Carg10226 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10226
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Peroxisomal membrane protein PEX16
Location	Cucurbita_argyrosperma_scaffold_039 : 1178353 .. 1181510 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTCGCAATGATAATTGACGTTTGGTTTTAGTTCGTGTTTCTCTCTCCATCCAGATGCAGCCAAGTTTGTAAGGCAGTATGGAGGGTTTTCCAGATTGGCTGCTGTAATTGGGGTTCTGCAAAATTCCGGTTTCCCCTTCCCATAAATCCCAATTTGGTTCCTCCTTCTCTTCGCGCTTCTTCTCCTACAATTTCTCCCTTCATCAGCTACCTTTTCGTTTCTAGTTTCCTGAAAAGTTCACGAGCAGGATCCCTCTTTTTGAATGACCGTACCGTTGTGTTCTTAGATCCAATTTTTCTTTCGCCTGGCTATGAGGAGGGTTCTTCCTTGTTGCATCTTAGGGTTTTAGTTTGTACCAGGTTCTTGGACGATTCGAGTGTTTCTTTCTTTTGTTGCCGCTGCGTTGTGATTCTTTCAAGTCATGGAAGCTTACAAGAAGTGGGTTAGGGATAACAGAGACTACCTTCACTCTTTTGAGTCTCTTGCAAATGTGAGCACTATAGATTTCTTATCATTACCCGCTGGTTTCTCTATTTGATTTCATCTGGGAATTTATTTGGTTGACTTGTTTGTTCTTTAATCTGTACGTAAACGGTGCTGCCCTTGGCTTTTATGGCGTTCTCTATTAAGTAATATTAGCATCTTTTTGCTAGTAGTTTATTTAAAGAACGGCTTTATGTTTCCACAGTTTATTTTCTGCAAATTTAAGATGGCATGCATGTCATGATGTTGATTTGATTTTTAAAAGAATAAGAGATATAGACAACAGATGGTATCCATATGTCTGATAGCAATGAGCATGAAGAGACCATTAAGTCAATTTATTCCTTGAAAATGAAGATTGATATACTATGGTCATTTTTTGTGAGTTTTGAATGTTCAACACTAGTCGATCGCCCGGCATTTTTATTGAAATCAGTTTGGGTAAACTGCACCTAAGTGCGTTTAATGTTATTAACATGTTCATTCTACATGATTATGTTCCTGTATGAGAGTACCCGCAAACTTTCTTATATACCATGAAACATATCGTCATTTGGTTATATGGATCTTATTATATTTTGATGTTTTTGATGGTCTGTGTATTGTTTAGATATTGAAATTGTAACAGCCTAAGCCTATCGCTAGCCGATATTGTCTTTTTTGGACTTTCCCTTTTGGGTTTCCCTTCAAGGTTTTAAAACGTGTCTGGTAGGGATAGATTTCCACACTCTTGTAAAGAATGCTTCGTTCTCCTCTTCAACCAATGTGAGATCCCACTATCCACCCTCCTTTGGGGCCCAACATCCTTGTTGGCACTCGTTCGGATTGTGAGATCCCACGTCGGTTGGAGAGGGGAACAAAACATTCTTTATAAGGGTGTAAAAACTTCTCCCTAACATATGTGTTTTAAAACCTTGAGGGGAAACCCCGAAGGGAAAACCCAAAAAGGACAACATCTGTTATCGGTGGGCTTGGGCTGTTATAGAAATATAGAAAATACCGAACTATTTGCATGTCGGTGAATGAGCCTTTTTCACTGTTTGATCACAAGCAATTGTAACCCCCCTTGTAATAGATCTTTTACTGCTTGCTTGTGTTGGCCTCATTATAATGCGGAACAACCCATTCAAATTACCTTGCAATGAGAGAAATAGAGTAGATTGGCTGAAAAGTTGAACCACCTTACTTTGACAGACATGTTTAATCGATATTATTAGTACATAATCTCCTCTAGAGGTTAATCTTACGGCAATTGTAGAACAATTTTTTTGCCATTTGAAAGTAGAACTGGGATGGTGGAATCTTGTTCAAGGATCATGGAAATATCAACGTTGGATGGGTTTCCATGTGCTAATTTGGTGCATGATGTATATTGTCATCTCATGTTTGTTTGTCATAAAACAGGTTAATTTCTCGATAGTTTTTGAAAACTGTTATATTACCATGATTAAAGTCAACTGTTAGTAGATCTGAGAGTATAAGTTTGTGGATTTCTACCTTTTATATGGTTCTTAATACTGTACAGGGCTTGACGTGGCTTCTTCCTGAACGATTTTCTGATTCAGAAATTGGACCTGAAGCAGGTTTTGTGAAACTTTGGTAACACTTGACTGCTTCTTCTGAGCTTGGAATTTGTAGTGCCCTTGGGTCCCCTTTGATGAATATGCATGTCTTCATATTTGTCTCACTTTCAAATGCTATAAATTTACAGTAGACCATATCAAAAGCATTCTGATAACCAGCAAGGTTTTCTTAAGTTATTCTGTTTTCATTTTTCAACTTAGGGGTTCGAACCTCGTAACTTTGGAAGCTATCTCCCTACGTTCTAAGTTTGTACCAACAAACGTGAAAATTTAACTGCTATTTTGCTGTTTACTGGCGTTGTCTTGTCAAATGAACACGTTCCTGGCTTCTTTGTTCTAAAGTTTTGCCTTGCTCTGAGTGGATGATTTGCAACTTTGAAGCTATTATTAATTAGTTTAGGGATTTCTGCAGTTTCTGCCGCTGTTGGCATTGTCACTGCAGTCAATGAACACATAATCGAAACAGCTCCAACCCAGATGCATGTAAACGCAACTGTGCCATCTTCATTTCCTTATTCACTATGCATATCTGCTCTGAAAAACTTGGAAACATTGATTGAAGTTGCTGCACAACAATATTATGGTGATGATAAACGATGGAACTTCATTGCTGTTACGGAGGCTTTGAAGTAAGACACAGTTGATGAGTGTGGGAGTGCCATTTTTTAATCTTCTGATACATTTTTATTGCATAGTCTTTGCCTTTACATTAGTAGCCGTTGAATTTCAGGGTACTCTTTAGATTAGCTCTGTTCAAGAATTGTGGGTACAAGATCCTTCTTGATGGAGGAGAAACCATAAATAACGAAAGACATCTGAAAACTTCAACTTCTCAGCACAGACCTAATGCTTTCACAAAGCATGGTGGGCATAATGCATCTGGTTATTCAGGATATCTTAATGGACATGACCAATGGAATCTAGAAGGGAGGGCATTATCTGCATTAAGCAGGTTCGGGGAAAAGGCTCGGATGATTTCACCACCAGCATGGTCGTATGGGGTTCAGCACCAGCATGGAATGTTCAATCCTTCAGGTGCCTATATCGATCCCAAGTTCCTAGAGTTTTGTGGGGGGAATGTCTACTGA

mRNA sequence

TTTGTTCGCAATGATAATTGACGTTTGGTTTTAGTTCGTGTTTCTCTCTCCATCCAGATGCAGCCAAGTTTGTAAGGCAGTATGGAGGGTTTTCCAGATTGGCTGCTGTAATTGGGGTTCTGCAAAATTCCGGTTTCCCCTTCCCATAAATCCCAATTTGGTTCCTCCTTCTCTTCGCGCTTCTTCTCCTACAATTTCTCCCTTCATCAGCTACCTTTTCGTTTCTAGTTTCCTGAAAAGTTCACGAGCAGGATCCCTCTTTTTGAATGACCGTACCGTTGTGTTCTTAGATCCAATTTTTCTTTCGCCTGGCTATGAGGAGGGTTCTTCCTTGTTGCATCTTAGGGTTTTAGTTTGTACCAGGTTCTTGGACGATTCGAGTGTTTCTTTCTTTTGTTGCCGCTGCGTTGTGATTCTTTCAAGTCATGGAAGCTTACAAGAAGTGGGTTAGGGATAACAGAGACTACCTTCACTCTTTTGAGTCTCTTGCAAATGGCTTGACGTGGCTTCTTCCTGAACGATTTTCTGATTCAGAAATTGGACCTGAAGCAGTTTCTGCCGCTGTTGGCATTGTCACTGCAGTCAATGAACACATAATCGAAACAGCTCCAACCCAGATGCATGTAAACGCAACTGTGCCATCTTCATTTCCTTATTCACTATGCATATCTGCTCTGAAAAACTTGGAAACATTGATTGAAGTTGCTGCACAACAATATTATGGTGATGATAAACGATGGAACTTCATTGCTGTTACGGAGGCTTTGAAGGTACTCTTTAGATTAGCTCTGTTCAAGAATTGTGGGTACAAGATCCTTCTTGATGGAGGAGAAACCATAAATAACGAAAGACATCTGAAAACTTCAACTTCTCAGCACAGACCTAATGCTTTCACAAAGCATGGTGGGCATAATGCATCTGGTTATTCAGGATATCTTAATGGACATGACCAATGGAATCTAGAAGGGAGGGCATTATCTGCATTAAGCAGGTTCGGGGAAAAGGCTCGGATGATTTCACCACCAGCATGGTCGTATGGGGTTCAGCACCAGCATGGAATGTTCAATCCTTCAGGTGCCTATATCGATCCCAAGTTCCTAGAGTTTTGTGGGGGGAATGTCTACTGA

Coding sequence (CDS)

ATGGAAGCTTACAAGAAGTGGGTTAGGGATAACAGAGACTACCTTCACTCTTTTGAGTCTCTTGCAAATGGCTTGACGTGGCTTCTTCCTGAACGATTTTCTGATTCAGAAATTGGACCTGAAGCAGTTTCTGCCGCTGTTGGCATTGTCACTGCAGTCAATGAACACATAATCGAAACAGCTCCAACCCAGATGCATGTAAACGCAACTGTGCCATCTTCATTTCCTTATTCACTATGCATATCTGCTCTGAAAAACTTGGAAACATTGATTGAAGTTGCTGCACAACAATATTATGGTGATGATAAACGATGGAACTTCATTGCTGTTACGGAGGCTTTGAAGGTACTCTTTAGATTAGCTCTGTTCAAGAATTGTGGGTACAAGATCCTTCTTGATGGAGGAGAAACCATAAATAACGAAAGACATCTGAAAACTTCAACTTCTCAGCACAGACCTAATGCTTTCACAAAGCATGGTGGGCATAATGCATCTGGTTATTCAGGATATCTTAATGGACATGACCAATGGAATCTAGAAGGGAGGGCATTATCTGCATTAAGCAGGTTCGGGGAAAAGGCTCGGATGATTTCACCACCAGCATGGTCGTATGGGGTTCAGCACCAGCATGGAATGTTCAATCCTTCAGGTGCCTATATCGATCCCAAGTTCCTAGAGTTTTGTGGGGGGAATGTCTACTGA

Protein sequence

MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIETAPTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRLALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLEGRALSALSRFGEKARMISPPAWSYGVQHQHGMFNPSGAYIDPKFLEFCGGNVY

Homology

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BLAST of Carg10226 vs. NCBI nr
Match: XP_022959429.1 (peroxisome biogenesis protein 16-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 443.7 bits (1140), Expect = 3.8e-121
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET
Sbjct: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
           APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL
Sbjct: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE
Sbjct: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNPS 217
           GRALSALSRFGEKARMIS PAWSYGVQHQHGMFNPS
Sbjct: 181 GRALSALSRFGEKARMISAPAWSYGVQHQHGMFNPS 216

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BLAST of Carg10226 vs. NCBI nr
Match: XP_023006235.1 (peroxisome biogenesis protein 16-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 441.4 bits (1134), Expect = 1.9e-120
Identity = 213/216 (98.61%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAYKKW RDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET
Sbjct: 1   MEAYKKWARDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
           APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL
Sbjct: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHD WNLE
Sbjct: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDHWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNPS 217
           GRALSALSRFGE ARMISPPAWSYGVQHQHGMFNPS
Sbjct: 181 GRALSALSRFGENARMISPPAWSYGVQHQHGMFNPS 216

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BLAST of Carg10226 vs. NCBI nr
Match: XP_023547844.1 (peroxisome biogenesis protein 16-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.0 bits (1125), Expect = 2.1e-119
Identity = 212/216 (98.15%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET
Sbjct: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
           APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL
Sbjct: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGY GYLNG D WNLE
Sbjct: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYPGYLNGQDHWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNPS 217
           GRALSALSRFGE ARMISPPAWSYGVQHQHGMFNPS
Sbjct: 181 GRALSALSRFGENARMISPPAWSYGVQHQHGMFNPS 216

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BLAST of Carg10226 vs. NCBI nr
Match: XP_008460147.1 (PREDICTED: peroxisome biogenesis protein 16 isoform X1 [Cucumis melo])

HSP 1 Score: 405.2 bits (1040), Expect = 1.5e-109
Identity = 193/215 (89.77%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAY+KWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGI+TAVNEHIIET
Sbjct: 1   MEAYRKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIITAVNEHIIET 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
           APTQMHVNAT+PSSFPYSLCI+ALKNLETLIEVAAQQYYGDDKRWNFIAVTEA+KVLFRL
Sbjct: 61  APTQMHVNATMPSSFPYSLCIAALKNLETLIEVAAQQYYGDDKRWNFIAVTEAMKVLFRL 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           ALFKN GYKILL+GGET NNERHL+TSTSQH+ NAFTKHGGH+ASG+SGYLNGH+ WNLE
Sbjct: 121 ALFKNSGYKILLEGGETTNNERHLETSTSQHKANAFTKHGGHHASGFSGYLNGHNPWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNP 216
           GRALSALSRFGE A+MISPPAWS+ VQHQH + NP
Sbjct: 181 GRALSALSRFGENAQMISPPAWSHRVQHQHAILNP 215

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BLAST of Carg10226 vs. NCBI nr
Match: XP_004144990.1 (PREDICTED: peroxisome biogenesis protein 16 isoform X1 [Cucumis sativus] >KGN46215.1 hypothetical protein Csa_6G075160 [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 2.8e-108
Identity = 193/215 (89.77%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAY+KWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGI+TAVNEHIIET
Sbjct: 1   MEAYRKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIITAVNEHIIET 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
           APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEA+KVLFRL
Sbjct: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEAMKVLFRL 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           ALFKN GYKILL+GGET N+ERHL+TSTS H+ NAFTKHGGH+ASG+SG LNGH  WNLE
Sbjct: 121 ALFKNSGYKILLEGGETTNSERHLETSTSHHKANAFTKHGGHHASGFSGDLNGHSPWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNP 216
           GRALSALSRFGE ARM SPPAWSY VQHQH + NP
Sbjct: 181 GRALSALSRFGENARMTSPPAWSYRVQHQHAILNP 215

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BLAST of Carg10226 vs. TAIR10
Match: AT2G45690.1 (shrunken seed protein (SSE1))

HSP 1 Score: 221.1 bits (562), Expect = 7.2e-58
Identity = 120/220 (54.55%), Postives = 153/220 (69.55%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAYK+WV  NR+Y+ SF S ANGLTWLLPE+FS SEIGPEAV+A +GI + +NEHIIE 
Sbjct: 1   MEAYKQWVWRNREYVQSFGSFANGLTWLLPEKFSASEIGPEAVTAFLGIFSTINEHIIEN 60

Query: 61  APT-QMHVNAT-VPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLF 120
           APT + HV ++    S  Y L I+ LK+LET++EVAA+ +YG DK+WN+I +TEA+K + 
Sbjct: 61  APTPRGHVGSSGNDPSLSYPLLIAILKDLETVVEVAAEHFYG-DKKWNYIILTEAMKAVI 120

Query: 121 RLALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYS-GYLNGHDQW 180
           RLALF+N GYK+LL GGET N E+    S SQ+R      + G N   +  G  N H+ W
Sbjct: 121 RLALFRNSGYKMLLQGGETPNEEKDSNQSESQNRAG----NSGRNLGPHGLGNQNHHNPW 180

Query: 181 NLEGRALSALSRFGEKARMI--SPPAWSYGVQHQHGMFNP 216
           NLEGRA+SALS FG+ AR    S P WS  +QHQ  +  P
Sbjct: 181 NLEGRAMSALSSFGQNARTTTSSTPGWSRRIQHQQAVIEP 215

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BLAST of Carg10226 vs. Swiss-Prot
Match: sp|Q8S8S1|PEX16_ARATH (Peroxisome biogenesis protein 16 OS=Arabidopsis thaliana OX=3702 GN=PEX16 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.3e-56
Identity = 120/220 (54.55%), Postives = 153/220 (69.55%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAYK+WV  NR+Y+ SF S ANGLTWLLPE+FS SEIGPEAV+A +GI + +NEHIIE 
Sbjct: 1   MEAYKQWVWRNREYVQSFGSFANGLTWLLPEKFSASEIGPEAVTAFLGIFSTINEHIIEN 60

Query: 61  APT-QMHVNAT-VPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLF 120
           APT + HV ++    S  Y L I+ LK+LET++EVAA+ +YG DK+WN+I +TEA+K + 
Sbjct: 61  APTPRGHVGSSGNDPSLSYPLLIAILKDLETVVEVAAEHFYG-DKKWNYIILTEAMKAVI 120

Query: 121 RLALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYS-GYLNGHDQW 180
           RLALF+N GYK+LL GGET N E+    S SQ+R      + G N   +  G  N H+ W
Sbjct: 121 RLALFRNSGYKMLLQGGETPNEEKDSNQSESQNRAG----NSGRNLGPHGLGNQNHHNPW 180

Query: 181 NLEGRALSALSRFGEKARMI--SPPAWSYGVQHQHGMFNP 216
           NLEGRA+SALS FG+ AR    S P WS  +QHQ  +  P
Sbjct: 181 NLEGRAMSALSSFGQNARTTTSSTPGWSRRIQHQQAVIEP 215

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BLAST of Carg10226 vs. Swiss-Prot
Match: sp|Q4QRH7|PEX16_DANRE (Peroxisomal membrane protein PEX16 OS=Danio rerio OX=7955 GN=pex16 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 35/124 (28.23%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 2   EAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIETA 61
           E Y+++VR +       ES    L++L+  RFSDS    E V +A  ++  +N+ I+   
Sbjct: 9   ERYQEYVRTSPAAASHLESTVRALSYLIAGRFSDSHEISELVYSASNLLVLLNDGIL--- 68

Query: 62  PTQMHVNATVPSSFPYS---LCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLF 121
             + +++ T+P S         +S L+ +E  +E+AA + +GD  RW  I + +  K + 
Sbjct: 69  --RKNLSRTLPMSISQQKLLTWLSVLEYVEVFVEMAAAKMWGDAGRWLVIVLIQIAKAVL 127

Query: 122 RLAL 123
           R  L
Sbjct: 129 RCLL 127

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BLAST of Carg10226 vs. Swiss-Prot
Match: sp|Q91XC9|PEX16_MOUSE (Peroxisomal membrane protein PEX16 OS=Mus musculus OX=10090 GN=Pex16 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 3.4e-04
Identity = 32/122 (26.23%), Postives = 60/122 (49.18%), Query Frame = 0


Query: 4   YKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIETAPT 63
           Y+++V  +       E+   GL++LL  RFSDS    E V +A  ++  +N+ I+     
Sbjct: 11  YQEYVTRHPAATAQLETAVRGLSYLLAGRFSDSHELSELVYSASNLLVLLNDGIL----- 70

Query: 64  QMHVNATVPSSFPYS---LCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 123
           +  +   +P S         +S L+ +E  +E+ A + +G+  RW  IA+ +  K + R+
Sbjct: 71  RKELRKKLPVSLSQQKLLTWLSVLECVEVFMEMGAAKVWGEVGRWLVIALIQLAKAVLRM 127

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BLAST of Carg10226 vs. TrEMBL
Match: tr|A0A1S3CCB9|A0A1S3CCB9_CUCME (Peroxisomal membrane protein PEX16 OS=Cucumis melo OX=3656 GN=LOC103499046 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 9.8e-110
Identity = 193/215 (89.77%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAY+KWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGI+TAVNEHIIET
Sbjct: 1   MEAYRKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIITAVNEHIIET 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
           APTQMHVNAT+PSSFPYSLCI+ALKNLETLIEVAAQQYYGDDKRWNFIAVTEA+KVLFRL
Sbjct: 61  APTQMHVNATMPSSFPYSLCIAALKNLETLIEVAAQQYYGDDKRWNFIAVTEAMKVLFRL 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           ALFKN GYKILL+GGET NNERHL+TSTSQH+ NAFTKHGGH+ASG+SGYLNGH+ WNLE
Sbjct: 121 ALFKNSGYKILLEGGETTNNERHLETSTSQHKANAFTKHGGHHASGFSGYLNGHNPWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNP 216
           GRALSALSRFGE A+MISPPAWS+ VQHQH + NP
Sbjct: 181 GRALSALSRFGENAQMISPPAWSHRVQHQHAILNP 215

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BLAST of Carg10226 vs. TrEMBL
Match: tr|A0A0A0K8X7|A0A0A0K8X7_CUCSA (Peroxisomal membrane protein PEX16 OS=Cucumis sativus OX=3659 GN=Csa_6G075160 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.9e-108
Identity = 193/215 (89.77%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAY+KWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGI+TAVNEHIIET
Sbjct: 1   MEAYRKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIITAVNEHIIET 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
           APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEA+KVLFRL
Sbjct: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEAMKVLFRL 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           ALFKN GYKILL+GGET N+ERHL+TSTS H+ NAFTKHGGH+ASG+SG LNGH  WNLE
Sbjct: 121 ALFKNSGYKILLEGGETTNSERHLETSTSHHKANAFTKHGGHHASGFSGDLNGHSPWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNP 216
           GRALSALSRFGE ARM SPPAWSY VQHQH + NP
Sbjct: 181 GRALSALSRFGENARMTSPPAWSYRVQHQHAILNP 215

[Close]

BLAST of Carg10226 vs. TrEMBL
Match: tr|B9IC88|B9IC88_POPTR (Peroxisomal membrane protein PEX16 OS=Populus trichocarpa OX=3694 GN=POPTR_014G078300v3 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.1e-80
Identity = 152/221 (68.78%), Postives = 173/221 (78.28%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAYKKWVR N+DY+HS ESLANGLTWLLPERFS SEIGPEAV+A +GIVTA+NEHII+T
Sbjct: 1   MEAYKKWVRRNKDYVHSLESLANGLTWLLPERFSASEIGPEAVTAILGIVTAINEHIIDT 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
            PTQM  +   P+SFPYSLCISA+K+LETL+EVAAQ YYGDDK+WNFIAVTEA KVL RL
Sbjct: 61  TPTQMFADPVKPNSFPYSLCISAIKDLETLVEVAAQHYYGDDKKWNFIAVTEATKVLVRL 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           ALF+N GYK+LL GGET N E+HL  S+SQH    F KHG H+ S      NG + WNLE
Sbjct: 121 ALFRNSGYKMLLHGGETPNIEKHLGFSSSQHNGGGFQKHGAHHGS------NGQNPWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNPSGAYID 222
           GRALSALSRFGE ARM S P W  GVQH+  +  P    I+
Sbjct: 181 GRALSALSRFGENARMGSDPVWLRGVQHKQAIMEPPPQMIE 215

[Close]

BLAST of Carg10226 vs. TrEMBL
Match: tr|A0A067KFB8|A0A067KFB8_JATCU (Peroxisomal membrane protein PEX16 OS=Jatropha curcas OX=180498 GN=JCGZ_15253 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.4e-79
Identity = 147/221 (66.52%), Postives = 174/221 (78.73%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAYK+WVR N++Y+HS ESLANGLTWLLPERFS SEIGPEAV+A +G+VTA+NEHII+T
Sbjct: 1   MEAYKRWVRRNKEYVHSLESLANGLTWLLPERFSASEIGPEAVTAILGVVTAINEHIIDT 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
            PTQM   +  P SFPYSLCISA+K+LETL+EVAAQ YYG+DK+WNFIAVTEA+KVL RL
Sbjct: 61  TPTQMQSGSVEPYSFPYSLCISAIKDLETLVEVAAQHYYGEDKKWNFIAVTEAIKVLVRL 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           A F+N GYK+LL GGET NNE+HL  S SQH    F+K G H+  GY   +NG + WNLE
Sbjct: 121 ASFRNSGYKMLLHGGETPNNEKHLNFS-SQHATGGFSKPGSHHGPGYYRDVNGQNPWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNPSGAYID 222
           GRALSALSRFGE ARM+S P W   VQHQ  +  P    ++
Sbjct: 181 GRALSALSRFGENARMVSDPVWLCRVQHQQAIMEPPSPMVE 220

[Close]

BLAST of Carg10226 vs. TrEMBL
Match: tr|M5XMM5|M5XMM5_PRUPE (Peroxisomal membrane protein PEX16 OS=Prunus persica OX=3760 GN=PRUPE_2G152800 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.7e-77
Identity = 145/215 (67.44%), Postives = 168/215 (78.14%), Query Frame = 0


Query: 1   MEAYKKWVRDNRDYLHSFESLANGLTWLLPERFSDSEIGPEAVSAAVGIVTAVNEHIIET 60
           MEAYKKWVR+N+DY+HS ESLANG TWLLPERFS+SEIGPEAV+A  G++TA+NEHIIET
Sbjct: 1   MEAYKKWVRENKDYVHSLESLANGFTWLLPERFSESEIGPEAVTALFGVITAINEHIIET 60

Query: 61  APTQMHVNATVPSSFPYSLCISALKNLETLIEVAAQQYYGDDKRWNFIAVTEALKVLFRL 120
           AP  M+V +    SFPY+LCISALK+LETL+EV AQQY+GD+K+WNFIA  EA+KVL R 
Sbjct: 61  APPPMNVGSAECYSFPYALCISALKDLETLVEVVAQQYFGDEKKWNFIAAMEAIKVLVRF 120

Query: 121 ALFKNCGYKILLDGGETINNERHLKTSTSQHRPNAFTKHGGHNASGYSGYLNGHDQWNLE 180
           ALF+N GYK+LL GGET N+E+HL  S  Q   N FTK GG    GY    NG D WNLE
Sbjct: 121 ALFRNSGYKMLLHGGETPNDEKHLAASIPQR--NGFTKPGGQLGPGYLRNNNGQDAWNLE 180

Query: 181 GRALSALSRFGEKARMISPPAWSYGVQHQHGMFNP 216
           GRALSALSRFGE ARM+S P W   VQHQH +  P
Sbjct: 181 GRALSALSRFGENARMVSEPVWLRRVQHQHAIMEP 213

The following BLAST results are available for this feature:

BLAST of Carg10226 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959429.1	3.8e-121	99.54	peroxisome biogenesis protein 16-like isoform X1 [Cucurbita moschata]	[more]
XP_023006235.1	1.9e-120	98.61	peroxisome biogenesis protein 16-like isoform X1 [Cucurbita maxima]	[more]
XP_023547844.1	2.1e-119	98.15	peroxisome biogenesis protein 16-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_008460147.1	1.5e-109	89.77	PREDICTED: peroxisome biogenesis protein 16 isoform X1 [Cucumis melo]	[more]
XP_004144990.1	2.8e-108	89.77	PREDICTED: peroxisome biogenesis protein 16 isoform X1 [Cucumis sativus] >KGN462...	[more]

BLAST of Carg10226 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45690.1	7.2e-58	54.55	shrunken seed protein (SSE1)	[more]

BLAST of Carg10226 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8S8S1\|PEX16_ARATH	1.3e-56	54.55	Peroxisome biogenesis protein 16 OS=Arabidopsis thaliana OX=3702 GN=PEX16 PE=1 S...	[more]
sp\|Q4QRH7\|PEX16_DANRE	1.6e-06	28.23	Peroxisomal membrane protein PEX16 OS=Danio rerio OX=7955 GN=pex16 PE=2 SV=1	[more]
sp\|Q91XC9\|PEX16_MOUSE	3.4e-04	26.23	Peroxisomal membrane protein PEX16 OS=Mus musculus OX=10090 GN=Pex16 PE=1 SV=2	[more]

BLAST of Carg10226 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CCB9\|A0A1S3CCB9_CUCME	9.8e-110	89.77	Peroxisomal membrane protein PEX16 OS=Cucumis melo OX=3656 GN=LOC103499046 PE=3 ...	[more]
tr\|A0A0A0K8X7\|A0A0A0K8X7_CUCSA	1.9e-108	89.77	Peroxisomal membrane protein PEX16 OS=Cucumis sativus OX=3659 GN=Csa_6G075160 PE...	[more]
tr\|B9IC88\|B9IC88_POPTR	2.1e-80	68.78	Peroxisomal membrane protein PEX16 OS=Populus trichocarpa OX=3694 GN=POPTR_014G0...	[more]
tr\|A0A067KFB8\|A0A067KFB8_JATCU	1.4e-79	66.52	Peroxisomal membrane protein PEX16 OS=Jatropha curcas OX=180498 GN=JCGZ_15253 PE...	[more]
tr\|M5XMM5\|M5XMM5_PRUPE	1.7e-77	67.44	Peroxisomal membrane protein PEX16 OS=Prunus persica OX=3760 GN=PRUPE_2G152800 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013919	Pex16

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10226-RA	Carg10226-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013919	Peroxisome membrane protein, Pex16	PFAM	PF08610	Pex16	coord: 2..192 e-value: 1.9E-36 score: 125.8
IPR013919	Peroxisome membrane protein, Pex16	PANTHER	PTHR13299	UNCHARACTERIZED	coord: 1..192

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10226	Cla006938	Watermelon (97103) v1	carwmB0220
Carg10226	Csa6G075160	Cucumber (Chinese Long) v2	carcuB0258
Carg10226	MELO3C022521	Melon (DHL92) v3.5.1	carmeB0232
Carg10226	ClCG06G000170	Watermelon (Charleston Gray)	carwcgB0222
Carg10226	CSPI06G05610	Wild cucumber (PI 183967)	carcpiB0262
Carg10226	Cucsa.363030	Cucumber (Gy14) v1	carcgyB0272
Carg10226	CmaCh08G009370	Cucurbita maxima (Rimu)	carcmaB0320
Carg10226	CmaCh17G000050	Cucurbita maxima (Rimu)	carcmaB0314
Carg10226	CmoCh08G009060	Cucurbita moschata (Rifu)	carcmoB0325
Carg10226	CmoCh17G000070	Cucurbita moschata (Rifu)	carcmoB0320
Carg10226	Lsi09G019240	Bottle gourd (USVL1VR-Ls)	carlsiB203
Carg10226	Cp4.1LG12g00120	Cucurbita pepo (Zucchini)	carcpeB0322
Carg10226	Cp4.1LG17g02420	Cucurbita pepo (Zucchini)	carcpeB0326
Carg10226	CsGy6G005560	Cucumber (Gy14) v2	carcgybB0248
Carg10226	MELO3C022521.2	Melon (DHL92) v3.6.1	carmedB0239
Carg10226	CsaV3_6G005940	Cucumber (Chinese Long) v3	carcucB0262
Carg10226	Cla97C06G109430	Watermelon (97103) v2	carwmbB0231
Carg10226	BhiUN123G60	Wax gourd	carwgoB0288

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg10226	Carg11102	Silver-seed gourd	carcarB270

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10226	Cucumber (Gy14) v2	carcgybB0247
Carg10226	Bottle gourd (USVL1VR-Ls)	carlsiB205
Carg10226	Watermelon (97103) v2	carwmbB0229