Carg10301 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10301
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Coproporphyrinogen III oxidase, oxygen-independent related protein
Location	Cucurbita_argyrosperma_scaffold_047 : 315544 .. 317048 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATTCAGCAGGTCGTTCTAAAATCAAGCTTTTTTCCCATTTTCTTGACCTTATCAGGCAAGCCCAATATGCGTAAAGTAGCATCTCTGTGCACCATGCCCAATATTTATGCACGTATCACGCCAAATGTTCGAGAAAATGCCTCAACCAAAACCCCCACTACCATTCCGCCTACTTCAGCCTACATCCACCTCCCTTTTTGTCGAAAGCGCTGCCACTACTGTGACTTCCCAATCGTCGCTTTGGGATCTTCCTCCTCCCAAACCGATGACGACCCTCGAATTCGGGACTACGTGGAGTTGCTTTGTCGAGAAATTAATGCCACAAAATCAGAATTCCAAACCGACCGGCCCCTCCAAACCGTCTTCTTTGGAGGTGGCACCCCTTCTCTTGTGCCGCCGAGGCTCGTCTCAGTTATCTTAGATGTGCTGGGGTCGAAATTTGGGATGGCTAAGAATGCTGAAATCTCTATTGAAATGGACCCCGGCACTTTTGATGCGAAGAAAATGGAGGGTTTGATGAAGTTGGATGTGAACAGAGTGTCTTTGGGTGTTCAGGCGTTTCAGGAAGAGTTACTCAAGGCTTGTGGAAGGGCTCATGGAGTTGATGAAGTTTATGAGGCTATTGAGATCATTAAGTCTTGTGGGCTTCAAAACTGGAGTATGGATCTCATATCTTCTCTACCTCACCAGACAGCTGAGATGTGGGAAGAGAGCTTACGCCTCACTATTGAAGCACAACCAACTCATGTTTCAGTATATGATTTGCAAGTTGAAGAAGACACAAAATTTGGGATATTGTAAGTAGCAGTGTGTTGGATATGAATAATTTAGATTGTTGCTATATGTGAAATTTGAACTTGGGCATGTGCAGGTACAAGCCAGGGGAATTTCCATTGCCTTCTGATACAGATTCAGCTGGATTCTACAGAATGGCTTCAAAGGCACTCGCTGAGGGAGGTTATAGCCATTATGAGATCAGTAGTTACTGCAAGAGAGGGTTCGAGTGCAAGCACAACTCTACCTATTGGAAGAACAATCCTTTCTATGGTTTTGGTTTAGGGGCGGCTAGTTATCTCGGTAGTTTGAGGTTCTCCAGGCCGCGGAAACTGAAGGAATACACCAATTATGTACAGAACTTAGAGAAGGGTCTTGTGGATTGCCATGGAGATAATGATGTTGATATCAAGGACATGGCCATGGATGTTGTGATGCTTTCTCTCAGAACTTCCTCAGGCCTTGATTTACAATCTTTCGGAAAAGCTTATGGTGGTCATCTTGTACATTCTCTTTGCAGGGCCTATGAACCTTACATCAAAAGTGGCCATGTGGTTTGCTTGGATGAGCAGAGGAGAGCTCTAACAGTTGATGAATGCAATGGCTTGGTCTTGAGCAAAGATGATAGTTTAACGAAGCTGAGGCACATTCGACTTAGTGATCCAGATGGGTTTTTATTATCAAACGAATTGATCTCTCTTGCATTTAGAGTCATATCTCCCTGA

mRNA sequence

ATGAACATTCAGCAGGTCGTTCTAAAATCAAGCTTTTTTCCCATTTTCTTGACCTTATCAGGCAAGCCCAATATGCGTAAAGTAGCATCTCTGTGCACCATGCCCAATATTTATGCACGTATCACGCCAAATGTTCGAGAAAATGCCTCAACCAAAACCCCCACTACCATTCCGCCTACTTCAGCCTACATCCACCTCCCTTTTTGTCGAAAGCGCTGCCACTACTGTGACTTCCCAATCGTCGCTTTGGGATCTTCCTCCTCCCAAACCGATGACGACCCTCGAATTCGGGACTACGTGGAGTTGCTTTGTCGAGAAATTAATGCCACAAAATCAGAATTCCAAACCGACCGGCCCCTCCAAACCGTCTTCTTTGGAGGTGGCACCCCTTCTCTTGTGCCGCCGAGGCTCGTCTCAGTTATCTTAGATGTGCTGGGGTCGAAATTTGGGATGGCTAAGAATGCTGAAATCTCTATTGAAATGGACCCCGGCACTTTTGATGCGAAGAAAATGGAGGGTTTGATGAAGTTGGATGTGAACAGAGTGTCTTTGGGTGTTCAGGCGTTTCAGGAAGAGTTACTCAAGGCTTGTGGAAGGGCTCATGGAGTTGATGAAGTTTATGAGGCTATTGAGATCATTAAGTCTTGTGGGCTTCAAAACTGGAGTATGGATCTCATATCTTCTCTACCTCACCAGACAGCTGAGATGTGGGAAGAGAGCTTACGCCTCACTATTGAAGCACAACCAACTCATGTTTCAGTATATGATTTGCAAGTTGAAGAAGACACAAAATTTGGGATATTGTACAAGCCAGGGGAATTTCCATTGCCTTCTGATACAGATTCAGCTGGATTCTACAGAATGGCTTCAAAGGCACTCGCTGAGGGAGGTTATAGCCATTATGAGATCAGTAGTTACTGCAAGAGAGGGTTCGAGTGCAAGCACAACTCTACCTATTGGAAGAACAATCCTTTCTATGGTTTTGGTTTAGGGGCGGCTAGTTATCTCGGTAGTTTGAGGTTCTCCAGGCCGCGGAAACTGAAGGAATACACCAATTATGTACAGAACTTAGAGAAGGGTCTTGTGGATTGCCATGGAGATAATGATGTTGATATCAAGGACATGGCCATGGATGTTGTGATGCTTTCTCTCAGAACTTCCTCAGGCCTTGATTTACAATCTTTCGGAAAAGCTTATGGTGGTCATCTTGTACATTCTCTTTGCAGGGCCTATGAACCTTACATCAAAAGTGGCCATGTGGTTTGCTTGGATGAGCAGAGGAGAGCTCTAACAGTTGATGAATGCAATGGCTTGGTCTTGAGCAAAGATGATAGTTTAACGAAGCTGAGGCACATTCGACTTAGTGATCCAGATGGGTTTTTATTATCAAACGAATTGATCTCTCTTGCATTTAGAGTCATATCTCCCTGA

Coding sequence (CDS)

ATGAACATTCAGCAGGTCGTTCTAAAATCAAGCTTTTTTCCCATTTTCTTGACCTTATCAGGCAAGCCCAATATGCGTAAAGTAGCATCTCTGTGCACCATGCCCAATATTTATGCACGTATCACGCCAAATGTTCGAGAAAATGCCTCAACCAAAACCCCCACTACCATTCCGCCTACTTCAGCCTACATCCACCTCCCTTTTTGTCGAAAGCGCTGCCACTACTGTGACTTCCCAATCGTCGCTTTGGGATCTTCCTCCTCCCAAACCGATGACGACCCTCGAATTCGGGACTACGTGGAGTTGCTTTGTCGAGAAATTAATGCCACAAAATCAGAATTCCAAACCGACCGGCCCCTCCAAACCGTCTTCTTTGGAGGTGGCACCCCTTCTCTTGTGCCGCCGAGGCTCGTCTCAGTTATCTTAGATGTGCTGGGGTCGAAATTTGGGATGGCTAAGAATGCTGAAATCTCTATTGAAATGGACCCCGGCACTTTTGATGCGAAGAAAATGGAGGGTTTGATGAAGTTGGATGTGAACAGAGTGTCTTTGGGTGTTCAGGCGTTTCAGGAAGAGTTACTCAAGGCTTGTGGAAGGGCTCATGGAGTTGATGAAGTTTATGAGGCTATTGAGATCATTAAGTCTTGTGGGCTTCAAAACTGGAGTATGGATCTCATATCTTCTCTACCTCACCAGACAGCTGAGATGTGGGAAGAGAGCTTACGCCTCACTATTGAAGCACAACCAACTCATGTTTCAGTATATGATTTGCAAGTTGAAGAAGACACAAAATTTGGGATATTGTACAAGCCAGGGGAATTTCCATTGCCTTCTGATACAGATTCAGCTGGATTCTACAGAATGGCTTCAAAGGCACTCGCTGAGGGAGGTTATAGCCATTATGAGATCAGTAGTTACTGCAAGAGAGGGTTCGAGTGCAAGCACAACTCTACCTATTGGAAGAACAATCCTTTCTATGGTTTTGGTTTAGGGGCGGCTAGTTATCTCGGTAGTTTGAGGTTCTCCAGGCCGCGGAAACTGAAGGAATACACCAATTATGTACAGAACTTAGAGAAGGGTCTTGTGGATTGCCATGGAGATAATGATGTTGATATCAAGGACATGGCCATGGATGTTGTGATGCTTTCTCTCAGAACTTCCTCAGGCCTTGATTTACAATCTTTCGGAAAAGCTTATGGTGGTCATCTTGTACATTCTCTTTGCAGGGCCTATGAACCTTACATCAAAAGTGGCCATGTGGTTTGCTTGGATGAGCAGAGGAGAGCTCTAACAGTTGATGAATGCAATGGCTTGGTCTTGAGCAAAGATGATAGTTTAACGAAGCTGAGGCACATTCGACTTAGTGATCCAGATGGGTTTTTATTATCAAACGAATTGATCTCTCTTGCATTTAGAGTCATATCTCCCTGA

Protein sequence

MNIQQVVLKSSFFPIFLTLSGKPNMRKVASLCTMPNIYARITPNVRENASTKTPTTIPPTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLEKGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHVVCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP

Homology

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BLAST of Carg10301 vs. NCBI nr
Match: XP_022987552.1 (uncharacterized protein LOC111485084 [Cucurbita maxima])

HSP 1 Score: 953.7 bits (2464), Expect = 2.3e-274
Identity = 467/476 (98.11%), Postives = 471/476 (98.95%), Query Frame = 0


Query: 1   MNIQQVVLKSSFFPIFLTLSGKPNMRKVASLCTMPNIYARITPNVRENASTKTPTTIPPT 60
           MNIQQVVLKSSFFPIFLTLS KPNMRKVASLCTMPNIYARITP+VRENASTKTPTT PPT
Sbjct: 1   MNIQQVVLKSSFFPIFLTLSSKPNMRKVASLCTMPNIYARITPSVRENASTKTPTTSPPT 60

Query: 61  SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL 120
           SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL
Sbjct: 61  SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL 120

Query: 121 QTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN 180
           +TVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN
Sbjct: 121 ETVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN 180

Query: 181 RVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEES 240
           RVSLGVQAFQEELLKACGRAHGVD+VYEAIEIIKSCGLQNWSMDLISSLPHQT EMWEES
Sbjct: 181 RVSLGVQAFQEELLKACGRAHGVDDVYEAIEIIKSCGLQNWSMDLISSLPHQTTEMWEES 240

Query: 241 LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH 300
           LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH
Sbjct: 241 LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH 300

Query: 301 YEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLEKG 360
           YEISSYCK GFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYT+YVQNLEKG
Sbjct: 301 YEISSYCKSGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTSYVQNLEKG 360

Query: 361 LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV 420
           LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV
Sbjct: 361 LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV 420

Query: 421 VCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           VCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRL DPDGFLLSNELISLAFRVISP
Sbjct: 421 VCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLGDPDGFLLSNELISLAFRVISP 476

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BLAST of Carg10301 vs. NCBI nr
Match: XP_022921974.1 (uncharacterized protein LOC111430068 [Cucurbita moschata])

HSP 1 Score: 952.6 bits (2461), Expect = 5.1e-274
Identity = 468/476 (98.32%), Postives = 471/476 (98.95%), Query Frame = 0


Query: 1   MNIQQVVLKSSFFPIFLTLSGKPNMRKVASLCTMPNIYARITPNVRENASTKTPTTIPPT 60
           MNIQQVVLKSSFFPIFLTLS KPNMRKVASLCTMPNIYARITP+VRENASTKTPTTI PT
Sbjct: 1   MNIQQVVLKSSFFPIFLTLSSKPNMRKVASLCTMPNIYARITPSVRENASTKTPTTILPT 60

Query: 61  SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL 120
           SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL
Sbjct: 61  SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL 120

Query: 121 QTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN 180
           QTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN
Sbjct: 121 QTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN 180

Query: 181 RVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEES 240
           RVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEES
Sbjct: 181 RVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEES 240

Query: 241 LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH 300
           LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH
Sbjct: 241 LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH 300

Query: 301 YEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLEKG 360
           YEISSYCK GFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYT+YVQNLEKG
Sbjct: 301 YEISSYCKSGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTSYVQNLEKG 360

Query: 361 LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV 420
           LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV
Sbjct: 361 LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV 420

Query: 421 VCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           VCLDEQRRALTVDECN LV SKDDSLTKLRHIRLSDPDGFLLSNELISLAFRV+SP
Sbjct: 421 VCLDEQRRALTVDECNRLVFSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVVSP 476

[Close]

BLAST of Carg10301 vs. NCBI nr
Match: XP_023515780.1 (uncharacterized protein LOC111779841 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 952.2 bits (2460), Expect = 6.7e-274
Identity = 467/476 (98.11%), Postives = 471/476 (98.95%), Query Frame = 0


Query: 1   MNIQQVVLKSSFFPIFLTLSGKPNMRKVASLCTMPNIYARITPNVRENASTKTPTTIPPT 60
           MNIQQVVLKSSF PIF TLS KPNMRKVASLCTMPNIYARITP+VRENASTKTPTTIPPT
Sbjct: 1   MNIQQVVLKSSFLPIFSTLSSKPNMRKVASLCTMPNIYARITPSVRENASTKTPTTIPPT 60

Query: 61  SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL 120
           SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL
Sbjct: 61  SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL 120

Query: 121 QTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN 180
           +TVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN
Sbjct: 121 ETVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN 180

Query: 181 RVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEES 240
           RVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEES
Sbjct: 181 RVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEES 240

Query: 241 LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH 300
           LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH
Sbjct: 241 LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH 300

Query: 301 YEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLEKG 360
           YEISSYCK GFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYT+YVQNLEKG
Sbjct: 301 YEISSYCKSGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTSYVQNLEKG 360

Query: 361 LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV 420
           LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV
Sbjct: 361 LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV 420

Query: 421 VCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           VCLDEQRRALTVDECNGL+ SKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP
Sbjct: 421 VCLDEQRRALTVDECNGLLSSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 476

[Close]

BLAST of Carg10301 vs. NCBI nr
Match: XP_022135234.1 (uncharacterized protein LOC111007248 [Momordica charantia])

HSP 1 Score: 872.8 bits (2254), Expect = 5.1e-250
Identity = 421/476 (88.45%), Postives = 450/476 (94.54%), Query Frame = 0


Query: 1   MNIQQVVLKSSFFPIFLTLSGKPNMRKVASLCTMPNIYARITPNVRENASTKTPTTIPPT 60
           MNIQQ++LKSSF P+F TLSGK  M KVA+LCT PN YA++TP+VRENAST++ TTI P 
Sbjct: 1   MNIQQLMLKSSFIPLFFTLSGKSKMPKVAALCTTPNFYAQVTPSVRENASTRSSTTISPA 60

Query: 61  SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPL 120
           SAYIHLPFCRKRCHYCDFPIVALGSSS QTDDDPR+R+YVELLCREI+ATKSEF  DRPL
Sbjct: 61  SAYIHLPFCRKRCHYCDFPIVALGSSSYQTDDDPRVRNYVELLCREISATKSEFGADRPL 120

Query: 121 QTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVN 180
           +TVFFGGGTPSLVPPRLVS ILDVL  KFG+AK+AEISIEMDPGTFDAKKME LMKLDVN
Sbjct: 121 ETVFFGGGTPSLVPPRLVSSILDVLRLKFGLAKDAEISIEMDPGTFDAKKMEDLMKLDVN 180

Query: 181 RVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEES 240
           RVSLGVQAFQEELLKACGRAHGV EVYEAIEIIKSCGL+NWSMDLISSLPHQ AEMWEES
Sbjct: 181 RVSLGVQAFQEELLKACGRAHGVHEVYEAIEIIKSCGLKNWSMDLISSLPHQAAEMWEES 240

Query: 241 LRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSH 300
           LRLTIEAQPTHVSVYDLQVEEDTKFG+LYKPGEFPLPS+TDSAGFYRMAS+ALAEGGY+H
Sbjct: 241 LRLTIEAQPTHVSVYDLQVEEDTKFGMLYKPGEFPLPSETDSAGFYRMASRALAEGGYNH 300

Query: 301 YEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLEKG 360
           YEISSYCK GFECKHNSTYWKN+PFYGFGLGAASYLG LRFSRPRKLKEYTNYV NLEKG
Sbjct: 301 YEISSYCKDGFECKHNSTYWKNSPFYGFGLGAASYLGGLRFSRPRKLKEYTNYVHNLEKG 360

Query: 361 LVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHV 420
           +VDCHGDNDVD KDMAMD+VMLSLRTSSGLDLQSFGKAYGGHLVHSLCR+Y+PYIKSGHV
Sbjct: 361 MVDCHGDNDVDAKDMAMDIVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRSYQPYIKSGHV 420

Query: 421 VCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           VCLDEQRRALTVDECN L+LS+DD+L +LRHIRL DPDGFLLSNELISLAFRVISP
Sbjct: 421 VCLDEQRRALTVDECNDLLLSEDDNLRELRHIRLGDPDGFLLSNELISLAFRVISP 476

[Close]

BLAST of Carg10301 vs. NCBI nr
Match: XP_004138067.1 (PREDICTED: radical S-adenosyl methionine domain-containing protein 1, mitochondrial [Cucumis sativus] >KGN63507.1 hypothetical protein Csa_1G002760 [Cucumis sativus])

HSP 1 Score: 865.9 bits (2236), Expect = 6.3e-248
Identity = 425/478 (88.91%), Postives = 447/478 (93.51%), Query Frame = 0


Query: 1   MNIQQVVLKSSFFPIFLTLSG-KPNMRKVASLCTMPNIYARITPNVRENASTKTP-TTIP 60
           M +  ++ KS+  PIF TLS  KPN+ +VASLCTMPN  A ITP VRENASTKTP TTIP
Sbjct: 1   MKLHHLIPKSTLLPIFFTLSSRKPNLPEVASLCTMPNFCAHITPAVRENASTKTPTTTIP 60

Query: 61  PTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDR 120
           P SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRI+ YVELLCREINATKSEFQT++
Sbjct: 61  PASAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIQHYVELLCREINATKSEFQTNQ 120

Query: 121 PLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLD 180
           PL+TVFFGGGTPSLVPPRLVSVILDVL +KFG+AK+AEISIEMDPGTFDAKKMEGLMKLD
Sbjct: 121 PLETVFFGGGTPSLVPPRLVSVILDVLRTKFGLAKDAEISIEMDPGTFDAKKMEGLMKLD 180

Query: 181 VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWE 240
           VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIK CG +NWSMDLISSLPHQTA MWE
Sbjct: 181 VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKFCGPKNWSMDLISSLPHQTASMWE 240

Query: 241 ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGY 300
           ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMAS+ALAEGGY
Sbjct: 241 ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASRALAEGGY 300

Query: 301 SHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLE 360
           SHYEISSYCK  FECKHNSTYWKNNPFYGFGLGAASYLG LRFSRPRKLKEYTNYVQNLE
Sbjct: 301 SHYEISSYCKSSFECKHNSTYWKNNPFYGFGLGAASYLGGLRFSRPRKLKEYTNYVQNLE 360

Query: 361 KGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSG 420
           KGLVDC G+NDVD+KDMAMDVVMLSLRTSSGLDLQSFGK Y G LVH LCRAYEPYIKSG
Sbjct: 361 KGLVDCRGNNDVDVKDMAMDVVMLSLRTSSGLDLQSFGKVYDGRLVHELCRAYEPYIKSG 420

Query: 421 HVVCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           HVVCLDEQRRALTVDEC+GL+L K+D+ T+LRHIRLSDPDGFLLSNELISLAFRVISP
Sbjct: 421 HVVCLDEQRRALTVDECDGLLLRKEDNFTRLRHIRLSDPDGFLLSNELISLAFRVISP 478

[Close]

BLAST of Carg10301 vs. TAIR10
Match: AT5G63290.1 (Radical SAM superfamily protein)

HSP 1 Score: 612.8 bits (1579), Expect = 1.7e-175
Identity = 297/484 (61.36%), Postives = 369/484 (76.24%), Query Frame = 0


Query: 7   VLKSSFFPIFLTLSGKPNMRKVASLCTMPNIYARIT-PNVRENASTKTPTTI--PPTSAY 66
           +LK++  PIF + +GKP             +  + T P+ R NAST   T    PPTSAY
Sbjct: 1   MLKTTISPIFSSFTGKPKCSSKLFFRAFSKVVLQDTPPSARRNASTNLTTLHKGPPTSAY 60

Query: 67  IHLPFCRKRCHYCDFPIVALGSSSSQT----------DDDPRIRDYVELLCREINATKSE 126
           +HLPFCRKRCHYCDFPI+ALG SSS            +DDPRI +YV LL REI AT+++
Sbjct: 61  VHLPFCRKRCHYCDFPILALGMSSSSARPSNVYEEGKEDDPRITNYVNLLVREIKATRTD 120

Query: 127 FQTDRPLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEG 186
           F T+  L+TVFFGGGTPSLVPP+LVS+IL+ L   FG++ +AEIS+EMDPGTFD +K++ 
Sbjct: 121 FDTNPNLETVFFGGGTPSLVPPKLVSLILETLSLNFGLSPDAEISMEMDPGTFDGQKLKD 180

Query: 187 LMKLDVNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQT 246
           LMKL VNRVSLGVQAFQ+ELLKACGRAHGV +VYEAIE +K CG++NWSMDLISSLPHQT
Sbjct: 181 LMKLGVNRVSLGVQAFQDELLKACGRAHGVSQVYEAIEFVKECGVENWSMDLISSLPHQT 240

Query: 247 AEMWEESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKAL 306
            EMWEESLRL IE+QP HVSVYDLQVE+ TKFG LY PG+ PLPS+T SA FY+ AS  L
Sbjct: 241 LEMWEESLRLAIESQPNHVSVYDLQVEQGTKFGNLYTPGQSPLPSETQSAEFYKTASSML 300

Query: 307 AEGGYSHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNY 366
              GY HYE+SSY + GF+CKHN  YWKN PFY FGLG+ASY+G LRFSRPR+LKEYTNY
Sbjct: 301 RGAGYEHYEVSSYSRDGFKCKHNLIYWKNKPFYAFGLGSASYVGGLRFSRPRRLKEYTNY 360

Query: 367 VQNLEKGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEP 426
           V +LE G  +  G+ DVD+KD+A D++MLS RTS GL+L+ FG+A+G  +V S+C+ YEP
Sbjct: 361 VADLENGAANWCGNGDVDLKDVATDILMLSFRTSKGLELKEFGEAFGSEVVKSICKVYEP 420

Query: 427 YIKSGHVVCLDEQRRALTVDECNGLVLSKDDSL-TKLRHIRLSDPDGFLLSNELISLAFR 477
           Y++SGH+VCLD+ R  + +DE   LV + +  +   +R++RL DPDGFLLSNELISL+F 
Sbjct: 421 YVESGHIVCLDDMRSEVMIDEFKTLVANDEVKIEDHVRYLRLKDPDGFLLSNELISLSFG 480

[Close]

BLAST of Carg10301 vs. Swiss-Prot
Match: sp|P73245|Y1917_SYNY3 (Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1917 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.0e-80
Identity = 163/425 (38.35%), Postives = 240/425 (56.47%), Query Frame = 0


Query: 53  TPTTIPPTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKS 112
           T T + PT+AYIH+PFCR+RC YCDFPI   G  S   D    + +YVE +CREI   + 
Sbjct: 3   TGTYLMPTAAYIHIPFCRQRCFYCDFPIAVTGFQSLTLDG--WVGEYVEAVCREIAGQQH 62

Query: 113 EFQTDRPLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKME 172
           + Q   PLQTVFFGGGTPSL+P   +  IL  +    G+A +AEISIE+DPGTFD  +++
Sbjct: 63  QGQ---PLQTVFFGGGTPSLLPITGLEKILLAVDQYLGIAPDAEISIEIDPGTFDQVQLQ 122

Query: 173 GLMKLDVNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQ 232
           G   L +NR SLGVQAFQ+ LL  CGR H   ++ +A+  I    ++NWS+DLI+ LP Q
Sbjct: 123 GYKNLGINRFSLGVQAFQDNLLALCGRHHRRRDIDQALTAIAKENIENWSLDLITGLPEQ 182

Query: 233 TAEMWEESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKA 292
           TA  W  SL L + A P H+S YDL +E  T F    + G+  +P    SA FYR   + 
Sbjct: 183 TAADWHSSLTLALAAGPKHISCYDLVLEPQTVFDKWEQRGKLAVPPPERSADFYRHGQEV 242

Query: 293 LAEGGYSHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTN 352
           L + G+ HYEIS+Y + G +C+HN  YW+N P+YG G+GA SY+   RF RPR    Y  
Sbjct: 243 LTQAGFHHYEISNYGRPGHQCRHNQIYWRNLPYYGLGMGATSYIDGKRFGRPRTRNGYYQ 302

Query: 353 YVQNLEKGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGL---DLQSFGKAYGGHLVHSLCR 412
           ++++         G+    ++++ ++ +ML LR ++G+    L S  +     ++ +L  
Sbjct: 303 WLESWLNQGCPIPGERVSPLENL-LESLMLGLRLTAGVTWAQLPSVNQTEKAKILATL-- 362

Query: 413 AYEPYIKSGHVVCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISL 472
                          ++R      E N ++     +   ++    +DP+G L SN+++S 
Sbjct: 363 -----------TSFGDRRWLEFYGEDNQMLAPNQTTTETVQRFCFTDPEGILYSNQILSA 408

Query: 473 AFRVI 475
            F  +
Sbjct: 423 LFAAL 408

[Close]

BLAST of Carg10301 vs. Swiss-Prot
Match: sp|Q9CGF7|HEMW_LACLA (Oxygen-independent coproporphyrinogen-III oxidase-like protein LL1139 OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=hemN PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.7e-51
Identity = 114/337 (33.83%), Postives = 176/337 (52.23%), Query Frame = 0


Query: 59  PTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDR 118
           P SAY H+PFC   C+YCDF  V +            I  Y+E L  E  + + E     
Sbjct: 5   PNSAYFHIPFCSHICYYCDFAKVLMTGQP--------IDAYIESLIEEFQSFEIE----- 64

Query: 119 PLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLD 178
            L+T++ GGGTPS++  + +  +L  +  +  +    E ++E +PG    + ++ L    
Sbjct: 65  KLRTIYIGGGTPSVLSAQQLERLLTAIAEQLDLEVLEEFTVEANPGDLSDEVIKVLADSA 124

Query: 179 VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWE 238
           VNR+SLGVQ F   LLK  GR H   +VY+++E +K  G +N ++DLI +LP QT EM +
Sbjct: 125 VNRISLGVQTFNNALLKKIGRTHTEVQVYDSVERLKKAGFENITIDLIYALPGQTMEMVK 184

Query: 239 ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGY 298
             +   +E +  HV++Y L +E+ T F    + G   LPS+  +A  Y      LA+ GY
Sbjct: 185 SDVEKFLELKLPHVALYSLILEDHTVFMNRQRRGLLRLPSEDKNADMYEYIMDILAKNGY 244

Query: 299 SHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLE 358
           +HYE+S++   GFE KHN TYW N  +YG G GA+ YL  +R+     +  Y       E
Sbjct: 245 NHYEVSNFGLPGFESKHNITYWDNEEYYGIGAGASGYLAGIRYKNLGPVHHYLKAAPT-E 304

Query: 359 KGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSF 396
           K +     +  +  K    + + L LR  SG+ ++ F
Sbjct: 305 KRI----NEEVLSKKSQIEEEMFLGLRKKSGVLVEKF 323

[Close]

BLAST of Carg10301 vs. Swiss-Prot
Match: sp|P54304|YQER_BACSU (Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR OS=Bacillus subtilis (strain 168) OX=224308 GN=hemN PE=2 SV=3)

HSP 1 Score: 200.3 bits (508), Expect = 4.9e-50
Identity = 115/345 (33.33%), Postives = 177/345 (51.30%), Query Frame = 0


Query: 61  SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCRE-INATKSEFQTDRP 120
           SAYIH+PFC   CHYCDF    + S          + +Y+  L +E IN      Q D  
Sbjct: 3   SAYIHIPFCEHICHYCDFNKYFIQSQP--------VDEYLNALEQEMINTIAKTGQPD-- 62

Query: 121 LQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKN-AEISIEMDPGTFDAKKMEGLMKLD 180
           L+T+F GGGTP+ +    +  ++D++      + + +E ++E +P    A+K++ L +  
Sbjct: 63  LKTIFIGGGTPTSLSEEQLKKLMDMINRVLKPSSDLSEFAVEANPDDLSAEKLKILKEAG 122

Query: 181 VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWE 240
           VNR+S GVQ F+++LL+  GR H   +V+ + E  +  G +N S+DL+  LP QT +  E
Sbjct: 123 VNRLSFGVQTFEDDLLEKIGRVHKQKDVFTSFERAREIGFENISLDLMFGLPGQTLKHLE 182

Query: 241 ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGY 300
            S+   +     H SVY L VE  T F  L + G   LP     A  Y +    +   G 
Sbjct: 183 HSINTALSLDAEHYSVYSLIVEPKTVFYNLMQKGRLHLPPQEQEAEMYEIVMSKMEAHGI 242

Query: 301 SHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLE 360
             YEIS++ K G E KHN TYW N  ++GFG GA  Y+G  R      +K Y + +   E
Sbjct: 243 HQYEISNFAKAGMESKHNLTYWSNEQYFGFGAGAHGYIGGTRTVNVGPVKHYIDLI--AE 302

Query: 361 KGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHL 404
           KG       ++V  ++   + + L LR ++G+  + F + YG  L
Sbjct: 303 KGF-PYRDTHEVTTEEQIEEEMFLGLRKTAGVSKKRFAEKYGRSL 334

[Close]

BLAST of Carg10301 vs. Swiss-Prot
Match: sp|P43899|Y463_HAEIN (Oxygen-independent coproporphyrinogen-III oxidase-like protein HI_0463 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0463 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.4e-49
Identity = 106/302 (35.10%), Postives = 166/302 (54.97%), Query Frame = 0


Query: 57  IPPTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQ- 116
           +PP S YIH+P+C ++C YCDF      +S +Q  D P  +DY+  L +++ A    F+ 
Sbjct: 4   LPPLSLYIHIPWCVQKCPYCDF------NSHAQKSDIPE-QDYIYHLLQDLQADLQRFKD 63

Query: 117 --TDRPLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEG 176
               R L ++F GGGTPSL     ++ +L  +  +     N EI++E +PGT +A++ +G
Sbjct: 64  SIQQRKLHSIFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKG 123

Query: 177 LMKLDVNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQT 236
            +   + R+S+G+Q+F ++ L+  GR H   E   A+ + K  GL+++++DL+  LP+QT
Sbjct: 124 YVSAGIMRISMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQT 183

Query: 237 AEMWEESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKAL 296
            E   + LR  IE  P H+S Y L +E +T F   Y+P +  LP D      +    + L
Sbjct: 184 LEEALDDLRQAIELSPPHISWYQLTIEPNTMFA--YRPPK--LPDDDALWDIFEQGHQLL 243

Query: 297 AEGGYSHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYL----GSL-RFSRPRKLK 351
              GY  YE S+Y K GF+CKHN  YW+   +   G GA   L    G + RFS+ +  K
Sbjct: 244 TMAGYQQYETSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPK 294

[Close]

BLAST of Carg10301 vs. Swiss-Prot
Match: sp|P52062|YGGW_ECOLI (Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW OS=Escherichia coli (strain K12) OX=83333 GN=yggW PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-46
Identity = 102/276 (36.96%), Postives = 154/276 (55.80%), Query Frame = 0


Query: 57  IPPTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQT 116
           +PP S YIH+P+C ++C YCDF   AL     +   D    DYV+ L  +++     +  
Sbjct: 4   LPPLSLYIHIPWCVQKCPYCDFNSHAL---KGEVPHD----DYVQHLLNDLD-NDVAYAQ 63

Query: 117 DRPLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMK 176
            R ++T+F GGGTPSL+    +  +LD + ++  +A +AEI++E +PGT +A +     +
Sbjct: 64  GREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQR 123

Query: 177 LDVNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEM 236
             VNR+S+GVQ+F EE LK  GR HG  E   A ++    GL+++++DL+  LP Q+ E 
Sbjct: 124 AGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPDQSLEE 183

Query: 237 WEESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEG 296
               LR  IE  P H+S Y L +E +T FG   +P    LP D      +    + L   
Sbjct: 184 ALGDLRQAIELNPPHLSWYQLTIEPNTLFG--SRPP--VLPDDDALWDIFEQGHQLLTAA 243

Query: 297 GYSHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGA 333
           GY  YE S+Y K G++C+HN  YW+   + G G GA
Sbjct: 244 GYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGA 267

[Close]

BLAST of Carg10301 vs. TrEMBL
Match: tr|A0A0A0LRX8|A0A0A0LRX8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002760 PE=4 SV=1)

HSP 1 Score: 865.9 bits (2236), Expect = 4.2e-248
Identity = 425/478 (88.91%), Postives = 447/478 (93.51%), Query Frame = 0


Query: 1   MNIQQVVLKSSFFPIFLTLSG-KPNMRKVASLCTMPNIYARITPNVRENASTKTP-TTIP 60
           M +  ++ KS+  PIF TLS  KPN+ +VASLCTMPN  A ITP VRENASTKTP TTIP
Sbjct: 1   MKLHHLIPKSTLLPIFFTLSSRKPNLPEVASLCTMPNFCAHITPAVRENASTKTPTTTIP 60

Query: 61  PTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDR 120
           P SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRI+ YVELLCREINATKSEFQT++
Sbjct: 61  PASAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIQHYVELLCREINATKSEFQTNQ 120

Query: 121 PLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLD 180
           PL+TVFFGGGTPSLVPPRLVSVILDVL +KFG+AK+AEISIEMDPGTFDAKKMEGLMKLD
Sbjct: 121 PLETVFFGGGTPSLVPPRLVSVILDVLRTKFGLAKDAEISIEMDPGTFDAKKMEGLMKLD 180

Query: 181 VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWE 240
           VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIK CG +NWSMDLISSLPHQTA MWE
Sbjct: 181 VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKFCGPKNWSMDLISSLPHQTASMWE 240

Query: 241 ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGY 300
           ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMAS+ALAEGGY
Sbjct: 241 ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASRALAEGGY 300

Query: 301 SHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLE 360
           SHYEISSYCK  FECKHNSTYWKNNPFYGFGLGAASYLG LRFSRPRKLKEYTNYVQNLE
Sbjct: 301 SHYEISSYCKSSFECKHNSTYWKNNPFYGFGLGAASYLGGLRFSRPRKLKEYTNYVQNLE 360

Query: 361 KGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSG 420
           KGLVDC G+NDVD+KDMAMDVVMLSLRTSSGLDLQSFGK Y G LVH LCRAYEPYIKSG
Sbjct: 361 KGLVDCRGNNDVDVKDMAMDVVMLSLRTSSGLDLQSFGKVYDGRLVHELCRAYEPYIKSG 420

Query: 421 HVVCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           HVVCLDEQRRALTVDEC+GL+L K+D+ T+LRHIRLSDPDGFLLSNELISLAFRVISP
Sbjct: 421 HVVCLDEQRRALTVDECDGLLLRKEDNFTRLRHIRLSDPDGFLLSNELISLAFRVISP 478

[Close]

BLAST of Carg10301 vs. TrEMBL
Match: tr|A0A1S3CLJ7|A0A1S3CLJ7_CUCME (oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 OS=Cucumis melo OX=3656 GN=LOC103502346 PE=4 SV=1)

HSP 1 Score: 864.0 bits (2231), Expect = 1.6e-247
Identity = 423/478 (88.49%), Postives = 445/478 (93.10%), Query Frame = 0


Query: 1   MNIQQVVLKSSFFPIFLTLSGK-PNMRKVASLCTMPNIYARITPNVRENASTKTP-TTIP 60
           M +  V+ KS+F PIF TLS + PNM KV SLCTMPN  A ITP VRENASTKTP TT P
Sbjct: 1   MRLHHVIPKSTFLPIFFTLSSRTPNMPKVESLCTMPNFCAHITPTVRENASTKTPITTNP 60

Query: 61  PTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDR 120
           P SAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRI+ YVELLCREINATKSEFQT++
Sbjct: 61  PASAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIQHYVELLCREINATKSEFQTNQ 120

Query: 121 PLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLD 180
           PL+TVFFGGGTPSLVPPRLVS+ILDVL SKFG+AK+AEISIEMDPGTFDAKKME LMKLD
Sbjct: 121 PLETVFFGGGTPSLVPPRLVSLILDVLRSKFGLAKDAEISIEMDPGTFDAKKMEDLMKLD 180

Query: 181 VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWE 240
           VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCG +NWSMDLISSLPHQTA MWE
Sbjct: 181 VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGPKNWSMDLISSLPHQTASMWE 240

Query: 241 ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGY 300
           ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDS GFYRMAS+ALAEGGY
Sbjct: 241 ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSTGFYRMASRALAEGGY 300

Query: 301 SHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLE 360
           SHYEISSYCK  FECKHNSTYWKNNPFYGFGLGAASYLG LRFSRPRKLKEYTNYVQNLE
Sbjct: 301 SHYEISSYCKSSFECKHNSTYWKNNPFYGFGLGAASYLGGLRFSRPRKLKEYTNYVQNLE 360

Query: 361 KGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSG 420
           KGL+DC G+NDVD+KDMAMDVVMLSLRTSSGLDLQSFGK Y G LVH LCRAY+PYIKSG
Sbjct: 361 KGLLDCRGNNDVDVKDMAMDVVMLSLRTSSGLDLQSFGKVYDGRLVHELCRAYQPYIKSG 420

Query: 421 HVVCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           HVVCLDEQRRALTVDECNGL+L K+D+ T+LRHIRLSDPDGFLLSNELISLAFRV+SP
Sbjct: 421 HVVCLDEQRRALTVDECNGLLLRKEDNFTRLRHIRLSDPDGFLLSNELISLAFRVLSP 478

[Close]

BLAST of Carg10301 vs. TrEMBL
Match: tr|A0A2N9FJ10|A0A2N9FJ10_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14892 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 2.2e-193
Identity = 334/478 (69.87%), Postives = 391/478 (81.80%), Query Frame = 0


Query: 7   VLKSSFFPIFLTLSGKPNMRKVASLCTMPNIYARITPNVRENASTKTPTT--------IP 66
           +LKS+F P+F     KP   K+     + N +    P+VR NAS+ T  T        + 
Sbjct: 1   MLKSTFTPVFSLFPAKPRTPKLFYYSNITNTFKHNPPSVRRNASSNTILTTSTTPLSQLT 60

Query: 67  PTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDR 126
           PTSAYIHLPFCRKRCHYCDFPIVALGSSS+Q DDDPRI +YV+LLCREINATK E +T+ 
Sbjct: 61  PTSAYIHLPFCRKRCHYCDFPIVALGSSSNQPDDDPRILNYVQLLCREINATKVESKTNP 120

Query: 127 PLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLD 186
           PLQTVFFGGGTPSLVPP+LVS +L+VL  KFG++ NAEIS+EMDPGTFDAKKM+ L+ L 
Sbjct: 121 PLQTVFFGGGTPSLVPPKLVSSVLEVLRLKFGLSSNAEISMEMDPGTFDAKKMKELIGLG 180

Query: 187 VNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWE 246
           VNRVSLGVQAFQEELLKACGRAHG++EVYEAIEI+ SCG++NWSMDLISSLP+QT+EMWE
Sbjct: 181 VNRVSLGVQAFQEELLKACGRAHGLEEVYEAIEIVGSCGVENWSMDLISSLPNQTSEMWE 240

Query: 247 ESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGY 306
           ESLRLT+EA+PTHVSVYDLQVE+ TKFGILY PGEFPLPS+T SA FYRMAS  L++  Y
Sbjct: 241 ESLRLTVEAEPTHVSVYDLQVEQGTKFGILYTPGEFPLPSETQSAEFYRMASNTLSDASY 300

Query: 307 SHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLE 366
           +HYEISSYCK GFECKHN TYW+N PFYGFGLG+ASY+G LRFSRPRK+KEYT YVQNLE
Sbjct: 301 NHYEISSYCKSGFECKHNLTYWRNKPFYGFGLGSASYVGGLRFSRPRKIKEYTGYVQNLE 360

Query: 367 KGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSG 426
            G+ DC G++ V+ KD+AMDVVMLSLRTS GLDL+SF +AYGG LV SL + Y+PY++SG
Sbjct: 361 NGVADCCGNDSVEPKDVAMDVVMLSLRTSRGLDLKSFKEAYGGSLVFSLFKVYKPYVESG 420

Query: 427 HVVCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           HVVCLDE RR +  DE +  +L  D     L +IRLSDPDGFLLSNELI+LAF  I+P
Sbjct: 421 HVVCLDEHRRVVPADELSTALLDVDRIEKSLAYIRLSDPDGFLLSNELIALAFGAIAP 478

[Close]

BLAST of Carg10301 vs. TrEMBL
Match: tr|A0A067KFD5|A0A067KFD5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11351 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 1.3e-188
Identity = 331/471 (70.28%), Postives = 383/471 (81.32%), Query Frame = 0


Query: 7   VLKSSFFPIFLTLSGKPN-MRKVASLCTMPNIYARITPNVRENASTKTPTTIPPTSAYIH 66
           +LKS+F PIF T   K + ++K     T  N + + TP +++N+ST       PTSAY+H
Sbjct: 1   MLKSTFTPIFSTFPAKLSALQKFPRFTTAANAFTQSTPPIQQNSST------APTSAYVH 60

Query: 67  LPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTDRPLQTVFF 126
           LPFCRKRCHYCDFPIVALG S++ TD DPRI +Y+ELL REI +TK EF +  PLQTVFF
Sbjct: 61  LPFCRKRCHYCDFPIVALG-SANPTDADPRISNYIELLLREIVSTKPEFDSHPPLQTVFF 120

Query: 127 GGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKLDVNRVSLG 186
           GGGTPSLV P LVS ILD L  KFG+ ++AEIS+EMDPGTFDA KME LM L VNRVSLG
Sbjct: 121 GGGTPSLVSPGLVSSILDTLKRKFGLCEDAEISMEMDPGTFDAGKMEELMGLGVNRVSLG 180

Query: 187 VQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMWEESLRLTI 246
           VQAFQEELLK+CGRAHG+ EVYEAIEII SCG+QNWS+DLISSLPHQT +MWEESLR TI
Sbjct: 181 VQAFQEELLKSCGRAHGIKEVYEAIEIIGSCGVQNWSIDLISSLPHQTPQMWEESLRHTI 240

Query: 247 EAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGGYSHYEISS 306
           +AQP HVSVYDLQVE+DTKFGILY PGEFPLPS+T SA FYRMAS+ L++ GYSHYEISS
Sbjct: 241 QAQPKHVSVYDLQVEKDTKFGILYSPGEFPLPSETQSADFYRMASRILSDAGYSHYEISS 300

Query: 307 YCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNLEKGLVDCH 366
           Y K GFECKHN TYWKN PFYGFGLG+ASY+  LRFSRPRK+KEY  YVQNLE G VDC 
Sbjct: 301 YSKDGFECKHNFTYWKNKPFYGFGLGSASYINGLRFSRPRKMKEYMGYVQNLETGEVDCC 360

Query: 367 GDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKSGHVVCLDE 426
           G+N +D KDM MD+VMLSLRT+ GLDL+ F   +GG LV+SLC+ Y+PYI+SGHVVCLDE
Sbjct: 361 GNNHIDAKDMVMDIVMLSLRTARGLDLRFFANEFGGSLVYSLCKVYKPYIESGHVVCLDE 420

Query: 427 QRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           +RR LT DE N L   ++D  ++L  IRLSDPDGFLLSNELISLAFRVI+P
Sbjct: 421 ERRELTADELNTLFTHEEDIASRLGCIRLSDPDGFLLSNELISLAFRVIAP 464

[Close]

BLAST of Carg10301 vs. TrEMBL
Match: tr|A0A2C9VRI0|A0A2C9VRI0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G115100 PE=4 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 8.2e-188
Identity = 324/479 (67.64%), Postives = 387/479 (80.79%), Query Frame = 0


Query: 7   VLKSSFFPIFLTLSGK-PNMRKVASLCTMPNIYARITPNVRENASTKTPTTI-------- 66
           +LKS+F PIF +   K   ++K  S   + N + +  P + +N+S   PT          
Sbjct: 1   MLKSTFTPIFSSFPSKTTTLQKFPSYSVISNSFTQSAPPIHQNSSVSAPTVTIIPPLQHH 60

Query: 67  PPTSAYIHLPFCRKRCHYCDFPIVALGSSSSQTDDDPRIRDYVELLCREINATKSEFQTD 126
           PPTSAY+HLPFCRKRCHYCDFPIVALG S++ TDDDPRI +YVELL REI +T  EF   
Sbjct: 61  PPTSAYVHLPFCRKRCHYCDFPIVALG-SANPTDDDPRISNYVELLRREIVSTIPEFNIH 120

Query: 127 RPLQTVFFGGGTPSLVPPRLVSVILDVLGSKFGMAKNAEISIEMDPGTFDAKKMEGLMKL 186
            PL+TVFFGGGTPSLV PRLVS ILD L  KFG  +++EIS+EMDPGTFD+ KM+ LM+L
Sbjct: 121 PPLETVFFGGGTPSLVSPRLVSSILDTLRGKFGFLEDSEISMEMDPGTFDSNKMKDLMRL 180

Query: 187 DVNRVSLGVQAFQEELLKACGRAHGVDEVYEAIEIIKSCGLQNWSMDLISSLPHQTAEMW 246
            VNRVSLGVQAFQEELLKA GRAHGV EVYEA+EI++SCG++NWSMDLISSLPHQT +MW
Sbjct: 181 GVNRVSLGVQAFQEELLKAGGRAHGVKEVYEALEIMRSCGVENWSMDLISSLPHQTPQMW 240

Query: 247 EESLRLTIEAQPTHVSVYDLQVEEDTKFGILYKPGEFPLPSDTDSAGFYRMASKALAEGG 306
           EESLRLTI+AQP HVSVYDLQVE+ TKFGILY PGEFPLPS+T SA FYRMAS+ L++ G
Sbjct: 241 EESLRLTIQAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPSETQSADFYRMASQMLSDAG 300

Query: 307 YSHYEISSYCKRGFECKHNSTYWKNNPFYGFGLGAASYLGSLRFSRPRKLKEYTNYVQNL 366
           YSHYEISSYCK GFECKHN TYWKN PFYGFGLG+ASY+  +RFSRPRK++EY +YV NL
Sbjct: 301 YSHYEISSYCKDGFECKHNFTYWKNKPFYGFGLGSASYVNGVRFSRPRKMREYMDYVHNL 360

Query: 367 EKGLVDCHGDNDVDIKDMAMDVVMLSLRTSSGLDLQSFGKAYGGHLVHSLCRAYEPYIKS 426
           E G VDC+G+N +D KD+AMD++MLSLRT+ GLDL+SF   +GG L +SLC+ Y+PYI+S
Sbjct: 361 ENGAVDCYGNNHLDAKDLAMDILMLSLRTARGLDLRSFTDVFGGSLFYSLCKVYKPYIES 420

Query: 427 GHVVCLDEQRRALTVDECNGLVLSKDDSLTKLRHIRLSDPDGFLLSNELISLAFRVISP 477
           GHVVCLDE+RRA+T DE N L   +D+  ++L +IRLSDPDGFLLSNELISLAF VI+P
Sbjct: 421 GHVVCLDEERRAMTADEFNNLFTHEDEISSRLAYIRLSDPDGFLLSNELISLAFGVIAP 478

The following BLAST results are available for this feature:

BLAST of Carg10301 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987552.1	2.3e-274	98.11	uncharacterized protein LOC111485084 [Cucurbita maxima]	[more]
XP_022921974.1	5.1e-274	98.32	uncharacterized protein LOC111430068 [Cucurbita moschata]	[more]
XP_023515780.1	6.7e-274	98.11	uncharacterized protein LOC111779841 [Cucurbita pepo subsp. pepo]	[more]
XP_022135234.1	5.1e-250	88.45	uncharacterized protein LOC111007248 [Momordica charantia]	[more]
XP_004138067.1	6.3e-248	88.91	PREDICTED: radical S-adenosyl methionine domain-containing protein 1, mitochondr...	[more]

BLAST of Carg10301 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63290.1	1.7e-175	61.36	Radical SAM superfamily protein	[more]

BLAST of Carg10301 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P73245\|Y1917_SYNY3	2.0e-80	38.35	Oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 OS=Synech...	[more]
sp\|Q9CGF7\|HEMW_LACLA	5.7e-51	33.83	Oxygen-independent coproporphyrinogen-III oxidase-like protein LL1139 OS=Lactoco...	[more]
sp\|P54304\|YQER_BACSU	4.9e-50	33.33	Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR OS=Bacillus ...	[more]
sp\|P43899\|Y463_HAEIN	2.4e-49	35.10	Oxygen-independent coproporphyrinogen-III oxidase-like protein HI_0463 OS=Haemop...	[more]
sp\|P52062\|YGGW_ECOLI	1.5e-46	36.96	Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW OS=Escherich...	[more]

BLAST of Carg10301 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRX8\|A0A0A0LRX8_CUCSA	4.2e-248	88.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002760 PE=4 SV=1	[more]
tr\|A0A1S3CLJ7\|A0A1S3CLJ7_CUCME	1.6e-247	88.49	oxygen-independent coproporphyrinogen-III oxidase-like protein sll1917 OS=Cucumi...	[more]
tr\|A0A2N9FJ10\|A0A2N9FJ10_FAGSY	2.2e-193	69.87	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14892 PE=4 SV=1	[more]
tr\|A0A067KFD5\|A0A067KFD5_JATCU	1.3e-188	70.28	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11351 PE=4 SV=1	[more]
tr\|A0A2C9VRI0\|A0A2C9VRI0_MANES	8.2e-188	67.64	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G115100 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006779	porphyrin-containing compound biosynthetic process
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004109	coproporphyrinogen oxidase activity
GO:0003824	catalytic activity
GO:0051536	iron-sulfur cluster binding

Vocabulary: **INTERPRO**
Term	Definition
IPR034505	Coproporphyrinogen-III_oxidase
IPR004559	HemN-like
IPR023404	rSAM_horseshoe
IPR007197	rSAM
IPR006638	Elp3/MiaB/NifB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006779	porphyrin-containing compound biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004109	coproporphyrinogen oxidase activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10301-RA	Carg10301-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 59..288 e-value: 3.8E-51 score: 185.9
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 64..243 e-value: 6.0E-20 score: 72.2
IPR007197	Radical SAM	SFLD	SFLDS00029	Radical_SAM	coord: 64..243 e-value: 8.2E-20 score: 66.4
IPR023404	Radical SAM, alpha/beta horseshoe	GENE3D	G3DSA:3.80.30.20		coord: 22..364 e-value: 5.0E-101 score: 340.1
IPR004559	Oxygen-independent coproporphyrinogen III oxidase-like	TIGRFAM	TIGR00539	TIGR00539	coord: 61..406 e-value: 2.1E-80 score: 268.5
None	No IPR available	SFLD	SFLDF00562	HemN-like,_clustered_with_hea	coord: 59..431 e-value: 0.0 score: 389.0
None	No IPR available	PANTHER	PTHR13932:SF3	SUBFAMILY NOT NAMED	coord: 8..475
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 69..276 e-value: 3.49439E-5 score: 42.7058
None	No IPR available	SUPERFAMILY	SSF102114	Radical SAM enzymes	coord: 43..425
IPR034505	Anaerobic coproporphyrinogen-III oxidase	PANTHER	PTHR13932	COPROPORPHYRINIGEN III OXIDASE	coord: 8..475

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10301	Cla019253	Watermelon (97103) v1	carwmB0356
Carg10301	Csa1G002760	Cucumber (Chinese Long) v2	carcuB0391
Carg10301	MELO3C026233	Melon (DHL92) v3.5.1	carmeB0369
Carg10301	ClCG06G017630	Watermelon (Charleston Gray)	carwcgB0357
Carg10301	CSPI01G00760	Wild cucumber (PI 183967)	carcpiB0396
Carg10301	Cucsa.196220	Cucumber (Gy14) v1	carcgyB0423
Carg10301	CmaCh10G000780	Cucurbita maxima (Rimu)	carcmaB0510
Carg10301	CmoCh10G000780	Cucurbita moschata (Rifu)	carcmoB0493
Carg10301	Lsi06G016150	Bottle gourd (USVL1VR-Ls)	carlsiB331
Carg10301	Cp4.1LG18g08790	Cucurbita pepo (Zucchini)	carcpeB0508
Carg10301	CsGy1G000810	Cucumber (Gy14) v2	carcgybB0371
Carg10301	MELO3C026233.2	Melon (DHL92) v3.6.1	carmedB0375
Carg10301	CsaV3_1G000810	Cucumber (Chinese Long) v3	carcucB0395
Carg10301	Cla97C06G127360	Watermelon (97103) v2	carwmbB0382
Carg10301	Bhi02G000425	Wax gourd	carwgoB0447

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10301	Silver-seed gourd	carcarB387
Carg10301	Silver-seed gourd	carcarB388
Carg10301	Silver-seed gourd	carcarB396
Carg10301	Cucurbita maxima (Rimu)	carcmaB0511
Carg10301	Cucurbita maxima (Rimu)	carcmaB0513
Carg10301	Cucurbita moschata (Rifu)	carcmoB0494
Carg10301	Cucurbita moschata (Rifu)	carcmoB0495
Carg10301	Cucurbita moschata (Rifu)	carcmoB0498
Carg10301	Cucurbita pepo (Zucchini)	carcpeB0513
Carg10301	Cucurbita pepo (Zucchini)	carcpeB0514
Carg10301	Watermelon (97103) v2	carwmbB0381