Carg10864 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTCCTCTTCCCATAATTTTCTTCTCTGAGAATCCTTTCCGCCATGTTTAGGCTCTGGAAATGGTATCAGAACTGCCTCACCTTCCATCCGGTGAAGACTCAGGTCATCAGCTCCGCCATTCTATGGGGCACTGGCGACATTGCAGCCCAATACGTTACTCACTCGGCCGCCAAAACGCATCTTCAAACTTCTGTGAGTATTATCCCCTTCATTTTGTTTTCTTTGTAACTTTCATTGATGAGGCTATCTTTCTTGCTTCCTTCTTTGAGCTTGTGGTTGATTTCCTTTCATTGATCGGCATTTTCTTGTTGACTCGAATTGCTTTTGTTCTTGTCTTGTTCTTGCTCTGATTTAGGTTGAGCGATGAAATATTTCATTGTCTTGTTTTTGTTAATTTGTCATTTGATTTTTAGTCATAACTTCAATTAATTCCTTGGTTTTACTCGAGCAAGAAATTACCGTAAGTTTCGGCGATCTTTGCTTTTGTAGAATTAGCCCGCGTAATGTTGATGCTGTATCTTGATTTCATCTTCAGTGCATTTTGAATTTTTCTGATTAATTAAAGTTCTTGGGCTGTGGGATATCATTTTATGTCTAATGTATATGAAGGATATTTGTTCTCAATTTTTGGGCAATTTTTTTAATCATTTAGAAGTACCACTTTCAATAGTTAACTAAGAACTGCTCTTCTTTAAAGCGTGTTTCAAATTTCATCCAATCTTTTGGAGAGTGTTCTTTACTTTAGAAATCCTGAACTAAAGTGTATTCTGGGAGAATTTTACTGAATTTTCTTAGAAGTACCACGGATGCTGAATTTCATTCTTGGGGAACATCCCTTGAAGATGGAGACAAAAGCCCTGGGGGAATTTTATTACACCCTTCTGCCATACCTTAGATTTCTTATGGCCATAGTTAATTTGGTAGTTTCTTGATGCATATGTTACTTATGAACAAAATACTTCAGAAATTGGAGAGGTTTTTGTAATCCATCTCATGGGAAGCCACCCTCTTTTGTAATTTCCTAATGAAATTGTTTCTTATGAACAAAATACTTCAGAAATCCTACAGAATGTTCTCCTGCTCCTCTTGCCCCCTCCAAGGCCAACTGCCTCTTGCTAATGGTGGAACCTCTGTTAGCTTAAGTTCTTGTACTTCTATCAAATAAAAGTTCATGAATTGTCCATCTTTTTGTTGGTTCACAACCTTATTACCTTCTCTTAGTTCAAGCTTGGCACGATTATCAACTGACTATCAAAAATTTTAACACTAGTCCTTTTCTGACATTAAAACGGTGATGATATTTGAAGCACCCAGTTATGGTAATAGCCCAAACCCACCGCTAACAGATATTGTCCGTTTTGATTTGTTATGTATTGCTGTTAGTCTCACAGTTTTAAAATGCGTCTACTCAGGAGAGGTTTCCACACTCTTATAAGGAATGTTTCGTTTCTCTCTCCAACCGATGTGGGATCTCACAGTTACTTTGCTTGGTTATTCGTATTCCAATTCAATTTTTAGCACAAGACAGCAGTTTGCAACTCTAGGTGTATATTATAACTGAACTAACACTTACAATTAATTTTTTTTATGTAGCAGGATGCTGAAAAAGAGTTCAAAATCAACTGGAAACGTGTGGGAATCACAAGCATGTTTGGATTCGGCTTTGTTGGACCAGTCGGCCACATGTGGTTCGTTTCCTTTATCTTTTCCTTATCAACTTTTGGTCATATCTATCATCTTTGTTACTACAAGAATAAGCTTCTATATTCTCAGGAAGGCAACATGGCTCTGCTTTATCCATTATTTTTTATTTTCATATTCTGTGAATGCATAGATTGAAGTGGCAATTGGTTGGTTTGTTTAATCTTCATGGTTCTCTATGTAAGGAAAAAATCTGGAAAGTACTTTAGATTCTTGGATCAAGTCCTTTCAAGTACCATACCATTAAATGGTTAACGTATCTAAGTTTCGTGGATTCATGAAGTTTGGTGTAGGATAGTTTGAAGTTTTATACAAGGAAATATGTTTTAAAGATTGTGAGTTTAATATAACACGAGTTTGGTTTGTGGATTTATAATTTGTCAAGTTAACATGGAGTATAAGAAGGCGATTCTATAATTTCGAGTTTATATATCCTTCAGGTTTAGTAAACTCATATTTTGGGATAAGTAACATAACTCACTCGAGATCAATGCGGGTTTAAACATAACTCACTCAACTTGTTTACATTAAGTTATATAAACTTAACTCGTGAACACCTCTAAAGTTGCATGAGTTTGTAAAGTACTATTTTTTGTAACTTGATTGGATCCCGTGTTTGTGGGCGGTGTTCTTTTTTGTATGCTCTTGTATTCTTTTGTTTTCTCTCATCGAAACTAGTACGATTATTCGTTGGAACGATTGTTTTGAACTTGTACGTTATTTGTGCACACGGGCATTTAAGAAATCGGATCGTTTGGTAGGTATGAAGGATTGGACAGATTTATAAGGCTAAGGCTTCAGCTACGGCCAAAATCAGCCAAGTTTGTTGGGGCAAAACTGGCAATGGATGGGCTGATCTTCGGACCGCTCGACTTAATCGTGTTCTTCAGTTATATGGGATTTGCCAACGGCAAAGATGCTTCTGAAGTGAAAGAAGACTTGAAGCGGGACGTGTTCCCGGCGTTTATGTTGACGGGTACGGTGTGGCCTATCATTCAGGTCGCAAACTTTCGATATGTGCCAGTGAGGTACCAACTTCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACCTCTTTTAATCCTTTTAATGAAAAATAA CTTCCTCTTCCCATAATTTTCTTCTCTGAGAATCCTTTCCGCCATGTTTAGGCTCTGGAAATGGTATCAGAACTGCCTCACCTTCCATCCGGTGAAGACTCAGGTCATCAGCTCCGCCATTCTATGGGGCACTGGCGACATTGCAGCCCAATACGTTACTCACTCGGCCGCCAAAACGCATCTTCAAACTTCTCAGGATGCTGAAAAAGAGTTCAAAATCAACTGGAAACGTGTGGGAATCACAAGCATGTTTGGATTCGGCTTTGTTGGACCAGTCGGCCACATGTGGTATGAAGGATTGGACAGATTTATAAGGCTAAGGCTTCAGCTACGGCCAAAATCAGCCAAGTTTGTTGGGGCAAAACTGGCAATGGATGGGCTGATCTTCGGACCGCTCGACTTAATCGTGTTCTTCAGTTATATGGGATTTGCCAACGGCAAAGATGCTTCTGAAGTGAAAGAAGACTTGAAGCGGGACGTGTTCCCGGCGTTTATGTTGACGGGTACGGTGTGGCCTATCATTCAGGTCGCAAACTTTCGATATGTGCCAGTGAGGTACCAACTTCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACCTCTTTTAATCCTTTTAATGAAAAATAA ATGTTTAGGCTCTGGAAATGGTATCAGAACTGCCTCACCTTCCATCCGGTGAAGACTCAGGTCATCAGCTCCGCCATTCTATGGGGCACTGGCGACATTGCAGCCCAATACGTTACTCACTCGGCCGCCAAAACGCATCTTCAAACTTCTCAGGATGCTGAAAAAGAGTTCAAAATCAACTGGAAACGTGTGGGAATCACAAGCATGTTTGGATTCGGCTTTGTTGGACCAGTCGGCCACATGTGGTATGAAGGATTGGACAGATTTATAAGGCTAAGGCTTCAGCTACGGCCAAAATCAGCCAAGTTTGTTGGGGCAAAACTGGCAATGGATGGGCTGATCTTCGGACCGCTCGACTTAATCGTGTTCTTCAGTTATATGGGATTTGCCAACGGCAAAGATGCTTCTGAAGTGAAAGAAGACTTGAAGCGGGACGTGTTCCCGGCGTTTATGTTGACGGGTACGGTGTGGCCTATCATTCAGGTCGCAAACTTTCGATATGTGCCAGTGAGGTACCAACTTCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACCTCTTTTAATCCTTTTAATGAAAAATAA MFRLWKWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQTSQDAEKEFKINWKRVGITSMFGFGFVGPVGHMWYEGLDRFIRLRLQLRPKSAKFVGAKLAMDGLIFGPLDLIVFFSYMGFANGKDASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLSWFEQQNDAPWKQWFTSFNPFNEK
BLAST of Carg10864 vs. NCBI nr
Match: XP_022999532.1 (protein SYM1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 449.1 bits (1154), Expect = 8.2e-123 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Carg10864 vs. NCBI nr
Match: XP_022946566.1 (protein SYM1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 447.2 bits (1149), Expect = 3.1e-122 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of Carg10864 vs. NCBI nr
Match: XP_023546833.1 (protein SYM1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 447.2 bits (1149), Expect = 3.1e-122 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of Carg10864 vs. NCBI nr
Match: XP_022999533.1 (protein SYM1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 442.6 bits (1137), Expect = 7.6e-121 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of Carg10864 vs. NCBI nr
Match: XP_022946567.1 (protein SYM1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 440.7 bits (1132), Expect = 2.9e-120 Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of Carg10864 vs. TAIR10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 301.2 bits (770), Expect = 5.0e-82 Identity = 143/229 (62.45%), Postives = 166/229 (72.49%), Query Frame = 0
BLAST of Carg10864 vs. TAIR10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 85.5 bits (210), Expect = 4.3e-17 Identity = 50/192 (26.04%), Postives = 86/192 (44.79%), Query Frame = 0
BLAST of Carg10864 vs. TAIR10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 78.2 bits (191), Expect = 6.9e-15 Identity = 46/185 (24.86%), Postives = 85/185 (45.95%), Query Frame = 0
BLAST of Carg10864 vs. TAIR10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 76.6 bits (187), Expect = 2.0e-14 Identity = 45/183 (24.59%), Postives = 89/183 (48.63%), Query Frame = 0
BLAST of Carg10864 vs. TAIR10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 72.8 bits (177), Expect = 2.9e-13 Identity = 54/189 (28.57%), Postives = 85/189 (44.97%), Query Frame = 0
BLAST of Carg10864 vs. Swiss-Prot
Match: sp|Q54XX9|PX24B_DICDI (PXMP2/4 family protein 2 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0278529 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.5e-22 Identity = 58/196 (29.59%), Postives = 96/196 (48.98%), Query Frame = 0
BLAST of Carg10864 vs. Swiss-Prot
Match: sp|Q4IPX8|SYM1_GIBZE (Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) OX=229533 GN=SYM1 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 8.9e-20 Identity = 59/189 (31.22%), Postives = 95/189 (50.26%), Query Frame = 0
BLAST of Carg10864 vs. Swiss-Prot
Match: sp|Q66GV0|MPV17_XENLA (Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19 Identity = 65/192 (33.85%), Postives = 93/192 (48.44%), Query Frame = 0
BLAST of Carg10864 vs. Swiss-Prot
Match: sp|Q2KIN6|MPV17_BOVIN (Protein Mpv17 OS=Bos taurus OX=9913 GN=MPV17 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18 Identity = 63/188 (33.51%), Postives = 89/188 (47.34%), Query Frame = 0
BLAST of Carg10864 vs. Swiss-Prot
Match: sp|P39210|MPV17_HUMAN (Protein Mpv17 OS=Homo sapiens OX=9606 GN=MPV17 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.7e-18 Identity = 63/188 (33.51%), Postives = 90/188 (47.87%), Query Frame = 0
BLAST of Carg10864 vs. TrEMBL
Match: tr|A0A1S3C7P9|A0A1S3C7P9_CUCME (protein Mpv17 OS=Cucumis melo OX=3656 GN=LOC103497800 PE=3 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 6.0e-114 Identity = 192/212 (90.57%), Postives = 203/212 (95.75%), Query Frame = 0
BLAST of Carg10864 vs. TrEMBL
Match: tr|A0A0A0LF15|A0A0A0LF15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004160 PE=3 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 3.9e-113 Identity = 190/212 (89.62%), Postives = 202/212 (95.28%), Query Frame = 0
BLAST of Carg10864 vs. TrEMBL
Match: tr|A0A251NFR2|A0A251NFR2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G232500 PE=3 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.1e-94 Identity = 158/211 (74.88%), Postives = 182/211 (86.26%), Query Frame = 0
BLAST of Carg10864 vs. TrEMBL
Match: tr|A0A067KC03|A0A067KC03_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07253 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 3.1e-94 Identity = 157/212 (74.06%), Postives = 179/212 (84.43%), Query Frame = 0
BLAST of Carg10864 vs. TrEMBL
Match: tr|A0A1R3GJE4|A0A1R3GJE4_9ROSI (Mpv17/PMP22 OS=Corchorus olitorius OX=93759 GN=COLO4_34847 PE=3 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 4.0e-94 Identity = 161/212 (75.94%), Postives = 181/212 (85.38%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |