Carg11146 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11146
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ribosomal protein L19
Location	Cucurbita_argyrosperma_scaffold_013 : 176426 .. 180066 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTCGTATATAAATATCGCAATAATTAATCGCGCGGTTCTCTGGGATTTCAGCAGCGCGAAGGAGGTTTAGAGAAATGGTTTCGCTCAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTCAAGTGCGGCAGAGGCAAGGTCTGGCTGGATCCTAATGAAGTCAATGAAATCTCTATGGCGAATTCTCGTACGTTCCCTTTTCTCTGTACTCTTCAGTATGAACTTCGTATTTTGTTTGGTTCTTTTCTTATTGGGGACTTGTTGGGTTTTGAATTTGGTCTGCTTGTTTATTGAGTTGCTCTTATTTGCTAGATATCGTAGGGAGTTTGTTGTTTAATTTGGTTAGTATCCGTGAGCTGTTGGGTTGGGTTTTAATTTTGATCTGCTTGATTGGGATACGATTTGTTAACGAACATTCGGCTGAACTTTTTTGGTTTCATGAAATTATTTAATTACCTACGCATTGTTTTTGCGATGTCTTTTTTCAACTATATACTGCTTTTTGCTTGAATCGTAGTCCAAATCATTTAGTATGTGTGCTCGATTTCTTTTTTCTATTTGTTGTTTTTTGTTAATTGAAGGGCGTTTGTTGGTTGCAGGTCAAAACGTTAGGAAGTTGGTGAAAGATGGGTTCATTATCAGGAAACCAACAAAGATTCACTCTCGTTCCCGTGCTCGCCGAATGAAGGAGGCTAAGAGGAAGGGACGTCACTCAGGATACGGTATTTTTCTTTTGAGTCCTGCTAGTTTGATTCGTGAAGAATACGCTTATATTCGTACAGAGTGCCGGTCTTGATTGCAGGACATGGAAACTTTATTAAGTGATGTGGAAGCTCAAATTAGGATCCTTCTGTAGAGAAATTGAAGATAAGAAGTATAAAACTATATTTTATATACTTTTCCAGCCTAAAGAACAAAGGGTATATAGTTATTAGATTTTACTCGATAAAGCCTATGGAGTTGCGTAGGCAGATATGTACAATGGTATCAAGGTGAATGCTCTCCTAAGTCTTTTAGGTGAAGAATTGTCTGTCTTTCTGTATATTTGTCACTGTATTGCAGTTGTTAAATGTCTTTTCTATGGGTAAATATGATTTATCATTTGATAGGGAATGCCTTTTCTGTATATTTGTCACTGTATTGCAGTTGTTAAATGTCTTTTCTATGGGTAAATATGATTTATCATTTGATAGGGAATGCCTTTTCTGTATGTTCTGACATCTGTGCATTTCTTGCCCATATTATATCATCATAATTATCACTGAATTTTCAAGTGAAGTGCTTTTATGATCCTTTGTCACTAATTATGTATGTTGCACATAGGTAAGCGTAAGGGTACCAGGGAGGCTAGATTACCCACCAAGATTCTCTGGATGAGGAGGATGCGTGTCCTGAGGAGATTACTCCGCAAGTACAGGGAATCCAAAAAGATCGACAAACACATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTGTGCTGATGGAGAGTATCCACAAATCAAAGGCTGAGAAGGCAAGAGAGAAGACATTATCCGATCAATTTGAGGCAAAGAGAGCAAAGAACAAGGCTAGTAGGGAAAGAAAGTTCGCCAGAAGAGAGGAACGGTTAGCCCAGGTAATCAATCACTTCAGTCCAAATTGTTCTTCAATACGTATCATATTCTTGAATCTGCTTCTTCATTCATAAAGCTCCATGTCAGAATATTGACTTGGTCTTGACGTTTAGGGTCCTGGAGAAAAACCAGCCGCCGCTGCCCCAGTTGCTGCGTCTCAACCCACTCAGTAAGTATTTATGTCTTAATTTAAGTTGAGATAATTAGATAGCTATTTTATATATTATAAACCAATCTTCTTGCTCTTGCAGGGTATCAAAAAAAGCAAAGAAGTGAACTTTTGATTGTTCGTAGATCCTCGACTACTGTACTGGTTTTGACCACTTTTGTTGTTTTTCTTGTCTTGGACAAATTTCCTTGTTATCAAAATCCCAGACGAATAGAGATTTACATCTATAATTTTTCTAATTTATCAATCGTTCCATCTTTGGGTTCTTTTTATTCTATAAATTGCTTGATTCTCACAAGCCTTGTTGGACCCTTTTTTACATACAAGTTTTTCCGGGTGAAAAATATCTTATGTCTGAATTGCATCCATTAAATACTTGAGACCTTTGAAACTTCAATCATCGATTGGTTTGTTTTGAAGGCCTAGGTTTTGCCGGTAGAGAAAAGGAACAATTGTGAATCCCCGAGCACCGTACTGCTCTTACTGCGCTCTTTATCCGTTGTTTTTGCTAATAATTGTCGTCCAAATTGGCTTATTGAGCATGATCTTCCATGATGGAAAGAACAAATGAATTGTTAAAATGGGGATCCCACGTATAATGTGGGTGTCTGACGAAAATTTCTCTGCTCGTCATAGGTCCAACACTTTGATGATAAAAATCTGATACATTTTCCAGGTTTAGTCATTGATGAGCATCATTTTGCAGGTTTCTGCCCTTCTAGAGATGTTCTAATTTTTTTTCTCCGTGGAGGTAGGTCCAAGTAAAATGCCGTGGCAGCTGAAAATCGCCCCTACTTCCATTTGTATTACATTGTACGAATGTGTCCCACCCATACACAAAGATATTATCATTCCTAGCTTTAACCTGGAACTGTGTAATCAGGCAACATGGGTTGTCATTGTTTTCTGGCTCCTTGCTATATATACTCCCCATCCGGCAGGATCAAAGAGACCAACTTGTGAATATTGAATCCCAACTGAGAATTGACTTCATTTATCTTGGAAGACTGGTAGGCCTCACCGTTTATTTTATCAGTTTGGGACTTCAAACTGAAAGGTCCATAACTAGGAAGCTCGTGCCAAGCTTCTGAAACCTGAACATTGGTTCTCCATTCCCTGCAACTCTATCTTGCTCATTCAAATCTTTGTTCAGTTGTCAATAAGTTGTTTGTCCTCAGTTGAGCTATGAAAATTATATATATGTATGGATGTGTGTATATACATGTATCAGTTTACATTCTGAAACGTTCATTTGATAAGATAAACTAGTGCTCCTCTTATTTAGAGTCGTAATTACATTTTAGATATCCACAGTATAATCGGCACTCGATGATGATTCTAAAGAAAACACTGACGTTTATTCAACTACTTGCACTATAAGATGACAGCCAATAAGTTGGGCTCAAACGGCCTATTGATTAATAATGTCATATTTTTCCCCTTAAAGTGAGAAAAAAAAAAAATCTCAACGAGATTCAATAATGGGTACACAAGAACCAATGTCCCCAAAATAAATTATTAATTCTTTTTCCGTAAGAAAATTTCTGGACAATATTTTGAAAGTAGAAGAGGAATGACCACGATTTCCGCCGAACATACAAAGCACAACCTGAGAGATCTTCTCTGTCGTGTCTTTATTAACCACTTCAATCCTCATAAAAATGGGCATTCTTTTTCCTTTAAGGAGAAGAATGAGAGTGTCTAAAAATGATTTTGATGAAACAATGATCCAAACACAGAAGGGCTATTTAGCTTTACTAATCAGATGGACCAATCATTTTCTCAGGCACCACATATTTATTAAAATCTTCCTCGCTTAAAACTCCGAGCTTCAGT

mRNA sequence

TGTTCGTATATAAATATCGCAATAATTAATCGCGCGGTTCTCTGGGATTTCAGCAGCGCGAAGGAGGTTTAGAGAAATGGTTTCGCTCAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTCAAGTGCGGCAGAGGCAAGGTCTGGCTGGATCCTAATGAAGTCAATGAAATCTCTATGGCGAATTCTCGTCAAAACGTTAGGAAGTTGGTGAAAGATGGGTTCATTATCAGGAAACCAACAAAGATTCACTCTCGTTCCCGTGCTCGCCGAATGAAGGAGGCTAAGAGGAAGGGACGTCACTCAGGATACGGTAAGCGTAAGGGTACCAGGGAGGCTAGATTACCCACCAAGATTCTCTGGATGAGGAGGATGCGTGTCCTGAGGAGATTACTCCGCAAGTACAGGGAATCCAAAAAGATCGACAAACACATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTGTGCTGATGGAGAGTATCCACAAATCAAAGGCTGAGAAGGCAAGAGAGAAGACATTATCCGATCAATTTGAGGCAAAGAGAGCAAAGAACAAGGCTAGTAGGGAAAGAAAGTTCGCCAGAAGAGAGGAACGGTTAGCCCAGGGTCCTGGAGAAAAACCAGCCGCCGCTGCCCCAGTTGCTGCGTCTCAACCCACTCAGGTATCAAAAAAAGCAAAGAAGTGAACTTTTGATTGTTCGTAGATCCTCGACTACTGTACTGGTTTTGACCACTTTTGTTGTTTTTCTTGTCTTGGACAAATTTCCTTGTTATCAAAATCCCAGACGAATAGAGATTTACATCTATAATTTTTCTAATTTATCAATCGTTCCATCTTTGGGTTCTTTTTATTCTATAAATTGCTTGATTCTCACAAGCCTTGTTGGACCCTTTTTTACATACAAGTTTTTCCGGGTGAAAAATATCTTATGTCTGAATTGCATCCATTAAATACTTGAGACGCCTAGGTTTTGCCGGTAGAGAAAAGGAACAATTGTGAATCCCCGAGCACCGTACTGCTCTTACTGCGCTCTTTATCCGTTGTTTTTGCTAATAATTGTCGTCCAAATTGGCTTATTGAGCATGATCTTCCATGATGGAAAGAACAAATGAATTGTTAAAATGGGGATCCCACGTATAATGTGGGTGTCTGACGAAAATTTCTCTGCTCGTCATAGGTCCAACACTTTGATGATAAAAATCTGATACATTTTCCAGGTTTAGTCATTGATGAGCATCATTTTGCAGGTTTCTGCCCTTCTAGAGATGTTCTAATTTTTTTTCTCCGTGGAGGTAGGTCCAAGTAAAATGCCGTGGCAGCTGAAAATCGCCCCTACTTCCATTTGTATTACATTGTACGAATGTGTCCCACCCATACACAAAGATATTATCATTCCTAGCTTTAACCTGGAACTGTGTAATCAGGCAACATGGGTTGTCATTGTTTTCTGGCTCCTTGCTATATATACTCCCCATCCGGCAGGATCAAAGAGACCAACTTGTGAATATTGAATCCCAACTGAGAATTGACTTCATTTATCTTGGAAGACTGGTAGGCCTCACCGTTTATTTTATCAGTTTGGGACTTCAAACTGAAAGGTCCATAACTAGGAAGCTCGTGCCAAGCTTCTGAAACCTGAACATTGGTTCTCCATTCCCTGCAACTCTATCTTGCTCATTCAAATCTTTGTTCAGTTGTCAATAAGTTGTTTGTCCTCAGTTGAGCTATGAAAATTATATATATGTATGGATGTGTGTATATACATGTATCAGTTTACATTCTGAAACGTTCATTTGATAAGATAAACTAGTGCTCCTCTTATTTAGAGTCGTAATTACATTTTAGATATCCACAGTATAATCGGCACTCGATGATGATTCTAAAGAAAACACTGACGTTTATTCAACTACTTGCACTATAAGATGACAGCCAATAAGTTGGGCTCAAACGGCCTATTGATTAATAATGTCATATTTTTCCCCTTAAAGTGAGAAAAAAAAAAAATCTCAACGAGATTCAATAATGGGTACACAAGAACCAATGTCCCCAAAATAAATTATTAATTCTTTTTCCGTAAGAAAATTTCTGGACAATATTTTGAAAGTAGAAGAGGAATGACCACGATTTCCGCCGAACATACAAAGCACAACCTGAGAGATCTTCTCTGTCGTGTCTTTATTAACCACTTCAATCCTCATAAAAATGGGCATTCTTTTTCCTTTAAGGAGAAGAATGAGAGTGTCTAAAAATGATTTTGATGAAACAATGATCCAAACACAGAAGGGCTATTTAGCTTTACTAATCAGATGGACCAATCATTTTCTCAGGCACCACATATTTATTAAAATCTTCCTCGCTTAAAACTCCGAGCTTCAGT

Coding sequence (CDS)

ATGGTTTCGCTCAAGCTTCAGAAGCGGCTTGCCGCTAGTGTTCTCAAGTGCGGCAGAGGCAAGGTCTGGCTGGATCCTAATGAAGTCAATGAAATCTCTATGGCGAATTCTCGTCAAAACGTTAGGAAGTTGGTGAAAGATGGGTTCATTATCAGGAAACCAACAAAGATTCACTCTCGTTCCCGTGCTCGCCGAATGAAGGAGGCTAAGAGGAAGGGACGTCACTCAGGATACGGTAAGCGTAAGGGTACCAGGGAGGCTAGATTACCCACCAAGATTCTCTGGATGAGGAGGATGCGTGTCCTGAGGAGATTACTCCGCAAGTACAGGGAATCCAAAAAGATCGACAAACACATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAACGTGTGCTGATGGAGAGTATCCACAAATCAAAGGCTGAGAAGGCAAGAGAGAAGACATTATCCGATCAATTTGAGGCAAAGAGAGCAAAGAACAAGGCTAGTAGGGAAAGAAAGTTCGCCAGAAGAGAGGAACGGTTAGCCCAGGGTCCTGGAGAAAAACCAGCCGCCGCTGCCCCAGTTGCTGCGTCTCAACCCACTCAGGTATCAAAAAAAGCAAAGAAGTGA

Protein sequence

MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKPAAAAPVAASQPTQVSKKAKK

Homology

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BLAST of Carg11146 vs. NCBI nr
Match: XP_022934250.1 (60S ribosomal protein L19-1-like [Cucurbita moschata])

HSP 1 Score: 382.9 bits (982), Expect = 7.1e-103
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGPGEKPAAAAPVAASQPTQVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 209

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BLAST of Carg11146 vs. NCBI nr
Match: XP_022984071.1 (60S ribosomal protein L19-1-like [Cucurbita maxima])

HSP 1 Score: 379.4 bits (973), Expect = 7.8e-102
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGR KVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRVKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGPGEKPAAAAPVAASQPTQVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 209

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BLAST of Carg11146 vs. NCBI nr
Match: XP_018818006.1 (PREDICTED: 60S ribosomal protein L19-1 [Juglans regia])

HSP 1 Score: 372.9 bits (956), Expect = 7.3e-100
Identity = 200/209 (95.69%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVW+DPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWIDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGPGEKP AA PVAASQPTQ +KK+KK
Sbjct: 181 LAQGPGEKPVAAPPVAASQPTQAAKKSKK 209

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BLAST of Carg11146 vs. NCBI nr
Match: XP_008454314.1 (PREDICTED: 60S ribosomal protein L19-3 [Cucumis melo])

HSP 1 Score: 372.5 bits (955), Expect = 9.6e-100
Identity = 203/209 (97.13%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGPGEKPAAAAPVA+SQ  QVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVASSQAPQVSKKAKK 209

[Close]

BLAST of Carg11146 vs. NCBI nr
Match: XP_022949365.1 (60S ribosomal protein L19-1 [Cucurbita moschata] >XP_023525734.1 60S ribosomal protein L19-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.2 bits (949), Expect = 4.8e-99
Identity = 204/209 (97.61%), Postives = 205/209 (98.09%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGPGEK A AAPVA+SQ TQVSKKAKK
Sbjct: 181 LAQGPGEKLAPAAPVASSQATQVSKKAKK 209

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BLAST of Carg11146 vs. TAIR10
Match: AT3G16780.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 325.1 bits (832), Expect = 3.2e-89
Identity = 177/209 (84.69%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGPG         A  QP    KK+KK
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEVTKKKSKK 209

[Close]

BLAST of Carg11146 vs. TAIR10
Match: AT1G02780.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 323.6 bits (828), Expect = 9.3e-89
Identity = 171/186 (91.94%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 187
           LA+GPG
Sbjct: 181 LAKGPG 186

[Close]

BLAST of Carg11146 vs. TAIR10
Match: AT4G02230.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 323.2 bits (827), Expect = 1.2e-88
Identity = 179/208 (86.06%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKPAAAAPVA--ASQPTQVSKK 207
           LA+GPG    AAAP A  A  P + SKK
Sbjct: 181 LAKGPGGDIPAAAPPAQTAEVPAKKSKK 208

[Close]

BLAST of Carg11146 vs. TAIR10
Match: AT4G16030.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 61.2 bits (147), Expect = 8.6e-10
Identity = 64/147 (43.54%), Postives = 76/147 (51.70%), Query Frame = 0


Query: 58  HSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRL----------LR 117
           HSRSRAR      RK RH+GYG  K T EA            R+++RL            
Sbjct: 7   HSRSRAR------RKCRHTGYG--KDTMEA----------LRRIMKRLTXXXXXXXXXXX 66

Query: 118 KYRESKKIDKHM-YHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 177
           K+  +KKIDK + YHDM+MKVKG V+KNK VLMES+HKS                     
Sbjct: 67  KFCWNKKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKS--------------------- 112

Query: 178 KASRERKFARREERLAQGP-GEKPAAA 193
             SRERKF+  E RLA  P GEK A+A
Sbjct: 127 --SRERKFSGSEMRLALEPEGEKTASA 112

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BLAST of Carg11146 vs. Swiss-Prot
Match: sp|Q9LUQ6|RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.7e-88
Identity = 177/209 (84.69%), Postives = 186/209 (89.00%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGPG         A  QP    KK+KK
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEVTKKKSKK 209

[Close]

BLAST of Carg11146 vs. Swiss-Prot
Match: sp|Q9SRX2|RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.7e-87
Identity = 171/186 (91.94%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG 187
           LA+GPG
Sbjct: 181 LAKGPG 186

[Close]

BLAST of Carg11146 vs. Swiss-Prot
Match: sp|P49693|RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 323.2 bits (827), Expect = 2.2e-87
Identity = 179/208 (86.06%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNE ++ISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKPAAAAPVA--ASQPTQVSKK 207
           LA+GPG    AAAP A  A  P + SKK
Sbjct: 181 LAKGPGGDIPAAAPPAQTAEVPAKKSKK 208

[Close]

BLAST of Carg11146 vs. Swiss-Prot
Match: sp|P36241|RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 9.2e-62
Identity = 121/165 (73.33%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           M SLKLQKRLAASVL+CG+ KVWLDPNE+NEI+  NSRQN+RKL+KDG II+KP  +HSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
            R R+  EA+RKGRH G+GKRKGT  AR+PTK+LWM+R RVLRRLL+KYR+SKKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 166
           HD+YMK KGNVFKNKRVLME IHK KAEK R K L+DQ EA+R K
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQK 165

[Close]

BLAST of Carg11146 vs. Swiss-Prot
Match: sp|Q3T0W9|RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-59
Identity = 117/165 (70.91%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CG+ KVWLDPNE NEI+ ANSRQ +RKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKRKGT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 166
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165

[Close]

BLAST of Carg11146 vs. TrEMBL
Match: tr|A0A2I4EF24|A0A2I4EF24_9ROSI (Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108989019 PE=3 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 4.9e-100
Identity = 200/209 (95.69%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVW+DPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWIDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGPGEKP AA PVAASQPTQ +KK+KK
Sbjct: 181 LAQGPGEKPVAAPPVAASQPTQAAKKSKK 209

[Close]

BLAST of Carg11146 vs. TrEMBL
Match: tr|A0A1S3BYB1|A0A1S3BYB1_CUCME (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494752 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 6.3e-100
Identity = 203/209 (97.13%), Postives = 206/209 (98.56%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGPGEKPAAAAPVA+SQ  QVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAPVASSQAPQVSKKAKK 209

[Close]

BLAST of Carg11146 vs. TrEMBL
Match: tr|A0A067JW78|A0A067JW78_JATCU (Ribosomal protein L19 OS=Jatropha curcas OX=180498 GN=JCGZ_13972 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 3.5e-98
Identity = 201/210 (95.71%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGP-GEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGP GEKP AA P AASQPT+ SKK+KK
Sbjct: 181 LAQGPGGEKPVAAPPAAASQPTEGSKKSKK 210

[Close]

BLAST of Carg11146 vs. TrEMBL
Match: tr|A0A2I4EZH0|A0A2I4EZH0_9ROSI (Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108994144 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 5.9e-98
Identity = 200/213 (93.90%), Postives = 205/213 (96.24%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVW+DPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWIDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMK AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKVAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPAAA----APVAASQPTQVSKKAKK 210
           LAQGPGEKPAAA     PV ASQPTQ +KK+KK
Sbjct: 181 LAQGPGEKPAAAPPASTPVTASQPTQTTKKSKK 213

[Close]

BLAST of Carg11146 vs. TrEMBL
Match: tr|A0A2C9VRX5|A0A2C9VRX5_MANES (Ribosomal protein L19 OS=Manihot esculenta OX=3983 GN=MANES_05G000100 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 5.9e-98
Identity = 199/210 (94.76%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQN+RKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGP-GEKPAAAAPVAASQPTQVSKKAKK 210
           LAQGP G+KP AA PVAASQPT++S+K+KK
Sbjct: 181 LAQGPGGDKPTAAPPVAASQPTEISRKSKK 210

The following BLAST results are available for this feature:

BLAST of Carg11146 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934250.1	7.1e-103	100.00	60S ribosomal protein L19-1-like [Cucurbita moschata]	[more]
XP_022984071.1	7.8e-102	99.52	60S ribosomal protein L19-1-like [Cucurbita maxima]	[more]
XP_018818006.1	7.3e-100	95.69	PREDICTED: 60S ribosomal protein L19-1 [Juglans regia]	[more]
XP_008454314.1	9.6e-100	97.13	PREDICTED: 60S ribosomal protein L19-3 [Cucumis melo]	[more]
XP_022949365.1	4.8e-99	97.61	60S ribosomal protein L19-1 [Cucurbita moschata] >XP_023525734.1 60S ribosomal p...	[more]

BLAST of Carg11146 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16780.1	3.2e-89	84.69	Ribosomal protein L19e family protein	[more]
AT1G02780.1	9.3e-89	91.94	Ribosomal protein L19e family protein	[more]
AT4G02230.1	1.2e-88	86.06	Ribosomal protein L19e family protein	[more]
AT4G16030.1	8.6e-10	43.54	Ribosomal protein L19e family protein	[more]

BLAST of Carg11146 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LUQ6\|RL192_ARATH	5.7e-88	84.69	60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1	[more]
sp\|Q9SRX2\|RL191_ARATH	1.7e-87	91.94	60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1	[more]
sp\|P49693\|RL193_ARATH	2.2e-87	86.06	60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3	[more]
sp\|P36241\|RL19_DROME	9.2e-62	73.33	60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2	[more]
sp\|Q3T0W9\|RL19_BOVIN	1.1e-59	70.91	60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1	[more]

BLAST of Carg11146 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I4EF24\|A0A2I4EF24_9ROSI	4.9e-100	95.69	Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108989019 PE=3 SV=1	[more]
tr\|A0A1S3BYB1\|A0A1S3BYB1_CUCME	6.3e-100	97.13	Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494752 PE=3 SV=1	[more]
tr\|A0A067JW78\|A0A067JW78_JATCU	3.5e-98	95.71	Ribosomal protein L19 OS=Jatropha curcas OX=180498 GN=JCGZ_13972 PE=3 SV=1	[more]
tr\|A0A2I4EZH0\|A0A2I4EZH0_9ROSI	5.9e-98	93.90	Ribosomal protein L19 OS=Juglans regia OX=51240 GN=LOC108994144 PE=3 SV=1	[more]
tr\|A0A2C9VRX5\|A0A2C9VRX5_MANES	5.9e-98	94.76	Ribosomal protein L19 OS=Manihot esculenta OX=3983 GN=MANES_05G000100 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0022625	cytosolic large ribosomal subunit
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR035970	60S_ribosomal_L19/L19e_sf
IPR033935	Ribosomal_L19_euka
IPR023638	Ribosomal_L19/L19e_CS
IPR015972	Ribosomal_L19/L19e_dom1
IPR000196	Ribosomal_L19/L19e

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11146-RA	Carg11146-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e	SMART	SM01416	Ribosomal_L19e_2	coord: 3..146 e-value: 7.3E-97 score: 337.8
IPR000196	Ribosomal protein L19/L19e	PFAM	PF01280	Ribosomal_L19e	coord: 4..146 e-value: 1.3E-66 score: 223.0
IPR000196	Ribosomal protein L19/L19e	HAMAP	MF_01475	Ribosomal_L19e	coord: 3..149 score: 20.592
None	No IPR available	GENE3D	G3DSA:1.10.1200.240		coord: 57..188 e-value: 2.3E-58 score: 198.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..184
None	No IPR available	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..209
None	No IPR available	PANTHER	PTHR10722:SF11	60S RIBOSOMAL PROTEIN L19-1-RELATED	coord: 1..209
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	G3DSA:1.10.1650.10		coord: 1..56 e-value: 5.7E-32 score: 111.2
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26
IPR033935	Ribosomal protein L19, eukaryotic	CDD	cd01417	Ribosomal_L19e_E	coord: 4..167 e-value: 2.28502E-75 score: 226.077
IPR035970	Ribosomal protein L19/L19e superfamily	SUPERFAMILY	SSF48140	Ribosomal protein L19 (L19e)	coord: 3..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11146	Cla017388	Watermelon (97103) v1	carwmB0816
Carg11146	Csa4G001980	Cucumber (Chinese Long) v2	carcuB0832
Carg11146	MELO3C017939	Melon (DHL92) v3.5.1	carmeB0813
Carg11146	ClCG10G011130	Watermelon (Charleston Gray)	carwcgB0792
Carg11146	CSPI04G01020	Wild cucumber (PI 183967)	carcpiB0854
Carg11146	Cucsa.096920	Cucumber (Gy14) v1	carcgyB0927
Carg11146	CmaCh14G009170	Cucurbita maxima (Rimu)	carcmaB1132
Carg11146	CmaCh01G003010	Cucurbita maxima (Rimu)	carcmaB1134
Carg11146	CmoCh14G009440	Cucurbita moschata (Rifu)	carcmoB1102
Carg11146	CmoCh17G010500	Cucurbita moschata (Rifu)	carcmoB1103
Carg11146	CmoCh01G003130	Cucurbita moschata (Rifu)	carcmoB1105
Carg11146	Lsi03G010930	Bottle gourd (USVL1VR-Ls)	carlsiB748
Carg11146	Cp4.1LG03g05260	Cucurbita pepo (Zucchini)	carcpeB1147
Carg11146	Cp4.1LG02g16400	Cucurbita pepo (Zucchini)	carcpeB1146
Carg11146	Cp4.1LG17g07240	Cucurbita pepo (Zucchini)	carcpeB1145
Carg11146	CsGy4G000900	Cucumber (Gy14) v2	carcgybB0806
Carg11146	MELO3C017939.2	Melon (DHL92) v3.6.1	carmedB0824
Carg11146	CsaV3_4G001000	Cucumber (Chinese Long) v3	carcucB0857
Carg11146	Cla97C10G194040	Watermelon (97103) v2	carwmbB0851
Carg11146	Bhi11G001037	Wax gourd	carwgoB0951

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11146	Carg07395	Silver-seed gourd	carcarB605

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11146	Watermelon (97103) v2	carwmbB0852
Carg11146	Wax gourd	carwgoB0953
Carg11146	Silver-seed gourd	carcarB133
Carg11146	Cucumber (Gy14) v2	carcgybB0802
Carg11146	Cucumber (Gy14) v2	carcgybB0807
Carg11146	Cucumber (Gy14) v1	carcgyB0929
Carg11146	Cucumber (Gy14) v1	carcgyB0932
Carg11146	Cucurbita maxima (Rimu)	carcmaB1133
Carg11146	Cucurbita maxima (Rimu)	carcmaB1136
Carg11146	Cucurbita moschata (Rifu)	carcmoB1107
Carg11146	Cucurbita pepo (Zucchini)	carcpeB1143
Carg11146	Wild cucumber (PI 183967)	carcpiB0850
Carg11146	Wild cucumber (PI 183967)	carcpiB0855
Carg11146	Cucumber (Chinese Long) v2	carcuB0829
Carg11146	Cucumber (Chinese Long) v2	carcuB0833
Carg11146	Cucumber (Chinese Long) v3	carcucB0853
Carg11146	Cucumber (Chinese Long) v3	carcucB0858
Carg11146	Melon (DHL92) v3.5.1	carmeB0810
Carg11146	Melon (DHL92) v3.6.1	carmedB0821
Carg11146	Watermelon (Charleston Gray)	carwcgB0791
Carg11146	Watermelon (97103) v1	carwmB0815