Carg11117 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11117
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Malic enzyme
Location	Cucurbita_argyrosperma_scaffold_027 : 1080107 .. 1082406 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCCCGGCCCCTTCCCGTCTCCAATATTCTTGTACAGCTTCAACTGCTTCCGCTATATTTTCACTGCAACATTTATGTTTCCACTGCGATGAACGAAGCCTCTACAATTTCAATCTCTTTAAATGAAACTCAATTAGCATTGCTTTGATTCACGGCGTCGATTCTACGAGCTTTGGATCCTATTTTTTCTAATCTGATTGGAACATTTCTTGGAGTAGAGTATTGGATTTGAGGCAGTGCTGCATTTGGTTTTTTGATTATCAGATTGGTCTTTTCTTGATTCTTTTTTTCTAGATCCAGTTTGATGTGGAACCTTGCGAGGTTAACTTTGGCGAGTTTGCGCCGATCTAGGCGGTTCTCGACTGCGATTCCTGGACCGTGTATTGTCCATAAGCGCGGTGCTGATATTCTCCATGATCCTTGGTTCAACAAGGTGCGTTGCTTCCTTTGTTTTCTTTGATTCTTCATGTTTGGTAGTTTTTTCAGTTGGTTTCATCGTTTTTTCTTTTTTTTTTTTTTGCGTTTTCTCGTTTTGGATGCTGTTTTCGTTTAGTTGTTTGTAGGCGCGCTCGTTTGAGGTTCAGTTAATGTATGAGTTGAAATTGCTTTGTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCAAAACTATACTTTTTAGTGTTTCTTACTCAAAAGTTGAAAAGAGGATCTAAAAGTGTTTATGTGATGAACATGTTTGACAATTGTTTTATTTCGTAATGGCTATGTTTTCCTATGGTACCTCCGTTTATTGCAGTATCAGAAGTTGTAGATATTTCGATGTAGGAATTTTCTTCGGTTGTTTGCCTCGACAAAGAGATTCCAAGGAGCTTTATATTTAGTTTATTGTAATTAATCAATTATTTTTTTCAGTAGAATTAATGAATTTAAGCATTTTGTTTATATTCTGGTGTAAGCGTACGGATGAATGCAAGTGCATAAAAATACATAGTGCTCTATAAATTTAAGATAGGATCGAATTTCTGTCTGGCTTCAGAAGTGAAGATGTCCCTATTCAGGGTGATAATTGGAACATCTTCATGAATTGTGTACTTACACTTGGATGTTTCTAACATTGTAAACAAATCAAGCTTTTTTTTTAGTTATTGTGCTTCTAAAATCTGTTTTTAAGTACTCTTTGGGGCATCTCTTTAAGACTAAGGCGTTAATTCTTCAGGTTTATGTTCGCTAGGAAATTGATGTTTGATCATCACTTTTTAATTCTTTATCAGTATGTATTTTGCTCCTTTTTTATGTTTCTTAAATTCTGCAAAATTGGAAGTACCCAAATCTATGTTCCTTTTTATATTTCTAAAAAGAAAACATTCTTTATCCCATGGTTGTATCTGACATAATATCGTATCATTGTCATGTGGAACTCTCTTTAAAGTTGTCCCTTTTTATTTTCAAAGAGCAGGATACTGGATTTCCTCTCACTGAAAGAGACCGTCTAGGAATCCGTGGCCTTCTTCCTCCACGAGTGATATCATTTGAGCAACAATATGCTCGTTTCAGTAAGTTCATGCTTCATCTTAAGTTTTCATCACTTAGTCTACCATCAGAATGACTTAGGTCAATCCCTTAGAAAAGAAACATATCAATGGATAACTAAGAAGATTATTGTAATGAAAATTTTGTAGGCTATTACGTAGGGCAGTTAGACATTGTTTGGTAGGTTATTACGTAGTTGCTAGCTGTTAAACATTGTTTGGTAGGCTATTACGTAGTTGCTAGCTGGTAAATGTCAATTGCTAGTAGTTTAATTATTTGATTTGTTGCTGTGTTATTATTTGTCTAGTTCGTTGCAAGCAACTAGTTGGTCAATTGAAAATATCTATGATAGGGCATTGCACTTGAAGTCGCAATTTTGTTTAAAGAAATATCTTTATTGATTATGCGAGACGTTGCAACTCTGTTCTATCCATCCCTATCGTGGTTACGAAAATTACCCTTAAGTTGAGTTAATTACAATTAACAAAAGTAATATACTTACGAAAGAGATTGAATAATTGTAATCACAACTTTGGTACTGAATAAAGACTTCTTTTAGTATTTGGGAAGAATTTCAATCCCTATCAGCATTAGAGATAAAATCGTTTCTTGAATGTCTCTTGCATTTTTTGTTCAATTTCCTAGTGGAATCATATCGATCACTGGAGAGGAATACTCATGGTCAACCAGATGGTATTGTTTCATTGGCGAAATGGAGGATCTTAAATAGATTGCATGATAGAAATGAAACACTGTACTATCGAGTAAGTTGCAAAAATGTTGTTTAG

mRNA sequence

TCCCCCGGCCCCTTCCCGTCTCCAATATTCTTGTACAGCTTCAACTGCTTCCGCTATATTTTCACTGCAACATTTATGTTTCCACTGCGATGAACGAAGCCTCTACAATTTCAATCTCTTTAAATGAAACTCAATTAGCATTGCTTTGATTCACGGCGTCGATTCTACGAGCTTTGGATCCTATTTTTTCTAATCTGATTGGAACATTTCTTGGAGTAGAGTATTGGATTTGAGGCAGTGCTGCATTTGGTTTTTTGATTATCAGATTGGTCTTTTCTTGATTCTTTTTTTCTAGATCCAGTTTGATGTGGAACCTTGCGAGGTTAACTTTGGCGAGTTTGCGCCGATCTAGGCGGTTCTCGACTGCGATTCCTGGACCGTGTATTGTCCATAAGCGCGGTGCTGATATTCTCCATGATCCTTGGTTCAACAAGGATACTGGATTTCCTCTCACTGAAAGAGACCGTCTAGGAATCCGTGGCCTTCTTCCTCCACGAGTGATATCATTTGAGCAACAATATGCTCGTTTCATGGAATCATATCGATCACTGGAGAGGAATACTCATGGTCAACCAGATGGTATTGTTTCATTGGCGAAATGGAGGATCTTAAATAGATTGCATGATAGAAATGAAACACTGTACTATCGAGTAAGTTGCAAAAATGTTGTTTAG

Coding sequence (CDS)

ATGTGGAACCTTGCGAGGTTAACTTTGGCGAGTTTGCGCCGATCTAGGCGGTTCTCGACTGCGATTCCTGGACCGTGTATTGTCCATAAGCGCGGTGCTGATATTCTCCATGATCCTTGGTTCAACAAGGATACTGGATTTCCTCTCACTGAAAGAGACCGTCTAGGAATCCGTGGCCTTCTTCCTCCACGAGTGATATCATTTGAGCAACAATATGCTCGTTTCATGGAATCATATCGATCACTGGAGAGGAATACTCATGGTCAACCAGATGGTATTGTTTCATTGGCGAAATGGAGGATCTTAAATAGATTGCATGATAGAAATGAAACACTGTACTATCGAGTAAGTTGCAAAAATGTTGTTTAG

Protein sequence

MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKNVV

Homology

[Close]

BLAST of Carg11117 vs. NCBI nr
Match: XP_022964521.1 (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [Cucurbita moschata])

HSP 1 Score: 250.4 bits (638), Expect = 3.2e-63
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL
Sbjct: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

[Close]

BLAST of Carg11117 vs. NCBI nr
Match: XP_022999821.1 (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [Cucurbita maxima])

HSP 1 Score: 250.4 bits (638), Expect = 3.2e-63
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL
Sbjct: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

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BLAST of Carg11117 vs. NCBI nr
Match: XP_023514814.1 (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.4 bits (638), Expect = 3.2e-63
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL
Sbjct: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

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BLAST of Carg11117 vs. NCBI nr
Match: XP_022156123.1 (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [Momordica charantia])

HSP 1 Score: 243.4 bits (620), Expect = 3.9e-61
Identity = 113/121 (93.39%), Postives = 115/121 (95.04%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MWNLARLT ASL RSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL
Sbjct: 1   MWNLARLTAASLSRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLERNTHGQPD +VSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

[Close]

BLAST of Carg11117 vs. NCBI nr
Match: XP_008460179.1 (PREDICTED: NAD-dependent malic enzyme 59 kDa isoform, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 236.9 bits (603), Expect = 3.7e-59
Identity = 110/121 (90.91%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MWNL + T AS RRSR  STAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL
Sbjct: 1   MWNLVKFTAASCRRSRWLSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

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BLAST of Carg11117 vs. TAIR10
Match: AT4G00570.1 (NAD-dependent malic enzyme 2)

HSP 1 Score: 190.3 bits (482), Expect = 7.1e-49
Identity = 93/127 (73.23%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MW-NLARLTLAS----LRRSRR-FSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDR 60
           MW N+A L+ A+       SRR FSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDR
Sbjct: 2   MWKNIAGLSKAAAAARTHGSRRCFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDR 61

Query: 61  LGIRGLLPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYY 120
           LGIRGLLPPRV++  QQ  RF+ES+RSLE NT G+P+ +V+LAKWR+LNRLHDRNETLYY
Sbjct: 62  LGIRGLLPPRVMTCVQQCDRFIESFRSLENNTKGEPENVVALAKWRMLNRLHDRNETLYY 121

Query: 121 RVSCKNV 122
           RV   N+
Sbjct: 122 RVLIDNI 128

[Close]

BLAST of Carg11117 vs. TAIR10
Match: AT2G13560.1 (NAD-dependent malic enzyme 1)

HSP 1 Score: 132.1 bits (331), Expect = 2.3e-31
Identity = 69/131 (52.67%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 3   NLARLTLASLRR--SRR--FSTAIPG--------PCIVHKRGADILHDPWFNKDTGFPLT 62
           N  RL+ +SL R   RR  +S+A+          P IVHK+G DILHDPWFNK T F +T
Sbjct: 5   NKLRLSSSSLSRILHRRILYSSAVRSFTTSEGHRPTIVHKQGLDILHDPWFNKGTAFTMT 64

Query: 63  ERDRLGIRGLLPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNE 122
           ER+RL +RGLLPP V+  EQQ  RFM   + LE      P    +LAKWRILNRLHDRNE
Sbjct: 65  ERNRLDLRGLLPPNVMDSEQQIFRFMTDLKRLEEQARDGPSDPNALAKWRILNRLHDRNE 124

[Close]

BLAST of Carg11117 vs. TAIR10
Match: AT2G19900.1 (NADP-malic enzyme 1)

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 31/90 (34.44%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 32  GADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVISFEQQYARFMESYRSLERNTHGQPD 91
           G  +L DP +NK   F   ERD   +RGLLPP V+  + Q  R + + R  +        
Sbjct: 42  GYSLLRDPRYNKGLAFTEKERDTHYLRGLLPPVVLDQKLQEKRLLNNIRQYQ-------- 101

Query: 92  GIVSLAKWRILNRLHDRNETLYYRVSCKNV 122
               L K+  L  L +RNE L+Y++   NV
Sbjct: 102 --FPLQKYMALTELQERNERLFYKLLIDNV 121

[Close]

BLAST of Carg11117 vs. TAIR10
Match: AT1G79750.1 (NADP-malic enzyme 4)

HSP 1 Score: 53.9 bits (128), Expect = 8.0e-08
Identity = 31/90 (34.44%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 32  GADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVISFEQQYARFMESYRSLERNTHGQPD 91
           G  +L DP  NK   F   ERD   +RGLLPP VIS + Q  + M + R  +        
Sbjct: 107 GYTLLRDPHHNKGLAFSHRERDAHYLRGLLPPTVISQDLQVKKIMHTLRQYQ-------- 166

Query: 92  GIVSLAKWRILNRLHDRNETLYYRVSCKNV 122
             V L K+  +  L + NE L+Y++   +V
Sbjct: 167 --VPLQKYMAMMDLQETNERLFYKLLIDHV 186

[Close]

BLAST of Carg11117 vs. TAIR10
Match: AT5G25880.1 (NADP-malic enzyme 3)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 31/90 (34.44%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 32  GADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVISFEQQYARFMESYRSLERNTHGQPD 91
           G  ++ DP +NK   F   ERD   I GLLPP V+S + Q  + M + R           
Sbjct: 49  GYTLMRDPRYNKGLAFTDKERDAHYITGLLPPVVLSQDVQERKVMHNLRQY--------- 108

Query: 92  GIVSLAKWRILNRLHDRNETLYYRVSCKNV 122
             V L ++  L  L +RNE L+Y++   NV
Sbjct: 109 -TVPLQRYMALMDLQERNERLFYKLLIDNV 128

[Close]

BLAST of Carg11117 vs. Swiss-Prot
Match: sp|P37225|MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.9e-55
Identity = 97/121 (80.17%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MW +AR   ++ RR+RR STAI  PCIVHKRGADILHDPWFNKDTGFP+TERDRLG+RGL
Sbjct: 1   MWRVARSAASTFRRTRRLSTAISAPCIVHKRGADILHDPWFNKDTGFPMTERDRLGLRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQY RFMES+RSLE+NT GQPD +VSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYDRFMESFRSLEKNTEGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

[Close]

BLAST of Carg11117 vs. Swiss-Prot
Match: sp|Q8L7K9|MAO2_ARATH (NAD-dependent malic enzyme 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NAD-ME2 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-47
Identity = 93/127 (73.23%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MW-NLARLTLAS----LRRSRR-FSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDR 60
           MW N+A L+ A+       SRR FSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDR
Sbjct: 2   MWKNIAGLSKAAAAARTHGSRRCFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDR 61

Query: 61  LGIRGLLPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYY 120
           LGIRGLLPPRV++  QQ  RF+ES+RSLE NT G+P+ +V+LAKWR+LNRLHDRNETLYY
Sbjct: 62  LGIRGLLPPRVMTCVQQCDRFIESFRSLENNTKGEPENVVALAKWRMLNRLHDRNETLYY 121

Query: 121 RVSCKNV 122
           RV   N+
Sbjct: 122 RVLIDNI 128

[Close]

BLAST of Carg11117 vs. Swiss-Prot
Match: sp|P37221|MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-32
Identity = 69/108 (63.89%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 15  SRRFSTAI-PGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVISFEQQYA 74
           SR F+T     P IVHKR  DILHDPWFNK T F  TERDRL IRGLLPP V+SFEQQ A
Sbjct: 31  SRNFTTTEGHRPTIVHKRSLDILHDPWFNKGTAFSFTERDRLHIRGLLPPNVMSFEQQIA 90

Query: 75  RFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKNV 122
           RFM   + LE      P     LAKWRILNRLHDRNETLYY+V  +N+
Sbjct: 91  RFMADLKRLEVQARDGPSDPYVLAKWRILNRLHDRNETLYYKVLMENI 138

[Close]

BLAST of Carg11117 vs. Swiss-Prot
Match: sp|Q9SIU0|MAO1_ARATH (NAD-dependent malic enzyme 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NAD-ME1 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.2e-30
Identity = 69/131 (52.67%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 3   NLARLTLASLRR--SRR--FSTAIPG--------PCIVHKRGADILHDPWFNKDTGFPLT 62
           N  RL+ +SL R   RR  +S+A+          P IVHK+G DILHDPWFNK T F +T
Sbjct: 5   NKLRLSSSSLSRILHRRILYSSAVRSFTTSEGHRPTIVHKQGLDILHDPWFNKGTAFTMT 64

Query: 63  ERDRLGIRGLLPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNE 122
           ER+RL +RGLLPP V+  EQQ  RFM   + LE      P    +LAKWRILNRLHDRNE
Sbjct: 65  ERNRLDLRGLLPPNVMDSEQQIFRFMTDLKRLEEQARDGPSDPNALAKWRILNRLHDRNE 124

[Close]

BLAST of Carg11117 vs. Swiss-Prot
Match: sp|P37224|MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus OX=28502 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.7e-28
Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 9   LASLRRSRRFSTAIPGP-CIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGLLPPRVIS 68
           +A++   R F+T+      IV+KR  DIL DPWFNK T F +TERDRL +RGLLPP V++
Sbjct: 22  IANVSNHRSFATSEGHRLAIVNKRSLDILQDPWFNKGTAFSMTERDRLDLRGLLPPNVMT 81

Query: 69  FEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKNV 122
            EQQ  RF    R LE  T   P     LAKWRILNRLHDRNET++++V  +N+
Sbjct: 82  TEQQIERFTADLRVLELTTKDGPSDTYDLAKWRILNRLHDRNETMFFKVLIENI 135

[Close]

BLAST of Carg11117 vs. TrEMBL
Match: tr|A0A1S3CBH2|A0A1S3CBH2_CUCME (Malic enzyme OS=Cucumis melo OX=3656 GN=LOC103499065 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.4e-59
Identity = 110/121 (90.91%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MWNL + T AS RRSR  STAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL
Sbjct: 1   MWNLVKFTAASCRRSRWLSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

[Close]

BLAST of Carg11117 vs. TrEMBL
Match: tr|A0A251LW48|A0A251LW48_MANES (Malic enzyme OS=Manihot esculenta OX=3983 GN=MANES_01G260100 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.5e-58
Identity = 106/121 (87.60%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MWN+AR   +SLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLG+RGL
Sbjct: 1   MWNVARFATSSLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGLRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLE+NT GQP+ +VSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLEKNTQGQPNSVVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

[Close]

BLAST of Carg11117 vs. TrEMBL
Match: tr|A0A2N9ELW4|A0A2N9ELW4_FAGSY (Malic enzyme OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3416 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.0e-58
Identity = 107/121 (88.43%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MWNLAR   ++L RSR FSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLG+RGL
Sbjct: 1   MWNLARFAASNLTRSRPFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGLRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLE+NT GQPDGIVSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLEKNTKGQPDGIVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

[Close]

BLAST of Carg11117 vs. TrEMBL
Match: tr|A0A2P5F2K5|A0A2P5F2K5_9ROSA (Malic enzyme OS=Trema orientalis OX=63057 GN=TorRG33x02_120920 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.7e-57
Identity = 106/121 (87.60%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MW LAR   +SLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFP TERDRLG+RGL
Sbjct: 1   MWKLARFAASSLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPYTERDRLGLRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLE+NT GQP G+VSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLEKNTQGQPYGVVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

[Close]

BLAST of Carg11117 vs. TrEMBL
Match: tr|A0A067K8R9|A0A067K8R9_JATCU (Malic enzyme OS=Jatropha curcas OX=180498 GN=JCGZ_14436 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-57
Identity = 106/121 (87.60%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MWNLARLTLASLRRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGIRGL 60
           MW LAR T +SL  SRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLG+RGL
Sbjct: 1   MWRLARFTASSLGLSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGLRGL 60

Query: 61  LPPRVISFEQQYARFMESYRSLERNTHGQPDGIVSLAKWRILNRLHDRNETLYYRVSCKN 120
           LPPRVISFEQQYARFMESYRSLE+NT GQPD +VSLAKWRILNRLHDRNETLYYRV   N
Sbjct: 61  LPPRVISFEQQYARFMESYRSLEKNTQGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDN 120

Query: 121 V 122
           +
Sbjct: 121 I 121

The following BLAST results are available for this feature:

BLAST of Carg11117 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964521.1	3.2e-63	96.69	NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [Cucurbita moschata]	[more]
XP_022999821.1	3.2e-63	96.69	NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [Cucurbita maxima]	[more]
XP_023514814.1	3.2e-63	96.69	NAD-dependent malic enzyme 59 kDa isoform, mitochondrial isoform X1 [Cucurbita p...	[more]
XP_022156123.1	3.9e-61	93.39	NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [Momordica charantia]	[more]
XP_008460179.1	3.7e-59	90.91	PREDICTED: NAD-dependent malic enzyme 59 kDa isoform, mitochondrial isoform X1 [...	[more]

BLAST of Carg11117 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00570.1	7.1e-49	73.23	NAD-dependent malic enzyme 2	[more]
AT2G13560.1	2.3e-31	52.67	NAD-dependent malic enzyme 1	[more]
AT2G19900.1	1.6e-08	34.44	NADP-malic enzyme 1	[more]
AT1G79750.1	8.0e-08	34.44	NADP-malic enzyme 4	[more]
AT5G25880.1	1.4e-07	34.44	NADP-malic enzyme 3	[more]

BLAST of Carg11117 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P37225\|MAON_SOLTU	2.9e-55	80.17	NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum OX...	[more]
sp\|Q8L7K9\|MAO2_ARATH	1.3e-47	73.23	NAD-dependent malic enzyme 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
sp\|P37221\|MAOM_SOLTU	1.2e-32	63.89	NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum OX...	[more]
sp\|Q9SIU0\|MAO1_ARATH	4.2e-30	52.67	NAD-dependent malic enzyme 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
sp\|P37224\|MAOM_AMAHP	8.7e-28	52.63	NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochond...	[more]

BLAST of Carg11117 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CBH2\|A0A1S3CBH2_CUCME	2.4e-59	90.91	Malic enzyme OS=Cucumis melo OX=3656 GN=LOC103499065 PE=3 SV=1	[more]
tr\|A0A251LW48\|A0A251LW48_MANES	3.5e-58	87.60	Malic enzyme OS=Manihot esculenta OX=3983 GN=MANES_01G260100 PE=3 SV=1	[more]
tr\|A0A2N9ELW4\|A0A2N9ELW4_FAGSY	6.0e-58	88.43	Malic enzyme OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3416 PE=3 SV=1	[more]
tr\|A0A2P5F2K5\|A0A2P5F2K5_9ROSA	1.7e-57	87.60	Malic enzyme OS=Trema orientalis OX=63057 GN=TorRG33x02_120920 PE=3 SV=1	[more]
tr\|A0A067K8R9\|A0A067K8R9_JATCU	2.3e-57	87.60	Malic enzyme OS=Jatropha curcas OX=180498 GN=JCGZ_14436 PE=3 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11117-RA	Carg11117-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.20.1370.30		coord: 30..122 e-value: 2.3E-29 score: 103.5
None	No IPR available	PANTHER	PTHR23406:SF32	NAD-DEPENDENT MALIC ENZYME 2, MITOCHONDRIAL	coord: 1..121
None	No IPR available	PANTHER	PTHR23406	MALIC ENZYME-RELATED	coord: 1..121
None	No IPR available	SUPERFAMILY	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain	coord: 17..121

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11117	Cla006920	Watermelon (97103) v1	carwmB1079
Carg11117	MELO3C022538	Melon (DHL92) v3.5.1	carmeB1043
Carg11117	CSPI06G05430	Wild cucumber (PI 183967)	carcpiB1118
Carg11117	Cucsa.363220	Cucumber (Gy14) v1	carcgyB1193
Carg11117	CsGy6G005390	Cucumber (Gy14) v2	carcgybB1061

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11117	Watermelon (97103) v2	carwmbB1135
Carg11117	Silver-seed gourd	carcarB267
Carg11117	Cucurbita maxima (Rimu)	carcmaB1488
Carg11117	Cucurbita maxima (Rimu)	carcmaB1490
Carg11117	Cucurbita maxima (Rimu)	carcmaB1495
Carg11117	Cucurbita moschata (Rifu)	carcmoB1447
Carg11117	Cucurbita moschata (Rifu)	carcmoB1452
Carg11117	Cucurbita pepo (Zucchini)	carcpeB1500
Carg11117	Cucurbita pepo (Zucchini)	carcpeB1503
Carg11117	Bottle gourd (USVL1VR-Ls)	carlsiB979
Carg11117	Melon (DHL92) v3.6.1	carmedB1057
Carg11117	Watermelon (Charleston Gray)	carwcgB1048