Carg10905 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGCTGTCACTTCCGAATTTCTACTCATTGGGGATGATGAACATTGAACATTACACAGCCCACCAAATGTTTGACGAAATTCCTCTAGTAAGTGGTATAGCTGCATTGTACATGTTCATCGTTCGTAGCTTCCCCACGTATAAACAGGACAAGGTTGTCGATTGAGAATGGAAACTTGTGGGTTTTGATTCAAATGCAGCTTTACTGAGATAGTTCTTTTTCTGGAAACTTTAAGTTTAGGAACTAAACTATTTTCTCTAGAAGCTAAAGTACTAATTATGATTTCAGATCTATACAATGAAGAAAGGTTTGCACCCTCAAATGCAGTGGATATCATATGTCACACAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACCATGTTGGTAAAGTCTACCACTTAAGAGCAAGGCGTCAATTAGCTGAAAGTATTGGGCAGATTGCCAAGTTCAAACGTCGTTACGAGAAAGATATTGTCGAAAATGATGAAAGTGTTGAAAAGGCTGAAAAGTGAGGTTCAATGCAAAGCACAAGGATCAGCTGTTCACTTGGATCATTATGGATTCGTTTTGTGAGTTCTAGGAATTTTAAGTTCCCTTCTATTTAATGGAGTCGATCCCTTTTCATAGTCTAGTATCTTACAGAACACCGAGTTAATTTTATAATGGTTTTCGTATGCTCTTACCATTAGATATATTGAATCTGCATTCCTATCTTCTGTTCAATAAATGTGATCATTTTCCACCTTATTTATCTAATTGTGCTTTCGAGCTCACCGGGCTTGTTGTGCTGCTTAAAGCCTATTAGAATAGTGGAGTTGTTGACTTATGTATACTCTAGTTGTTAGGTATTTAATATCTTCCCTAGCCCCTATGAATTTTAGGTTTGAATCCCTCCTAAAAGAAAGAAGATAAGTTGGGTATTCTGATGGACTACTTTGGTGTCTCAAGAGGGAGAAATTATTGAGGCTGGAACAATGTAGTTGGTAGTTTTGTACTATTTAAGATATGAGAAAGAAACTAAAAAAATTATGCCTCGTAGAGAGAAGTGGCCACAATGTGGCGATTATTGTGAGATCCCACATTAGTTGGAGTGTGGAGCGAAACATTTTTTATAAGGGTGTGGAAACCTCTACTTAGCAA ATGTGGCTGTCACTTCCGAATTTCTACTCATTGGGGATGATGAACATTGAACATTACACAGCCCACCAAATGTTTGACGAAATTCCTCTAGTAAGTGGTATAGCTGCATTGTACATGTTCATCGTTCGTAGCTTCCCCACGTATAAACAGGACAAGATCTATACAATGAAGAAAGGTTTGCACCCTCAAATGCAGTGGATATCATATGTCACACAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACCATGTTGGTAAAGTCTACCACTTAAGAGCAAGGCGTCAATTAGCTGAAAGTATTGGGCAGATTGCCAAGTTCAAACGTCGTTACGAGAAAGATATTGTCGAAAATGATGAAAGTGTTGAAAAGGCTGAAAAGTGAGGTTCAATGCAAAGCACAAGGATCAGCTGTTCACTTGGATCATTATGGATTCGTTTTGTGAGTTCTAGGAATTTTAAGTTCCCTTCTATTTAATGGAGTCGATCCCTTTTCATAGTCTAGTATCTTACAGAACACCGAGTTAATTTTATAATGGTTTTCGTATGCTCTTACCATTAGATATATTGAATCTGCATTCCTATCTTCTGTTCAATAAATGTGATCATTTTCCACCTTATTTATCTAATTGTGCTTTCGAGCTCACCGGGCTTGTTGTGCTGCTTAAAGCCTATTAGAATAGTGGAGTTGTTGACTTATGTATACTCTAGTTGTTAGGTATTTAATATCTTCCCTAGCCCCTATGAATTTTAGGTTTGAATCCCTCCTAAAAGAAAGAAGATAAGTTGGGTATTCTGATGGACTACTTTGGTGTCTCAAGAGGGAGAAATTATTGAGGCTGGAACAATGTAGTTGGTAGTTTTGTACTATTTAAGATATGAGAAAGAAACTAAAAAAATTATGCCTCGTAGAGAGAAGTGGCCACAATGTGGCGATTATTGTGAGATCCCACATTAGTTGGAGTGTGGAGCGAAACATTTTTTATAAGGGTGTGGAAACCTCTACTTAGCAA ATGTGGCTGTCACTTCCGAATTTCTACTCATTGGGGATGATGAACATTGAACATTACACAGCCCACCAAATGTTTGACGAAATTCCTCTAGTAAGTGGTATAGCTGCATTGTACATGTTCATCGTTCGTAGCTTCCCCACGTATAAACAGGACAAGATCTATACAATGAAGAAAGGTTTGCACCCTCAAATGCAGTGGATATCATATGTCACACAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACCATGTTGGTAAAGTCTACCACTTAAGAGCAAGGCGTCAATTAGCTGAAAGTATTGGGCAGATTGCCAAGTTCAAACGTCGTTACGAGAAAGATATTGTCGAAAATGATGAAAGTGTTGAAAAGGCTGAAAAGTGA MWLSLPNFYSLGMMNIEHYTAHQMFDEIPLVSGIAALYMFIVRSFPTYKQDKIYTMKKGLHPQMQWISYVTQSGRLMHVMMTKIHHVGKVYHLRARRQLAESIGQIAKFKRRYEKDIVENDESVEKAEK
BLAST of Carg10905 vs. NCBI nr
Match: XP_023547264.1 (uncharacterized protein LOC111806134 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 146.4 bits (368), Expect = 6.9e-32 Identity = 73/74 (98.65%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Carg10905 vs. NCBI nr
Match: XP_022946219.1 (uncharacterized protein LOC111450371 [Cucurbita moschata]) HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
BLAST of Carg10905 vs. NCBI nr
Match: XP_022999184.1 (uncharacterized protein LOC111493644 [Cucurbita maxima]) HSP 1 Score: 141.7 bits (356), Expect = 1.7e-30 Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0
BLAST of Carg10905 vs. NCBI nr
Match: XP_022143125.1 (uncharacterized protein LOC111013069 [Momordica charantia] >XP_022143126.1 uncharacterized protein LOC111013069 [Momordica charantia]) HSP 1 Score: 128.3 bits (321), Expect = 1.9e-26 Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 0
BLAST of Carg10905 vs. NCBI nr
Match: XP_010651375.1 (PREDICTED: uncharacterized protein LOC100853477 [Vitis vinifera]) HSP 1 Score: 118.2 bits (295), Expect = 2.0e-23 Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of Carg10905 vs. TAIR10
Match: AT5G55125.1 (Ribosomal protein L31) HSP 1 Score: 110.5 bits (275), Expect = 7.6e-25 Identity = 55/74 (74.32%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of Carg10905 vs. TrEMBL
Match: tr|F6GUK5|F6GUK5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g00680 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23 Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of Carg10905 vs. TrEMBL
Match: tr|A0A1S4BHW3|A0A1S4BHW3_TOBAC (uncharacterized protein LOC107808428 OS=Nicotiana tabacum OX=4097 GN=LOC107808428 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.9e-23 Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 0
BLAST of Carg10905 vs. TrEMBL
Match: tr|B9STZ5|B9STZ5_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0753040 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.9e-23 Identity = 54/65 (83.08%), Postives = 61/65 (93.85%), Query Frame = 0
BLAST of Carg10905 vs. TrEMBL
Match: tr|A0A2I4ESM8|A0A2I4ESM8_9ROSI (uncharacterized protein LOC108992325 OS=Juglans regia OX=51240 GN=LOC108992325 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 5.1e-23 Identity = 57/69 (82.61%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of Carg10905 vs. TrEMBL
Match: tr|A0A067F7J7|A0A067F7J7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0303881mg PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 8.6e-23 Identity = 56/68 (82.35%), Postives = 64/68 (94.12%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |