGTCTAGTGAGACATCTTGCAGCTCTGAGAGCTGA

mRNA sequence

ATGCCTCAAGAACAGAGAGGCTCGATGAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGAAATGAAGTATTGAATAGGGATGATAGGGGGTGGACTTCACTCCACATTGGTGCGCGAAAGGGTGATCTTAAAGAGGTGAAGCGTCTGCTGAATGAAGGAATGGATGTGAATGCAGAAGCATGGGGCCCCAAATCGAAGGGGTTGACACCCCTTCACCTTGCTGCGGAGGGTGGGCATCTTGATTTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGATGCTAGAACCAAGGGTGCTTGTGGCTGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTCGTGGAGAATGGAGCTTTCTTGCCTGATGACATAAATGACTGCAGATTTAATCCTCCACTGCACTACTGTCCCGGCCTCGAGTGGGCGTACGAGGAGGTCAAGCGTCTTCAACTCTACAATGGTTCGTCTAGTGAGACATCTTGCAGCTCTGAGAGCTGA

Coding sequence (CDS)

ATGCCTCAAGAACAGAGAGGCTCGATGAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGAAATGAAGTATTGAATAGGGATGATAGGGGGTGGACTTCACTCCACATTGGTGCGCGAAAGGGTGATCTTAAAGAGGTGAAGCGTCTGCTGAATGAAGGAATGGATGTGAATGCAGAAGCATGGGGCCCCAAATCGAAGGGGTTGACACCCCTTCACCTTGCTGCGGAGGGTGGGCATCTTGATTTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGATGCTAGAACCAAGGGTGCTTGTGGCTGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTCGTGGAGAATGGAGCTTTCTTGCCTGATGACATAAATGACTGCAGATTTAATCCTCCACTGCACTACTGTCCCGGCCTCGAGTGGGCGTACGAGGAGGTCAAGCGTCTTCAACTCTACAATGGTTCGTCTAGTGAGACATCTTGCAGCTCTGAGAGCTGA

Protein sequence

MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAEAWGPKSKGLTPLHLAAEGGHLDLMDELLERGANIDARTKGACGWTPLHSAAKERRKEAVKFLVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES

Homology

[Close]

BLAST of Carg11436 vs. NCBI nr
Match: XP_022931271.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX
Sbjct: 40  MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 99

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF
Sbjct: 100 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 159

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 160 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 212

[Close]

BLAST of Carg11436 vs. NCBI nr
Match: XP_022931269.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita moschata] >XP_022931270.1 phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX
Sbjct: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 173

[Close]

BLAST of Carg11436 vs. NCBI nr
Match: XP_023552739.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX
Sbjct: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GACGWTPLHSAAKERRKEAVKF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 173

[Close]

BLAST of Carg11436 vs. NCBI nr
Match: XP_023552740.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 2.8e-65
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60
           MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX
Sbjct: 40  MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 99

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GACGWTPLHSAAKERRKEAVKF
Sbjct: 100 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGACGWTPLHSAAKERRKEAVKF 159

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 160 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 212

[Close]

BLAST of Carg11436 vs. NCBI nr
Match: XP_022985439.1 (phytochrome-interacting ankyrin-repeat protein 2-like [Cucurbita maxima])

HSP 1 Score: 255.8 bits (652), Expect = 1.1e-64
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60
           MPQEQRG MSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVN XX
Sbjct: 1   MPQEQRGPMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNAXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQ YNGSSSETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQHYNGSSSETSCSSES 173

[Close]

BLAST of Carg11436 vs. TAIR10
Match: AT5G61230.1 (Ankyrin repeat family protein)

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-37
Identity = 113/150 (75.33%), Postives = 125/150 (83.33%), Query Frame = 0


Query: 8   SMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXXXXXXXXX 67
           S+ R+  RRRS R+ V   DDRGW  LHI ARKGDLK VK+LL++GMDVN       XXX
Sbjct: 10  SLRRNSFRRRSPRSNV---DDRGWNPLHIKARKGDLKSVKQLLDQGMDVNALAWGPKXXX 69

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKFLVENGAF 127
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  CGWTPLH+AAKER++EAVKFLVENGAF
Sbjct: 70  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGWTPLHAAAKERKREAVKFLVENGAF 129

Query: 128 LPDDINDCRFNPPLHYCPGLEWAYEEVKRL 158
           L DDI D RFNPP+HYC GLEWAYEE+K+L
Sbjct: 130 LADDITDTRFNPPVHYCHGLEWAYEEMKKL 156

[Close]

BLAST of Carg11436 vs. TAIR10
Match: AT5G07840.1 (Ankyrin repeat family protein)

HSP 1 Score: 101.3 bits (251), Expect = 6.2e-22
Identity = 101/173 (58.38%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 1   MPQEQRGSMS-RSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXX 60
           M QEQ  ++S R  S RR      ++RDDRGWT LHI AR+GDLK VK LL++G DVN  
Sbjct: 1   MLQEQPVALSFRPNSFRRRSMETGVDRDDRGWTQLHIKAREGDLKAVKELLDQGADVNAL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVK 120
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAC                  
Sbjct: 61  ACGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACXXXXXXXXXXXXXXXXXX 120

Query: 121 FLVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNG-SSSETSCSS 172
                 AFLPDDI D RFNPP+ YC GLEWAYEE K+L      S  +TSCSS
Sbjct: 121 XXXXXXAFLPDDITDSRFNPPVQYCHGLEWAYEERKKLSEDTSLSCGDTSCSS 173

[Close]

BLAST of Carg11436 vs. Swiss-Prot
Match: sp|Q9FNP4|PIA2_ARATH (Phytochrome-interacting ankyrin-repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=PIA2 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.2e-36
Identity = 113/150 (75.33%), Postives = 125/150 (83.33%), Query Frame = 0


Query: 8   SMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXXXXXXXXX 67
           S+ R+  RRRS R+ V   DDRGW  LHI ARKGDLK VK+LL++GMDVN       XXX
Sbjct: 10  SLRRNSFRRRSPRSNV---DDRGWNPLHIKARKGDLKSVKQLLDQGMDVNALAWGPKXXX 69

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKFLVENGAF 127
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  CGWTPLH+AAKER++EAVKFLVENGAF
Sbjct: 70  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGWTPLHAAAKERKREAVKFLVENGAF 129

Query: 128 LPDDINDCRFNPPLHYCPGLEWAYEEVKRL 158
           L DDI D RFNPP+HYC GLEWAYEE+K+L
Sbjct: 130 LADDITDTRFNPPVHYCHGLEWAYEEMKKL 156

[Close]

BLAST of Carg11436 vs. Swiss-Prot
Match: sp|Q9FF09|PIA1_ARATH (Phytochrome-interacting ankyrin-repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=PIA1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-20
Identity = 101/173 (58.38%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 1   MPQEQRGSMS-RSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXX 60
           M QEQ  ++S R  S RR      ++RDDRGWT LHI AR+GDLK VK LL++G DVN  
Sbjct: 1   MLQEQPVALSFRPNSFRRRSMETGVDRDDRGWTQLHIKAREGDLKAVKELLDQGADVNAL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVK 120
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAC                  
Sbjct: 61  ACGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACXXXXXXXXXXXXXXXXXX 120

Query: 121 FLVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNG-SSSETSCSS 172
                 AFLPDDI D RFNPP+ YC GLEWAYEE K+L      S  +TSCSS
Sbjct: 121 XXXXXXAFLPDDITDSRFNPPVQYCHGLEWAYEERKKLSEDTSLSCGDTSCSS 173

[Close]

BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A1S4DYZ9|A0A1S4DYZ9_CUCME (ankyrin-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493066 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.5e-57
Identity = 152/173 (87.86%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60
           MPQEQR  +SRSLSRRRSFR EV N DDRGWTSLHIGARKGDLKEVKRLLN+GMDVN   
Sbjct: 40  MPQEQRSPISRSLSRRRSFRYEVFNTDDRGWTSLHIGARKGDLKEVKRLLNDGMDVNAIA 99

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GACGWTPLH+AAKERRKEAVKF
Sbjct: 100 WGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGACGWTPLHTAAKERRKEAVKF 159

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEE+KRL   N SS ETSCSSES
Sbjct: 160 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEMKRLHHDNCSSGETSCSSES 212

[Close]

BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A1S3BSK3|A0A1S3BSK3_CUCME (ankyrin-3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493066 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.5e-57
Identity = 152/173 (87.86%), Postives = 156/173 (90.17%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60
           MPQEQR  +SRSLSRRRSFR EV N DDRGWTSLHIGARKGDLKEVKRLLN+GMDVN   
Sbjct: 1   MPQEQRSPISRSLSRRRSFRYEVFNTDDRGWTSLHIGARKGDLKEVKRLLNDGMDVNAIA 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GACGWTPLH+AAKERRKEAVKF
Sbjct: 61  WGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGACGWTPLHTAAKERRKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEE+KRL   N SS ETSCSSES
Sbjct: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEMKRLHHDNCSSGETSCSSES 173

[Close]

BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A2P5FA42|A0A2P5FA42_9ROSA (Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_094380 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.2e-49
Identity = 104/171 (60.82%), Postives = 118/171 (69.01%), Query Frame = 0


Query: 3   QEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXXXX 62
           Q+Q G++ R+LSRRRSFR+ V  RDDRGWT LHIGARKGD+K+VKRLL++GMDVN     
Sbjct: 5   QDQDGALRRNLSRRRSFRSGV-GRDDRGWTLLHIGARKGDIKQVKRLLDDGMDVNVPAWG 64

Query: 63  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKFLV 122
                                               GACGWTPLH+AAKERR+EAVKFLV
Sbjct: 65  PKSQGVTPLHLAAEGGHLIVMDELLERGANIDARTKGACGWTPLHNAAKERRREAVKFLV 124

Query: 123 ENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           ENGAFLP DINDCRFNPPLHYCPGLEWAYEE++RLQ  + SS ETS SSES
Sbjct: 125 ENGAFLPPDINDCRFNPPLHYCPGLEWAYEELERLQQESSSSGETSYSSES 174

[Close]

BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A1R3JFX4|A0A1R3JFX4_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16707 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 9.4e-49
Identity = 135/173 (78.03%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60
           MPQEQ   + RSLSRRRSFR  V +RDDRGWT LHIGARKGDL +VK+LLNEG+DVN   
Sbjct: 1   MPQEQ--CLRRSLSRRRSFRGSV-DRDDRGWTMLHIGARKGDLHQVKQLLNEGVDVNVAA 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GACGWTPLH+AAKER+KEAVKF
Sbjct: 61  WGPKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGACGWTPLHAAAKERKKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           L+ENGAFLPDD+NDCRFNPPLHYCPGLEWAYEE+KR++  N ++ ETS SSES
Sbjct: 121 LIENGAFLPDDMNDCRFNPPLHYCPGLEWAYEEMKRIKRENSTAGETSYSSES 170

[Close]

BLAST of Carg11436 vs. TrEMBL
Match: tr|A0A1R3J995|A0A1R3J995_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07137 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.7e-48
Identity = 135/173 (78.03%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MPQEQRGSMSRSLSRRRSFRNEVLNRDDRGWTSLHIGARKGDLKEVKRLLNEGMDVNXXX 60
           MPQEQ   + RSLSRRRSFR  V +RDDRGWT LHIGARKGDL +VK+LLNEG+DVN   
Sbjct: 1   MPQEQ--CLRRSLSRRRSFRGAV-DRDDRGWTMLHIGARKGDLNQVKQLLNEGVDVNVAA 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACGWTPLHSAAKERRKEAVKF 120
               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GACGWTPLH+AAKER+KEAVKF
Sbjct: 61  WGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGACGWTPLHAAAKERKKEAVKF 120

Query: 121 LVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEVKRLQLYNGSSSETSCSSES 174
           L+ENGAFLPDD+NDCRFNPPLHYCPGLEWAYEE+KR++  N ++ E S SSES
Sbjct: 121 LIENGAFLPDDMNDCRFNPPLHYCPGLEWAYEEMKRIKRENSTAGEMSYSSES 170

The following BLAST results are available for this feature:

BLAST of Carg11436 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931271.1	2.8e-65	99.42	phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 [Cucurbita mosc...	[more]
XP_022931269.1	2.8e-65	99.42	phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita mosc...	[more]
XP_023552739.1	2.8e-65	98.27	phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Cucurbita pepo...	[more]
XP_023552740.1	2.8e-65	98.27	phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 [Cucurbita pepo...	[more]
XP_022985439.1	1.1e-64	98.27	phytochrome-interacting ankyrin-repeat protein 2-like [Cucurbita maxima]	[more]

BLAST of Carg11436 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61230.1	1.8e-37	75.33	Ankyrin repeat family protein	[more]
AT5G07840.1	6.2e-22	58.38	Ankyrin repeat family protein	[more]

BLAST of Carg11436 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FNP4\|PIA2_ARATH	3.2e-36	75.33	Phytochrome-interacting ankyrin-repeat protein 2 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9FF09\|PIA1_ARATH	1.1e-20	58.38	Phytochrome-interacting ankyrin-repeat protein 1 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Carg11436 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DYZ9\|A0A1S4DYZ9_CUCME	2.5e-57	87.86	ankyrin-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493066 PE=4 SV=1	[more]
tr\|A0A1S3BSK3\|A0A1S3BSK3_CUCME	2.5e-57	87.86	ankyrin-3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493066 PE=4 SV=1	[more]
tr\|A0A2P5FA42\|A0A2P5FA42_9ROSA	7.2e-49	60.82	Transmembrane protein OS=Trema orientalis OX=63057 GN=TorRG33x02_094380 PE=4 SV=...	[more]
tr\|A0A1R3JFX4\|A0A1R3JFX4_9ROSI	9.4e-49	78.03	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16707 PE=4 SV=1	[more]
tr\|A0A1R3J995\|A0A1R3J995_COCAP	4.7e-48	78.03	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07137 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf
IPR002110	Ankyrin_rpt

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11436-RA	Carg11436-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 117..131 score: 29.35 coord: 67..82 score: 46.35
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 101..134 e-value: 6.1E-4 score: 29.1 coord: 66..95 e-value: 2.9E-7 score: 40.1 coord: 29..58 e-value: 0.06 score: 22.5
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 29..61 score: 10.9
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 66..98 score: 15.628
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 101..126 score: 10.286
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	G3DSA:1.25.40.20		coord: 15..160 e-value: 3.0E-32 score: 113.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	SSF48403	Ankyrin repeat	coord: 25..144
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 34..126 e-value: 3.1E-18 score: 66.0
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 29..126 score: 31.245
IPR020683	Ankyrin repeat-containing domain	CDD	cd00204	ANK	coord: 26..144 e-value: 7.78172E-31 score: 109.01
None	No IPR available	PANTHER	PTHR45189	FAMILY NOT NAMED	coord: 1..173

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11436	Cla012834	Watermelon (97103) v1	carwmB0654
Carg11436	Csa4G055330	Cucumber (Chinese Long) v2	carcuB0677
Carg11436	MELO3C016255	Melon (DHL92) v3.5.1	carmeB0652
Carg11436	ClCG07G011320	Watermelon (Charleston Gray)	carwcgB0637
Carg11436	CSPI04G06660	Wild cucumber (PI 183967)	carcpiB0687
Carg11436	Cucsa.114710	Cucumber (Gy14) v1	carcgyB0731
Carg11436	CmaCh04G005820	Cucurbita maxima (Rimu)	carcmaB0927
Carg11436	CmoCh16G005720	Cucurbita moschata (Rifu)	carcmoB0898
Carg11436	CmoCh04G006220	Cucurbita moschata (Rifu)	carcmoB0902
Carg11436	Lsi07G007510	Bottle gourd (USVL1VR-Ls)	carlsiB596
Carg11436	Cp4.1LG01g01280	Cucurbita pepo (Zucchini)	carcpeB0929
Carg11436	Cp4.1LG14g02720	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11436	CsGy4G006600	Cucumber (Gy14) v2	carcgybB0652
Carg11436	MELO3C016255.2	Melon (DHL92) v3.6.1	carmedB0663
Carg11436	CsaV3_4G006880	Cucumber (Chinese Long) v3	carcucB0689
Carg11436	Cla97C07G138090	Watermelon (97103) v2	carwmbB0682

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11436	Carg13159	Silver-seed gourd	carcarB050

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11436	Silver-seed gourd	carcarB052
Carg11436	Cucurbita maxima (Rimu)	carcmaB0924
Carg11436	Wax gourd	carwgoB0770