Carg11106 (gene) Silver-seed gourd

Overview
NameCarg11106
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTwo-component response regulator
LocationCucurbita_argyrosperma_scaffold_027 : 1045030 .. 1045559 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTACCGATGACAACGAGATTGTAAAGTTGGGTTGCCTCTTCAAAGGAGCTATGTTGTGTCTCGTAAAGCCACTCACCATGAAAAACATAAAAGATCTCTGGCAATTTTTATTTATCGGAGGAAGAGAACGATCCATCTCTATTAGAACATCGAATCAAGTTCAAAAGGAATTGACTGATGAAAATGACATAGACAAGAGTACCGACAAGAAATCCCAAAAGACCAAAAGAAAAGAACACGACGAAGAAGTTAGTACTCGACAGGTAGAAGGATATGGTAGTGAATCAACGGGGCCGAAGAAGCCAAAGCTAATTTGGACTCAACAATTGCATAAGACATTCTTGCAAGCCATTGAAGCATTGGGAGTTGATAGTGAGTTTTTTTTTTTTTTTTTTCGTCGTCGTCTTCGTCGTCCTAAAGATCATCTAACTTTGATTTTCTTAACTTAGAAGCTCATCCAAAGGAGATACTTCAACACATGAATGTTCCTGGATTAAGAAAAGAAAACGTTTCAAGTCATTTACAG

mRNA sequence

ATGACTACCGATGACAACGAGATTGTAAAGTTGGGTTGCCTCTTCAAAGGAGCTATGTTGTGTCTCGTAAAGCCACTCACCATGAAAAACATAAAAGATCTCTGGCAATTTTTATTTATCGGAGGAAGAGAACGATCCATCTCTATTAGAACATCGAATCAAGTTCAAAAGGAATTGACTGATGAAAATGACATAGACAAGAGTACCGACAAGAAATCCCAAAAGACCAAAAGAAAAGAACACGACGAAGAAGTTAGTACTCGACAGGTAGAAGGATATGGTAGTGAATCAACGGGGCCGAAGAAGCCAAAGCTAATTTGGACTCAACAATTGCATAAGACATTCTTGCAAGCCATTGAAGCATTGGGAGTTGATAAAGCTCATCCAAAGGAGATACTTCAACACATGAATGTTCCTGGATTAAGAAAAGAAAACGTTTCAAGTCATTTACAG

Coding sequence (CDS)

ATGACTACCGATGACAACGAGATTGTAAAGTTGGGTTGCCTCTTCAAAGGAGCTATGTTGTGTCTCGTAAAGCCACTCACCATGAAAAACATAAAAGATCTCTGGCAATTTTTATTTATCGGAGGAAGAGAACGATCCATCTCTATTAGAACATCGAATCAAGTTCAAAAGGAATTGACTGATGAAAATGACATAGACAAGAGTACCGACAAGAAATCCCAAAAGACCAAAAGAAAAGAACACGACGAAGAAGTTAGTACTCGACAGGTAGAAGGATATGGTAGTGAATCAACGGGGCCGAAGAAGCCAAAGCTAATTTGGACTCAACAATTGCATAAGACATTCTTGCAAGCCATTGAAGCATTGGGAGTTGATAAAGCTCATCCAAAGGAGATACTTCAACACATGAATGTTCCTGGATTAAGAAAAGAAAACGTTTCAAGTCATTTACAG

Protein sequence

MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELTDENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIEALGVDKAHPKEILQHMNVPGLRKENVSSHLQ
Homology
[Close]
BLAST of Carg11106 vs. NCBI nr
Match: XP_022999829.1 (two-component response regulator ARR2-like [Cucurbita maxima])

HSP 1 Score: 282.7 bits (722), Expect = 7.2e-73
Identity = 141/151 (93.38%), Postives = 148/151 (98.01%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNI+DLWQFLFIGGRERSISIRTSNQVQKELT
Sbjct: 92  MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIRDLWQFLFIGGRERSISIRTSNQVQKELT 151

Query: 61  DENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIE 120
           DEND+DKSTD+K QKTKRKEH+E+VSTRQVEG GS+ST PK+PKLIWTQQLHKTFLQAIE
Sbjct: 152 DENDVDKSTDEKFQKTKRKEHNEDVSTRQVEGDGSDSTRPKRPKLIWTQQLHKTFLQAIE 211

Query: 121 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ
Sbjct: 212 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 242

[Close]
BLAST of Carg11106 vs. NCBI nr
Match: XP_022964475.1 (two-component response regulator ARR2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 6.5e-66
Identity = 132/151 (87.42%), Postives = 137/151 (90.73%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRE+SISIRTSN+VQKE T
Sbjct: 92  MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGREQSISIRTSNRVQKEST 151

Query: 61  DENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIE 120
           DEND+DKS           EHDEEVSTRQVEG GS+STG KKPKLIWTQQLHKTFLQAIE
Sbjct: 152 DENDVDKSXXXXXXXXXXXEHDEEVSTRQVEGDGSKSTGLKKPKLIWTQQLHKTFLQAIE 211

Query: 121 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           ALG+DKAHPKEILQHMNVPGLRKENVSSHLQ
Sbjct: 212 ALGIDKAHPKEILQHMNVPGLRKENVSSHLQ 242

[Close]
BLAST of Carg11106 vs. NCBI nr
Match: XP_022964474.1 (two-component response regulator ARR2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 6.5e-66
Identity = 132/151 (87.42%), Postives = 137/151 (90.73%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRE+SISIRTSN+VQKE T
Sbjct: 92  MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGREQSISIRTSNRVQKEST 151

Query: 61  DENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIE 120
           DEND+DKS           EHDEEVSTRQVEG GS+STG KKPKLIWTQQLHKTFLQAIE
Sbjct: 152 DENDVDKSXXXXXXXXXXXEHDEEVSTRQVEGDGSKSTGLKKPKLIWTQQLHKTFLQAIE 211

Query: 121 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           ALG+DKAHPKEILQHMNVPGLRKENVSSHLQ
Sbjct: 212 ALGIDKAHPKEILQHMNVPGLRKENVSSHLQ 242

[Close]
BLAST of Carg11106 vs. NCBI nr
Match: XP_022964477.1 (two-component response regulator ARR2-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63
Identity = 130/151 (86.09%), Postives = 135/151 (89.40%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRE+SISIRTSN+VQKE T
Sbjct: 92  MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGREQSISIRTSNRVQKEST 151

Query: 61  DENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIE 120
           DEND+DKS           EHDEEVSTRQVEG GS+STG KKPKLIWTQQLHKTFLQAIE
Sbjct: 152 DENDVDKSXXXXXXXXXXXEHDEEVSTRQVEGDGSKSTGLKKPKLIWTQQLHKTFLQAIE 211

Query: 121 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           ALG+D  HPKEILQHMNVPGLRKENVSSHLQ
Sbjct: 212 ALGID-THPKEILQHMNVPGLRKENVSSHLQ 241

[Close]
BLAST of Carg11106 vs. NCBI nr
Match: XP_022964476.1 (two-component response regulator ARR2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 1.8e-63
Identity = 130/151 (86.09%), Postives = 135/151 (89.40%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRE+SISIRTSN+VQKE T
Sbjct: 92  MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGREQSISIRTSNRVQKEST 151

Query: 61  DENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIE 120
           DEND+DKS           EHDEEVSTRQVEG GS+STG KKPKLIWTQQLHKTFLQAIE
Sbjct: 152 DENDVDKSXXXXXXXXXXXEHDEEVSTRQVEGDGSKSTGLKKPKLIWTQQLHKTFLQAIE 211

Query: 121 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           ALG+D  HPKEILQHMNVPGLRKENVSSHLQ
Sbjct: 212 ALGID-THPKEILQHMNVPGLRKENVSSHLQ 241

[Close]
BLAST of Carg11106 vs. TAIR10
Match: AT3G16857.2 (response regulator 1)

HSP 1 Score: 71.2 bits (173), Expect = 6.0e-13
Identity = 30/51 (58.82%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 101 KKPKLIWTQQLHKTFLQAIEALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           KKP+++W+ +LH+ F+ A+  LGV+KA PK+IL+ MNVPGL +ENV+SHLQ
Sbjct: 236 KKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQ 286

[Close]
BLAST of Carg11106 vs. TAIR10
Match: AT5G58080.1 (response regulator 18)

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-12
Identity = 28/51 (54.90%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 101 KKPKLIWTQQLHKTFLQAIEALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           KKP+++W+Q+LH+ F+ A++ LG+DKA PK+IL  M++ GL +ENV+SHLQ
Sbjct: 176 KKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQ 226

[Close]
BLAST of Carg11106 vs. TAIR10
Match: AT4G31920.1 (response regulator 10)

HSP 1 Score: 67.8 bits (164), Expect = 6.6e-12
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 98  TGPKKPKLIWTQQLHKTFLQAIEALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           T  KKP+++WT +LH  FL A++ LGV++A PK+IL  MNV  L +ENV+SHLQ
Sbjct: 179 TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQ 232

[Close]
BLAST of Carg11106 vs. TAIR10
Match: AT3G46640.3 (Homeodomain-like superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 101 KKPKLIWTQQLHKTFLQAIEALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           K+P+L+WT QLHK F+  +  LG+  A PK I+Q MNV GL +ENV+SHLQ
Sbjct: 143 KRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQ 193

[Close]
BLAST of Carg11106 vs. TAIR10
Match: AT3G10760.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0 

Query: 101 KKPKLIWTQQLHKTFLQAIEALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           K+P+L+WT QLHK F+ A+  LG+  A PK I+Q M+V GL +ENV+SHLQ
Sbjct: 104 KRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQ 154

[Close]
BLAST of Carg11106 vs. Swiss-Prot
Match: sp|A2XE31|ORR21_ORYSI (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.8e-13
Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 0 

Query: 94  GSESTGPKKPKLIWTQQLHKTFLQAIEALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           G  S+  KKP+++W+ +LH+ F+ A+  LG+DKA PK+IL+ MNVPGL +ENV+SHLQ
Sbjct: 194 GDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQ 251

[Close]
BLAST of Carg11106 vs. Swiss-Prot
Match: sp|Q8H7S7|ORR21_ORYSJ (Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica OX=39947 GN=RR21 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.8e-13
Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 0 

Query: 94  GSESTGPKKPKLIWTQQLHKTFLQAIEALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           G  S+  KKP+++W+ +LH+ F+ A+  LG+DKA PK+IL+ MNVPGL +ENV+SHLQ
Sbjct: 194 GDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQ 251

[Close]
BLAST of Carg11106 vs. Swiss-Prot
Match: sp|B8AEH1|ORR23_ORYSI (Two-component response regulator ORR23 OS=Oryza sativa subsp. indica OX=39946 GN=RR23 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 50/152 (32.89%), Postives = 86/152 (56.58%), Query Frame = 0 

Query: 17  GAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELTDENDIDK--------- 76
           GA   L+KP+ ++ ++++WQ +    R+ S   R +    +E     + D          
Sbjct: 118 GACDYLLKPVRIEELRNIWQHVI--RRKFSTRDRANLDFYEECNKPPNADSDHVHGHVTC 177

Query: 77  -STDKKSQKTKRK------EHDE-EVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAI 136
            S D+  + +K++      E DE EV+T+ ++    + + PKKP+++W+ +LH+ F+ A+
Sbjct: 178 GSPDQSGRPSKKRKEYCSEEEDEGEVNTQDID----DPSAPKKPRVVWSVELHRKFVAAV 237

Query: 137 EALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
             LG+DKA PK IL+ MNV  L +ENV+SHLQ
Sbjct: 238 NQLGIDKAVPKRILELMNVEKLTRENVASHLQ 263

[Close]
BLAST of Carg11106 vs. Swiss-Prot
Match: sp|Q6K8X6|ORR23_ORYSJ (Two-component response regulator ORR23 OS=Oryza sativa subsp. japonica OX=39947 GN=RR23 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 50/152 (32.89%), Postives = 86/152 (56.58%), Query Frame = 0 

Query: 17  GAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELTDENDIDK--------- 76
           GA   L+KP+ ++ ++++WQ +    R+ S   R +    +E     + D          
Sbjct: 118 GACDYLLKPVRIEELRNIWQHVI--RRKFSTRDRANLDFYEECNKPPNADSDHVHGHVTC 177

Query: 77  -STDKKSQKTKRK------EHDE-EVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAI 136
            S D+  + +K++      E DE EV+T+ ++    + + PKKP+++W+ +LH+ F+ A+
Sbjct: 178 GSPDQSGRPSKKRKEYCSEEEDEGEVNTQDID----DPSAPKKPRVVWSVELHRKFVAAV 237

Query: 137 EALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
             LG+DKA PK IL+ MNV  L +ENV+SHLQ
Sbjct: 238 NQLGIDKAVPKRILELMNVEKLTRENVASHLQ 263

[Close]
BLAST of Carg11106 vs. Swiss-Prot
Match: sp|Q5N6V8|ORR26_ORYSJ (Two-component response regulator ORR26 OS=Oryza sativa subsp. japonica OX=39947 GN=RR26 PE=3 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 2.8e-12
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 0 

Query: 17  GAMLCLVKPLTMKNIKDLWQFLF---------IGGRERSISIRTSNQVQKELTDENDIDK 76
           GA   L+KP+ MK ++++WQ ++         I G +    ++      + L DE  +  
Sbjct: 104 GACDYLLKPVRMKELRNIWQHVYRKKMHEVKEIEGNDSCDDLQILRNSFEGL-DEKSLFM 163

Query: 77  STDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIEALGVDKA 136
            +D  + + KRK+ D++ + ++     S+    KK +++W+  LH+ F+ A+  +G DK 
Sbjct: 164 RSDSDTMR-KRKDVDKDHADQE----SSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKV 223

Query: 137 HPKEILQHMNVPGLRKENVSSHLQ 152
            PK+IL  MNVPGL +ENV+SHLQ
Sbjct: 224 GPKKILDLMNVPGLTRENVASHLQ 241

[Close]
BLAST of Carg11106 vs. TrEMBL
Match: tr|A0A1S3CC31|A0A1S3CC31_CUCME (two-component response regulator ARR10-like OS=Cucumis melo OX=3656 GN=LOC103499089 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-31
Identity = 80/151 (52.98%), Postives = 97/151 (64.24%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           M+ DDNEI KLGCLFKGAML LVKPLTMK I++LWQF  I G          N +   ++
Sbjct: 102 MSDDDNEIAKLGCLFKGAMLHLVKPLTMKTIRNLWQFAIIEGIITPXXXXXXNILHNPVS 161

Query: 61  DENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIE 120
               + +   K  + TK++ H                TG K+PKLIWTQQLH TFL  I+
Sbjct: 162 VL--VQRQQQKMIKITKQQPH-------------RSKTGMKRPKLIWTQQLHNTFLHTIQ 221

Query: 121 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           ALG++KAHPKEILQHMNVP LRKEN+S+HLQ
Sbjct: 222 ALGLEKAHPKEILQHMNVPELRKENISNHLQ 237

[Close]
BLAST of Carg11106 vs. TrEMBL
Match: tr|B9RDJ9|B9RDJ9_RICCO (Sensor histidine kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_1613700 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.2e-29
Identity = 73/157 (46.50%), Postives = 99/157 (63.06%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           ++ DD+E   LGCLFKGA+  L+KP+TM ++K LWQF  +  R+ +++   S+      T
Sbjct: 97  LSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQFSCVKNRKNNVATEGSHSYHGHST 156

Query: 61  DENDIDKST------DKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKT 120
            E   ++++      D   Q  ++ E  E     + E     ST PKKPKLIWT +LH  
Sbjct: 157 PEIASNEASECLSVLDTSQQNAQKSEGKELQEMDKDEEATVTSTFPKKPKLIWTNELHDR 216

Query: 121 FLQAIEALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
           FLQAI  LG+D AHPK+IL+HMNVPGLRKEN+SSHLQ
Sbjct: 217 FLQAIRILGIDSAHPKKILKHMNVPGLRKENISSHLQ 253

[Close]
BLAST of Carg11106 vs. TrEMBL
Match: tr|V4U880|V4U880_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10019943mg PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.4e-29
Identity = 72/151 (47.68%), Postives = 96/151 (63.58%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           M+ DDNE   LG LFKGA   LVKP++M +IK+LWQF F    ++ ++    + +  + T
Sbjct: 100 MSADDNENDMLGALFKGADFYLVKPISMSDIKNLWQFAFTKKTDKMVATEGVSSISSDDT 159

Query: 61  DENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIE 120
           D + +     K  Q  KRKE  E    + V G   +++  KK KL WT +LH  FLQA+ 
Sbjct: 160 DNHILPNKWKKSHQDPKRKEATE--VDKNVGGVNDDASVLKKQKLTWTSELHNKFLQAVR 219

Query: 121 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
            LG+D AHPK+ILQHMNVPGL+KEN+SSHLQ
Sbjct: 220 VLGIDGAHPKKILQHMNVPGLKKENISSHLQ 248

[Close]
BLAST of Carg11106 vs. TrEMBL
Match: tr|A0A2H5NPH3|A0A2H5NPH3_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_064110 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.4e-29
Identity = 72/151 (47.68%), Postives = 96/151 (63.58%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           M+ DDNE   LG LFKGA   LVKP++M +IK+LWQF F    ++ ++    + +  + T
Sbjct: 116 MSADDNENDMLGALFKGADFYLVKPISMSDIKNLWQFAFTKKTDKMVATEGVSSISSDDT 175

Query: 61  DENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIE 120
           D + +     K  Q  KRKE  E    + V G   +++  KK KL WT +LH  FLQA+ 
Sbjct: 176 DNHILPNKWKKSHQDPKRKEATE--VDKNVGGVNDDASVLKKQKLTWTSELHNKFLQAVR 235

Query: 121 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
            LG+D AHPK+ILQHMNVPGL+KEN+SSHLQ
Sbjct: 236 VLGIDGAHPKKILQHMNVPGLKKENISSHLQ 264

[Close]
BLAST of Carg11106 vs. TrEMBL
Match: tr|A0A067HDR9|A0A067HDR9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g038156mg PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.4e-29
Identity = 72/151 (47.68%), Postives = 96/151 (63.58%), Query Frame = 0 

Query: 1   MTTDDNEIVKLGCLFKGAMLCLVKPLTMKNIKDLWQFLFIGGRERSISIRTSNQVQKELT 60
           M+ DDNE   LG LFKGA   LVKP++M +IK+LWQF F    ++ ++    + +  + T
Sbjct: 85  MSADDNENDMLGALFKGADFYLVKPISMSDIKNLWQFAFTKKTDKMVATEGVSSISSDDT 144

Query: 61  DENDIDKSTDKKSQKTKRKEHDEEVSTRQVEGYGSESTGPKKPKLIWTQQLHKTFLQAIE 120
           D + +     K  Q  KRKE  E    + V G   +++  KK KL WT +LH  FLQA+ 
Sbjct: 145 DNHILPNKWKKSHQDPKRKEATE--VDKNVGGVNDDASVLKKQKLTWTSELHNKFLQAVR 204

Query: 121 ALGVDKAHPKEILQHMNVPGLRKENVSSHLQ 152
            LG+D AHPK+ILQHMNVPGL+KEN+SSHLQ
Sbjct: 205 VLGIDGAHPKKILQHMNVPGLKKENISSHLQ 233

The following BLAST results are available for this feature:
BLAST of Carg11106 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022999829.17.2e-7393.38two-component response regulator ARR2-like [Cucurbita maxima][more]
XP_022964475.16.5e-6687.42two-component response regulator ARR2-like isoform X2 [Cucurbita moschata][more]
XP_022964474.16.5e-6687.42two-component response regulator ARR2-like isoform X1 [Cucurbita moschata][more]
XP_022964477.11.8e-6386.09two-component response regulator ARR2-like isoform X4 [Cucurbita moschata][more]
XP_022964476.11.8e-6386.09two-component response regulator ARR2-like isoform X3 [Cucurbita moschata][more]
BLAST of Carg11106 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16857.26.0e-1358.82response regulator 1[more]
AT5G58080.12.3e-1254.90response regulator 18[more]
AT4G31920.16.6e-1255.56response regulator 10[more]
AT3G46640.31.1e-1156.86Homeodomain-like superfamily protein[more]
AT3G10760.11.5e-1156.86Homeodomain-like superfamily protein[more]
BLAST of Carg11106 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A2XE31|ORR21_ORYSI9.8e-1355.17Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN... [more]
sp|Q8H7S7|ORR21_ORYSJ9.8e-1355.17Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|B8AEH1|ORR23_ORYSI1.7e-1232.89Two-component response regulator ORR23 OS=Oryza sativa subsp. indica OX=39946 GN... [more]
sp|Q6K8X6|ORR23_ORYSJ1.7e-1232.89Two-component response regulator ORR23 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q5N6V8|ORR26_ORYSJ2.8e-1232.64Two-component response regulator ORR26 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
BLAST of Carg11106 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CC31|A0A1S3CC31_CUCME2.0e-3152.98two-component response regulator ARR10-like OS=Cucumis melo OX=3656 GN=LOC103499... [more]
tr|B9RDJ9|B9RDJ9_RICCO4.2e-2946.50Sensor histidine kinase, putative OS=Ricinus communis OX=3988 GN=RCOM_1613700 PE... [more]
tr|V4U880|V4U880_9ROSI9.4e-2947.68Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10019943mg PE=4 ... [more]
tr|A0A2H5NPH3|A0A2H5NPH3_CITUN9.4e-2947.68Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_064110 PE=4... [more]
tr|A0A067HDR9|A0A067HDR9_CITSI9.4e-2947.68Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g038156m... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR006447Myb_dom_plants
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11106-RACarg11106-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 98..151
e-value: 2.6E-22
score: 80.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..102
NoneNo IPR availablePANTHERPTHR43874:SF19PROTEIN RESPONSE REGULATOR 23-RELATEDcoord: 1..151
NoneNo IPR availablePANTHERPTHR43874FAMILY NOT NAMEDcoord: 1..151
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 102..151
e-value: 1.4E-17
score: 61.7
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 100..151