Carg10776 (gene) Silver-seed gourd

NameCarg10776
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_034 : 124774 .. 126307 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCAGCCCTGAAGATGATACAGCAAAACCTCGAACAAAATCTCGATGGGAGAAAGCTGCTAATCGTATGAATGGACGACATCCGGGTTCCTGCGTTTAGGGTTTTTCATTTTCTTTTGTTTAACATTTTCTTAAGCGTTCAGCTCAGGTGGGTTCGCTTTGGGCCGGGGAGTTGAAGATCAGGGCCGCTGTATCTATAGCCCAAACTGGCCACTCTCCCCATTTTCTCAACATCAATTTCTTCCTCATTGATTTAAAGAGGTTCATTCGTCACTATTGACTAGTGTAAAATCCCAAGGAAATATATATATTGGAATGAAATAAGTGGCGAGTTTTATGTCGCATCGTCGGTTGGGAAGGAGAACGAAACATCCTTTATAAGGGGTAGCAACCTTTCTCCAAGCAGTGGATCTCGACCATTACATTTGGTATCAGACTGGGTGATGTGCCAATAGGGAGGCTCTTCCCCAAAAGGGTAACACGAGGCGATGTGTCAGTAAAGACGTTGGGCCCCAAAAGAGGTGGATTAAGTGAGAAAAATGAACGAGCGCCCGTATAGACTTGGATCCTGTTGAATCCTGAAAGAGGTGGATTTAAGCCCACGGAATGTTTGAATGGATGAGTTTTGTTTAAGATAATATTTTGGGCGTGGGTGGCTATGTTAGGCGTTGGCCCCATTGGCAAATGAGTTTTAGTATCCAGTGATGGAGTCAAATTCAGCGGCCGGTGTGATCGAAATGGGTCAACTAGCCAGCTTGCGTTCGTTCTCCAATCCCTTCTTTTAGATGCGATCTTGGGTTAAACATATAAAAAATTGGACAAATCCCTTTAAATCCGAACTGGAAAACAAATTGTTTCATTAGGGTTGGATTATGACTCCAGCGAGTCACAGCTCCAGATTTAATGCTGGGAACTTTGACAGTATGAGAGCCTTCAATTTATTAATCATAAATATAATTCTTTTCTAAATAAGCTATACAAAAGAAAAAAAAAAAAAAAAAAAAGAGAGAAGAAAGATCTAAGCTGATTTCCTGGAAGGGTCAGGGTCTGACCTCAGTCCATTTCCTCAGACCCCACTCTCCAAAATCCATACTGGGCATCCTCCATTAGTGCTCCTAAACCATTCTCTCTCTGTGATCCCTTCGTCTCATTCGTACTCTTATCGCCGACCCAAGGTATGCATCTGTCTTCAAGGCTTTGTATTAACATAATTAGATTAGCTTTGATCAATAATTTAAGGGTTGTGTAGTGGTTTTGATGAATGAAGTATGAGATTTGGTGGAGGGGTTGCCGCAACTTGAAAAGGGGCTGTTCAGGTTAGATTGAGAAGAAGCAAATCGAAGAGGGGGTATATTTTTTAGTCTCTCTTACATTTTGTCCTCTGTTTTTGGTTATAAGCATTAACTTGTACTTATTTATATCCATTGGTAATCAGATCATCGAAAGTGGGGTTTGCCAGTTTTGAAGTGTTGTGTTGAATGCTGCAGAAGAGACTGCAAGCAAGAGGCTCCAAAGTCGTTCTTGCTGTTTGA

mRNA sequence

ATGTGCAGCCCTGAAGATGATACAGCAAAACCTCGAACAAAATCTCGATGGGAGAAAGCTGCTAATCGTATGAATGGACGACATCCGGGGTCTGACCTCAGTCCATTTCCTCAGACCCCACTCTCCAAAATCCATACTGGGCATCCTCCATTAGTGCTCCTAAACCATTCTCTCTCTGTGATCCCTTCGTCTCATTCGTACTCTTATCGCCGACCCAAGAAGAGACTGCAAGCAAGAGGCTCCAAAGTCGTTCTTGCTGTTTGA

Coding sequence (CDS)

ATGTGCAGCCCTGAAGATGATACAGCAAAACCTCGAACAAAATCTCGATGGGAGAAAGCTGCTAATCGTATGAATGGACGACATCCGGGGTCTGACCTCAGTCCATTTCCTCAGACCCCACTCTCCAAAATCCATACTGGGCATCCTCCATTAGTGCTCCTAAACCATTCTCTCTCTGTGATCCCTTCGTCTCATTCGTACTCTTATCGCCGACCCAAGAAGAGACTGCAAGCAAGAGGCTCCAAAGTCGTTCTTGCTGTTTGA

Protein sequence

MCSPEDDTAKPRTKSRWEKAANRMNGRHPGSDLSPFPQTPLSKIHTGHPPLVLLNHSLSVIPSSHSYSYRRPKKRLQARGSKVVLAV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10776-RACarg10776-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..87

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg10776CmaCh05G014240Cucurbita maxima (Rimu)carcmaB0802
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg10776Wax gourdcarwgoB0675
Carg10776Wax gourdcarwgoB0679
Carg10776Wax gourdcarwgoB0684
Carg10776Silver-seed gourdcarcarB104
Carg10776Silver-seed gourdcarcarB233
Carg10776Silver-seed gourdcarcarB528
Carg10776Silver-seed gourdcarcarB525
Carg10776Cucumber (Gy14) v2carcgybB0572
Carg10776Cucumber (Gy14) v2carcgybB0573
Carg10776Cucumber (Gy14) v1carcgyB0644
Carg10776Cucurbita maxima (Rimu)carcmaB0793
Carg10776Cucurbita maxima (Rimu)carcmaB0795
Carg10776Cucurbita maxima (Rimu)carcmaB0797
Carg10776Cucurbita moschata (Rifu)carcmoB0772
Carg10776Cucurbita moschata (Rifu)carcmoB0774
Carg10776Cucurbita moschata (Rifu)carcmoB0776
Carg10776Cucurbita moschata (Rifu)carcmoB0779
Carg10776Cucurbita pepo (Zucchini)carcpeB0809
Carg10776Cucurbita pepo (Zucchini)carcpeB0812
Carg10776Cucurbita pepo (Zucchini)carcpeB0814
Carg10776Cucurbita pepo (Zucchini)carcpeB0817
Carg10776Wild cucumber (PI 183967)carcpiB0602
Carg10776Wild cucumber (PI 183967)carcpiB0603
Carg10776Cucumber (Chinese Long) v2carcuB0597
Carg10776Cucumber (Chinese Long) v2carcuB0598
Carg10776Cucumber (Chinese Long) v3carcucB0604
Carg10776Cucumber (Chinese Long) v3carcucB0605
Carg10776Bottle gourd (USVL1VR-Ls)carlsiB514
Carg10776Bottle gourd (USVL1VR-Ls)carlsiB519
Carg10776Melon (DHL92) v3.5.1carmeB0573
Carg10776Melon (DHL92) v3.5.1carmeB0577
Carg10776Melon (DHL92) v3.6.1carmedB0580
Carg10776Melon (DHL92) v3.6.1carmedB0584
Carg10776Watermelon (Charleston Gray)carwcgB0555
Carg10776Watermelon (Charleston Gray)carwcgB0553
Carg10776Watermelon (97103) v1carwmB0565
Carg10776Watermelon (97103) v1carwmB0569
Carg10776Watermelon (97103) v2carwmbB0591
Carg10776Watermelon (97103) v2carwmbB0593