Carg10790 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATCCTCCTCAGCTCAGGTACGCTTGACCGGATCGAAATTGGAAACGCCGATAATCGCACCCAAGATAGCGGCGACGACTACTCCACCGGCGGCAATGCTGAGCAAGAAATTCTTTAGAGAGGGACTAACTCCAGGCCCAGCAGCTTCAGCCACCTCAGGAAGCACCATGGAGGCCGTCAGTGCAGTAGCAGTGAGTCCAGCAACTGCCTTCTCCTTCAAAGAAGCCCGCACTTGGAACTTGGCTCTGGAGTTTGATGAAGCGGTTGGCTTGTTGGAAGGCCTCAAAGGCAATGCCTTAGCGAAGGCGTCGGTGTTCCTTGCTCTCTTCTGGGTCGCATTAGTAATTGGCATAGCCATTGAAACTGCGGAAGTTGAAGCCATTGGGTTCTGTCTTGCCTCTTCTCAGTCAATCTTGATTGAAGCTTTTACTAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGACTTGATTTTAGGATATTGAGGGAAGATAGATAGAGGTGGTGGTGGAAGCTTGACCCAGTGAGCGGTCCAAATTTAAGGTGCCCTGTCCCACGTGGCAAGTTTTGGACTTGAAACTGAAGATAACATTATCTTGTTGGCCCAATGACCTTTCAGGATTTGTTTGGAGGATGTTGCTGCAATATCGAAATATTATTCGAACTATTGTTATATTTTCTCAATCATTGTGGTGGTATTATTTAGTTGGAAAATTTGGTATTCTTGGTTAATTAAGGATTCTGCACTACAATTTGACTGTTATACTTGCCCATTTAACACAGGAACTTGATGGTTGTCTAACTCTGGGGTAGCTGCTATTTTTATAGCCGTGTTGCTGGCTGTGGTACATTACAGACTTCGATGAATCCAACTGCAAAAGAGTTAAAGACGGCAATTGGTAACTACTACGGGTTGTTTAGATTGATTAATTTAGAAGCCATGTTGATGGTAGTTTGGCTAAACATAATACGTTTCTATTTTTGTCTGTTTTTCAGTTTGGCACTCCGGTTTTGGGTACACATACACTCCAATTTTCATTCAATTAGATGGGTTAATCTACAATTTGGACCTGGACCAGTATTCTCTCAAGTGGACTTGGGCCCATTTACGCTTATGCCTCCTCCAAGACATGAGGTCAGAATCTAAACTAGCCAAATATCTCCTACCGATTCAATTTTCATTCATTTGCCCACTAATTTTAGTATAAGAAGTGTAAAAATCGTCATAACCTCGTTAATTTTAATAAACTAAAAGTTTGCGCAAAAATAATTATTTCTGTGTTATTTTTTCTTCTTTGATTGATTAATAAATCTCTCAAATAAAATAGTTTCCAACTAATTTGCAAACCCATAGTACAAAATTCATTATTTTGAATTCTGAAAAGTGTTTCTTAAAGTCTTTTATATATTTATCTAGAAAACAAATTTAAGAAAATAATTATCAAGTATAAACATATTTTAAAATAGTTGAAGAAAACACATTAAAAAACAACAGATAGATACTGGTTTTTTTTTTTTTTAAATAAAAAAAAAATATTGTTCTTTGTTTATTTTGAAATTGGTATATAGAAATGGAAGAAAAATGATTTATACCCCTAAATTTGACCTGTTGAATCAATTACAACTCTAAACTATTAATTGTATCAAGTTCAAGACTTTCATAATTGAACCAAACCTGTTATGGAATTTTTTTTAAACAAGTGAGTAGGGATTTCCATCCAAATGAGTTTATTTTTTTAGAAAATTCTTTTTTATGGAAGACTTGAATGGCTTTACTATTAGAAACTTAAATGAGGTGACCAAAAATGCACCCTACGTCCAAGACAAAGGGTTTAAGTTTCCTGCCTGTCTACAGCTTTCCATTACTCATTACAGGCAATGGCATTGTCATATGAAATAGCTTGTTTTGTGCCAATTTTGCATACTACAATCTTCCTCATTGTCTGAGAATCTTTCCATGTCGGTTGTTGAGAAACAAACACTCTTCAGTCTCCACTAACATTTGTCTTCCACAGATTTCACCCTCTGCTTCACTGTCCACTCCTAAACTACATATCAACCTTCAGTTCTTCTGCACCACAAGAATCTTCACGGTTTAGTTTTTGCAATCTTTGCCTGTTCCTCCAATTATTTTGACTCACTACCTGTCTCCCCAATTACCTCTTCTTTTCATTTCTTCTGCATCCTTGTCTCCTCTGCTGATCCTTCCAGTTTCTCTTTCTGCAGTGCCCAACATAAACCAGATTTGTTTGTTCAGATGGGAAGTTTTCCATACCTGAAATCATTGTGGATTCTATGGTTATCAAAAGCAGGACAAAGCATTCTTGGTGGAATAGTAGCCTGTCTGCGAAGGCAACCAGTTGAATTTGAGTTTCCCCTGTTTTGTCATTTTCCCTTGTTTCAAACCTGTAAAGCCAATCAAACTCAAACAATTAACCAAAACACACACAAAAATCAGTAAACAGAAGGCTCCCCTAAAGAAGATCCAGACTTAGAAGCCAGTGCCACCATCTTCCTTTATGTTACTTTACTTCCATTACTTTCCTCTCTCACTTCTCTTTTGGCAGGAATTCGTCGGGGAAATGTTTGACCATAGCCATGATTTTGCAGCCCTTGCTTCAGAGACACTTCTGTAA ATGTCATCCTCCTCAGCTCAGGTACGCTTGACCGGATCGAAATTGGAAACGCCGATAATCGCACCCAAGATAGCGGCGACGACTACTCCACCGGCGGCAATGCTGAGCAAGAAATTCTTTAGAGAGGGACTAACTCCAGGCCCAGCAGCTTCAGCCACCTCAGGAAGCACCATGGAGGCCGTCAGTGCAGTAGCAGTGAGTCCAGCAACTGCCTTCTCCTTCAAAGAAGCCCGCACTTGGAACTTGGCTCTGGAGTTTGATGAAGCGGTTGGCTTGTTGGAAGGCCTCAAAGGCAATGCCTTAGCGAAGGCGTCGGTGTTCCTTGCTCTCTTCTGGGTCGCATTAGTAATTGGCATAGCCATTGAAACTGCGGAAGTTGAAGCCATTGGGTTCTGTCTTGCCTCTTCTCACCGTGTTGCTGGCTGTGGTACATTACAGACTTCGATGAATCCAACTGCAAAAGAGTTAAAGACGGCAATTGTTTGGCACTCCGGTTTTGGGTACACATACACTCCAATTTTCATTCAATTAGATGGGTTAATCTACAATTTGGACCTGGACCATGCCCAACATAAACCAGATTTGTTTGTTCAGATGGGAAGTTTTCCATACCTGAAATCATTGTGGATTCTATGGTTATCAAAAGCAGGACAAAGCATTCTTGGTGGAATAGTAGCCTGTCTGCGAAGGCAACCAGAATTCGTCGGGGAAATGTTTGACCATAGCCATGATTTTGCAGCCCTTGCTTCAGAGACACTTCTGTAA ATGTCATCCTCCTCAGCTCAGGTACGCTTGACCGGATCGAAATTGGAAACGCCGATAATCGCACCCAAGATAGCGGCGACGACTACTCCACCGGCGGCAATGCTGAGCAAGAAATTCTTTAGAGAGGGACTAACTCCAGGCCCAGCAGCTTCAGCCACCTCAGGAAGCACCATGGAGGCCGTCAGTGCAGTAGCAGTGAGTCCAGCAACTGCCTTCTCCTTCAAAGAAGCCCGCACTTGGAACTTGGCTCTGGAGTTTGATGAAGCGGTTGGCTTGTTGGAAGGCCTCAAAGGCAATGCCTTAGCGAAGGCGTCGGTGTTCCTTGCTCTCTTCTGGGTCGCATTAGTAATTGGCATAGCCATTGAAACTGCGGAAGTTGAAGCCATTGGGTTCTGTCTTGCCTCTTCTCACCGTGTTGCTGGCTGTGGTACATTACAGACTTCGATGAATCCAACTGCAAAAGAGTTAAAGACGGCAATTGTTTGGCACTCCGGTTTTGGGTACACATACACTCCAATTTTCATTCAATTAGATGGGTTAATCTACAATTTGGACCTGGACCATGCCCAACATAAACCAGATTTGTTTGTTCAGATGGGAAGTTTTCCATACCTGAAATCATTGTGGATTCTATGGTTATCAAAAGCAGGACAAAGCATTCTTGGTGGAATAGTAGCCTGTCTGCGAAGGCAACCAGAATTCGTCGGGGAAATGTTTGACCATAGCCATGATTTTGCAGCCCTTGCTTCAGAGACACTTCTGTAA MSSSSAQVRLTGSKLETPIIAPKIAATTTPPAAMLSKKFFREGLTPGPAASATSGSTMEAVSAVAVSPATAFSFKEARTWNLALEFDEAVGLLEGLKGNALAKASVFLALFWVALVIGIAIETAEVEAIGFCLASSHRVAGCGTLQTSMNPTAKELKTAIVWHSGFGYTYTPIFIQLDGLIYNLDLDHAQHKPDLFVQMGSFPYLKSLWILWLSKAGQSILGGIVACLRRQPEFVGEMFDHSHDFAALASETLL
BLAST of Carg10790 vs. NCBI nr
Match: XP_022946752.1 (uncharacterized protein LOC111450724 isoform X3 [Cucurbita moschata]) HSP 1 Score: 123.6 bits (309), Expect = 9.4e-25 Identity = 61/81 (75.31%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of Carg10790 vs. NCBI nr
Match: XP_022946749.1 (uncharacterized protein LOC111450724 isoform X1 [Cucurbita moschata]) HSP 1 Score: 113.6 bits (283), Expect = 9.7e-22 Identity = 61/107 (57.01%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of Carg10790 vs. NCBI nr
Match: OWM77286.1 (hypothetical protein CDL15_Pgr028923 [Punica granatum]) HSP 1 Score: 101.7 bits (252), Expect = 3.8e-18 Identity = 71/124 (57.26%), Postives = 79/124 (63.71%), Query Frame = 0
BLAST of Carg10790 vs. NCBI nr
Match: CAN70428.1 (hypothetical protein VITISV_037530 [Vitis vinifera]) HSP 1 Score: 89.0 bits (219), Expect = 2.6e-14 Identity = 71/140 (50.71%), Postives = 86/140 (61.43%), Query Frame = 0
BLAST of Carg10790 vs. NCBI nr
Match: KZM87615.1 (hypothetical protein DCAR_031937 [Daucus carota subsp. sativus]) HSP 1 Score: 86.7 bits (213), Expect = 1.3e-13 Identity = 57/98 (58.16%), Postives = 65/98 (66.33%), Query Frame = 0
BLAST of Carg10790 vs. TrEMBL
Match: tr|A0A218WXK4|A0A218WXK4_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr028923 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.5e-18 Identity = 71/124 (57.26%), Postives = 79/124 (63.71%), Query Frame = 0
BLAST of Carg10790 vs. TrEMBL
Match: tr|A5BQH5|A5BQH5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_037530 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.7e-14 Identity = 71/140 (50.71%), Postives = 86/140 (61.43%), Query Frame = 0
BLAST of Carg10790 vs. TrEMBL
Match: tr|M5X9U8|M5X9U8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppb011302mg PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.8e-14 Identity = 59/111 (53.15%), Postives = 72/111 (64.86%), Query Frame = 0
BLAST of Carg10790 vs. TrEMBL
Match: tr|A0A164TJP9|A0A164TJP9_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_031937 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 8.4e-14 Identity = 57/98 (58.16%), Postives = 65/98 (66.33%), Query Frame = 0
BLAST of Carg10790 vs. TrEMBL
Match: tr|M4DFB5|M4DFB5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.3e-11 Identity = 57/120 (47.50%), Postives = 69/120 (57.50%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |