Carg10198 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10198
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	26S proteasome non-ATPase regulatory subunit 3 like
Location	Cucurbita_argyrosperma_scaffold_039 : 1053466 .. 1057227 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGATTTTATATTTATATAAATAGAACTTTTTTTTTGACAAAATTCAAAAATACCGACTAATAGCCAAAGCGACGTCGTTTTGTAACTTTGATTCGCGCATTGTTTGCTTCTTTTCTCTTCTAACATTTCACTGAGGGTTTGTCTTGCTGAAGAAAATTTCAAGAAACCCTTGCTTCTTCATCTCTGATCCATTTACACAGCGAAGATCTTGTTCTTTCTCTCGATTTCAGGTCAGATCCACTTGAACTATCGCTTTGTTGCTTCCTTTTTGTTTCGCCACCGAAATTGTTGTTGATTTACCTATGTAGTTTGTGAGATCTTCATACAGAACTTGCGAAGATGACCCAAGACGCCGAAATAAAAGAGCTTCCTGCTCCATTGCCGTCTTCGTCCTCTTCAACTTCCCCCTCAACTCTTCAGCGTAAGAAAATTTTATCTATATTTTTTAATCTTGCTTTTGCGCTTTGTTTATTTGAATGCGGCTCTCTACTGGGGATTAGGGATTGGGATATCTTTCAATTTTTTTTTTATGTTTGTTCTTTAGGGCTTCATTCAATCCTTAGAGTGCCTGGTTTTTAAATTTCTTAGTGATTTCTTCTTTCAATCAGTTTTGAAAGAGATTGTATCGCTCATTGAGACTGGTGCCTATGCCCGGGAGGTTCGGCGCGTTGTTCGTGCCATTCGTCTGACAATGGCCTTGAGGCGGAAGTTGAAGGCTTCTGTCCTTTCTCAATTTCTGAATCTTGTTCTCCCCCCAGGGTCAGAGGTGCACACCAGGTTATCGTCATTTCTCCCAAAGGTACTTAGAAATTATTAGGAAATTTTGATTTTCATTAGCATAATGCAATTTGAGGTCGTTAGCTAGTTTTTTTTTTTTTTTTTTTTTTGGTTTCTGAGTGGGCTTGATCAATTTGAGTTATGGTTCATGGTAGTAGTGTTCTGAGCCTTCAAATTATTGCATAATTGCTTAGGAGGACGACTTTGAAATGGACGTTGACACGGCAACACAAGCTCCTGTCAAGCACCCCCTGCCCGAGATAGAGATATTCTGCTACTTGATTGTGCTAATATTTTTTATTGATCAGAAGAAATATGACGATGTGAGGTTTTATGCAAAGGAATCAGTGTTTTTCATATTTTTCCTCAACTCTTGGCTAGTCATCCTGAGCACTAACTGAACATTTTCAGGCTAAGGCTTGCGCCTCAGCAAGCATCACACGGCTCAAGAGCCTAAATAGGAGAACAGTCGATGTTTTAGCATCCAGGCTCTACTTCTATTACTCCCTCAGCTACGAACTCACTGGCGAACTTGCTGAAATAAGGGGGTGAGTTTTCATCTAAAACTGTAATAGGGTTATGGTAGTTAAGTTTACGCCTTTGTATGGGTCTAGTGGTTTTAATTCGGAGTATATAAATGAGGAGGAATATTTGATTGAATATATTAATCTTTTGACGTGGAAAACTTTGATTGGCAGTAACCTCCTAGCACTGCATCGCATTGCAACCTTGCGCCATGATGAATTGGGTCAGGTAGTCCTTCAAACCTTTTCGGTGCATACCACCCGTGAGTTCATTATGGTACCTTACGTATGGACAACAATGTCATGTAGGAAACCATCCTTAACCTTCTACTTCGTAACTACCTCCACTACAACCTCTATGATCAAGCAGAGAAGTTGAGGTCCAAGGCACCCCGATTTGAAGCTCACTCAAATCAGCAGGCGAGTTCTAAGTTCCTTTTTTTTTTCTTTTTCTTTTCTTTATTCTAAGGTAATGAGTATATGTGGGTTGTTAAAAGATTTTTAATCAGTACTTAGGTAGCATTGTTTTCCGTTGAAATGCTCCTAGCAGATGTAACTTGGCCATCATTTAAATAGTTTAGATCTTGTTTTGTATGCAATTTAAATTATGTTTTATGTTTTTGGTATCCATATTTTGGATTTGAAATTTTAAACTGCATAGTCAAAGAAAAGTAGAGAAAAGAAGACAAAGCCTTTAATATTTAACTTTATTAAGTCATTTCATTTTTGTTAAATAAAATAGGTAGAACATAATACTATTATAAATCATATGATATTGTAAGATAATAATTATACAACATTTCTAACATAAAACATGTACGTACATTATTTAACAATAGTTGATATTCAACCTAATAGTTATTTGGTGACTACAACTATTTTTTTCTTTATTATTATTTAAAAAACTATATTTATAGTATATAAATATATTATCAAACTCATTTTGAACAACTGATTAAATTGGGGTCCAGTTTCAAATCTTCTACTAAACATATATTTGAAAACACTGAAAATGTAAAAGATAACTTTGTTCTTCGATGAATCCCCTATTTTCAAGTTAATTTTTTCAGATAACAAACTAAATGCACCCTTAGGTAACTCGATGTTGAAGTTGCTAAAGTTGACATGATTAGCCATATGCTCATGAAGTTTTAGAATATAGCAGTTGTGTAGTATGTGAATTCATAAGAATCTAAGCATCATATTTGAAATTATAGGGATGTTTTTCTGAGGTAGAATTTCTCGCCTTTCTTAGTATTAGAACTTCAGTTATAAGCTACAATGCTAGATATCTCATAAAGATTGGTTATTACAGTTCTGTAGGTACCTATTCTACCTTGGCAAGATCAGGACCATTCAGCTGGAGTATACAGATGCAAAGGAGTCTCTTCTACAAGCTGCTCGGAAAGCACCCATTGCAGCTCTTGGATTTCGAGTGCAATGCAACAAATGGGCAATCATTGTTCGGTTGCTGCTAGGAGAAATCCCTGAGAGGACCGTTTTCATGCAGAAAGGCATGGAGACAGCGCTGAGGCCATACTTTGAACTTACAAATGTAATTTTTCGTTACTTTCCAGTTATTTTCTTCCATTAAGTTTAAAGTTTGTATGGAATCGTTTCTTTTTTCTCTAACAAAAAACGAAATATTTGTTTCTTAAAAAGGTGAGGATGAGGGAAGCGGAAATGTTGTGGTAATGTAGGGAATCTTGTTAGTGGGAACCATATGTTAGTTGCTGATAGTACAGGTAATTTCATGAATGGGTAGATAAGATACAGGTGGAGGGATAACATAGGGGGGATATCTTTGGCTTAAGTGTTAATTTTGGTTTCGAGTTTTCCCCAGTTCATGATCGAGTCAAGATAATGGCAGTGTGCTTCCAGTTTATTATACTTTTTCTTAATGTATCTTTGGCTTAAGTGTGCTACCAATGTTTTTTTTTTCAGGCTGTGAGAATTGGTGACTTGGAGCTTTTCAGAACTGTTGCTGAGAAGTTCTCCAGTACTTTCAGCTCAGATCGAACCAACAACTTGATCGTGAGGCTGCGACATAATGTCATTAGGACTGGGCTTCGCAACATTAGCATTTCTTATTCGCGTATTTCTCTGGTTGATGTTGCTAAAAAGCTTAGGTTGGACTCCCCAAATCCTGTTGCTGATGCTGAGAGTATTGTCTCGAAGGCAATCCGAGATGGAGCAATCGATGCAACTGTCGACCATGCGAATGGATGGATGGTATCGAAGGAGACTGGTGATATCTACTCAACCAATGAACCTCAGATGGCTTTCAACTCGAGAATTGCATTTTGCCTGAATATGCATAATGAAGCAGTTCGTGCCCTTCGGTTTCCACCAAATTCACACAAAGAAAAAGAAAGCGCTGAGAAAAGGAGAGAGAGACAACAGCAGGAGCAAGAACTTGCAAAGCACATAGCTGAAGAAGATGACGACGACTTTTAG

mRNA sequence

AAAAAGATTTTATATTTATATAAATAGAACTTTTTTTTTGACAAAATTCAAAAATACCGACTAATAGCCAAAGCGACGTCGTTTTGTAACTTTGATTCGCGCATTGTTTGCTTCTTTTCTCTTCTAACATTTCACTGAGGGTTTGTCTTGCTGAAGAAAATTTCAAGAAACCCTTGCTTCTTCATCTCTGATCCATTTACACAGCGAAGATCTTGTTCTTTCTCTCGATTTCAGAACTTGCGAAGATGACCCAAGACGCCGAAATAAAAGAGCTTCCTGCTCCATTGCCGTCTTCGTCCTCTTCAACTTCCCCCTCAACTCTTCAGCTTTTGAAAGAGATTGTATCGCTCATTGAGACTGGTGCCTATGCCCGGGAGGTTCGGCGCGTTGTTCGTGCCATTCGTCTGACAATGGCCTTGAGGCGGAAGTTGAAGGCTTCTGTCCTTTCTCAATTTCTGAATCTTGTTCTCCCCCCAGGGTCAGAGGTGCACACCAGGTTATCGTCATTTCTCCCAAAGGAGGACGACTTTGAAATGGACGTTGACACGGCAACACAAGCTCCTGTCAAGCACCCCCTGCCCGAGATAGAGATATTCTGCTACTTGATTGTGCTAATATTTTTTATTGATCAGAAGAAATATGACGATGCTAAGGCTTGCGCCTCAGCAAGCATCACACGGCTCAAGAGCCTAAATAGGAGAACAGTCGATGTTTTAGCATCCAGGCTCTACTTCTATTACTCCCTCAGCTACGAACTCACTGGCGAACTTGCTGAAATAAGGGGTAACCTCCTAGCACTGCATCGCATTGCAACCTTGCGCCATGATGAATTGGGTCAGGAAACCATCCTTAACCTTCTACTTCGTAACTACCTCCACTACAACCTCTATGATCAAGCAGAGAAGTTGAGGTCCAAGGCACCCCGATTTGAAGCTCACTCAAATCAGCAGGCGAGTTCTAAGTACCTATTCTACCTTGGCAAGATCAGGACCATTCAGCTGGAGTATACAGATGCAAAGGAGTCTCTTCTACAAGCTGCTCGGAAAGCACCCATTGCAGCTCTTGGATTTCGAGTGCAATGCAACAAATGGGCAATCATTGTTCGGTTGCTGCTAGGAGAAATCCCTGAGAGGACCGTTTTCATGCAGAAAGGCATGGAGACAGCGCTGAGGCCATACTTTGAACTTACAAATGCTGTGAGAATTGGTGACTTGGAGCTTTTCAGAACTGTTGCTGAGAAGTTCTCCAGTACTTTCAGCTCAGATCGAACCAACAACTTGATCGTGAGGCTGCGACATAATGTCATTAGGACTGGGCTTCGCAACATTAGCATTTCTTATTCGCGTATTTCTCTGGTTGATGTTGCTAAAAAGCTTAGGTTGGACTCCCCAAATCCTGTTGCTGATGCTGAGAGTATTGTCTCGAAGGCAATCCGAGATGGAGCAATCGATGCAACTGTCGACCATGCGAATGGATGGATGGTATCGAAGGAGACTGGTGATATCTACTCAACCAATGAACCTCAGATGGCTTTCAACTCGAGAATTGCATTTTGCCTGAATATGCATAATGAAGCAGTTCGTGCCCTTCGGTTTCCACCAAATTCACACAAAGAAAAAGAAAGCGCTGAGAAAAGGAGAGAGAGACAACAGCAGGAGCAAGAACTTGCAAAGCACATAGCTGAAGAAGATGACGACGACTTTTAG

Coding sequence (CDS)

ATGACCCAAGACGCCGAAATAAAAGAGCTTCCTGCTCCATTGCCGTCTTCGTCCTCTTCAACTTCCCCCTCAACTCTTCAGCTTTTGAAAGAGATTGTATCGCTCATTGAGACTGGTGCCTATGCCCGGGAGGTTCGGCGCGTTGTTCGTGCCATTCGTCTGACAATGGCCTTGAGGCGGAAGTTGAAGGCTTCTGTCCTTTCTCAATTTCTGAATCTTGTTCTCCCCCCAGGGTCAGAGGTGCACACCAGGTTATCGTCATTTCTCCCAAAGGAGGACGACTTTGAAATGGACGTTGACACGGCAACACAAGCTCCTGTCAAGCACCCCCTGCCCGAGATAGAGATATTCTGCTACTTGATTGTGCTAATATTTTTTATTGATCAGAAGAAATATGACGATGCTAAGGCTTGCGCCTCAGCAAGCATCACACGGCTCAAGAGCCTAAATAGGAGAACAGTCGATGTTTTAGCATCCAGGCTCTACTTCTATTACTCCCTCAGCTACGAACTCACTGGCGAACTTGCTGAAATAAGGGGTAACCTCCTAGCACTGCATCGCATTGCAACCTTGCGCCATGATGAATTGGGTCAGGAAACCATCCTTAACCTTCTACTTCGTAACTACCTCCACTACAACCTCTATGATCAAGCAGAGAAGTTGAGGTCCAAGGCACCCCGATTTGAAGCTCACTCAAATCAGCAGGCGAGTTCTAAGTACCTATTCTACCTTGGCAAGATCAGGACCATTCAGCTGGAGTATACAGATGCAAAGGAGTCTCTTCTACAAGCTGCTCGGAAAGCACCCATTGCAGCTCTTGGATTTCGAGTGCAATGCAACAAATGGGCAATCATTGTTCGGTTGCTGCTAGGAGAAATCCCTGAGAGGACCGTTTTCATGCAGAAAGGCATGGAGACAGCGCTGAGGCCATACTTTGAACTTACAAATGCTGTGAGAATTGGTGACTTGGAGCTTTTCAGAACTGTTGCTGAGAAGTTCTCCAGTACTTTCAGCTCAGATCGAACCAACAACTTGATCGTGAGGCTGCGACATAATGTCATTAGGACTGGGCTTCGCAACATTAGCATTTCTTATTCGCGTATTTCTCTGGTTGATGTTGCTAAAAAGCTTAGGTTGGACTCCCCAAATCCTGTTGCTGATGCTGAGAGTATTGTCTCGAAGGCAATCCGAGATGGAGCAATCGATGCAACTGTCGACCATGCGAATGGATGGATGGTATCGAAGGAGACTGGTGATATCTACTCAACCAATGAACCTCAGATGGCTTTCAACTCGAGAATTGCATTTTGCCTGAATATGCATAATGAAGCAGTTCGTGCCCTTCGGTTTCCACCAAATTCACACAAAGAAAAAGAAAGCGCTGAGAAAAGGAGAGAGAGACAACAGCAGGAGCAAGAACTTGCAAAGCACATAGCTGAAGAAGATGACGACGACTTTTAG

Protein sequence

MTQDAEIKELPAPLPSSSSSTSPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRRKLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASSKYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQEQELAKHIAEEDDDDF

Homology

[Close]

BLAST of Carg10198 vs. NCBI nr
Match: XP_023549020.1 (probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita pepo subsp. pepo] >XP_023549021.1 probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 844.3 bits (2180), Expect = 2.0e-241
Identity = 446/456 (97.81%), Postives = 449/456 (98.46%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQDAE+KELPAPLP XXXXXXPSTLQLLKEIVSLIETGAYAREVRR+VRAIRLTMALRR
Sbjct: 1   MTQDAEMKELPAPLPXXXXXXXPSTLQLLKEIVSLIETGAYAREVRRIVRAIRLTMALRR 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYL 120
           KLK SVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYL
Sbjct: 61  KLKPSVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYL 120

Query: 121 IVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRG 180
           IVLIFFIDQKKYDDAKACASASI RLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRG
Sbjct: 121 IVLIFFIDQKKYDDAKACASASIARLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRG 180

Query: 181 NLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASSKY 240
           NLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ   +Y
Sbjct: 181 NLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-FCRY 240

Query: 241 LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300
           LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM
Sbjct: 241 LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300

Query: 301 QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360
           QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN
Sbjct: 301 QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360

Query: 361 ISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420
           ISISYSRISL DVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI
Sbjct: 361 ISISYSRISLADVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420

Query: 421 YSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           YSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 YSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 455

[Close]

BLAST of Carg10198 vs. NCBI nr
Match: XP_022959338.1 (probable 26S proteasome non-ATPase regulatory subunit 3 isoform X1 [Cucurbita moschata] >XP_022959339.1 probable 26S proteasome non-ATPase regulatory subunit 3 isoform X1 [Cucurbita moschata] >XP_022959340.1 probable 26S proteasome non-ATPase regulatory subunit 3 isoform X2 [Cucurbita moschata] >XP_022959341.1 probable 26S proteasome non-ATPase regulatory subunit 3 isoform X2 [Cucurbita moschata])

HSP 1 Score: 831.2 bits (2146), Expect = 1.8e-237
Identity = 440/477 (92.24%), Postives = 443/477 (92.87%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTL---------------------QLLKEIVSLIETG 60
           MTQDAE+KELPAPLPS      P                         +LKEIVSLIETG
Sbjct: 1   MTQDAEMKELPAPLPSSSSSTSPQLFSGFIQSLECLVFKFLSDFFFQSVLKEIVSLIETG 60

Query: 61  AYAREVRRVVRAIRLTMALRRKLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDV 120
           AYAREVRRVVRAIRLTMALRRKLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDV
Sbjct: 61  AYAREVRRVVRAIRLTMALRRKLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDV 120

Query: 121 DTATQAPVKHPLPEIEIFCYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLAS 180
           DTATQAPVKHPLPEIEIFCYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLAS
Sbjct: 121 DTATQAPVKHPLPEIEIFCYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLAS 180

Query: 181 RLYFYYSLSYELTGELAEIRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAE 240
           RLYFYYSLSYELTGELAEIRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAE
Sbjct: 181 RLYFYYSLSYELTGELAEIRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAE 240

Query: 241 KLRSKAPRFEAHSNQQASSKYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQC 300
           KLRSKAPRFEAHSNQQ   +YLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQC
Sbjct: 241 KLRSKAPRFEAHSNQQ-FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQC 300

Query: 301 NKWAIIVRLLLGEIPERTVFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSS 360
           NKWAIIVRLLLGEIPERTVFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSS
Sbjct: 301 NKWAIIVRLLLGEIPERTVFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSS 360

Query: 361 DRTNNLIVRLRHNVIRTGLRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDG 420
           DRTNNLIVRLRHNVIRTGLRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDG
Sbjct: 361 DRTNNLIVRLRHNVIRTGLRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDG 420

Query: 421 AIDATVDHANGWMVSKETGDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           AIDATVDHANGWMVSKETGDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 AIDATVDHANGWMVSKETGDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 476

[Close]

BLAST of Carg10198 vs. NCBI nr
Match: XP_023006175.1 (probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita maxima] >XP_023006176.1 probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita maxima])

HSP 1 Score: 820.8 bits (2119), Expect = 2.4e-234
Identity = 439/458 (95.85%), Postives = 443/458 (96.72%), Query Frame = 0


Query: 1   MTQDAEIKELPA--PLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMAL 60
           MTQDAE+KELPA      XXXXXX   LQLLKEIVSLIE GAYAREVRR+VRAIRLTMAL
Sbjct: 1   MTQDAEMKELPAXXXXXXXXXXXXXXXLQLLKEIVSLIEIGAYAREVRRIVRAIRLTMAL 60

Query: 61  RRKLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFC 120
           RRKLKASVLSQFLNLVLPPGSEV+TRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFC
Sbjct: 61  RRKLKASVLSQFLNLVLPPGSEVNTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFC 120

Query: 121 YLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEI 180
           YLIVLIFFIDQKKYDDAKACASASI RLKSLNRRTVDVLASRLYFYYSLSYELTGELAEI
Sbjct: 121 YLIVLIFFIDQKKYDDAKACASASIARLKSLNRRTVDVLASRLYFYYSLSYELTGELAEI 180

Query: 181 RGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASS 240
           RGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ   
Sbjct: 181 RGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-FC 240

Query: 241 KYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTV 300
           +YLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTV
Sbjct: 241 RYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTV 300

Query: 301 FMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGL 360
           FMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGL
Sbjct: 301 FMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGL 360

Query: 361 RNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETG 420
           RNISISYSRISL DVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETG
Sbjct: 361 RNISISYSRISLADVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETG 420

Query: 421 DIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           DIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 DIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457

[Close]

BLAST of Carg10198 vs. NCBI nr
Match: XP_008460112.1 (PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Cucumis melo] >XP_016902511.1 PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Cucumis melo])

HSP 1 Score: 817.4 bits (2110), Expect = 2.6e-233
Identity = 428/456 (93.86%), Postives = 436/456 (95.61%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQDAE+KELPAPL S      PS LQ LKEIVSLIETGAYAREVRR+VRAIRLTMALRR
Sbjct: 1   MTQDAEMKELPAPLSSSSSSASPSALQNLKEIVSLIETGAYAREVRRIVRAIRLTMALRR 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYL 120
           KLKASVLSQFLNLVLP GSEVHTRLSSFLPKEDD EMDVDTATQAP KHPLPEIEI+ YL
Sbjct: 61  KLKASVLSQFLNLVLPTGSEVHTRLSSFLPKEDDCEMDVDTATQAPAKHPLPEIEIYSYL 120

Query: 121 IVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRG 180
           IVLIF ID KKYDDAKACASASI RLK+LNRRTVDVLASRLYFYYSLSYELTG+LAEIRG
Sbjct: 121 IVLIFLIDHKKYDDAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAEIRG 180

Query: 181 NLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASSKY 240
           NLLALHRIATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ   +Y
Sbjct: 181 NLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-FCRY 240

Query: 241 LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300
           LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM
Sbjct: 241 LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300

Query: 301 QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360
           QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN
Sbjct: 301 QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360

Query: 361 ISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420
           ISISYSRISLVDVAKKLRLDS NPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI
Sbjct: 361 ISISYSRISLVDVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420

Query: 421 YSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           YSTNEPQ+AFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 YSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 455

[Close]

BLAST of Carg10198 vs. NCBI nr
Match: XP_022964508.1 (probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita moschata])

HSP 1 Score: 812.4 bits (2097), Expect = 8.4e-232
Identity = 422/456 (92.54%), Postives = 437/456 (95.83%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQDAE+KE+PAPLPS      PSTLQ LKEIVSLIETGAYAREVRR+VRAIRLTMALRR
Sbjct: 1   MTQDAEMKEIPAPLPSPTSSTSPSTLQHLKEIVSLIETGAYAREVRRIVRAIRLTMALRR 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYL 120
           KLKASVLSQFLNLVLP GSEV++RLSSFLPKE+D EMDVD+ TQAP KHPLPEIEIFCYL
Sbjct: 61  KLKASVLSQFLNLVLPSGSEVYSRLSSFLPKEEDCEMDVDSGTQAPSKHPLPEIEIFCYL 120

Query: 121 IVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRG 180
           IVLIF IDQKKYDDAKACASASI RLK+LNRRTVDVL+SRLYFYYSLSYEL G+LAEIRG
Sbjct: 121 IVLIFLIDQKKYDDAKACASASIARLKNLNRRTVDVLSSRLYFYYSLSYELNGDLAEIRG 180

Query: 181 NLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASSKY 240
           NLLALHRIATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ   +Y
Sbjct: 181 NLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-FCRY 240

Query: 241 LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300
           LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM
Sbjct: 241 LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300

Query: 301 QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360
           QKGMETAL+PYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN
Sbjct: 301 QKGMETALKPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360

Query: 361 ISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420
           ISISYSRISL DVAKKLRLDS NPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI
Sbjct: 361 ISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420

Query: 421 YSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           YSTN+PQ+AFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 YSTNDPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 455

[Close]

BLAST of Carg10198 vs. TAIR10
Match: AT1G20200.1 (PAM domain (PCI/PINT associated module) protein)

HSP 1 Score: 696.8 bits (1797), Expect = 9.4e-201
Identity = 362/460 (78.70%), Postives = 403/460 (87.61%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQD E+K+   P  S       ST+Q LKEI +LI+TG+Y +EVRR+ RA+RLT+ LR+
Sbjct: 1   MTQDVEMKDNNTPSQS-IISSSTSTMQNLKEIAALIDTGSYTKEVRRIARAVRLTIGLRQ 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQ----APVKHPLPEIEI 120
           KL  SVLS FL+  L PGSE H+RLSSF+PK D+ +M+VDTA+     AP KH   E+EI
Sbjct: 61  KLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLPAELEI 120

Query: 121 FCYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELA 180
           +CY IVL+F IDQKKY++AKAC+SASI RLK++NRRT+DV+ASRLYFYYSLSYE TG+LA
Sbjct: 121 YCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLA 180

Query: 181 EIRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQA 240
           EIRG LLALH  ATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 
Sbjct: 181 EIRGTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ- 240

Query: 241 SSKYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPER 300
             +YLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFR+QCNKWAI+VRLLLGEIPER
Sbjct: 241 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILVRLLLGEIPER 300

Query: 301 TVFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRT 360
           ++F QKGME ALRPYFELTNAVRIGDLELFRTV EKF  TF+ DRT+NLIVRLRHNVIRT
Sbjct: 301 SIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIVRLRHNVIRT 360

Query: 361 GLRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKE 420
           GLRNISISYSRISL DVAKKLRL+S NPVADAESIV+KAIRDGAIDAT+DH NG MVSKE
Sbjct: 361 GLRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCMVSKE 420

Query: 421 TGDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           TGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+HK
Sbjct: 421 TGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHK 458

[Close]

BLAST of Carg10198 vs. TAIR10
Match: AT1G75990.1 (PAM domain (PCI/PINT associated module) protein)

HSP 1 Score: 689.9 bits (1779), Expect = 1.1e-198
Identity = 356/459 (77.56%), Postives = 400/459 (87.15%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQD E+K+   P  S       STLQ LKEI +LI+TG+Y +EVRR+ RA+RLT+ LRR
Sbjct: 1   MTQDVEMKDNQTPTQS-VVSAPTSTLQNLKEIAALIDTGSYTKEVRRIARAVRLTVGLRR 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTA---TQAPVKHPLPEIEIF 120
           KL  SV+S FL+  L PGSE HTRLSSF+PK D+ +M+VDTA   +QAP KH   E+EI+
Sbjct: 61  KLTGSVISSFLDFALVPGSEAHTRLSSFVPKSDEHDMEVDTASSNSQAPPKHLPAELEIY 120

Query: 121 CYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAE 180
           CY IVL+F IDQKKY++AK C++ASI RLKS+NRRTVDV+AS+LYFYYSLSYELT +LAE
Sbjct: 121 CYFIVLLFLIDQKKYNEAKVCSTASIARLKSVNRRTVDVIASKLYFYYSLSYELTNDLAE 180

Query: 181 IRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQAS 240
           IR  LLALH  ATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ  
Sbjct: 181 IRSTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-F 240

Query: 241 SKYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 300
            +YLFYLGKIRTIQLEYTDAKESLLQAARKAP+A+LGFR+QCNKWAIIVRLLLGEIPER+
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVASLGFRIQCNKWAIIVRLLLGEIPERS 300

Query: 301 VFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTG 360
           +F QKGME  LRPYFELTNAVRIGDLELF  + EKF+ TF+ DRT+NLIVRLRHNVIRTG
Sbjct: 301 IFTQKGMEKTLRPYFELTNAVRIGDLELFGKIQEKFAKTFAEDRTHNLIVRLRHNVIRTG 360

Query: 361 LRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKET 420
           LRNISISYSRISL DVA+KLRL+S NPVADAESIV+KAIRDGAIDAT+DH NG MVSKET
Sbjct: 361 LRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCMVSKET 420

Query: 421 GDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           GDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+H+
Sbjct: 421 GDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHR 457

[Close]

BLAST of Carg10198 vs. Swiss-Prot
Match: sp|P93768|PSMD3_TOBAC (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Nicotiana tabacum OX=4097 GN=21D7 PE=2 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 6.6e-220
Identity = 400/459 (87.15%), Postives = 424/459 (92.37%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQD E+KE  AP  +      PS    LKEI SLIETGAYAREVRR+ RA+RLTMALR+
Sbjct: 1   MTQDVEMKEQAAPPSNSLSSTAPSIFHHLKEIASLIETGAYAREVRRISRAVRLTMALRK 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTAT---QAPVKHPLPEIEIF 120
           KLKAS LS FLN VL PGSEVH+RLSSFLPKED+ +M+VDTAT   QAP+K+PLPE+EI+
Sbjct: 61  KLKASSLSAFLNYVLVPGSEVHSRLSSFLPKEDEQDMEVDTATSGAQAPIKNPLPELEIY 120

Query: 121 CYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAE 180
           CYL+VLIF IDQKKY++AKAC+SASI RLK++NRRTVDVLASRLYFYYSL YELTG+LAE
Sbjct: 121 CYLLVLIFLIDQKKYNEAKACSSASIARLKTVNRRTVDVLASRLYFYYSLCYELTGDLAE 180

Query: 181 IRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQAS 240
           IRG LLALHRIATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ  
Sbjct: 181 IRGYLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-F 240

Query: 241 SKYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 300
           S+YLFYLGKIRTIQLEYTDAKESLLQAARKAP AALGFRVQCNKWAIIVRLLLGEIPERT
Sbjct: 241 SRYLFYLGKIRTIQLEYTDAKESLLQAARKAPQAALGFRVQCNKWAIIVRLLLGEIPERT 300

Query: 301 VFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTG 360
           VFMQKGME ALRPYFELTNAVRIGDLELFR VAEKFSSTFSSD TNNLIVRLRHNVIRTG
Sbjct: 301 VFMQKGMEKALRPYFELTNAVRIGDLELFRKVAEKFSSTFSSDGTNNLIVRLRHNVIRTG 360

Query: 361 LRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKET 420
           LRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDAT+DHANGWMVSKET
Sbjct: 361 LRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATLDHANGWMVSKET 420

Query: 421 GDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           GDIYSTNEPQ+AFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 GDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 458

[Close]

BLAST of Carg10198 vs. Swiss-Prot
Match: sp|Q06364|PSMD3_DAUCA (Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota OX=4039 GN=21D7 PE=1 SV=2)

HSP 1 Score: 749.2 bits (1933), Expect = 2.9e-215
Identity = 387/460 (84.13%), Postives = 422/460 (91.74%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPS-XXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALR 60
           MTQD E+KE+PAP PS       PSTLQ LKEI SLIE+GAYAREVRR++RA+RLT+ALR
Sbjct: 1   MTQDVEMKEVPAPAPSNSVTAATPSTLQHLKEIASLIESGAYAREVRRILRAVRLTIALR 60

Query: 61  RKLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAP---VKHPLPEIEI 120
           +KL ASV++ FLN  L PGSEVH RL+S+LPKED+ +M+VDTA  A     KH LPE+EI
Sbjct: 61  KKLNASVVNAFLNFSLVPGSEVHARLASYLPKEDEHDMEVDTAMSATTTLAKHSLPELEI 120

Query: 121 FCYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELA 180
           +CYL+VLIF IDQKKY +AKAC+SASI R+K+LNRRTV+VLASRLYFYYSLSYELTG+LA
Sbjct: 121 YCYLLVLIFLIDQKKYSEAKACSSASIARVKNLNRRTVEVLASRLYFYYSLSYELTGDLA 180

Query: 181 EIRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQA 240
           EIRGNLLALHRIATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 
Sbjct: 181 EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ- 240

Query: 241 SSKYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPER 300
             +YLFYLGKIRTIQLEYTDAKES LQAARKAP+AALGFRVQCNKWA+IVRLLLGEIPER
Sbjct: 241 FCRYLFYLGKIRTIQLEYTDAKESXLQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPER 300

Query: 301 TVFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRT 360
           TVFMQKGME ALRPYF LTNAVRIGDLELFR VA+KF+STF++DRT+NLIVRLRHNVIRT
Sbjct: 301 TVFMQKGMEKALRPYFXLTNAVRIGDLELFRXVADKFASTFTADRTHNLIVRLRHNVIRT 360

Query: 361 GLRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKE 420
           GLRNISISYSRISLVDVA+KLRLDSPNPVADAESIVSKAIRDGAIDAT+DHANGWMVSKE
Sbjct: 361 GLRNISISYSRISLVDVARKLRLDSPNPVADAESIVSKAIRDGAIDATIDHANGWMVSKE 420

Query: 421 TGDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           TGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFP NSHK
Sbjct: 421 TGDIYSTNEPQAAFNSRIAFCLNMHNEAVRALRFPANSHK 459

[Close]

BLAST of Carg10198 vs. Swiss-Prot
Match: sp|Q9LNU4|PSD3A_ARATH (26S proteasome non-ATPase regulatory subunit 3 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPN3A PE=1 SV=3)

HSP 1 Score: 696.8 bits (1797), Expect = 1.7e-199
Identity = 362/460 (78.70%), Postives = 403/460 (87.61%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQD E+K+   P  S       ST+Q LKEI +LI+TG+Y +EVRR+ RA+RLT+ LR+
Sbjct: 1   MTQDVEMKDNNTPSQS-IISSSTSTMQNLKEIAALIDTGSYTKEVRRIARAVRLTIGLRQ 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQ----APVKHPLPEIEI 120
           KL  SVLS FL+  L PGSE H+RLSSF+PK D+ +M+VDTA+     AP KH   E+EI
Sbjct: 61  KLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLPAELEI 120

Query: 121 FCYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELA 180
           +CY IVL+F IDQKKY++AKAC+SASI RLK++NRRT+DV+ASRLYFYYSLSYE TG+LA
Sbjct: 121 YCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQTGDLA 180

Query: 181 EIRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQA 240
           EIRG LLALH  ATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ 
Sbjct: 181 EIRGTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ- 240

Query: 241 SSKYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPER 300
             +YLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFR+QCNKWAI+VRLLLGEIPER
Sbjct: 241 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRIQCNKWAILVRLLLGEIPER 300

Query: 301 TVFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRT 360
           ++F QKGME ALRPYFELTNAVRIGDLELFRTV EKF  TF+ DRT+NLIVRLRHNVIRT
Sbjct: 301 SIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEKFLDTFAQDRTHNLIVRLRHNVIRT 360

Query: 361 GLRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKE 420
           GLRNISISYSRISL DVAKKLRL+S NPVADAESIV+KAIRDGAIDAT+DH NG MVSKE
Sbjct: 361 GLRNISISYSRISLPDVAKKLRLNSENPVADAESIVAKAIRDGAIDATIDHKNGCMVSKE 420

Query: 421 TGDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           TGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+HK
Sbjct: 421 TGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHK 458

[Close]

BLAST of Carg10198 vs. Swiss-Prot
Match: sp|Q9LQR8|PSD3B_ARATH (26S proteasome non-ATPase regulatory subunit 3 homolog B OS=Arabidopsis thaliana OX=3702 GN=RPN3B PE=1 SV=2)

HSP 1 Score: 689.9 bits (1779), Expect = 2.1e-197
Identity = 356/459 (77.56%), Postives = 400/459 (87.15%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQD E+K+   P  S       STLQ LKEI +LI+TG+Y +EVRR+ RA+RLT+ LRR
Sbjct: 1   MTQDVEMKDNQTPTQS-VVSAPTSTLQNLKEIAALIDTGSYTKEVRRIARAVRLTVGLRR 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTA---TQAPVKHPLPEIEIF 120
           KL  SV+S FL+  L PGSE HTRLSSF+PK D+ +M+VDTA   +QAP KH   E+EI+
Sbjct: 61  KLTGSVISSFLDFALVPGSEAHTRLSSFVPKSDEHDMEVDTASSNSQAPPKHLPAELEIY 120

Query: 121 CYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAE 180
           CY IVL+F IDQKKY++AK C++ASI RLKS+NRRTVDV+AS+LYFYYSLSYELT +LAE
Sbjct: 121 CYFIVLLFLIDQKKYNEAKVCSTASIARLKSVNRRTVDVIASKLYFYYSLSYELTNDLAE 180

Query: 181 IRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQAS 240
           IR  LLALH  ATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ  
Sbjct: 181 IRSTLLALHHSATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-F 240

Query: 241 SKYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 300
            +YLFYLGKIRTIQLEYTDAKESLLQAARKAP+A+LGFR+QCNKWAIIVRLLLGEIPER+
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVASLGFRIQCNKWAIIVRLLLGEIPERS 300

Query: 301 VFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTG 360
           +F QKGME  LRPYFELTNAVRIGDLELF  + EKF+ TF+ DRT+NLIVRLRHNVIRTG
Sbjct: 301 IFTQKGMEKTLRPYFELTNAVRIGDLELFGKIQEKFAKTFAEDRTHNLIVRLRHNVIRTG 360

Query: 361 LRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKET 420
           LRNISISYSRISL DVA+KLRL+S NPVADAESIV+KAIRDGAIDAT+DH NG MVSKET
Sbjct: 361 LRNISISYSRISLQDVAQKLRLNSANPVADAESIVAKAIRDGAIDATIDHKNGCMVSKET 420

Query: 421 GDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           GDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+H+
Sbjct: 421 GDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPNTHR 457

[Close]

BLAST of Carg10198 vs. Swiss-Prot
Match: sp|Q2KJ46|PSMD3_BOVIN (26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus OX=9913 GN=PSMD3 PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.1e-97
Identity = 201/438 (45.89%), Postives = 291/438 (66.44%), Query Frame = 0


Query: 25  TLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRRKLKASVLSQFLNLVLPPGSEVHTR 84
           TL+ +KE V  +E     +E R V+RA+R+  +  R+L   VL + ++      +     
Sbjct: 71  TLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDF 130

Query: 85  LSSFLPKEDDFEMDVD------TATQAPVKHPLPEIEIFCYLIVLIFFIDQKKYDDAKAC 144
           L  FL +  D E D+        A  AP+   LPE+E +  L+++IF ++ K+Y +A+  
Sbjct: 131 LLPFLEEPMDTEADLQFRPRTGKAASAPL---LPEVEAYLQLLMVIFLMNSKRYKEAQKI 190

Query: 145 ASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRGNLLALHRIATLRHDELGQ 204
           +   + ++ + NRR +D++A++ Y+Y++  YE   +L  +R  L A  R ATLRHD  GQ
Sbjct: 191 SDDLMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDTDGQ 250

Query: 205 ETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASSKYLFYLGKIRTIQLEYTDAK 264
            T+LNLLLRNYLHY+LYDQAEKL SK+  F   +N    ++YL+Y G+I+ IQLEY++A+
Sbjct: 251 ATLLNLLLRNYLHYSLYDQAEKLVSKSV-FPEQANNNEWARYLYYTGRIKAIQLEYSEAR 310

Query: 265 ESLLQAARKAP-IAALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMETALRPYFELTNA 324
            ++  A RKAP   A+GF+   +K  I+V LLLGEIP+R  F Q  ++ +L PYF LT A
Sbjct: 311 RTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQA 370

Query: 325 VRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLVDVAKKL 384
           VR G+L  F  V ++F   F +D T  LI+RLRHNVI+TG+R IS+SYSRISL D+A+KL
Sbjct: 371 VRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKL 430

Query: 385 RLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQMAFNSRIAFC 444
           +LDSP    DAE IV+KAIRDG I+A+++H  G++ SKE  DIYST EPQ+AF+ RI+FC
Sbjct: 431 QLDSPE---DAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFC 490

Query: 445 LNMHNEAVRALRFPPNSH 456
           L++HN +V+A+RFPP S+
Sbjct: 491 LDIHNMSVKAMRFPPKSY 501

[Close]

BLAST of Carg10198 vs. TrEMBL
Match: tr|A0A1S4E2Q6|A0A1S4E2Q6_CUCME (probable 26S proteasome non-ATPase regulatory subunit 3 OS=Cucumis melo OX=3656 GN=LOC103499019 PE=4 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 1.7e-233
Identity = 428/456 (93.86%), Postives = 436/456 (95.61%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQDAE+KELPAPL S      PS LQ LKEIVSLIETGAYAREVRR+VRAIRLTMALRR
Sbjct: 1   MTQDAEMKELPAPLSSSSSSASPSALQNLKEIVSLIETGAYAREVRRIVRAIRLTMALRR 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYL 120
           KLKASVLSQFLNLVLP GSEVHTRLSSFLPKEDD EMDVDTATQAP KHPLPEIEI+ YL
Sbjct: 61  KLKASVLSQFLNLVLPTGSEVHTRLSSFLPKEDDCEMDVDTATQAPAKHPLPEIEIYSYL 120

Query: 121 IVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRG 180
           IVLIF ID KKYDDAKACASASI RLK+LNRRTVDVLASRLYFYYSLSYELTG+LAEIRG
Sbjct: 121 IVLIFLIDHKKYDDAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAEIRG 180

Query: 181 NLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASSKY 240
           NLLALHRIATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ   +Y
Sbjct: 181 NLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-FCRY 240

Query: 241 LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300
           LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM
Sbjct: 241 LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300

Query: 301 QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360
           QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN
Sbjct: 301 QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360

Query: 361 ISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420
           ISISYSRISLVDVAKKLRLDS NPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI
Sbjct: 361 ISISYSRISLVDVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420

Query: 421 YSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           YSTNEPQ+AFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 421 YSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 455

[Close]

BLAST of Carg10198 vs. TrEMBL
Match: tr|A0A0A0KCX2|A0A0A0KCX2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077440 PE=4 SV=1)

HSP 1 Score: 793.9 bits (2049), Expect = 2.1e-226
Identity = 416/456 (91.23%), Postives = 427/456 (93.64%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQDAE+KELPAPL S      PST+Q LKEIVSLIETGAYAREVRR+VRAIRLTMALRR
Sbjct: 1   MTQDAEMKELPAPLSSSSSSVSPSTIQNLKEIVSLIETGAYAREVRRIVRAIRLTMALRR 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYL 120
           KLKASVLSQFLNLVLP GSEVHTRLSSFLPKEDD EMDVDTATQAP KH LPEIEIFCYL
Sbjct: 61  KLKASVLSQFLNLVLPTGSEVHTRLSSFLPKEDDCEMDVDTATQAPAKHHLPEIEIFCYL 120

Query: 121 IVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRG 180
           IVLIF ID KKY DAKACASASI RLK+LNRRTVDVLASRLYFYYSLSYELTG+LAEIRG
Sbjct: 121 IVLIFLIDHKKYGDAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAEIRG 180

Query: 181 NLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASSKY 240
           NLLALHRIATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFE HSNQQ   +Y
Sbjct: 181 NLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEGHSNQQ-FCRY 240

Query: 241 LFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300
           LFYLGKIRTIQLEYTDAK SLLQAA KAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM
Sbjct: 241 LFYLGKIRTIQLEYTDAKGSLLQAAGKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFM 300

Query: 301 QKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360
           QK ME ALRPYFELTNAVRIGDLELF+ VAE+FSSTFSSDRTNNLIVRLRHNVIRTGLRN
Sbjct: 301 QKHMEKALRPYFELTNAVRIGDLELFKIVAERFSSTFSSDRTNNLIVRLRHNVIRTGLRN 360

Query: 361 ISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420
           ISISYSRISL DVA+KLRLDS NP+ADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI
Sbjct: 361 ISISYSRISLADVAQKLRLDSANPIADAESIVSKAIRDGAIDATVDHANGWMVSKETGDI 420

Query: 421 YSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           YSTNEPQ AFNSRIAFCLN HNEAVRALRFPPNSHK
Sbjct: 421 YSTNEPQAAFNSRIAFCLNTHNEAVRALRFPPNSHK 455

[Close]

BLAST of Carg10198 vs. TrEMBL
Match: tr|A0A1S3BJ75|A0A1S3BJ75_CUCME (probable 26S proteasome non-ATPase regulatory subunit 3 OS=Cucumis melo OX=3656 GN=LOC103490276 PE=4 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.0e-225
Identity = 411/455 (90.33%), Postives = 429/455 (94.29%), Query Frame = 0


Query: 2   TQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRRK 61
           TQDAE+KELPAP+ S      PSTLQ LKEIVSL+ETGAYAREVRR+VRAIRLTMALRRK
Sbjct: 3   TQDAEMKELPAPISS-----SPSTLQHLKEIVSLLETGAYAREVRRIVRAIRLTMALRRK 62

Query: 62  LKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYLI 121
           LKAS LS FLN  LPPGS+VHTRLSSF+PKE+D+EMDVD+ATQ P KHPLPEIEIFCYLI
Sbjct: 63  LKASDLSSFLNFALPPGSDVHTRLSSFIPKEEDYEMDVDSATQPPAKHPLPEIEIFCYLI 122

Query: 122 VLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRGN 181
           +LIF IDQKKY +AKACASASI RLK+LNRRTVDVLASRLYFYYSLSYELTG+LAEIRGN
Sbjct: 123 LLIFLIDQKKYGEAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAEIRGN 182

Query: 182 LLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASSKYL 241
           LLALHRIATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ   +YL
Sbjct: 183 LLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-FCRYL 242

Query: 242 FYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFMQ 301
           FYLGKIRTIQLEYTDAKESLLQAARKAPIAAL FRVQCNKWAIIVRLLLGEIPERTVFMQ
Sbjct: 243 FYLGKIRTIQLEYTDAKESLLQAARKAPIAALRFRVQCNKWAIIVRLLLGEIPERTVFMQ 302

Query: 302 KGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNI 361
           KGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNI
Sbjct: 303 KGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNI 362

Query: 362 SISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIY 421
           SISYSRISL D+AKKLRLDS NP+ADAESIVSKA RDGAIDATVDH N WMVSKETGDIY
Sbjct: 363 SISYSRISLADIAKKLRLDSENPIADAESIVSKATRDGAIDATVDHGNKWMVSKETGDIY 422

Query: 422 STNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           STNEPQ+AFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 423 STNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHK 451

[Close]

BLAST of Carg10198 vs. TrEMBL
Match: tr|A0A0A0K1C2|A0A0A0K1C2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014490 PE=4 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 2.8e-223
Identity = 411/455 (90.33%), Postives = 425/455 (93.41%), Query Frame = 0


Query: 2   TQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRRK 61
           TQDAE+KELPAP+ S      PSTLQ LKEIVSL+ETGAYAREVRR+VRAIRLTMALRRK
Sbjct: 3   TQDAEMKELPAPISS-----SPSTLQNLKEIVSLLETGAYAREVRRIVRAIRLTMALRRK 62

Query: 62  LKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDTATQAPVKHPLPEIEIFCYLI 121
           LKASVLS FLN  LPPGS+VHTRLSSF+PKE+D EMDVD ATQ P KH LPEIEIFCYLI
Sbjct: 63  LKASVLSSFLNFALPPGSDVHTRLSSFIPKEEDCEMDVDLATQTPSKHLLPEIEIFCYLI 122

Query: 122 VLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAEIRGN 181
           +LIF IDQKKY +AKACASASI RLK+LNRRTVDVLASRLYFYYSLSYELTG+LAEIRGN
Sbjct: 123 LLIFLIDQKKYGEAKACASASIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAEIRGN 182

Query: 182 LLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQASSKYL 241
           LLALHRIATLRHDELGQET+LNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ   +YL
Sbjct: 183 LLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQ-FCRYL 242

Query: 242 FYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFMQ 301
           FYLGKIRTIQLEYTDAKESLLQAARKAPIAAL FRVQCNKWAIIVRLLLGEIPERTVFMQ
Sbjct: 243 FYLGKIRTIQLEYTDAKESLLQAARKAPIAALRFRVQCNKWAIIVRLLLGEIPERTVFMQ 302

Query: 302 KGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNI 361
           KGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNI
Sbjct: 303 KGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNI 362

Query: 362 SISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIY 421
           SISYSRISL DVAKKLRLDS N +ADAESIVSKA RDGAIDATVDH N WMVSKETGDIY
Sbjct: 363 SISYSRISLADVAKKLRLDSENLIADAESIVSKATRDGAIDATVDHGNRWMVSKETGDIY 422

Query: 422 STNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           STNEPQ AFNSRIAFCLNMHNEAVRALRFPPNSHK
Sbjct: 423 STNEPQFAFNSRIAFCLNMHNEAVRALRFPPNSHK 451

[Close]

BLAST of Carg10198 vs. TrEMBL
Match: tr|A0A2P5DSE5|A0A2P5DSE5_PARAD (Winged helix-turn-helix DNA-binding domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_036330 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 7.1e-219
Identity = 400/459 (87.15%), Postives = 428/459 (93.25%), Query Frame = 0


Query: 1   MTQDAEIKELPAPLPSXXXXXXPSTLQLLKEIVSLIETGAYAREVRRVVRAIRLTMALRR 60
           MTQD E+KEL AP  S      PSTLQ LKEI SLIETGAYAREVRR+VRA+RLTMALRR
Sbjct: 1   MTQDVEMKELQAPSNS-VSSATPSTLQHLKEIASLIETGAYAREVRRIVRAVRLTMALRR 60

Query: 61  KLKASVLSQFLNLVLPPGSEVHTRLSSFLPKEDDFEMDVDT---ATQAPVKHPLPEIEIF 120
           KLKASVLS FLN VL PGSEVH+RLSSF+PKED+ +MDVDT   ATQAPVKH LPE+EI+
Sbjct: 61  KLKASVLSAFLNFVLSPGSEVHSRLSSFVPKEDEHDMDVDTATSATQAPVKHSLPELEIY 120

Query: 121 CYLIVLIFFIDQKKYDDAKACASASITRLKSLNRRTVDVLASRLYFYYSLSYELTGELAE 180
           CYL+VL+F IDQK+Y +AKACAS SI RLK+LNRRTVDVLASRLYFYYSLSYELTG+LAE
Sbjct: 121 CYLLVLLFLIDQKRYSEAKACASPSIARLKNLNRRTVDVLASRLYFYYSLSYELTGDLAE 180

Query: 181 IRGNLLALHRIATLRHDELGQETILNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQAS 240
           IRGNLLALHRIATLRHDELGQET+LNLLLRNYLHYN YDQAEKLRSKAPRFEAHSNQQ  
Sbjct: 181 IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNQYDQAEKLRSKAPRFEAHSNQQ-F 240

Query: 241 SKYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERT 300
            +YLFYLGKIRTIQLEYTDAKESLLQAARKAP+AALGFR+QCNKWA+IVRLLLGEIPERT
Sbjct: 241 CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRIQCNKWAVIVRLLLGEIPERT 300

Query: 301 VFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSSTFSSDRTNNLIVRLRHNVIRTG 360
           VFMQKGME ALRPYFELTNAVRIGDLELFR+VAEKFS+TF+SDRT+NLIVRLRHNVIRTG
Sbjct: 301 VFMQKGMEKALRPYFELTNAVRIGDLELFRSVAEKFSNTFNSDRTHNLIVRLRHNVIRTG 360

Query: 361 LRNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATVDHANGWMVSKET 420
           LRNISISYSRISLVDVAKKLRLDS NPVADAESIVSKAIRDGAIDAT+DHANGWMVSKET
Sbjct: 361 LRNISISYSRISLVDVAKKLRLDSANPVADAESIVSKAIRDGAIDATLDHANGWMVSKET 420

Query: 421 GDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNSHK 457
           GDIYSTNEPQ AF++RIAFCLN+HNEAVRALRFPPNSHK
Sbjct: 421 GDIYSTNEPQTAFDTRIAFCLNLHNEAVRALRFPPNSHK 457

The following BLAST results are available for this feature:

BLAST of Carg10198 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549020.1	2.0e-241	97.81	probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita pepo subsp. p...	[more]
XP_022959338.1	1.8e-237	92.24	probable 26S proteasome non-ATPase regulatory subunit 3 isoform X1 [Cucurbita mo...	[more]
XP_023006175.1	2.4e-234	95.85	probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita maxima] >XP_0...	[more]
XP_008460112.1	2.6e-233	93.86	PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Cucumis melo...	[more]
XP_022964508.1	8.4e-232	92.54	probable 26S proteasome non-ATPase regulatory subunit 3 [Cucurbita moschata]	[more]

BLAST of Carg10198 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20200.1	9.4e-201	78.70	PAM domain (PCI/PINT associated module) protein	[more]
AT1G75990.1	1.1e-198	77.56	PAM domain (PCI/PINT associated module) protein	[more]

BLAST of Carg10198 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P93768\|PSMD3_TOBAC	6.6e-220	87.15	Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Nicotiana tabacum OX=...	[more]
sp\|Q06364\|PSMD3_DAUCA	2.9e-215	84.13	Probable 26S proteasome non-ATPase regulatory subunit 3 OS=Daucus carota OX=4039...	[more]
sp\|Q9LNU4\|PSD3A_ARATH	1.7e-199	78.70	26S proteasome non-ATPase regulatory subunit 3 homolog A OS=Arabidopsis thaliana...	[more]
sp\|Q9LQR8\|PSD3B_ARATH	2.1e-197	77.56	26S proteasome non-ATPase regulatory subunit 3 homolog B OS=Arabidopsis thaliana...	[more]
sp\|Q2KJ46\|PSMD3_BOVIN	1.1e-97	45.89	26S proteasome non-ATPase regulatory subunit 3 OS=Bos taurus OX=9913 GN=PSMD3 PE...	[more]

BLAST of Carg10198 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E2Q6\|A0A1S4E2Q6_CUCME	1.7e-233	93.86	probable 26S proteasome non-ATPase regulatory subunit 3 OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A0A0KCX2\|A0A0A0KCX2_CUCSA	2.1e-226	91.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077440 PE=4 SV=1	[more]
tr\|A0A1S3BJ75\|A0A1S3BJ75_CUCME	1.0e-225	90.33	probable 26S proteasome non-ATPase regulatory subunit 3 OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A0A0K1C2\|A0A0A0K1C2_CUCSA	2.8e-223	90.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014490 PE=4 SV=1	[more]
tr\|A0A2P5DSE5\|A0A2P5DSE5_PARAD	7.1e-219	87.15	Winged helix-turn-helix DNA-binding domain containing protein OS=Parasponia ande...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000502	proteasome complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0030234	enzyme regulator activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042176	regulation of protein catabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR013586	26S_Psome_reg_C
IPR000717	PCI_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042176	regulation of protein catabolic process
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0030234	enzyme regulator activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10198-RA	Carg10198-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 453..480
None	No IPR available	SMART	SM00753	PINT	coord: 344..437 e-value: 4.4E-25 score: 99.3
None	No IPR available	GENE3D	G3DSA:1.25.40.570		coord: 228..359 e-value: 4.1E-29 score: 103.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 450..486
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 450..479
None	No IPR available	PANTHER	PTHR10758:SF7	SUBFAMILY NOT NAMED	coord: 3..486
None	No IPR available	PANTHER	PTHR10758	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3	coord: 3..486
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 344..437 e-value: 4.4E-25 score: 99.3
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 310..415 e-value: 8.4E-22 score: 77.6
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 238..419 score: 24.914
IPR013586	26S proteasome regulatory subunit, C-terminal	PFAM	PF08375	Rpn3_C	coord: 419..485 e-value: 1.9E-27 score: 95.4
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	SSF46785	"Winged helix" DNA-binding domain	coord: 346..420

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10198	Cla006966	Watermelon (97103) v1	carwmB0221
Carg10198	Csa6G077440	Cucumber (Chinese Long) v2	carcuB0259
Carg10198	MELO3C022496	Melon (DHL92) v3.5.1	carmeB0231
Carg10198	ClCG06G000440	Watermelon (Charleston Gray)	carwcgB0223
Carg10198	CSPI06G05930	Wild cucumber (PI 183967)	carcpiB0263
Carg10198	Cucsa.362730	Cucumber (Gy14) v1	carcgyB0271
Carg10198	CmaCh08G009580	Cucurbita maxima (Rimu)	carcmaB0321
Carg10198	CmaCh17G000360	Cucurbita maxima (Rimu)	carcmaB0314
Carg10198	CmoCh08G009260	Cucurbita moschata (Rifu)	carcmoB0326
Carg10198	CmoCh17G000370	Cucurbita moschata (Rifu)	carcmoB0320
Carg10198	Cp4.1LG12g00270	Cucurbita pepo (Zucchini)	carcpeB0322
Carg10198	Cp4.1LG17g02680	Cucurbita pepo (Zucchini)	carcpeB0323
Carg10198	CsGy6G005920	Cucumber (Gy14) v2	carcgybB0248
Carg10198	MELO3C022496.2	Melon (DHL92) v3.6.1	carmedB0238
Carg10198	CsaV3_6G006240	Cucumber (Chinese Long) v3	carcucB0263
Carg10198	Bhi12G002284	Wax gourd	carwgoB0279

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg10198	Carg11084	Silver-seed gourd	carcarB267

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10198	Watermelon (97103) v2	carwmbB0229
Carg10198	Watermelon (97103) v2	carwmbB0232
Carg10198	Cucurbita pepo (Zucchini)	carcpeB0327
Carg10198	Silver-seed gourd	carcarB261
Carg10198	Cucumber (Gy14) v2	carcgybB0245
Carg10198	Cucumber (Gy14) v1	carcgyB0269
Carg10198	Cucurbita maxima (Rimu)	carcmaB0313
Carg10198	Cucurbita maxima (Rimu)	carcmaB0317
Carg10198	Cucurbita moschata (Rifu)	carcmoB0319
Carg10198	Cucurbita moschata (Rifu)	carcmoB0322
Carg10198	Wild cucumber (PI 183967)	carcpiB0261
Carg10198	Cucumber (Chinese Long) v2	carcuB0257
Carg10198	Cucumber (Chinese Long) v3	carcucB0260
Carg10198	Bottle gourd (USVL1VR-Ls)	carlsiB203
Carg10198	Bottle gourd (USVL1VR-Ls)	carlsiB206
Carg10198	Melon (DHL92) v3.5.1	carmeB0236
Carg10198	Watermelon (Charleston Gray)	carwcgB0220
Carg10198	Watermelon (97103) v1	carwmB0218