Carg10238 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10238
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	LEAFY-like protein
Location	Cucurbita_argyrosperma_scaffold_047 : 29840 .. 31757 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTGTGTACCCTATGCATACGCATATACACGAACACTAGCACTAGCACTAGCACCAGCACCAGCATTACATATCCAATTCCGCTAATGGATCCGGAAGCCCTCTCAGCAACTTTGTTCAAATGGGATCCTCGAGGAGTGGTGGGGGGCGGCAGCGGTGCATCCCTCCCAGCACCACTACCCCCCTACTCGCTGCGCCCCAGGGAGTTGGGACTAGGAGGCCTGGAGGAGTTGTTCCAGGCTTACGGTATCAGGTACTACACCGCCGCTAAAATTGCGGAACTCGGATTCACCGTCAGCACCCTCCTGGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTCCGTTGGGAGCTTCTGGTGGGTGAGAGGTACGGAATTAAGGCGGCTATAAGAGCCGAGCGCAGACGTCTAGATGACGAGATCGACCCCTCCAGGCGCCGTCACCTCTTGTCCAACGACACCACCACCAACGTCGTCCTCGATGCCCTCTCTCAGGAAGGTTAGATACGCCTAATTTTTCTCCTTTTGTGTAGTCAGATTGATTCCGATTACTCGCTCTCTTCCTTTTGGCTTTGAACATTTCTGTGGTAATGAACGTGTTGTATTTTAGTACATGGAAGCAGTTAAGGTTTAATAGTAAGTAGAGAGGTAGGTGATGAGTGGGTAGGTGATAAAGCATGACTGGGTGTGTGACATAATAATAGGGCTATCGGAGGAGCCGGTGCAGCAGGAGAAGGAGGTGGTGGGAAGCGGAGGCGGAGGAGGAGCGTGGGAGGCAGTTGCAGCAGCTGAGATGAGGAAGAAGCAGCGGAGGAGAAACGTATCGAAGAAGAAGCAGGTGATAGTGATGGAGGAGGATAATGAGGAAACCGAGGGAGGTGGGGAGGAGGAGGAGAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAACCAGGGGAGGTTGCACGGGGAAAGAAGAACGGCCTCGACTATCTCTTCCACCTCTATGAGCAGTGTCGTCAATTTTTGATCCAGGTCCAGAACATCGCCAAGGAACGAGGAGAAAAATGCCCCAATAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAATAATTCCACTACCATGTCATTAGAGGACTGCCTTCCCTTGCCGGCTTAATCAACTTAAGCCTCGCCCAAGTCTCTAAGTAGCCTATAATTTAGTGGATTCTGAGTTGATGGGGGGTTTTATTAAGCTTATGATATGAATGGGGCAATGGGCAATGAAGGGAAGTGAAGGAGGGGGGGTCCGTATTGCCTAAACAAAAAGTAGAAAGTGAAGGGAGAGGTGAGGTGCGTTGTCCTTGTCAAAACGTGGACAGCGCCATCAACTCTATGAATGATACTGAGGGGGCAGTCAAAGAAGGCGATAGGATAGAGGTTAAAGGACAAGGACAGTGTGATGGTAATAATAATAATAATAATAATCTGTGGTGGTGCTTTGTTTTGAAGTTTTGAATTGTTTGTGTTTATGCTATATACGATCCAGCAGGTGACGAACCAGGTGTTTAGATACGCGAAGAAGGCGGGAGCAAGTTACATAAACAAGCCCAAAATGAGACACTACGTGCACTGCTATGCGCTGCATTGTCTGGACGAGGAAGCGTCGAATTCATTGAGGAGGGTTTTCAAAGAAAGGGGCGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTCTGGTAGCCTTAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATCTGGTACGTGCCTACCAAACTCCGCCAACTCTGCCACGCCGAGCGCAACAGTTCCACAGCCTCCACCTCCGCTGCCGCCGCTCTCTTGCCTTTTTAA

mRNA sequence

TAGTTGTGTACCCTATGCATACGCATATACACGAACACTAGCACTAGCACTAGCACCAGCACCAGCATTACATATCCAATTCCGCTAATGGATCCGGAAGCCCTCTCAGCAACTTTGTTCAAATGGGATCCTCGAGGAGTGGTGGGGGGCGGCAGCGGTGCATCCCTCCCAGCACCACTACCCCCCTACTCGCTGCGCCCCAGGGAGTTGGGACTAGGAGGCCTGGAGGAGTTGTTCCAGGCTTACGGTATCAGGTACTACACCGCCGCTAAAATTGCGGAACTCGGATTCACCGTCAGCACCCTCCTGGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTCCGTTGGGAGCTTCTGGTGGGTGAGAGGTACGGAATTAAGGCGGCTATAAGAGCCGAGCGCAGACGTCTAGATGACGAGATCGACCCCTCCAGGCGCCGTCACCTCTTGTCCAACGACACCACCACCAACGTCGTCCTCGATGCCCTCTCTCAGGAAGGGCTATCGGAGGAGCCGGTGCAGCAGGAGAAGGAGGTGGTGGGAAGCGGAGGCGGAGGAGGAGCGTGGGAGGCAGTTGCAGCAGCTGAGATGAGGAAGAAGCAGCGGAGGAGAAACGTATCGAAGAAGAAGCAGGTGATAGTGATGGAGGAGGATAATGAGGAAACCGAGGGAGGTGGGGAGGAGGAGGAGAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAACCAGGGGAGGTTGCACGGGGAAAGAAGAACGGCCTCGACTATCTCTTCCACCTCTATGAGCAGTGTCGTCAATTTTTGATCCAGGTCCAGAACATCGCCAAGGAACGAGGAGAAAAATGCCCCAATAAGCAGGTGACGAACCAGGTGTTTAGATACGCGAAGAAGGCGGGAGCAAGTTACATAAACAAGCCCAAAATGAGACACTACGTGCACTGCTATGCGCTGCATTGTCTGGACGAGGAAGCGTCGAATTCATTGAGGAGGGTTTTCAAAGAAAGGGGCGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTCTGGTAGCCTTAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATCTGGTACGTGCCTACCAAACTCCGCCAACTCTGCCACGCCGAGCGCAACAGTTCCACAGCCTCCACCTCCGCTGCCGCCGCTCTCTTGCCTTTTTAA

Coding sequence (CDS)

ATGGATCCGGAAGCCCTCTCAGCAACTTTGTTCAAATGGGATCCTCGAGGAGTGGTGGGGGGCGGCAGCGGTGCATCCCTCCCAGCACCACTACCCCCCTACTCGCTGCGCCCCAGGGAGTTGGGACTAGGAGGCCTGGAGGAGTTGTTCCAGGCTTACGGTATCAGGTACTACACCGCCGCTAAAATTGCGGAACTCGGATTCACCGTCAGCACCCTCCTGGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTCCGTTGGGAGCTTCTGGTGGGTGAGAGGTACGGAATTAAGGCGGCTATAAGAGCCGAGCGCAGACGTCTAGATGACGAGATCGACCCCTCCAGGCGCCGTCACCTCTTGTCCAACGACACCACCACCAACGTCGTCCTCGATGCCCTCTCTCAGGAAGGGCTATCGGAGGAGCCGGTGCAGCAGGAGAAGGAGGTGGTGGGAAGCGGAGGCGGAGGAGGAGCGTGGGAGGCAGTTGCAGCAGCTGAGATGAGGAAGAAGCAGCGGAGGAGAAACGTATCGAAGAAGAAGCAGGTGATAGTGATGGAGGAGGATAATGAGGAAACCGAGGGAGGTGGGGAGGAGGAGGAGAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAACCAGGGGAGGTTGCACGGGGAAAGAAGAACGGCCTCGACTATCTCTTCCACCTCTATGAGCAGTGTCGTCAATTTTTGATCCAGGTCCAGAACATCGCCAAGGAACGAGGAGAAAAATGCCCCAATAAGCAGGTGACGAACCAGGTGTTTAGATACGCGAAGAAGGCGGGAGCAAGTTACATAAACAAGCCCAAAATGAGACACTACGTGCACTGCTATGCGCTGCATTGTCTGGACGAGGAAGCGTCGAATTCATTGAGGAGGGTTTTCAAAGAAAGGGGCGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTCTGGTAGCCTTAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATCTGGTACGTGCCTACCAAACTCCGCCAACTCTGCCACGCCGAGCGCAACAGTTCCACAGCCTCCACCTCCGCTGCCGCCGCTCTCTTGCCTTTTTAA

Protein sequence

MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIDPSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEVVGSGGGGGAWEAVAAAEMRKKQRRRNVSKKKQVIVMEEDNEETEGGGEEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNSSTASTSAAAALLPF

Homology

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BLAST of Carg10238 vs. NCBI nr
Match: XP_023516617.1 (floricaula/leafy homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.2 bits (1476), Expect = 6.8e-160
Identity = 383/387 (98.97%), Postives = 385/387 (99.48%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60
           MDPEALSATLFKWDPRG+VGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA
Sbjct: 1   MDPEALSATLFKWDPRGMVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120
           AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEI 
Sbjct: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEID 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300
           FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL
Sbjct: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300

Query: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVP 360
           HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVA+AAAQGWDIDAIFNAHPRLAIWYVP
Sbjct: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVP 360

Query: 361 TKLRQLCHAERNSSTASTSAAAALLPF 388
           TKLRQLCHAERNSSTASTSAAAALLPF
Sbjct: 361 TKLRQLCHAERNSSTASTSAAAALLPF 387

[Close]

BLAST of Carg10238 vs. NCBI nr
Match: XP_022921405.1 (floricaula/leafy homolog 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 385/387 (99.48%), Postives = 386/387 (99.74%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60
           MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA
Sbjct: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120
           AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX
Sbjct: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300
           FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL
Sbjct: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300

Query: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVP 360
           HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVA+AAAQGWDIDAIFNAHP LAIWYVP
Sbjct: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPHLAIWYVP 360

Query: 361 TKLRQLCHAERNSSTASTSAAAALLPF 388
           TKLRQLCHAERNSSTASTSAAAALLPF
Sbjct: 361 TKLRQLCHAERNSSTASTSAAAALLPF 387

[Close]

BLAST of Carg10238 vs. NCBI nr
Match: XP_022987258.1 (floricaula/leafy homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 567.0 bits (1460), Expect = 4.9e-158
Identity = 381/387 (98.45%), Postives = 386/387 (99.74%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60
           MDPEALSATLFKWDPRG+VGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA
Sbjct: 1   MDPEALSATLFKWDPRGMVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120
           AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRW+LLVGERYGIKAAIRAERRR+DDEIX
Sbjct: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAIRAERRRVDDEIX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300
           FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL
Sbjct: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300

Query: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVP 360
           HCLDE+ASNSLRRVFKERGENVGAWRQACYKPLVA+AAAQGWDIDAIFNAHPRLAIWYVP
Sbjct: 301 HCLDEDASNSLRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVP 360

Query: 361 TKLRQLCHAERNSSTASTSAAAALLPF 388
           TKLRQLCHAERNSSTASTSAAAA LPF
Sbjct: 361 TKLRQLCHAERNSSTASTSAAAAHLPF 387

[Close]

BLAST of Carg10238 vs. NCBI nr
Match: XP_023516618.1 (floricaula/leafy homolog 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 567.0 bits (1460), Expect = 4.9e-158
Identity = 382/387 (98.71%), Postives = 384/387 (99.22%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60
           MDPEALSATLFKWDPRG+VGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA
Sbjct: 1   MDPEALSATLFKWDPRGMVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120
           AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEI 
Sbjct: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEID 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300
           FHLYEQCRQFLIQVQNIAKERGEKCPNK VTNQVFRYAKKAGASYINKPKMRHYVHCYAL
Sbjct: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNK-VTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300

Query: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVP 360
           HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVA+AAAQGWDIDAIFNAHPRLAIWYVP
Sbjct: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVP 360

Query: 361 TKLRQLCHAERNSSTASTSAAAALLPF 388
           TKLRQLCHAERNSSTASTSAAAALLPF
Sbjct: 361 TKLRQLCHAERNSSTASTSAAAALLPF 386

[Close]

BLAST of Carg10238 vs. NCBI nr
Match: XP_022921406.1 (floricaula/leafy homolog 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 566.2 bits (1458), Expect = 8.4e-158
Identity = 384/387 (99.22%), Postives = 385/387 (99.48%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60
           MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA
Sbjct: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120
           AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX
Sbjct: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300
           FHLYEQCRQFLIQVQNIAKERGEKCPNK VTNQVFRYAKKAGASYINKPKMRHYVHCYAL
Sbjct: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNK-VTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300

Query: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVP 360
           HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVA+AAAQGWDIDAIFNAHP LAIWYVP
Sbjct: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPHLAIWYVP 360

Query: 361 TKLRQLCHAERNSSTASTSAAAALLPF 388
           TKLRQLCHAERNSSTASTSAAAALLPF
Sbjct: 361 TKLRQLCHAERNSSTASTSAAAALLPF 386

[Close]

BLAST of Carg10238 vs. TAIR10
Match: AT5G61850.1 (floral meristem identity control protein LEAFY (LFY))

HSP 1 Score: 388.7 bits (997), Expect = 4.3e-108
Identity = 306/403 (75.93%), Postives = 332/403 (82.38%), Query Frame = 0


Query: 1   MDPEALSATLFKWDP-RGVVGGGSGASLPAPLPPYSLRPRE----LGLGGLEELFQAYGI 60
           MDPE  ++ LF+W+P R +V   +   +P PL    + P+     + LGGLE LF  YGI
Sbjct: 1   MDPEGFTSGLFRWNPTRALV--QAPPPVPPPLQQQPVTPQTAAFGMRLGGLEGLFGPYGI 60

Query: 61  RYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRA----- 120
           R+YTAAKIAELGFT STL+ MKDEELE+MMNSLSHIFRWELLVGERYGIKAA+RA     
Sbjct: 61  RFYTAAKIAELGFTASTLVGMKDEELEEMMNSLSHIFRWELLVGERYGIKAAVRAXXXXX 120

Query: 121 --------ERRRLDDEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFI 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        EHPFI
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHPFI 240

Query: 241 VTEPGEVARGKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAG 300
           VTEPGEVARGKKNGLDYLFHLYEQCR+FL+QVQ IAK+RGEKCP K VTNQVFRYAKK+G
Sbjct: 241 VTEPGEVARGKKNGLDYLFHLYEQCREFLLQVQTIAKDRGEKCPTK-VTNQVFRYAKKSG 300

Query: 301 ASYINKPKMRHYVHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGW 360
           ASYINKPKMRHYVHCYALHCLDEEASN+LRR FKERGENVG+WRQACYKPLV +A   GW
Sbjct: 301 ASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGSWRQACYKPLVNIACRHGW 360

Query: 361 DIDAIFNAHPRLAIWYVPTKLRQLCHAERNSSTASTSAAAALL 386
           DIDA+FNAHPRL+IWYVPTKLRQLCH ERN++ A   AAAAL+
Sbjct: 361 DIDAVFNAHPRLSIWYVPTKLRQLCHLERNNAVA---AAAALV 397

[Close]

BLAST of Carg10238 vs. Swiss-Prot
Match: sp|O04064|FLLH_POPTR (Floricaula/leafy homolog OS=Populus trichocarpa OX=3694 GN=FL PE=2 SV=2)

HSP 1 Score: 446.8 bits (1148), Expect = 2.4e-124
Identity = 242/395 (61.27%), Postives = 268/395 (67.85%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSG--ASLPAPLPP----YSLRPRELGLGGLEELFQAYG 60
           MDPEA +A+LFKWD R +V   +     +P P  P    +++RPRE  L GLEELFQAYG
Sbjct: 1   MDPEAFTASLFKWDTRAMVPHPNRLLEMVPPPQQPPAAAFAVRPRE--LCGLEELFQAYG 60

Query: 61  IRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRR 120
           IRYYTAAKIAELGFTV+TLLDMKDEEL++MMNSLS IFRW+LLVGERYGIKAA+RAERRR
Sbjct: 61  IRYYTAAKIAELGFTVNTLLDMKDEELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRR 120

Query: 121 LDDEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           LD+E                                                        
Sbjct: 121 LDEE---------------DPRRRQLLSGDNNTNTLDALSQEGFSEEPVQQDKEAAGSGG 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKK 240
                                                + ERQREHPFIVTEPGEVARGKK
Sbjct: 181 RGTWEAVAAGERKKQSGRKKGQRKVVDLDGDGEHGGAICERQREHPFIVTEPGEVARGKK 240

Query: 241 NGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHY 300
           NGLDYLFHLYEQCR FLIQVQ+IAKERGEKCP K VTNQVFRYAKKAGASYINKPKMRHY
Sbjct: 241 NGLDYLFHLYEQCRDFLIQVQSIAKERGEKCPTK-VTNQVFRYAKKAGASYINKPKMRHY 300

Query: 301 VHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRL 360
           VHCYALHCLDE+ASN+LRR FKERGENVGAWRQACYKPLVA+A+ QGWDID+IFNAHPRL
Sbjct: 301 VHCYALHCLDEDASNALRRAFKERGENVGAWRQACYKPLVAIASRQGWDIDSIFNAHPRL 360

Query: 361 AIWYVPTKLRQLCHAERNSSTASTSAA--AALLPF 388
           AIWYVPTKLRQLC+AERNS+T+S+S +     LPF
Sbjct: 361 AIWYVPTKLRQLCYAERNSATSSSSVSGTGGHLPF 377

[Close]

BLAST of Carg10238 vs. Swiss-Prot
Match: sp|Q40505|FL2_TOBAC (Floricaula/leafy homolog 2 OS=Nicotiana tabacum OX=4097 GN=FL2 PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.6e-123
Identity = 308/395 (77.97%), Postives = 322/395 (81.52%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVV--------------GGGSGASLPAPL-PPYSLRPRELGLGG 60
           MDPEA SA+LFKWDPRG +                        PL   YS++ RE  LGG
Sbjct: 1   MDPEAFSASLFKWDPRGAMXXXXXXXXXXXXXXXXXXXXXXXXPLSAAYSIKTRE--LGG 60

Query: 61  LEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIK 120
           LEELFQAYGIRYYTAAKIAELGFTV+TLLDMKDEEL+DMMNSLS IFRWELLVGERYGIK
Sbjct: 61  LEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDDMMNSLSQIFRWELLVGERYGIK 120

Query: 121 AAIRAERRRLDDE--------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           AAIRAERRRL++E        +                 XXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 AAIRAERRRLEEEELRRRGHLLSDGGTNALDALSQEGLSXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQR 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         +SERQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNINDASGGISERQR 240

Query: 241 EHPFIVTEPGEVARGKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRY 300
           EHPFIVTEPGEVARGKKNGLDYLFHLYEQCR FLIQVQNIAKERGEKCP K VTNQVFRY
Sbjct: 241 EHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTK-VTNQVFRY 300

Query: 301 AKKAGASYINKPKMRHYVHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALA 360
           AKKAGASYINKPKMRHYVHCYALHCLDEEASN+LRR FKERGENVGAWRQACYKPLVA+A
Sbjct: 301 AKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIA 360

Query: 361 AAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERN 373
           A QGWDID IFNAHPRLAIWYVPTKLRQLCH+ER+
Sbjct: 361 ARQGWDIDTIFNAHPRLAIWYVPTKLRQLCHSERS 392

[Close]

BLAST of Carg10238 vs. Swiss-Prot
Match: sp|Q40504|FL1_TOBAC (Floricaula/leafy homolog 1 OS=Nicotiana tabacum OX=4097 GN=FL1 PE=2 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 5.6e-121
Identity = 314/406 (77.34%), Postives = 331/406 (81.53%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVV--------------GGGSGASLPAPL-PPYSLRPRELGLGG 60
           MDPEA SA+LFKWDPRG +                        PL   YS+R RE  LGG
Sbjct: 1   MDPEAFSASLFKWDPRGAMXXXXXXXXXXXXXXXXXXXXXXXXPLSAAYSIRTRE--LGG 60

Query: 61  LEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIK 120
           LEELFQAYGIRYYTAAKIAELGFTV+TLLDMKDEEL+DMMNSLS IFRWELLVGERYGIK
Sbjct: 61  LEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDDMMNSLSQIFRWELLVGERYGIK 120

Query: 121 AAIRAERRRLDDEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           AAIRAER       XXXXXXXX                XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 AAIRAERXXXXXXXXXXXXXXXSDGGTNALDALSQEGLXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM--------EVSERQR 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          +SERQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWNINDAGGGISERQR 240

Query: 241 EHPFIVTEPGEVARGKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRY 300
           EHPFIVTEPGEVARGKKNGLDYLFHLYEQCR FLIQVQNIAKERGEKCP K VTNQVFRY
Sbjct: 241 EHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTK-VTNQVFRY 300

Query: 301 AKKAGASYINKPKMRHYVHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALA 360
           AKKAGASYINKPKMRHYVHCYALHCLDEEASN+LRR FKERGENVGAWRQACYKPLVA+A
Sbjct: 301 AKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIA 360

Query: 361 AAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNSSTASTSAAAA 384
           A QGWDID IFNAHPRLAIWYVPT+LRQLCH+ER+++ A+ S++ +
Sbjct: 361 ARQGWDIDTIFNAHPRLAIWYVPTRLRQLCHSERSNAAAAASSSVS 403

[Close]

BLAST of Carg10238 vs. Swiss-Prot
Match: sp|O22621|ALF_PETHY (Protein ALF OS=Petunia hybrida OX=4102 GN=ALF PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 6.2e-120
Identity = 327/406 (80.54%), Postives = 346/406 (85.22%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPP----------------YSLRPRELGLG 60
           MDPEA SA+LFKWDPRG +       L A  PP                YS+R RE  LG
Sbjct: 1   MDPEAFSASLFKWDPRGAM-PPPNRLLEAVAPPQXXXXXXXXXXXXXXXYSIRTRE--LG 60

Query: 61  GLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGI 120
           GLEE+FQAYGIRYYTAAKI ELGFTV+TLLDMKD+EL+DMMNSLS IFRWELLVGERYGI
Sbjct: 61  GLEEMFQAYGIRYYTAAKITELGFTVNTLLDMKDDELDDMMNSLSQIFRWELLVGERYGI 120

Query: 121 KAAIRAER-------RRLDDEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           KAAIRAER              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 KAAIRAERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQR 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SERQR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERQR 240

Query: 241 EHPFIVTEPGEVARGKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRY 300
           EHPFIVTEPGEVARGKKNGLDYLFHLYEQCR FLIQVQNIAKERGEKCP K VTNQVFR+
Sbjct: 241 EHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTK-VTNQVFRF 300

Query: 301 AKKAGASYINKPKMRHYVHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALA 360
           AKKAGASYINKPKMRHYVHCYALHCLDE+ASN+LRR FKERGENVGAWRQACYKPLVA+A
Sbjct: 301 AKKAGASYINKPKMRHYVHCYALHCLDEDASNALRRAFKERGENVGAWRQACYKPLVAIA 360

Query: 361 AAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNSSTASTSAAAA 384
           A QGWDIDAIFN HPRL+IWYVPTKLRQLCH+ER+++ A+ S + +
Sbjct: 361 ARQGWDIDAIFNGHPRLSIWYVPTKLRQLCHSERSNAAAAASTSVS 402

[Close]

BLAST of Carg10238 vs. Swiss-Prot
Match: sp|P23915|FLO_ANTMA (Floricaula protein OS=Antirrhinum majus OX=4151 GN=FLO PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 6.2e-120
Identity = 298/398 (74.87%), Postives = 320/398 (80.40%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAP----------------LPPYSLRPRELGLG 60
           MDP+A    LFKWD R         +LP P                 P YS+RPRE  LG
Sbjct: 1   MDPDAF---LFKWDHR--------TALPQPNRLLDAVXXXXXXXXXXPSYSMRPRE--LG 60

Query: 61  GLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGI 120
           GLEELFQAYGIRYYTAAKIAELGFTV+TLLDM+DEEL++MMNSL  IFRW+LLVGERYGI
Sbjct: 61  GLEELFQAYGIRYYTAAKIAELGFTVNTLLDMRDEELDEMMNSLCQIFRWDLLVGERYGI 120

Query: 121 KAAIRAERRRLD-DEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           KAA+RAERRR+D +E+                          XXXXXXXXXXXXXXXXXX
Sbjct: 121 KAAVRAERRRIDEEEVRRRHLLLGDTTHALDALSQEGLSEEPXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIV 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SERQREHPFIV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERQREHPFIV 240

Query: 241 TEPGEVARGKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGA 300
           TEPGEVARGKKNGLDYLFHLYEQCR FLIQVQ IAKERGEKCP K VTNQVFRYAKKAGA
Sbjct: 241 TEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQTIAKERGEKCPTK-VTNQVFRYAKKAGA 300

Query: 301 SYINKPKMRHYVHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWD 360
           +YINKPKMRHYVHCYALHCLDE ASN+LRR FKERGENVGAWRQACYKPLVA+AA QGWD
Sbjct: 301 NYINKPKMRHYVHCYALHCLDEAASNALRRAFKERGENVGAWRQACYKPLVAIAARQGWD 360

Query: 361 IDAIFNAHPRLAIWYVPTKLRQLCHAERNSSTASTSAA 382
           ID IFNAHPRL+IWYVPTKLRQLCHAER+S+  + +++
Sbjct: 361 IDTIFNAHPRLSIWYVPTKLRQLCHAERSSAAVAATSS 384

[Close]

BLAST of Carg10238 vs. TrEMBL
Match: tr|A0A0A0LNE7|A0A0A0LNE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000050 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 1.7e-143
Identity = 357/387 (92.25%), Postives = 367/387 (94.83%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60
           MDPE LSATLFKW+PR +VGGGSGA LPAPLPPYSLRPRELGLGGLE+LFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120
           AKIAELGFTVSTL+DMKDEELEDMMNSLSHIFRW+LLVGERYGIKAA+RAE        X
Sbjct: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAEXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300
           FHLYEQCR+FLIQVQNIAKERGEKCP K VTNQVFRYAKKAGASYINKPKMRHYVHCYAL
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTK-VTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300

Query: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVP 360
           HCLDEEASN+LR VFKERGENVGAWRQACYKPLV +A  QGWDIDAIFNAHPRLAIWYVP
Sbjct: 301 HCLDEEASNALRSVFKERGENVGAWRQACYKPLVTIAGTQGWDIDAIFNAHPRLAIWYVP 360

Query: 361 TKLRQLCHAERNSSTASTSAAAALLPF 388
           TKLRQLCHAERN STASTS A+A LPF
Sbjct: 361 TKLRQLCHAERNGSTASTSTASAHLPF 386

[Close]

BLAST of Carg10238 vs. TrEMBL
Match: tr|Q9ZTG9|Q9ZTG9_CUCSA (Transcription activator LFY-like protein OS=Cucumis sativus OX=3659 GN=CFL PE=2 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 1.7e-143
Identity = 357/387 (92.25%), Postives = 367/387 (94.83%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60
           MDPE LSATLFKW+PR +VGGGSGA LPAPLPPYSLRPRELGLGGLE+LFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120
           AKIAELGFTVSTL+DMKDEELEDMMNSLSHIFRW+LLVGERYGIKAA+RAE        X
Sbjct: 61  AKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAEXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300
           FHLYEQCR+FLIQVQNIAKERGEKCP K VTNQVFRYAKKAGASYINKPKMRHYVHCYAL
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTK-VTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300

Query: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVP 360
           HCLDEEASN+LR VFKERGENVGAWRQACYKPLV +A  QGWDIDAIFNAHPRLAIWYVP
Sbjct: 301 HCLDEEASNALRSVFKERGENVGAWRQACYKPLVTIAGTQGWDIDAIFNAHPRLAIWYVP 360

Query: 361 TKLRQLCHAERNSSTASTSAAAALLPF 388
           TKLRQLCHAERN STASTS A+A LPF
Sbjct: 361 TKLRQLCHAERNGSTASTSTASAHLPF 386

[Close]

BLAST of Carg10238 vs. TrEMBL
Match: tr|A0A1S3CLA2|A0A1S3CLA2_CUCME (floricaula/leafy homolog OS=Cucumis melo OX=3656 GN=LOC103502270 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 3.6e-141
Identity = 355/387 (91.73%), Postives = 366/387 (94.57%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60
           MDPE LSATLFKW+PR +V GGSGA LPAPLPPYSLRPRELGLGGLE+LFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVAGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120
           +KIAELGFTVSTL+DMKDEELEDMMNSLSHIFRW+LLVGERYGIKAA+RAE        X
Sbjct: 61  SKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAE-XXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300
           FHLYEQCR+FLIQVQNIAKERGEKCP K VTNQVFRYAKKAGASYINKPKMRHYVHCYAL
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTK-VTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300

Query: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVP 360
           HCLDEEASN+LR VFKERGENVGAWRQACYKPLV +A  QGWDIDAIFNAHPRLAIWYVP
Sbjct: 301 HCLDEEASNALRSVFKERGENVGAWRQACYKPLVTIAGTQGWDIDAIFNAHPRLAIWYVP 360

Query: 361 TKLRQLCHAERNSSTASTSAAAALLPF 388
           TKLRQLCHAERN STASTS A+A LPF
Sbjct: 361 TKLRQLCHAERNGSTASTSTASAHLPF 385

[Close]

BLAST of Carg10238 vs. TrEMBL
Match: tr|E5GBL3|E5GBL3_CUCME (Transcription activator LFY-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 3.6e-141
Identity = 355/387 (91.73%), Postives = 366/387 (94.57%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSLRPRELGLGGLEELFQAYGIRYYTA 60
           MDPE LSATLFKW+PR +V GGSGA LPAPLPPYSLRPRELGLGGLE+LFQAYGIRYYTA
Sbjct: 1   MDPETLSATLFKWEPREMVAGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTA 60

Query: 61  AKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAERRRLDDEIX 120
           +KIAELGFTVSTL+DMKDEELEDMMNSLSHIFRW+LLVGERYGIKAA+RAE        X
Sbjct: 61  SKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAE-XXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVARGKKNGLDYL 240

Query: 241 FHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300
           FHLYEQCR+FLIQVQNIAKERGEKCP K VTNQVFRYAKKAGASYINKPKMRHYVHCYAL
Sbjct: 241 FHLYEQCREFLIQVQNIAKERGEKCPTK-VTNQVFRYAKKAGASYINKPKMRHYVHCYAL 300

Query: 301 HCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAHPRLAIWYVP 360
           HCLDEEASN+LR VFKERGENVGAWRQACYKPLV +A  QGWDIDAIFNAHPRLAIWYVP
Sbjct: 301 HCLDEEASNALRSVFKERGENVGAWRQACYKPLVTIAGTQGWDIDAIFNAHPRLAIWYVP 360

Query: 361 TKLRQLCHAERNSSTASTSAAAALLPF 388
           TKLRQLCHAERN STASTS A+A LPF
Sbjct: 361 TKLRQLCHAERNGSTASTSTASAHLPF 385

[Close]

BLAST of Carg10238 vs. TrEMBL
Match: tr|U3PJT1|U3PJT1_RHUCH (LEAFY-like protein OS=Rhus chinensis OX=289753 GN=LFY PE=2 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 3.9e-127
Identity = 303/398 (76.13%), Postives = 320/398 (80.40%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGVVGGGSGASLPAPLPPYSL---------RPRELGLGGLEELFQ 60
           MDPEA +A+LFKWDPRGVV   +        PP ++         RPRE  LGGLEELFQ
Sbjct: 1   MDPEAFTASLFKWDPRGVVPPQTRVLEQLAPPPAAISAATAFSVVRPRE--LGGLEELFQ 60

Query: 61  AYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAIRAE 120
           AYGIRYYTAAKIAELGFTV+TL+DMKDEEL++MMNSLS IFRWELLVGERYGIKAA+RAE
Sbjct: 61  AYGIRYYTAAKIAELGFTVNTLVDMKDEELDEMMNSLSQIFRWELLVGERYGIKAAVRAE 120

Query: 121 RRRLDDEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           RRRLD+E                                         XXXXXXXXXXXX
Sbjct: 121 RRRLDEE------------DSRRRHILSGDTTNAVDALSQEGLSEEPVXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEVSERQREHPFIVTEPGEVAR 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E SERQREHPFIVTEPGEVAR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGSERQREHPFIVTEPGEVAR 240

Query: 241 GKKNGLDYLFHLYEQCRQFLIQVQNIAKERGEKCPNKQVTNQVFRYAKKAGASYINKPKM 300
           GKKNGLDYLFHLYEQCR FLIQVQNIAKERGEKCP+K VTNQVFRYAKKAGASYINKPKM
Sbjct: 241 GKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPSK-VTNQVFRYAKKAGASYINKPKM 300

Query: 301 RHYVHCYALHCLDEEASNSLRRVFKERGENVGAWRQACYKPLVALAAAQGWDIDAIFNAH 360
           RHYVHCYALHCLDEEAS++LRRVFKERGENVGAWRQACYKPLV +AA QGWDIDAIFNAH
Sbjct: 301 RHYVHCYALHCLDEEASDALRRVFKERGENVGAWRQACYKPLVGIAARQGWDIDAIFNAH 360

Query: 361 PRLAIWYVPTKLRQLCHAERNSSTAST--SAAAALLPF 388
           PRLAIWYVPTKLRQLCHAERNS+ AS+  SA A  LPF
Sbjct: 361 PRLAIWYVPTKLRQLCHAERNSAAASSSVSAGADQLPF 383

The following BLAST results are available for this feature:

BLAST of Carg10238 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516617.1	6.8e-160	98.97	floricaula/leafy homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022921405.1	1.2e-159	99.48	floricaula/leafy homolog 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022987258.1	4.9e-158	98.45	floricaula/leafy homolog isoform X1 [Cucurbita maxima]	[more]
XP_023516618.1	4.9e-158	98.71	floricaula/leafy homolog 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022921406.1	8.4e-158	99.22	floricaula/leafy homolog 1-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg10238 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61850.1	4.3e-108	75.93	floral meristem identity control protein LEAFY (LFY)	[more]

BLAST of Carg10238 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04064\|FLLH_POPTR	2.4e-124	61.27	Floricaula/leafy homolog OS=Populus trichocarpa OX=3694 GN=FL PE=2 SV=2	[more]
sp\|Q40505\|FL2_TOBAC	1.6e-123	77.97	Floricaula/leafy homolog 2 OS=Nicotiana tabacum OX=4097 GN=FL2 PE=2 SV=1	[more]
sp\|Q40504\|FL1_TOBAC	5.6e-121	77.34	Floricaula/leafy homolog 1 OS=Nicotiana tabacum OX=4097 GN=FL1 PE=2 SV=1	[more]
sp\|O22621\|ALF_PETHY	6.2e-120	80.54	Protein ALF OS=Petunia hybrida OX=4102 GN=ALF PE=2 SV=1	[more]
sp\|P23915\|FLO_ANTMA	6.2e-120	74.87	Floricaula protein OS=Antirrhinum majus OX=4151 GN=FLO PE=2 SV=1	[more]

BLAST of Carg10238 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LNE7\|A0A0A0LNE7_CUCSA	1.7e-143	92.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000050 PE=4 SV=1	[more]
tr\|Q9ZTG9\|Q9ZTG9_CUCSA	1.7e-143	92.25	Transcription activator LFY-like protein OS=Cucumis sativus OX=3659 GN=CFL PE=2 ...	[more]
tr\|A0A1S3CLA2\|A0A1S3CLA2_CUCME	3.6e-141	91.73	floricaula/leafy homolog OS=Cucumis melo OX=3656 GN=LOC103502270 PE=4 SV=1	[more]
tr\|E5GBL3\|E5GBL3_CUCME	3.6e-141	91.73	Transcription activator LFY-like protein OS=Cucumis melo subsp. melo OX=412675 P...	[more]
tr\|U3PJT1\|U3PJT1_RHUCH	3.9e-127	76.13	LEAFY-like protein OS=Rhus chinensis OX=289753 GN=LFY PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002910	FLO_LFY
IPR038276	Floricaula/leafy_C_sf
IPR035079	LFY_SAM
IPR035209	FLO/LFY_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10238-RA	Carg10238-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035209	Floricaula/leafy, DNA-binding C-terminal domain	PFAM	PF17538	C_LFY_FLO	coord: 211..375 e-value: 4.3E-101 score: 335.4
IPR035079	Floricaula/Leafy protein, SAM domain	PFAM	PF01698	LFY_SAM	coord: 43..118 e-value: 1.7E-42 score: 143.1
IPR038276	Floricaula/leafy, C-terminal domain superfamily	GENE3D	G3DSA:1.10.4180.10		coord: 212..380 e-value: 5.5E-99 score: 330.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..215
IPR002910	Floricaula/leafy protein	PANTHER	PTHR36079	FAMILY NOT NAMED	coord: 1..380

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10238	Cla019325	Watermelon (97103) v1	carwmB0356
Carg10238	Csa1G000050	Cucumber (Chinese Long) v2	carcuB0391
Carg10238	MELO3C026157	Melon (DHL92) v3.5.1	carmeB0369
Carg10238	ClCG06G018380	Watermelon (Charleston Gray)	carwcgB0357
Carg10238	CSPI01G00050	Wild cucumber (PI 183967)	carcpiB0396
Carg10238	Cucsa.156880	Cucumber (Gy14) v1	carcgyB0422
Carg10238	CmaCh11G000030	Cucurbita maxima (Rimu)	carcmaB0511
Carg10238	CmaCh10G000090	Cucurbita maxima (Rimu)	carcmaB0510
Carg10238	CmoCh11G000030	Cucurbita moschata (Rifu)	carcmoB0494
Carg10238	CmoCh10G000070	Cucurbita moschata (Rifu)	carcmoB0493
Carg10238	Lsi06G016880	Bottle gourd (USVL1VR-Ls)	carlsiB331
Carg10238	Cp4.1LG18g09380	Cucurbita pepo (Zucchini)	carcpeB0508
Carg10238	Cp4.1LG04g16340	Cucurbita pepo (Zucchini)	carcpeB0514
Carg10238	CsGy1G000040	Cucumber (Gy14) v2	carcgybB0371
Carg10238	MELO3C026157.2	Melon (DHL92) v3.6.1	carmedB0375
Carg10238	CsaV3_1G000050	Cucumber (Chinese Long) v3	carcucB0395
Carg10238	Cla97C06G128190	Watermelon (97103) v2	carwmbB0382

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg10238	Carg24565	Silver-seed gourd	carcarB391

The following block(s) are covering this gene:

None