Carg10997 (gene) Silver-seed gourd

NameCarg10997
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_027 : 281161 .. 283103 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGCGGCGACAGCACTGAACGGGAAAAAGAGGCGCGATGACACTGAGCTGCTGAAACGGAGGAGGAGACCACGTGAAGAAGAAGAAGAATAAGAAGTGGTATGGTGCACGTGAGAGAGTCGAAGATGAAAGAGTTAGGTTTTCCTCGTTCTTTTATTTATTTATTTATTTATTTATTTTATATATGTGTGTGTGAAGAACAACAACTAATTATAAATAGTTCATTTAAAAAAATAAAAAATAAAAAATAAAAAAAGCTAAAAAAATATCAACAATTAAAAAAAAAATTGCTTACCATATAATTATTTTTATATATATGTAATTGTTTGGAATGCAATTTCTTAAGATTAAATATTTAAAAATAGATAAAAATAAATTAAAAATTTTATTAAAAATATAATTTAAATAAGCGCTTCGAACCTATCCAACCATACCAAATGTTATAGTTTAATTGGGTTGGGTTTGTTTTTTAATAAGAGATAATTGGGTTAAAAAAAATAGATTAATTTAAATTTAAAAAATGGCTCGACCGAACCCATAAACATACCTGAGTTCAATTAAAATAGAGCGTATTAACCAAAATAAAAGTAATAAACAATATTAGATCGTTGTTAATGCTTTGGGCGTATATATATGTTTGTAGTTACACTTAGAACTATGTGGGTATGGATTATAAAATATGTGTATATATACTCTCGTATAAACTAATTTAAGTGATATTTAATCCACGAACATTATATAGTTAATTCTGAAAATTTGAGTGTCGCCAATTAGGTTACGGTTACCAGTTGAATTTACCAAAAAAAACATATAATTATTGTAAAAAATATATTAAAAAAAAACCTGGAGAAGCGTGTACGAACAATTCTAAAAATCCTAAAAATTCAAAACACTAATTATACAGCTTTATAATTCCAAATAGACCGTCTACTCACGAGTGTTAAGGTTCGTTATTGTGCTACCATTTAAATTTCTCCATCTTTTATGAGATCTATCACGACCTCTTACATTGCTCTCTCGTATGTTTCGCTTAAAATTTTATTTTAACTAATTTCAAAATAGAATCTACTGTATTTAAATCTAAGGCCTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGAGATTTTGTGTACATGTAACGGCTAATATCCACAGCTAGCAGATATTGTTTTTTTTGGCTTTCCTTTTCCTGCTCTCCTTCAAGACTTTAAACCCCATATGCTAGGGGAAGGTTTCCACACCGTCGTAAAATGATGGTTTGTTCTCTTCCCCAACTAGCGTCCTCGCTGCACTCTTTCCTTCCTCCAATTGATGTGGGACTGCCCCCAAATTCACCCTCTTTAGGGTCTAGCGACCTTACTGGCACACCGCCTCGTGTCTACCCCCTTTGGAGAACAGTGAGAAAGCTGACACATCGTCCGATGTCTAGCTCTGATACCATTTGTAACGCCCAAGATCCACCGCTAGCCGATATTGTTCTCTCTGGGCTCTCCCTTTCGAGATTCCCTCAAGCCTTTAAAACCCATTTGCACACCCTCTATAAACGGTGGTGTTCTCCTCCCGAGGTACTTTTGACTTTTTTTTATTTTTATTATTCGAAGGATATTAATAAAAAAAATTTAAAATTTAAGAGTATTTTTTAAATATTATTAAAACAAAATATTTACCATTTTTGTTAATATTTTTGTATATATTATTAATTTTTTAAAAAATATTTATGGTATATTTATTAATTTAGCAATTGTAATTTAAGGGAATAGCTAAATAAGTAAATAAGAAAATGGTCAGAAAAAACACGCTGTCGATACATACGGTCTTTTAATAGTTGCATCTCGCATGTGTCTCATCATACGTTTTCGTTCCTCTTTCATTCGCGGCTTTGTCTACTGGAGCGGAAAAGGGTGTAATGAATAAGAGAATTGAATCTTGA

mRNA sequence

ATGACGGCGGCGACAGCACTGAACGGGAAAAAGAGGCGCGATGACACTGAGCTGCTGAAACGGAGGAGGAGACCACCGTCCTCGCTGCACTCTTTCCTTCCTCCAATTGATGTGGGACTGCCCCCAAATTCACCCTCTTTAGGGTCTAGCGACCTTACTGGCACACCGCCTCGTGTCTACCCCCTTTGGAGAACAGTGAGAAAGCTGACACATCGTCCGATGTCTAGCTCTGATACCATTTGTAACGCCCAAGATCCACCGCTAGCCGATATTGTTCTCTCTGGGCTCTCCCTTTCGAGATTCCCTCAAGCCTTTAAAACCCATTTGCACACCCTCTATAAACGGTGGTGTTCTCCTCCCGAGTTGCATCTCGCATGTGTCTCATCATACGTTTTCGTTCCTCTTTCATTCGCGGCTTTGTCTACTGGAGCGGAAAAGGGTGTAATGAATAAGAGAATTGAATCTTGA

Coding sequence (CDS)

ATGACGGCGGCGACAGCACTGAACGGGAAAAAGAGGCGCGATGACACTGAGCTGCTGAAACGGAGGAGGAGACCACCGTCCTCGCTGCACTCTTTCCTTCCTCCAATTGATGTGGGACTGCCCCCAAATTCACCCTCTTTAGGGTCTAGCGACCTTACTGGCACACCGCCTCGTGTCTACCCCCTTTGGAGAACAGTGAGAAAGCTGACACATCGTCCGATGTCTAGCTCTGATACCATTTGTAACGCCCAAGATCCACCGCTAGCCGATATTGTTCTCTCTGGGCTCTCCCTTTCGAGATTCCCTCAAGCCTTTAAAACCCATTTGCACACCCTCTATAAACGGTGGTGTTCTCCTCCCGAGTTGCATCTCGCATGTGTCTCATCATACGTTTTCGTTCCTCTTTCATTCGCGGCTTTGTCTACTGGAGCGGAAAAGGGTGTAATGAATAAGAGAATTGAATCTTGA

Protein sequence

MTAATALNGKKRRDDTELLKRRRRPPSSLHSFLPPIDVGLPPNSPSLGSSDLTGTPPRVYPLWRTVRKLTHRPMSSSDTICNAQDPPLADIVLSGLSLSRFPQAFKTHLHTLYKRWCSPPELHLACVSSYVFVPLSFAALSTGAEKGVMNKRIES
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10997-RACarg10997-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..24

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg10997Silver-seed gourdcarcarB267
Carg10997Silver-seed gourdcarcarB275
Carg10997Silver-seed gourdcarcarB615
Carg10997Silver-seed gourdcarcarB649
Carg10997Cucumber (Gy14) v2carcgybB1056
Carg10997Cucumber (Gy14) v2carcgybB1058
Carg10997Cucumber (Gy14) v2carcgybB1059
Carg10997Cucumber (Gy14) v1carcgyB1190
Carg10997Cucumber (Gy14) v1carcgyB1195
Carg10997Cucurbita maxima (Rimu)carcmaB1485
Carg10997Cucurbita maxima (Rimu)carcmaB1489
Carg10997Cucurbita maxima (Rimu)carcmaB1492
Carg10997Cucurbita maxima (Rimu)carcmaB1494
Carg10997Cucurbita maxima (Rimu)carcmaB1495
Carg10997Cucurbita moschata (Rifu)carcmoB1443
Carg10997Cucurbita moschata (Rifu)carcmoB1448
Carg10997Cucurbita moschata (Rifu)carcmoB1450
Carg10997Cucurbita moschata (Rifu)carcmoB1451
Carg10997Cucurbita moschata (Rifu)carcmoB1452
Carg10997Cucurbita pepo (Zucchini)carcpeB1501
Carg10997Cucurbita pepo (Zucchini)carcpeB1503
Carg10997Cucurbita pepo (Zucchini)carcpeB1504
Carg10997Cucurbita pepo (Zucchini)carcpeB1506
Carg10997Cucurbita pepo (Zucchini)carcpeB1507
Carg10997Wild cucumber (PI 183967)carcpiB1112
Carg10997Wild cucumber (PI 183967)carcpiB1114
Carg10997Wild cucumber (PI 183967)carcpiB1115
Carg10997Cucumber (Chinese Long) v2carcuB1090
Carg10997Cucumber (Chinese Long) v2carcuB1092
Carg10997Cucumber (Chinese Long) v2carcuB1093
Carg10997Cucumber (Chinese Long) v3carcucB1123
Carg10997Cucumber (Chinese Long) v3carcucB1125
Carg10997Cucumber (Chinese Long) v3carcucB1126
Carg10997Bottle gourd (USVL1VR-Ls)carlsiB981
Carg10997Bottle gourd (USVL1VR-Ls)carlsiB983
Carg10997Bottle gourd (USVL1VR-Ls)carlsiB984
Carg10997Melon (DHL92) v3.5.1carmeB1045
Carg10997Melon (DHL92) v3.5.1carmeB1046
Carg10997Melon (DHL92) v3.5.1carmeB1050
Carg10997Melon (DHL92) v3.6.1carmedB1059
Carg10997Melon (DHL92) v3.6.1carmedB1060
Carg10997Melon (DHL92) v3.6.1carmedB1064
Carg10997Watermelon (Charleston Gray)carwcgB1045
Carg10997Watermelon (Charleston Gray)carwcgB1046
Carg10997Watermelon (Charleston Gray)carwcgB1050
Carg10997Watermelon (97103) v1carwmB1073
Carg10997Watermelon (97103) v1carwmB1075
Carg10997Watermelon (97103) v1carwmB1077
Carg10997Watermelon (97103) v2carwmbB1131
Carg10997Watermelon (97103) v2carwmbB1133
Carg10997Watermelon (97103) v2carwmbB1137
Carg10997Wax gourdcarwgoB1263
Carg10997Wax gourdcarwgoB1271