Carg10261 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10261
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Bidirectional sugar transporter SWEET
Location	Cucurbita_argyrosperma_scaffold_047 : 133645 .. 135245 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTTATCTTGCTCCTTCAACATCCCACTTGGGTTTTCCTTAATATATATAATGGCTCTTAGTTTTATGAACCACAACCCTTGGATTTTTGCGTTTGGTCTTCTAGGTACGAACCATGCGCATAGTATACATCCATATTCTTGTGTCTGTTTCGTTGGTTTGTGCTGATGATTTATGTACTTGTTTTGTTTGGCTTGGAACTTCACAGGCAACATTTTCTCGTTCATCGTGTTTCTGGCCCCAGTGTAAGTATATAGCCAGGAAGGCAGTATTTATGGGTGGGATTGATGTGACAGTGGGTGTATTGAATATTATTGGATGTGGTTGCAGGCCTACATTTGTAAGGGTGTGTAGAAAGAAATCAACGGAAGGATTTCAATCAATTCCGTACGTGGTGGCGTTGTTCAGCGCTCTGCTATTGATATACTATTCTACGCTGAATGCGGACGAGTTCTTTCTGATGACTATCAACTCTGTGGGCTGTTTCATTGAGACCATTTACATCGCTTTATACATTACCTATGCTCCCAAGAAGGCTCGGGTCAATATTTACTTATATTATGCTAATTCACTTAATATTCTTCATGCATGCATTCATGCATCTCGAACTAATCTCTGTTTCATTTCTCCACACTTGCAGACATTCACAGTCAGGTTTTTTCTGCTGTTGGACGTGGTTGGGTTTTGCTCGATTCTCGCAGTCACCCAATTCTTAGTGAAGCGGCCCTACCGAGCCCGAGTGATTGGCTTCATTTGTGGCGGTCTGTCCGTCAGCGTTTTTGCAGCTCCTCTCAGCATCATGGTGGGTGGACGACCCCAACTCATCTTGTTCTTTTATTATTTAATTTGCTCAACTCATTGTTATTGTTGCATGGCTTTGTAGAGGAGGGTTATCCGCACAAAGAGCGTGGAGTTCATGCCATTTAACCTCTCCTTTTTCCTCACACTCAGCGCCGTTATGTGGCTCTGCTATGGCCTGCTCCTCAAGGATTTCTACGTTGCGGTAACATCAATAAATAACGACACATACATATATATATATATATATAAATATATATATATATATGTACAAAATAAGTTGATATTAACAACTAATATTGCTCCTGACAGCTTCCAAACACATTGGGATTCACATTCGGGATGGCTCAGATGATTCTGTACGCCATTTACAGGAAACCCAGGGGGGGCTCTGAGGTAAAGCTCCCGCAGCACAAGGCGGATATTGAAACTGTAACCAAGACTACTACTAGTTTAGAGAGTCCCGAGGAGCATGAAAAAGAGGGTGAGGGTCAAGAGGCTGCTCCTGCATCCAACGGTGAGCATGCACCGCCAGCACTAGCATGTTCCAATGACAAATATTGCATGGACAACATACAAGCCCCACCCATGATCAGATGCGAGGCTTGATTCGATGCATCATTGGGTGCGCGTCTTCCCGAATCTCTCCCTCCCCACCGCGCTGTGTACTATTATAATGTCTTGTCCTGTGTCGTTATAATTAATTAGTAGTAGCTTTAATTTACGTATTTGTAAACCTTGGGAGAGCTTCCATATCCATGTAAAATTTATGTATCTAACTTTGTTTCTATGCTTAATTAT

mRNA sequence

CTCTCTTATCTTGCTCCTTCAACATCCCACTTGGGTTTTCCTTAATATATATAATGGCTCTTAGTTTTATGAACCACAACCCTTGGATTTTTGCGTTTGGTCTTCTAGGTACGAACCATGCGCATAGTATACATCCATATTCTTGTGTCTGTTTCGTTGGTTTGTGCTGATGATTTATGTACTTGTTTTGTTTGGCTTGGAACTTCACAGGCAACATTTTCTCGTTCATCGTGTTTCTGGCCCCAGTACATTCACAGTCAGGTTTTTTCTGCTGTTGGACGTGGTTGGGTTTTGCTCGATTCTCGCAGTCACCCAATTCTTAGTGAAGCGGCCCTACCGAGCCCGAGTGATTGGCTTCATTTGTGGCGGTCTGTCCGTCAGCGTTTTTGCAGCTCCTCTCAGCATCATGCTTCCAAACACATTGGGATTCACATTCGGGATGGCTCAGATGATTCTGTACGCCATTTACAGGAAACCCAGGGGGGGCTCTGAGGTAAAGCTCCCGCAGCACAAGGCGGATATTGAAACTGTAACCAAGACTACTACTAGTTTAGAGAGTCCCGAGGAGCATGAAAAAGAGGGTGAGGGTCAAGAGGCTGCTCCTGCATCCAACGGTGAGCATGCACCGCCAGCACTAGCATGTTCCAATGACAAATATTGCATGGACAACATACAAGCCCCACCCATGATCAGATGCGAGGCTTGATTCGATGCATCATTGGGTGCGCGTCTTCCCGAATCTCTCCCTCCCCACCGCGCTGTGTACTATTATAATGTCTTGTCCTGTGTCGTTATAATTAATTAGTAGTAGCTTTAATTTACGTATTTGTAAACCTTGGGAGAGCTTCCATATCCATGTAAAATTTATGTATCTAACTTTGTTTCTATGCTTAATTAT

Coding sequence (CDS)

ATGATTTATGTACTTGTTTTGTTTGGCTTGGAACTTCACAGGCAACATTTTCTCGTTCATCGTGTTTCTGGCCCCAGTACATTCACAGTCAGGTTTTTTCTGCTGTTGGACGTGGTTGGGTTTTGCTCGATTCTCGCAGTCACCCAATTCTTAGTGAAGCGGCCCTACCGAGCCCGAGTGATTGGCTTCATTTGTGGCGGTCTGTCCGTCAGCGTTTTTGCAGCTCCTCTCAGCATCATGCTTCCAAACACATTGGGATTCACATTCGGGATGGCTCAGATGATTCTGTACGCCATTTACAGGAAACCCAGGGGGGGCTCTGAGGTAAAGCTCCCGCAGCACAAGGCGGATATTGAAACTGTAACCAAGACTACTACTAGTTTAGAGAGTCCCGAGGAGCATGAAAAAGAGGGTGAGGGTCAAGAGGCTGCTCCTGCATCCAACGGTGAGCATGCACCGCCAGCACTAGCATGTTCCAATGACAAATATTGCATGGACAACATACAAGCCCCACCCATGATCAGATGCGAGGCTTGA

Protein sequence

MIYVLVLFGLELHRQHFLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIMLPNTLGFTFGMAQMILYAIYRKPRGGSEVKLPQHKADIETVTKTTTSLESPEEHEKEGEGQEAAPASNGEHAPPALACSNDKYCMDNIQAPPMIRCEA

Homology

[Close]

BLAST of Carg10261 vs. NCBI nr
Match: XP_022921427.1 (bidirectional sugar transporter SWEET12-like [Cucurbita moschata])

HSP 1 Score: 281.6 bits (719), Expect = 1.9e-72
Identity = 152/192 (79.17%), Postives = 152/192 (79.17%), Query Frame = 0


Query: 27  TFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM------ 86
           TFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM      
Sbjct: 102 TFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIMRRVIRT 161

Query: 87  ----------------------------------LPNTLGFTFGMAQMILYAIYRKPRGG 146
                                             LPNTLGFTFGMAQMILYAIYRKPRGG
Sbjct: 162 KSVEFMPFNLSFFLTLSAVMWLCYGLLLKDFYVALPNTLGFTFGMAQMILYAIYRKPRGG 221

Query: 147 SEVKLPQHKADIETVTKTTTSLESPEEHEKEGEGQEAAPASNGEHAPPALACSNDKYCMD 179
           SEVKLPQHKADIETVTKTTTSLESPEEHEKEGEGQEAAPASNGEHAPPALACSNDKYCMD
Sbjct: 222 SEVKLPQHKADIETVTKTTTSLESPEEHEKEGEGQEAAPASNGEHAPPALACSNDKYCMD 281

[Close]

BLAST of Carg10261 vs. NCBI nr
Match: XP_022988603.1 (bidirectional sugar transporter SWEET12-like [Cucurbita maxima] >XP_022988611.1 bidirectional sugar transporter SWEET12-like [Cucurbita maxima])

HSP 1 Score: 276.9 bits (707), Expect = 4.7e-71
Identity = 149/192 (77.60%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 27  TFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM------ 86
           TFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM      
Sbjct: 102 TFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIMRRVIRT 161

Query: 87  ----------------------------------LPNTLGFTFGMAQMILYAIYRKPRGG 146
                                             LPNTLGFTFGMAQMILYAIYRKPRGG
Sbjct: 162 KSVEFMPFNLSFFLTLSAVMWLCYGLLLKDFYVALPNTLGFTFGMAQMILYAIYRKPRGG 221

Query: 147 SEVKLPQHKADIETVTKTTTSLESPEEHEKEGEGQEAAPASNGEHAPPALACSNDKYCMD 179
           SEVKLPQHKADIETVTK++TSLESPEEHEKEGEGQEAAP SNGEHAPPALACSNDKYCMD
Sbjct: 222 SEVKLPQHKADIETVTKSSTSLESPEEHEKEGEGQEAAPGSNGEHAPPALACSNDKYCMD 281

[Close]

BLAST of Carg10261 vs. NCBI nr
Match: XP_023516921.1 (bidirectional sugar transporter N3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 144/192 (75.00%), Postives = 144/192 (75.00%), Query Frame = 0


Query: 27  TFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM------ 86
           TFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM      
Sbjct: 102 TFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIMRRVIRT 161

Query: 87  ----------------------------------LPNTLGFTFGMAQMILYAIYRKPRGG 146
                                             LPNTLGFTFGMAQMILYAIYRKPRGG
Sbjct: 162 KSVEFMPFNLSFFLTLSAVMWLCYGLLLKDFYVALPNTLGFTFGMAQMILYAIYRKPRGG 221

Query: 147 SEVKLPQHKADIETVTKTTTSLESPEEHEKEGEGQEAAPASNGEHAPPALACSNDKYCMD 179
           SEVKLPQHKADIETVTKTTTSLESPEE        EAAPASNGEHAPPALACSNDKYCMD
Sbjct: 222 SEVKLPQHKADIETVTKTTTSLESPEEXXXXXXXXEAAPASNGEHAPPALACSNDKYCMD 281

[Close]

BLAST of Carg10261 vs. NCBI nr
Match: XP_022988608.1 (bidirectional sugar transporter SWEET15-like [Cucurbita maxima])

HSP 1 Score: 196.8 bits (499), Expect = 6.1e-47
Identity = 99/116 (85.34%), Postives = 105/116 (90.52%), Query Frame = 0


Query: 63  FICGGLSVSVFAAPLSIMLPNTLGFTFGMAQMILYAIYRKPRGGSEVKLPQHKADIETVT 122
           ++C GL +  F     + LPNTLGFTFGMAQMILYAIYRKPRGGSEVKLPQHKADIETVT
Sbjct: 28  WLCYGLLLKDF----YVALPNTLGFTFGMAQMILYAIYRKPRGGSEVKLPQHKADIETVT 87

Query: 123 KTTTSLESPEEHEKEGEGQEAAPASNGEHAPPALACSNDKYCMDNIQAPPMIRCEA 179
           K++TSLESPEEHEKEGEGQEAAP SNGEHAPPALACSNDKYCMDNIQAPPMIRCEA
Sbjct: 88  KSSTSLESPEEHEKEGEGQEAAPGSNGEHAPPALACSNDKYCMDNIQAPPMIRCEA 139

[Close]

BLAST of Carg10261 vs. NCBI nr
Match: XP_008464392.1 (PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis melo])

HSP 1 Score: 155.6 bits (392), Expect = 1.6e-34
Identity = 103/196 (52.55%), Postives = 109/196 (55.61%), Query Frame = 0


Query: 28  FTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM------- 87
           FTVRF LLLDVVGFCSIL VTQFLVKR YRARVIGFICGGLSVSVFAAPLSIM       
Sbjct: 103 FTVRFVLLLDVVGFCSILVVTQFLVKRAYRARVIGFICGGLSVSVFAAPLSIMKKVIRTR 162

Query: 88  ---------------------------------LPNTLGFTFGMAQMILYAIYRKPRG-G 147
                                            LPNTLGFTFGMAQMILYAIYR  +   
Sbjct: 163 SVEYMPFSLSFFLTLSAVMWLCYGLFLKDLYVALPNTLGFTFGMAQMILYAIYRNAKPLP 222

Query: 148 SEVKLPQHKADIETVTKTT----TSLESPEEHEKEGEGQEAAPASNGEHAPPALACSNDK 179
           +E KLPQHKADIET    T                         SN  HA P +  +NDK
Sbjct: 223 NEEKLPQHKADIETQIVITXXXXXXXXXXXXXXXXXXXXXXXXXSNANHASP-VCNNNDK 282

[Close]

BLAST of Carg10261 vs. TAIR10
Match: AT3G48740.1 (Nodulin MtN3 family protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-12
Identity = 51/150 (34.00%), Postives = 65/150 (43.33%), Query Frame = 0


Query: 17  FLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAP 76
           FL +        TV+  LL++  GFC+IL + QFLVK   RA++IG IC G SV VFAAP
Sbjct: 91  FLAYAPKPARMLTVKMLLLMNFGGFCAILLLCQFLVKGATRAKIIGGICVGFSVCVFAAP 150

Query: 77  LSIM----------------------------------------LPNTLGFTFGMAQMIL 119
           LSI+                                         PN LGF  G  QMIL
Sbjct: 151 LSIIRTVIKTRSVEYMPFSLSLTLTISAVIWLLYGLALKDIYVAFPNVLGFALGALQMIL 210

[Close]

BLAST of Carg10261 vs. TAIR10
Match: AT5G50790.1 (Nodulin MtN3 family protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11
Identity = 44/136 (32.35%), Postives = 63/136 (46.32%), Query Frame = 0


Query: 17  FLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAP 76
           F  +      T TV+F L +DV+GF +I  +T F++    R +V+G+IC   ++SVF AP
Sbjct: 89  FFFYAPKKEKTLTVKFVLFVDVLGFGAIFVLTYFIIHANKRVQVLGYICMVFALSVFVAP 148

Query: 77  LSIM----------------------------------------LPNTLGFTFGMAQMIL 113
           L I+                                        LPN LGF FG+ QMIL
Sbjct: 149 LGIIRKVIKTKSAEFMPFGLSFFLTLSAVMWFFYGLLLKDMNIALPNVLGFIFGVLQMIL 208

[Close]

BLAST of Carg10261 vs. TAIR10
Match: AT5G23660.1 (homolog of Medicago truncatula MTN3)

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-10
Identity = 50/152 (32.89%), Postives = 67/152 (44.08%), Query Frame = 0


Query: 29  TVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM-------- 88
           TV+  LL++  GFC IL + QFL K   RA++IG IC G SV VFAAPLSI+        
Sbjct: 103 TVKLLLLMNFGGFCLILLLCQFLAKGTTRAKIIGGICVGFSVCVFAAPLSIIRTVIKTKS 162

Query: 89  --------------------------------LPNTLGFTFGMAQMILYAIYRKPRGGSE 133
                                            PN +GF  G  QMILY +Y+  +  S+
Sbjct: 163 VEYMPFSLSLTLTISAVIWLLYGLALKDIYVAFPNVIGFVLGALQMILYVVYKYCKTPSD 222

[Close]

BLAST of Carg10261 vs. TAIR10
Match: AT5G13170.1 (senescence-associated gene 29)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 36/113 (31.86%), Postives = 52/113 (46.02%), Query Frame = 0


Query: 30  VRFFLLLDVVGFCSILAVTQFLVKR-PYRARVIGFICGGLSVSVFAAPLSIM-------- 89
           ++ F+ ++V  F  IL VT F+VK  P +  V+G+IC  +SVSVFAAPL I+        
Sbjct: 104 MKLFIAMNVAFFSLILMVTHFVVKTPPLQVSVLGWICVAISVSVFAAPLMIVARVIKTKS 163

Query: 90  --------------------------------LPNTLGFTFGMAQMILYAIYR 102
                                           +PN +GF  G+ QM+LY +YR
Sbjct: 164 VEYMPFTLSFFLTISAVMWFAYGLFLNDICIAIPNVVGFVLGLLQMVLYLVYR 216

[Close]

BLAST of Carg10261 vs. TAIR10
Match: AT5G50800.1 (Nodulin MtN3 family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.5e-07
Identity = 39/113 (34.51%), Postives = 50/113 (44.25%), Query Frame = 0


Query: 29  TVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM-------- 88
           T++   LL+ +GF +I+ V + L K   R +V+G IC G SVSVFAAPLSIM        
Sbjct: 102 TLKVLGLLNFLGFAAIVLVCELLTKGSTREKVLGGICVGFSVSVFAAPLSIMRVVVRTRS 161

Query: 89  --------------------------------LPNTLGFTFGMAQMILYAIYR 102
                                           LPN LG   G  QMILY I++
Sbjct: 162 VEFMPFSLSLFLTISAVTWLFYGLAIKDFYVALPNVLGAFLGAVQMILYIIFK 214

[Close]

BLAST of Carg10261 vs. Swiss-Prot
Match: sp|Q9SMM5|SWT11_ARATH (Bidirectional sugar transporter SWEET11 OS=Arabidopsis thaliana OX=3702 GN=SWEET11 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.3e-11
Identity = 51/150 (34.00%), Postives = 65/150 (43.33%), Query Frame = 0


Query: 17  FLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAP 76
           FL +        TV+  LL++  GFC+IL + QFLVK   RA++IG IC G SV VFAAP
Sbjct: 91  FLAYAPKPARMLTVKMLLLMNFGGFCAILLLCQFLVKGATRAKIIGGICVGFSVCVFAAP 150

Query: 77  LSIM----------------------------------------LPNTLGFTFGMAQMIL 119
           LSI+                                         PN LGF  G  QMIL
Sbjct: 151 LSIIRTVIKTRSVEYMPFSLSLTLTISAVIWLLYGLALKDIYVAFPNVLGFALGALQMIL 210

[Close]

BLAST of Carg10261 vs. Swiss-Prot
Match: sp|Q9LUE3|SWT10_ARATH (Bidirectional sugar transporter SWEET10 OS=Arabidopsis thaliana OX=3702 GN=SWEET10 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.1e-10
Identity = 44/136 (32.35%), Postives = 63/136 (46.32%), Query Frame = 0


Query: 17  FLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAP 76
           F  +      T TV+F L +DV+GF +I  +T F++    R +V+G+IC   ++SVF AP
Sbjct: 89  FFFYAPKKEKTLTVKFVLFVDVLGFGAIFVLTYFIIHANKRVQVLGYICMVFALSVFVAP 148

Query: 77  LSIM----------------------------------------LPNTLGFTFGMAQMIL 113
           L I+                                        LPN LGF FG+ QMIL
Sbjct: 149 LGIIRKVIKTKSAEFMPFGLSFFLTLSAVMWFFYGLLLKDMNIALPNVLGFIFGVLQMIL 208

[Close]

BLAST of Carg10261 vs. Swiss-Prot
Match: sp|P93332|NOD3_MEDTR (Bidirectional sugar transporter N3 OS=Medicago truncatula OX=3880 GN=N3 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-09
Identity = 45/143 (31.47%), Postives = 62/143 (43.36%), Query Frame = 0


Query: 17  FLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAP 76
           ++++        T +    ++V  F  IL VT + V  P R +V+G++C  LSVSVFAAP
Sbjct: 89  YIIYAPRDARNLTFKLLSAMNVGSFALILIVTNYAVHGPLRVQVLGWVCVSLSVSVFAAP 148

Query: 77  LSIM----------------------------------------LPNTLGFTFGMAQMIL 120
           LSI+                                        LPN LG   G+ QM+L
Sbjct: 149 LSIVAQVVRTKSVEFMPFNLSFTLTLSATMWFGYGFFLKDICIXLPNVLGXVLGLLQMLL 208

[Close]

BLAST of Carg10261 vs. Swiss-Prot
Match: sp|O82587|SWT12_ARATH (Bidirectional sugar transporter SWEET12 OS=Arabidopsis thaliana OX=3702 GN=SWEET12 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-09
Identity = 50/152 (32.89%), Postives = 67/152 (44.08%), Query Frame = 0


Query: 29  TVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM-------- 88
           TV+  LL++  GFC IL + QFL K   RA++IG IC G SV VFAAPLSI+        
Sbjct: 103 TVKLLLLMNFGGFCLILLLCQFLAKGTTRAKIIGGICVGFSVCVFAAPLSIIRTVIKTKS 162

Query: 89  --------------------------------LPNTLGFTFGMAQMILYAIYRKPRGGSE 133
                                            PN +GF  G  QMILY +Y+  +  S+
Sbjct: 163 VEYMPFSLSLTLTISAVIWLLYGLALKDIYVAFPNVIGFVLGALQMILYVVYKYCKTPSD 222

[Close]

BLAST of Carg10261 vs. Swiss-Prot
Match: sp|Q6K602|SWT15_ORYSJ (Bidirectional sugar transporter SWEET15 OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET15 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.7e-09
Identity = 47/159 (29.56%), Postives = 65/159 (40.88%), Query Frame = 0


Query: 17  FLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAP 76
           +L +        T +  L L++  F  I  VT  L +   R  V+G+IC  +S+SVFAAP
Sbjct: 92  YLAYAPKSARMLTAKMLLGLNIGLFGVIALVTLLLSRGELRVHVLGWICVAVSLSVFAAP 151

Query: 77  LSIM----------------------------------------LPNTLGFTFGMAQMIL 124
           LSI+                                        LPN LGF FG+AQM L
Sbjct: 152 LSIIRLVIRTKSVEFMPFSLSFFLVLSAVIWFLYGLLKKDVFVALPNVLGFVFGVAQMAL 211

[Close]

BLAST of Carg10261 vs. TrEMBL
Match: tr|A0A1S3CLU1|A0A1S3CLU1_CUCME (Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103502295 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 103/196 (52.55%), Postives = 109/196 (55.61%), Query Frame = 0


Query: 28  FTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM------- 87
           FTVRF LLLDVVGFCSIL VTQFLVKR YRARVIGFICGGLSVSVFAAPLSIM       
Sbjct: 103 FTVRFVLLLDVVGFCSILVVTQFLVKRAYRARVIGFICGGLSVSVFAAPLSIMKKVIRTR 162

Query: 88  ---------------------------------LPNTLGFTFGMAQMILYAIYRKPRG-G 147
                                            LPNTLGFTFGMAQMILYAIYR  +   
Sbjct: 163 SVEYMPFSLSFFLTLSAVMWLCYGLFLKDLYVALPNTLGFTFGMAQMILYAIYRNAKPLP 222

Query: 148 SEVKLPQHKADIETVTKTT----TSLESPEEHEKEGEGQEAAPASNGEHAPPALACSNDK 179
           +E KLPQHKADIET    T                         SN  HA P +  +NDK
Sbjct: 223 NEEKLPQHKADIETQIVITXXXXXXXXXXXXXXXXXXXXXXXXXSNANHASP-VCNNNDK 282

[Close]

BLAST of Carg10261 vs. TrEMBL
Match: tr|A0A0A0LRP2|A0A0A0LRP2_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_1G001290 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-20
Identity = 84/224 (37.50%), Postives = 106/224 (47.32%), Query Frame = 0


Query: 4   VLVLFGLELHRQHFLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGF 63
           +L+++   L+   F +  ++    F    ++ L        +A      +R YRARVIGF
Sbjct: 59  LLLIYYSTLNADEFFLMTINSVGCFIETIYIAL-------YIAYAPKKARRAYRARVIGF 118

Query: 64  ICGGLSVSVFAAPLSIM----------------------------------------LPN 123
           ICGGLSVSVFAAPLSIM                                        LPN
Sbjct: 119 ICGGLSVSVFAAPLSIMKRVIRTRSVEYMPFSLSFFLTLSAVMWLCYGLFLKDLYVALPN 178

Query: 124 TLGFTFGMAQMILYAIYRKPRG-GSEVKLPQHKADIETVTKTTTSLESPEEHE-KEGEGQ 179
           TLGFTFGMAQMILYAIYR  +   SE KLPQHKADIET    T +  +P++H+  E + Q
Sbjct: 179 TLGFTFGMAQMILYAIYRNAKPLPSEEKLPQHKADIETQIVITATPTNPDDHQGDEHQNQ 238

[Close]

BLAST of Carg10261 vs. TrEMBL
Match: tr|A0A1R3JXE9|A0A1R3JXE9_9ROSI (Bidirectional sugar transporter SWEET OS=Corchorus olitorius OX=93759 GN=COLO4_13222 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.9e-14
Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 17  FLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAP 76
           FL +         ++ F+ ++V  F  IL  T FLVK   R +V+G+IC  +SVSVFAAP
Sbjct: 86  FLAYASKNSRMSAMKLFVSMNVGLFSLILIFTHFLVKGSIRIQVLGWICVAISVSVFAAP 145

Query: 77  LSIMLPNTLGFTFGMAQMILYAIYRKPRGGSEVKLPQHKADIETVTKTTT 127
           LSI+LPN LGF  GM QM+LY IYR  + G E +  Q    ++T+   +T
Sbjct: 146 LSIVLPNVLGFILGMIQMLLYGIYRNSQKGIEEEKKQPDQQLKTIVVLST 195

[Close]

BLAST of Carg10261 vs. TrEMBL
Match: tr|A0A2I4ELS8|A0A2I4ELS8_9ROSI (Bidirectional sugar transporter SWEET OS=Juglans regia OX=51240 GN=LOC108990744 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 55/158 (34.81%), Postives = 78/158 (49.37%), Query Frame = 0


Query: 17  FLVHRVSGPSTFTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAP 76
           ++++        T+R  LLL+V GFC +L ++QFL K P R RV+G++C   S+SVFAAP
Sbjct: 91  YIIYAPKQARMLTLRLVLLLNVGGFCVLLLLSQFLAKGPNRVRVLGWVCVAFSISVFAAP 150

Query: 77  LSIM----------------------------------------LPNTLGFTFGMAQMIL 134
           LSIM                                        LPN LGF  G+ QM+L
Sbjct: 151 LSIMRVVIRTKSVEFMPFTLSLFLTLSAVMWLLYGIALKDLYVALPNILGFILGVLQMVL 210

[Close]

BLAST of Carg10261 vs. TrEMBL
Match: tr|A0A251P8K9|A0A251P8K9_PRUPE (Bidirectional sugar transporter SWEET OS=Prunus persica OX=3760 GN=PRUPE_5G146400 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.5e-12
Identity = 52/133 (39.10%), Postives = 66/133 (49.62%), Query Frame = 0


Query: 28  FTVRFFLLLDVVGFCSILAVTQFLVKRPYRARVIGFICGGLSVSVFAAPLSIM------- 87
           F +R  LL++  GFC IL ++ FL + P R  V+G++C   SVSVFAAPLSIM       
Sbjct: 102 FALRLLLLVNFGGFCLILLLSHFLAQGPTRVEVLGWVCVAFSVSVFAAPLSIMRVVIRTK 161

Query: 88  ---------------------------------LPNTLGFTFGMAQMILYAIYRKPRG-- 119
                                             PN LGFTFG+AQMILYAIYR  +   
Sbjct: 162 SVEFMPFSLSFFLTLSAVMWLFYGLLLKDLYVACPNILGFTFGVAQMILYAIYRNKKTVL 221

The following BLAST results are available for this feature:

BLAST of Carg10261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921427.1	1.9e-72	79.17	bidirectional sugar transporter SWEET12-like [Cucurbita moschata]	[more]
XP_022988603.1	4.7e-71	77.60	bidirectional sugar transporter SWEET12-like [Cucurbita maxima] >XP_022988611.1 ...	[more]
XP_023516921.1	2.6e-66	75.00	bidirectional sugar transporter N3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022988608.1	6.1e-47	85.34	bidirectional sugar transporter SWEET15-like [Cucurbita maxima]	[more]
XP_008464392.1	1.6e-34	52.55	PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis melo]	[more]

BLAST of Carg10261 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48740.1	3.5e-12	34.00	Nodulin MtN3 family protein	[more]
AT5G50790.1	2.3e-11	32.35	Nodulin MtN3 family protein	[more]
AT5G23660.1	1.9e-10	32.89	homolog of Medicago truncatula MTN3	[more]
AT5G13170.1	1.2e-07	31.86	senescence-associated gene 29	[more]
AT5G50800.1	1.5e-07	34.51	Nodulin MtN3 family protein	[more]

BLAST of Carg10261 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SMM5\|SWT11_ARATH	6.3e-11	34.00	Bidirectional sugar transporter SWEET11 OS=Arabidopsis thaliana OX=3702 GN=SWEET...	[more]
sp\|Q9LUE3\|SWT10_ARATH	4.1e-10	32.35	Bidirectional sugar transporter SWEET10 OS=Arabidopsis thaliana OX=3702 GN=SWEET...	[more]
sp\|P93332\|NOD3_MEDTR	2.0e-09	31.47	Bidirectional sugar transporter N3 OS=Medicago truncatula OX=3880 GN=N3 PE=2 SV=...	[more]
sp\|O82587\|SWT12_ARATH	3.5e-09	32.89	Bidirectional sugar transporter SWEET12 OS=Arabidopsis thaliana OX=3702 GN=SWEET...	[more]
sp\|Q6K602\|SWT15_ORYSJ	7.7e-09	29.56	Bidirectional sugar transporter SWEET15 OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of Carg10261 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLU1\|A0A1S3CLU1_CUCME	1.0e-34	52.55	Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103502295 PE...	[more]
tr\|A0A0A0LRP2\|A0A0A0LRP2_CUCSA	1.5e-20	37.50	Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_1G001290...	[more]
tr\|A0A1R3JXE9\|A0A1R3JXE9_9ROSI	5.9e-14	43.64	Bidirectional sugar transporter SWEET OS=Corchorus olitorius OX=93759 GN=COLO4_1...	[more]
tr\|A0A2I4ELS8\|A0A2I4ELS8_9ROSI	1.3e-13	34.81	Bidirectional sugar transporter SWEET OS=Juglans regia OX=51240 GN=LOC108990744 ...	[more]
tr\|A0A251P8K9\|A0A251P8K9_PRUPE	1.5e-12	39.10	Bidirectional sugar transporter SWEET OS=Prunus persica OX=3760 GN=PRUPE_5G14640...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR018179	SWEET10

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10261-RA	Carg10261-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..152
None	No IPR available	PANTHER	PTHR10791	RAG1-ACTIVATING PROTEIN 1	coord: 18..80 coord: 79..124
IPR018179	Bidirectional sugar transporter SWEET10	PANTHER	PTHR10791:SF22	BIDIRECTIONAL SUGAR TRANSPORTER SWEET10	coord: 79..124
IPR018179	Bidirectional sugar transporter SWEET10	PANTHER	PTHR10791:SF22	BIDIRECTIONAL SUGAR TRANSPORTER SWEET10	coord: 18..80

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10261	Cla019301	Watermelon (97103) v1	carwmB0356
Carg10261	MELO3C026183	Melon (DHL92) v3.5.1	carmeB0369
Carg10261	CSPI01G00290	Wild cucumber (PI 183967)	carcpiB0396
Carg10261	CmaCh10G000380	Cucurbita maxima (Rimu)	carcmaB0510
Carg10261	CmoCh10G000340	Cucurbita moschata (Rifu)	carcmoB0493
Carg10261	Lsi06G016640	Bottle gourd (USVL1VR-Ls)	carlsiB331
Carg10261	Cp4.1LG18g09230	Cucurbita pepo (Zucchini)	carcpeB0508
Carg10261	CsGy1G000300	Cucumber (Gy14) v2	carcgybB0371
Carg10261	MELO3C026183.2	Melon (DHL92) v3.6.1	carmedB0375
Carg10261	CsaV3_1G000300	Cucumber (Chinese Long) v3	carcucB0395
Carg10261	Cla97C03G055130	Watermelon (97103) v2	carwmbB0379
Carg10261	Cla97C06G127910	Watermelon (97103) v2	carwmbB0382
Carg10261	Bhi08G001252	Wax gourd	carwgoB0445
Carg10261	Bhi02G000492	Wax gourd	carwgoB0448

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg10261	Carg24554	Silver-seed gourd	carcarB391
Carg10261	Carg07618	Silver-seed gourd	carcarB395

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10261	Silver-seed gourd	carcarB012
Carg10261	Silver-seed gourd	carcarB387
Carg10261	Silver-seed gourd	carcarB388
Carg10261	Silver-seed gourd	carcarB390
Carg10261	Cucumber (Gy14) v2	carcgybB0373
Carg10261	Cucumber (Gy14) v1	carcgyB0422
Carg10261	Cucurbita maxima (Rimu)	carcmaB0511
Carg10261	Cucurbita maxima (Rimu)	carcmaB0513
Carg10261	Cucurbita maxima (Rimu)	carcmaB0516
Carg10261	Cucurbita moschata (Rifu)	carcmoB0494
Carg10261	Cucurbita moschata (Rifu)	carcmoB0495
Carg10261	Cucurbita moschata (Rifu)	carcmoB0500
Carg10261	Cucurbita pepo (Zucchini)	carcpeB0507
Carg10261	Cucurbita pepo (Zucchini)	carcpeB0513
Carg10261	Cucurbita pepo (Zucchini)	carcpeB0514
Carg10261	Wild cucumber (PI 183967)	carcpiB0398
Carg10261	Cucumber (Chinese Long) v2	carcuB0391
Carg10261	Cucumber (Chinese Long) v2	carcuB0393
Carg10261	Cucumber (Chinese Long) v3	carcucB0397
Carg10261	Melon (DHL92) v3.5.1	carmeB0366
Carg10261	Melon (DHL92) v3.6.1	carmedB0372
Carg10261	Watermelon (Charleston Gray)	carwcgB0356
Carg10261	Watermelon (Charleston Gray)	carwcgB0357
Carg10261	Watermelon (97103) v1	carwmB0354