Carg10254 (gene) Silver-seed gourd

NameCarg10254
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_047 : 107760 .. 108102 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTACCTTGGCGAGTAGCATTCCTTGGAGAACAAAAGAGAAAACAAACCCAGGACCCACCACACTTGTGATCACAGTTGCACCATCAGGCGTCCAGTTCCCAGAGGGGAAAAACTGGGCCAAACAACTAAATGCAGAATCTTTCCCATGTAAGACCCCAAGAGACGTTATTAAGAAACCAGAATGGTGAAAACAGTACACTACAGCCAGTGGAAACAGTTGAGTCGCATCCAAGAATATGCGGCCAGACATGGTTTATTTTTGCTTCTTTTGGTGTGTTGTAGCAAGACTCTTACTTCATTCAGCATATGAAAGACTATGGGGGAAAATCGCAGTAA

mRNA sequence

ATGGAGACTACCTTGGCGAGTAGCATTCCTTGGAGAACAAAAGAGAAAACAAACCCAGGACCCACCACACTTGTGATCACAGTTGCACCATCAGGCGTCCAGTTCCCAGAGGGGAAAAACTGGGCCAAACAACTAAATGCAGAATCTTTCCCATGTAAGACCCCAAGAGACCAAGACTCTTACTTCATTCAGCATATGAAAGACTATGGGGGAAAATCGCAGTAA

Coding sequence (CDS)

ATGGAGACTACCTTGGCGAGTAGCATTCCTTGGAGAACAAAAGAGAAAACAAACCCAGGACCCACCACACTTGTGATCACAGTTGCACCATCAGGCGTCCAGTTCCCAGAGGGGAAAAACTGGGCCAAACAACTAAATGCAGAATCTTTCCCATGTAAGACCCCAAGAGACCAAGACTCTTACTTCATTCAGCATATGAAAGACTATGGGGGAAAATCGCAGTAA

Protein sequence

METTLASSIPWRTKEKTNPGPTTLVITVAPSGVQFPEGKNWAKQLNAESFPCKTPRDQDSYFIQHMKDYGGKSQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10254-RACarg10254-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg10254Wild cucumber (PI 183967)carcpiB0396
Carg10254Wild cucumber (PI 183967)carcpiB0398
Carg10254Cucumber (Chinese Long) v2carcuB0391
Carg10254Cucumber (Chinese Long) v2carcuB0393
Carg10254Cucumber (Chinese Long) v3carcucB0395
Carg10254Cucumber (Chinese Long) v3carcucB0397
Carg10254Bottle gourd (USVL1VR-Ls)carlsiB331
Carg10254Melon (DHL92) v3.5.1carmeB0366
Carg10254Melon (DHL92) v3.5.1carmeB0369
Carg10254Melon (DHL92) v3.6.1carmedB0372
Carg10254Melon (DHL92) v3.6.1carmedB0375
Carg10254Watermelon (Charleston Gray)carwcgB0356
Carg10254Watermelon (Charleston Gray)carwcgB0357
Carg10254Watermelon (97103) v1carwmB0354
Carg10254Watermelon (97103) v1carwmB0356
Carg10254Watermelon (97103) v2carwmbB0379
Carg10254Watermelon (97103) v2carwmbB0382
Carg10254Wax gourdcarwgoB0445
Carg10254Wax gourdcarwgoB0448
Carg10254Silver-seed gourdcarcarB012
Carg10254Silver-seed gourdcarcarB387
Carg10254Silver-seed gourdcarcarB388
Carg10254Silver-seed gourdcarcarB390
Carg10254Silver-seed gourdcarcarB391
Carg10254Silver-seed gourdcarcarB395
Carg10254Cucumber (Gy14) v2carcgybB0371
Carg10254Cucumber (Gy14) v2carcgybB0373
Carg10254Cucumber (Gy14) v1carcgyB0422
Carg10254Cucurbita maxima (Rimu)carcmaB0510
Carg10254Cucurbita maxima (Rimu)carcmaB0511
Carg10254Cucurbita maxima (Rimu)carcmaB0513
Carg10254Cucurbita maxima (Rimu)carcmaB0516
Carg10254Cucurbita moschata (Rifu)carcmoB0493
Carg10254Cucurbita moschata (Rifu)carcmoB0494
Carg10254Cucurbita moschata (Rifu)carcmoB0495
Carg10254Cucurbita moschata (Rifu)carcmoB0500
Carg10254Cucurbita pepo (Zucchini)carcpeB0507
Carg10254Cucurbita pepo (Zucchini)carcpeB0508
Carg10254Cucurbita pepo (Zucchini)carcpeB0513
Carg10254Cucurbita pepo (Zucchini)carcpeB0514