Carg11332 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11332
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1
Location	Cucurbita_argyrosperma_scaffold_025 : 323943 .. 325258 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGTATATCCGTTCTCTATCCTTCTTCTCTGATCTCTGTTGAATCACTCAAATGGCGATGGCTTCACCTCTGGCCGTCAATGGAGTCAAGTTGGCTACGGCTTCTCTAGCTTATGTGGACACCAAGGCTGCAAACCATACGAAGGCTCTGATGGCGGAGCTTTCCCGCCAATTCTACGGCCTCCGATTGGTTTCCGGCCCCGCCGGTTGCATTTCCATCAAGGTTCACGACCACTCCATTCCCAAGGGACAACACACAGCCGCTTTGTCACATTCCGGTGAGAATTTCTCCATCTTCCTCTTTCTATTTCAGTTCTTCTGTTCCTTGGGAATGTGATTTTCCTTTAGTCTTTTTGGTGTAGAATTTGTTTGATTAAGGTTATTCCTTCTGCTTCAGTCTTTTTGGCTGTTTGTAACTGGCGTATGAATATGACTAGGCGTTGTTGTAATTCAAACTAGTGCTTGTAGGGAGGATATCCAATTTCCCCTTCTCTTTGCAGAAGAAGATGATCTTAATGGTTCACGCCATCAAGAACTATAGCATAAGATTACCTGTTTTTTTGTTTGGAAAGAGTATAAAGGGCTTTGAATTCACGGATTTAGATGAATTTTCTTTTGCTTTTGTTTGATTATACACAGGTGTTAAGAAGGAGCGAATGGTAGCGGAGGACACCTGCATGTTATCTTATGGTGGGTCAATCTTATATTCACCACCTCCAAAGCCATTTTCTCACAAGCTCCCGAACTGTTTGGATGGTGGACCTCTTTTTATGAAGGTACAGTTCCCTGTATAGAGTATAATCAACTTGTAATGAATAGAAAATACATAGTTATGCTATAAATGAGCTAATGTTCATATAAGCAATGTCTCCTATACCTCGAGACATTAACTTCATTGATCTTTGCATGATCGACCAACCTTTTTCGTTCTCATTTGATTGCCAAATCCATCCACCACAACCAAATTTGTGTTTCTTATTAGACACAGCAACAATAACTATTGTTGTGGCATTACTTTAAGTAAGGAGCAGGTTTTGTTTTGTTATTTTGCATCGTAAATCTCAAAATTATTCAGCATTGTATGTGCTTTTTCTTATCGTCCCGTTTTATTCGATAGAAACCTTCGAGTGAGAAGTTCCTTTGAGCTTTGTAGATGATGAAACCTCTGAGTTTATACAATTTCAAGAAATTGATTTCGAGTCTGTCTTGCTTTCGTTCGGTCTCAGTAATAATCAATAACTTAATTTTACAGGCTGATTGTTATCACTATCTCTTTGATGCTGCTATTAAGCTTCGTCAACTAGGCATTGATTAG

mRNA sequence

GAAGGTATATCCGTTCTCTATCCTTCTTCTCTGATCTCTGTTGAATCACTCAAATGGCGATGGCTTCACCTCTGGCCGTCAATGGAGTCAAGTTGGCTACGGCTTCTCTAGCTTATGTGGACACCAAGGCTGCAAACCATACGAAGGCTCTGATGGCGGAGCTTTCCCGCCAATTCTACGGCCTCCGATTGGTTTCCGGCCCCGCCGGTTGCATTTCCATCAAGGTTCACGACCACTCCATTCCCAAGGGACAACACACAGCCGCTTTGTCACATTCCGGTGTTAAGAAGGAGCGAATGGTAGCGGAGGACACCTGCATGTTATCTTATGGTGGGTCAATCTTATATTCACCACCTCCAAAGCCATTTTCTCACAAGCTCCCGAACTGTTTGGATGGTGGACCTCTTTTTATGAAGGCTGATTGTTATCACTATCTCTTTGATGCTGCTATTAAGCTTCGTCAACTAGGCATTGATTAG

Coding sequence (CDS)

ATGGCGATGGCTTCACCTCTGGCCGTCAATGGAGTCAAGTTGGCTACGGCTTCTCTAGCTTATGTGGACACCAAGGCTGCAAACCATACGAAGGCTCTGATGGCGGAGCTTTCCCGCCAATTCTACGGCCTCCGATTGGTTTCCGGCCCCGCCGGTTGCATTTCCATCAAGGTTCACGACCACTCCATTCCCAAGGGACAACACACAGCCGCTTTGTCACATTCCGGTGTTAAGAAGGAGCGAATGGTAGCGGAGGACACCTGCATGTTATCTTATGGTGGGTCAATCTTATATTCACCACCTCCAAAGCCATTTTCTCACAAGCTCCCGAACTGTTTGGATGGTGGACCTCTTTTTATGAAGGCTGATTGTTATCACTATCTCTTTGATGCTGCTATTAAGCTTCGTCAACTAGGCATTGATTAG

Protein sequence

MAMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHDHSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFMKADCYHYLFDAAIKLRQLGID

Homology

[Close]

BLAST of Carg11332 vs. NCBI nr
Match: XP_022923008.1 (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X3 [Cucurbita moschata])

HSP 1 Score: 242.3 bits (617), Expect = 1.0e-60
Identity = 119/121 (98.35%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MAMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHD 60
           MAMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHD
Sbjct: 1   MAMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHD 60

Query: 61  HSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFM 120
           HSIPKGQHT ALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLP CLDGGPLFM
Sbjct: 61  HSIPKGQHTVALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPYCLDGGPLFM 120

Query: 121 K 122
           K
Sbjct: 121 K 121

[Close]

BLAST of Carg11332 vs. NCBI nr
Match: XP_022984417.1 (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Cucurbita maxima] >XP_022984418.1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 112/121 (92.56%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHD 60
           MAMASPLAVNGVKLAT SLAYVDTKAAN+TKALMAELSRQFYGLRLVS PAG I+IKVHD
Sbjct: 1   MAMASPLAVNGVKLATTSLAYVDTKAANNTKALMAELSRQFYGLRLVSSPAGSIAIKVHD 60

Query: 61  HSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFM 120
           HSIPKGQHT +LSHSGVKKERM+AEDTCMLSYGGSILYSPPPKPFSHKLPNCLDG PLFM
Sbjct: 61  HSIPKGQHTISLSHSGVKKERMLAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGRPLFM 120

Query: 121 K 122
           K
Sbjct: 121 K 121

[Close]

BLAST of Carg11332 vs. NCBI nr
Match: XP_023551888.1 (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Cucurbita pepo subsp. pepo] >XP_023551890.1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 3.4e-56
Identity = 114/121 (94.21%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 1   MAMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHD 60
           MAMASPLAVNGVKLATASLAYVDTKAAN+TKALMAELSRQFYGLRLVS PAG I+IKVHD
Sbjct: 1   MAMASPLAVNGVKLATASLAYVDTKAANNTKALMAELSRQFYGLRLVSRPAGSIAIKVHD 60

Query: 61  HSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFM 120
           HSIPKGQHT ALSHSGVKKERMVAEDT MLSYG SILYSPPPKPFSHKLPNCLDGGPLFM
Sbjct: 61  HSIPKGQHTVALSHSGVKKERMVAEDTSMLSYGVSILYSPPPKPFSHKLPNCLDGGPLFM 120

Query: 121 K 122
           K
Sbjct: 121 K 121

[Close]

BLAST of Carg11332 vs. NCBI nr
Match: XP_022923007.1 (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 218.0 bits (554), Expect = 2.0e-53
Identity = 112/134 (83.58%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 1   MAMASPLAVNGVKL-------------ATASLAYVDTKAANHTKALMAELSRQFYGLRLV 60
           MAMASPLAVNGVKL                    VDTKAANHTKALMAELSRQFYGLRLV
Sbjct: 1   MAMASPLAVNGVKLXXXXXXXXXXXXXXXXXXXXVDTKAANHTKALMAELSRQFYGLRLV 60

Query: 61  SGPAGCISIKVHDHSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSH 120
           SGPAGCISIKVHDHSIPKGQHT ALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSH
Sbjct: 61  SGPAGCISIKVHDHSIPKGQHTVALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSH 120

Query: 121 KLPNCLDGGPLFMK 122
           KLP CLDGGPLFMK
Sbjct: 121 KLPYCLDGGPLFMK 134

[Close]

BLAST of Carg11332 vs. NCBI nr
Match: XP_022923004.1 (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [Cucurbita moschata] >XP_022923005.1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [Cucurbita moschata] >XP_022923006.1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 213.0 bits (541), Expect = 6.6e-52
Identity = 112/147 (76.19%), Postives = 112/147 (76.19%), Query Frame = 0


Query: 1   MAMASPLAVNGVKL--------------------------ATASLAYVDTKAANHTKALM 60
           MAMASPLAVNGVKL                                 VDTKAANHTKALM
Sbjct: 1   MAMASPLAVNGVKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTKAANHTKALM 60

Query: 61  AELSRQFYGLRLVSGPAGCISIKVHDHSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGG 120
           AELSRQFYGLRLVSGPAGCISIKVHDHSIPKGQHT ALSHSGVKKERMVAEDTCMLSYGG
Sbjct: 61  AELSRQFYGLRLVSGPAGCISIKVHDHSIPKGQHTVALSHSGVKKERMVAEDTCMLSYGG 120

Query: 121 SILYSPPPKPFSHKLPNCLDGGPLFMK 122
           SILYSPPPKPFSHKLP CLDGGPLFMK
Sbjct: 121 SILYSPPPKPFSHKLPYCLDGGPLFMK 147

[Close]

BLAST of Carg11332 vs. TAIR10
Match: AT5G53850.2 (haloacid dehalogenase-like hydrolase family protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 54/116 (46.55%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 7   LAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHDHSIPKG 66
           +AV    +     AY++ K    T +L+ EL R FY    VSG  G I++KVHD SIPK 
Sbjct: 1   MAVAAAAMIGLPQAYLEGKEVKETSSLVTELCRHFYTQGWVSGTGGSITMKVHDASIPKP 60

Query: 67  QHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFMKA 123
           +    +S SGV+KERM  ED  +LS  GSI+ +P PKP+ +K P C D  PLFMKA
Sbjct: 61  EQLIVMSPSGVQKERMQPEDMYILSANGSIISTPSPKPYPNKPPKCTDCAPLFMKA 116

HSP 2 Score: 43.5 bits (101), Expect = 1.2e-04
Identity = 17/21 (80.95%), Postives = 20/21 (95.24%), Query Frame = 0


Query: 121 KADCYHYLFDAAIKLRQLGID 142
           +A+CYHYLFDAAIKL QLG+D
Sbjct: 217 QAECYHYLFDAAIKLHQLGLD 237

[Close]

BLAST of Carg11332 vs. Swiss-Prot
Match: sp|E0CSI1|MTBC1_VITVI (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 OS=Vitis vinifera OX=29760 GN=VIT_19s0014g02480 PE=3 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 2.9e-27
Identity = 62/115 (53.91%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 8   AVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHDHSIPKGQ 67
           A+NG+K+A  S AY+++   N T+ L+++L R FYGL  VSG  G I+IKVHD SIPK Q
Sbjct: 5   ALNGLKMAATSQAYLESMPVNDTRKLLSDLCRHFYGLGWVSGTGGSITIKVHDESIPKPQ 64

Query: 68  HTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFMKA 123
               +S SGV+KERMV ED  +LS  G  L SP PKP+ +K P C D  PLFMKA
Sbjct: 65  QLIVMSPSGVQKERMVPEDMYVLSPSGCFLSSPSPKPYPNKPPKCSDCAPLFMKA 119

[Close]

BLAST of Carg11332 vs. Swiss-Prot
Match: sp|B9SQI7|MTBC_RICCO (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Ricinus communis OX=3988 GN=RCOM_0591060 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 2   AMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHDH 61
           A A  +AVNG  +  AS AY+++KA   T+ L+++L RQFY L  VSG  G I+IKVHD 
Sbjct: 4   AAAPAVAVNG-GVKVASQAYLESKAVKETRVLISDLCRQFYNLGWVSGTGGSITIKVHDD 63

Query: 62  SIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFMK 121
           SIPK      +S SGV+KERM  ED  +L+  GSIL SP PKP+ HK P C D GPLF+K
Sbjct: 64  SIPKPNQLILMSPSGVQKERMEPEDMYVLAANGSILSSPSPKPYPHKPPKCSDCGPLFLK 123

Query: 122 A 123
           A
Sbjct: 124 A 123

[Close]

BLAST of Carg11332 vs. Swiss-Prot
Match: sp|B9N1F9|MTBC_POPTR (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Populus trichocarpa OX=3694 GN=POPTR_0001s40980g PE=3 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 3.6e-25
Identity = 66/126 (52.38%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 1   MAMASP-LAVNGVKLA---TASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISI 60
           MA A P +AVNG  +A    AS AY+++KA   T+ L+A+L +QFY L  VSG  G I+I
Sbjct: 1   MAAAPPAVAVNGGGMAAAKVASQAYLESKAVKDTRVLIADLCKQFYTLGWVSGTGGSITI 60

Query: 61  KVHDHSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGG 120
           K HD SIPK Q    +S SGV+KERM  ED  +L+  GSIL SP PKP+ +K P C D  
Sbjct: 61  KAHDDSIPKRQQLILMSPSGVQKERMEPEDMYVLATNGSILSSPSPKPYPYKPPKCSDCA 120

Query: 121 PLFMKA 123
           PLF+KA
Sbjct: 121 PLFLKA 126

[Close]

BLAST of Carg11332 vs. Swiss-Prot
Match: sp|E0CTF3|MTBC2_VITVI (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 2 OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03470 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-21
Identity = 58/115 (50.43%), Postives = 72/115 (62.61%), Query Frame = 0


Query: 9   VNGVKL-ATASLA-YVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHDHSIPKG 68
           VNG ++  TAS A Y++T+     + L +EL R  Y L   SG  G I+IKVHD SIPK 
Sbjct: 12  VNGNEVGTTASFAGYMETRGVREARVLASELCRHMYTLGWFSGTGGSITIKVHDDSIPKP 71

Query: 69  QHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFMK 122
           +    +S SGV+KERMV ED  +LS  G IL +PP KP+ HK P C D  PLFMK
Sbjct: 72  RQLVVISPSGVQKERMVPEDMYVLSSDGFILSTPPLKPYPHKPPKCTDCTPLFMK 126

[Close]

BLAST of Carg11332 vs. Swiss-Prot
Match: sp|Q9FN41|MTBC_ARATH (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Arabidopsis thaliana OX=3702 GN=At5g53850 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-21
Identity = 54/116 (46.55%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 7   LAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHDHSIPKG 66
           +AV    +     AY++ K    T +L+ EL R FY    VSG  G I++KVHD SIPK 
Sbjct: 1   MAVAAAAMIGLPQAYLEGKEVKETSSLVTELCRHFYTQGWVSGTGGSITMKVHDASIPKP 60

Query: 67  QHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFMKA 123
           +    +S SGV+KERM  ED  +LS  GSI+ +P PKP+ +K P C D  PLFMKA
Sbjct: 61  EQLIVMSPSGVQKERMQPEDMYILSANGSIISTPSPKPYPNKPPKCTDCAPLFMKA 116

[Close]

BLAST of Carg11332 vs. TrEMBL
Match: tr|A0A1S3C2D2|A0A1S3C2D2_CUCME (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496078 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.5e-40
Identity = 88/121 (72.73%), Postives = 98/121 (80.99%), Query Frame = 0


Query: 1   MAMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHD 60
           MAMAS L ++GVKLAT S AY++TKAAN TKAL++ELSRQFY LR VSG    I+IKVHD
Sbjct: 1   MAMASALPLSGVKLATTSQAYMETKAANDTKALLSELSRQFYTLRCVSGTGSSIAIKVHD 60

Query: 61  HSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFM 120
           HSIP+ Q   A+S SGVKK RMV EDT MLS GGSIL+SPPPKPFSHKLPNC D  PLFM
Sbjct: 61  HSIPRRQQLIAMSLSGVKKRRMVREDTYMLSSGGSILHSPPPKPFSHKLPNCFDSRPLFM 120

Query: 121 K 122
           K
Sbjct: 121 K 121

[Close]

BLAST of Carg11332 vs. TrEMBL
Match: tr|A0A1S3C1U6|A0A1S3C1U6_CUCME (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496078 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.5e-40
Identity = 88/121 (72.73%), Postives = 98/121 (80.99%), Query Frame = 0


Query: 1   MAMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHD 60
           MAMAS L ++GVKLAT S AY++TKAAN TKAL++ELSRQFY LR VSG    I+IKVHD
Sbjct: 1   MAMASALPLSGVKLATTSQAYMETKAANDTKALLSELSRQFYTLRCVSGTGSSIAIKVHD 60

Query: 61  HSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFM 120
           HSIP+ Q   A+S SGVKK RMV EDT MLS GGSIL+SPPPKPFSHKLPNC D  PLFM
Sbjct: 61  HSIPRRQQLIAMSLSGVKKRRMVREDTYMLSSGGSILHSPPPKPFSHKLPNCFDSRPLFM 120

Query: 121 K 122
           K
Sbjct: 121 K 121

[Close]

BLAST of Carg11332 vs. TrEMBL
Match: tr|A0A0A0LAF4|A0A0A0LAF4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G233480 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.7e-38
Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 1   MAMASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHD 60
           MAMAS +A+N +KLA+ S A ++ KAAN TKAL+++LSRQFY LR VSG    I+IKVHD
Sbjct: 1   MAMASAMALNPLKLASTSQACLEKKAANDTKALLSDLSRQFYTLRCVSGTGSSIAIKVHD 60

Query: 61  HSIPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFM 120
           HSIP+ Q   A S SGVKK RMV EDT MLSYGGSILYSPPPKPFSHKLPNC D  PLFM
Sbjct: 61  HSIPRRQQLIATSLSGVKKRRMVREDTYMLSYGGSILYSPPPKPFSHKLPNCFDSRPLFM 120

Query: 121 K 122
           K
Sbjct: 121 K 121

[Close]

BLAST of Carg11332 vs. TrEMBL
Match: tr|A0A2P5AU72|A0A2P5AU72_PARAD (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Parasponia andersonii OX=3476 GN=PanWU01x14_300080 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-29
Identity = 70/119 (58.82%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 3   MASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHDHS 62
           MA+  AVNGVKL T S AY+++KA N T+AL+++L R FY L  VSG  G I+IKVHD S
Sbjct: 1   MAAAAAVNGVKLGTTSQAYLESKAVNDTRALLSDLCRHFYTLGWVSGTGGSITIKVHDDS 60

Query: 63  IPKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFMK 122
           IPK Q    +S SGV+KERMV ED  +LS  GS+L +P PKP+ HK P C D GPLFMK
Sbjct: 61  IPKPQQLVVMSPSGVQKERMVPEDMYILSPNGSVLSAPSPKPYPHKPPKCSDCGPLFMK 119

[Close]

BLAST of Carg11332 vs. TrEMBL
Match: tr|A0A2P5FZI1|A0A2P5FZI1_9ROSA (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Trema orientalis OX=63057 GN=TorRG33x02_012560 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.8e-29
Identity = 69/118 (58.47%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 4   ASPLAVNGVKLATASLAYVDTKAANHTKALMAELSRQFYGLRLVSGPAGCISIKVHDHSI 63
           A+  AVNGVKL T S AY+++KA N T+AL+++L R FY L  VSG  G I+IKVHD SI
Sbjct: 3   AAAAAVNGVKLGTTSQAYLESKAVNDTRALLSDLCRHFYTLGWVSGTGGSITIKVHDDSI 62

Query: 64  PKGQHTAALSHSGVKKERMVAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGGPLFMK 122
           PK Q    +S SGV+KERMV ED  +LS  GS+L +P PKP+ HK P C D GPLFMK
Sbjct: 63  PKPQQLIVMSPSGVQKERMVPEDMYILSPNGSVLSAPSPKPYPHKPPKCSDCGPLFMK 120

The following BLAST results are available for this feature:

BLAST of Carg11332 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923008.1	1.0e-60	98.35	probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
XP_022984417.1	2.0e-56	92.56	probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
XP_023551888.1	3.4e-56	94.21	probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
XP_022923007.1	2.0e-53	83.58	probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
XP_022923004.1	6.6e-52	76.19	probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]

BLAST of Carg11332 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53850.2	1.7e-22	46.55	haloacid dehalogenase-like hydrolase family protein	[more]

BLAST of Carg11332 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|E0CSI1\|MTBC1_VITVI	2.9e-27	53.91	Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
sp\|B9SQI7\|MTBC_RICCO	1.1e-26	53.72	Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
sp\|B9N1F9\|MTBC_POPTR	3.6e-25	52.38	Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
sp\|E0CTF3\|MTBC2_VITVI	1.8e-21	50.43	Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
sp\|Q9FN41\|MTBC_ARATH	3.1e-21	46.55	Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]

BLAST of Carg11332 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C2D2\|A0A1S3C2D2_CUCME	6.5e-40	72.73	probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
tr\|A0A1S3C1U6\|A0A1S3C1U6_CUCME	6.5e-40	72.73	probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
tr\|A0A0A0LAF4\|A0A0A0LAF4_CUCSA	2.7e-38	70.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G233480 PE=4 SV=1	[more]
tr\|A0A2P5AU72\|A0A2P5AU72_PARAD	2.3e-29	58.82	Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]
tr\|A0A2P5FZI1\|A0A2P5FZI1_9ROSA	8.8e-29	58.47	Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phospha...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0019509	L-methionine biosynthetic process from methylthioadenosine

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR017714	MethylthioRu-1-P_deHdtase_MtnB
IPR001303	Aldolase_II/adducin_N
IPR036409	Aldolase_II/adducin_N_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019509	L-methionine biosynthetic process from methylthioadenosine
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11332-RA	Carg11332-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036409	Class II aldolase/adducin N-terminal domain superfamily	GENE3D	G3DSA:3.40.225.10		coord: 26..110 e-value: 2.8E-9 score: 38.7
IPR036409	Class II aldolase/adducin N-terminal domain superfamily	SUPERFAMILY	SSF53639	AraD/HMP-PK domain-like	coord: 28..104
IPR001303	Class II aldolase/adducin N-terminal	PFAM	PF00596	Aldolase_II	coord: 33..103 e-value: 1.6E-5 score: 24.9
IPR017714	Methylthioribulose-1-phosphate dehydratase	PANTHER	PTHR10640	APAF1-INTERACTING PROTEIN	coord: 13..122

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11332	CsGy3G019340	Cucumber (Gy14) v2	carcgybB0650

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11332	Cucumber (Gy14) v1	carcgyB0730
Carg11332	Cucurbita maxima (Rimu)	carcmaB0924
Carg11332	Cucurbita maxima (Rimu)	carcmaB0925
Carg11332	Cucurbita moschata (Rifu)	carcmoB0898
Carg11332	Cucurbita moschata (Rifu)	carcmoB0899
Carg11332	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11332	Cucurbita pepo (Zucchini)	carcpeB0927
Carg11332	Wild cucumber (PI 183967)	carcpiB0685
Carg11332	Wild cucumber (PI 183967)	carcpiB0688
Carg11332	Cucumber (Chinese Long) v2	carcuB0675
Carg11332	Cucumber (Chinese Long) v3	carcucB0687
Carg11332	Cucumber (Chinese Long) v3	carcucB0690
Carg11332	Bottle gourd (USVL1VR-Ls)	carlsiB595
Carg11332	Melon (DHL92) v3.5.1	carmeB0651
Carg11332	Melon (DHL92) v3.6.1	carmedB0661
Carg11332	Watermelon (Charleston Gray)	carwcgB0635
Carg11332	Watermelon (Charleston Gray)	carwcgB0636
Carg11332	Watermelon (97103) v1	carwmB0655
Carg11332	Watermelon (97103) v2	carwmbB0680
Carg11332	Watermelon (97103) v2	carwmbB0681
Carg11332	Wax gourd	carwgoB0771
Carg11332	Wax gourd	carwgoB0772
Carg11332	Silver-seed gourd	carcarB051
Carg11332	Cucumber (Gy14) v2	carcgybB0653