Carg10147 (gene) Silver-seed gourd

Overview
NameCarg10147
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionhigh mobility group B protein 15
LocationCucurbita_argyrosperma_scaffold_039 : 714030 .. 717082 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCGACTTCTTTTGCTGGCAGGAAGCAACTGCCAGTGATTGAAGCTACTTCTAGCTGTATACCATACCCACCACCGCAGACAACATATGAGGATATTGTAGCTAATCCAAATATCTTTATGGCATCCTTGGAGAAGCTCCATTCTGTCATGGGAACCAAGTTCATGTATTCTTCTTAAACACTTCCTCCTTTATATGTGAAGTGGACCTTGTCATTCATTTAATGGAAGTTGCTCAAATCTTGTTCTACATTTTGTTGGTTTTGCAATTAGATTCTGTTTTTTACTTTTGGCTCTTGAAAATGCAGGATCCCGATTATTGGTGGGAAAGAACTAGACCTGCATCGACTTTTCGTGGAAGTTACTTCTCGTGGTGGCATTGAGAAGGTAAAATAGCTTGCTTTGAATCTCGTGATCTTGCATATCTGAAACTTGATGCTTGACCTTGGAGTCGAAACTTGTTCGTTATGGGCAAATATAAGGCCATTATTTGAGCCTATTTCCCGCTTTTTCATTCACTTTCACGATTGTTAAATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAATCTCTCTTTAGTAAAGGGCCAAAGCGATGATACGTAAAGGGCCAAAGCGGACAATATCTGCTAGCGGTGGGCTTGGTTGTTACAAATGATATCAGACCCAGACACCGAGTGGTGTACCAGTGAGGACGCTGGGCTCCCAAGGTGGGTGAATTGTGAGATTGATCCCACATCGGTTGGGGAGGGAAACAAAATATTCCTTATAAGAGTGTGGAAACCTCTCCCTAACAGACACGTTTCGATGTCCCAGTTTTTTTTCTCTTTTAGTAAAGGTTTCGATGCTGTAATCCTTACGGAATGATGTCATTCGGAGTATGTTTATCAGATTCTCGGCCAATATTGAATATGATTTCTTATTGAACGAAGACCAGACGACCTGGTATCTAAAATCATGATAAATATTCTCATCTAATGAGTTATAGGCCTTTTTCCTTCAGTTATTCTTTGGACCTATGAAGTTCTGTCATGCTATTGAGTCTTTTTGCTATGGTTTTAGTCCTTACTTCTCCACGGTCGACGGATTAAAGTTGAATCATTAAAGCACAATATCCGTTACAAATTCATATGATCGAGCAGCTCGAGTAGCTCGAGCATGTAACAATCTGAATTTTACAGGTTATAAGAGAAAGAAGATGGAAAGAAGTAACTTCAGTTTTCAATTTTCCATCAACGGCCACCAATGCGTCTTTCGTTCTGAGGAAGTATTATCTTTCATTGCTTCATCATTTTGAACAGATTTACTTCTTTAAAGCTGTGGGATGGACACCAATAATTTCTGGCAAGTGTTAATAGACTAAACCCACCCTCCCCCCCCTAAGGCTTCTGCTCTTGATTTTCTAACACAGCAATCTTTCAGATTCCTCTCCGTGCCCAAGTGCAGCGTCGATTCCTACCCAAGGGACGGCCTCTATGTTGCCACCATCAGATAATCAGGCGGCGTCCCAGCCGCCACGGAGTACTGCAACTGAACTTCCAGCAGGTGTATTCTGTTGGTCCTTTAGAGATATACATGGAAAATAAGTCGGGATGCAATATACTTGCGTGCTTGAGCTTCAATTTCTTTATGTGCTTGCGTCGTATTTTATAGTCGATAACGCATGGTTTCTCTTGGTTGTAACCACATCTGATTAGTAATTAGTTAAATTTTCTTCTCCCTACAGTTGCTCCGGGTTCGACATCTCCAGCAGGAGGGTTTCCAGTGATCGGAGTCATTGACGGGAAATTTGATAGCGGATATCTTATTACTGTTACTGTAGGGACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCTGAGCAACCTGCTCAGCCTGTTGGTGTTTTTGCCAAAGATGGTACACCAAATGCTCATCAGCATCGCCGTCGGAAGAAATCTGAGATAAGGCGAAGGGATCCCGGTCATCCGAAGCCAAATAGAAGCGGCTACAACTTCTTCTTTGCTGAGCAGCATGCTAGACTCAAACCATTACACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGACCTTTGGAATAAACTTAAAGAGTCTGAAAGAACAGTAAGGATTGCAATACTCTGTCGTTTATGCTTTTGGAATTCGTCACATCTCTGGTACTAGCCGGTATCGACGAGTTTTCTTTACTTGCAGGTTTACCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAGTCGAGATGGAGGATTACAGAGAGAAGCTGAGGACAGGCCAAGTCATCAGTGATGCAGTGCCTTTACAGCAGCGTCTTCCCGAGCCAGACCTGAACATGGTCTATGCTGACAAGAACGAAGAAACGGAGGATGGCGACTCTCCACAAACCCCAGATAACGATACAAGCTATGTTGAAGGCAACTCTGGAGAGTATAAAATGGAAGTGAAGGAGGAGGACGAAGAGGAGGAAGAGGAGGACTCGGAAGAAGATGCATCTCCGAAAGGAATTGTTATTGTGGAGGATGTTAATGCTTTAGTCGAGGAGGAACAGTGCAAGACGGGAACAGCCGAAGAGGATGTTAGAAAAGAGAGTAGCACGGTTGGGGACGATAAAGAAGTTTACGCTGGGGAGTCGGTAATGATGGAGGTGGATGCAAAGGAAGAACCAGAACCAACAACAGACATTCGAGAAAATTAAGGTACTATAGTGCTCAGTTTTTGCAGTGCTTCATCATGTTTCCATTACTTCAGCTAATACTTGTAAAGCTTTCAAGTTTTCTGAAAGATTTTGAGATTCTTATCAGGGAAAAGTTTTGGATCTTTCAATCACTTCTGTTTTAGGAAGAAATTTTGTTGCCTTCTGTTGAAACATTCCAACTGGAATCACTCCCTGATTTGTTTATAAGTGAAGCTGGCTAGCTAGGTCGAGACATCGGGTCACTCCCCTTATGATTATACAATGTATGAACTAGGATCGTCAATTAATCTTTAATAGAGATCTATCGCAACTGTCGGGTCT

mRNA sequence

ATGGCCTCGACTTCTTTTGCTGGCAGGAAGCAACTGCCAGTGATTGAAGCTACTTCTAGCTGTATACCATACCCACCACCGCAGACAACATATGAGGATATTGTAGCTAATCCAAATATCTTTATGGCATCCTTGGAGAAGCTCCATTCTGTCATGGGAACCAAGTTCATGATCCCGATTATTGGTGGGAAAGAACTAGACCTGCATCGACTTTTCGTGGAAGTTACTTCTCGTGGTGGCATTGAGAAGGTTATAAGAGAAAGAAGATGGAAAGAAGTAACTTCAGTTTTCAATTTTCCATCAACGGCCACCAATGCGTCTTTCGTTCTGAGGAATGCAGCGTCGATTCCTACCCAAGGGACGGCCTCTATGTTGCCACCATCAGATAATCAGGCGGCGTCCCAGCCGCCACGGAGTACTGCAACTGAACTTCCAGCAGTTGCTCCGGGTTCGACATCTCCAGCAGGAGGGTTTCCAGTGATCGGAGTCATTGACGGGAAATTTGATAGCGGATATCTTATTACTGTTACTGTAGGGACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCTGAGCAACCTGCTCAGCCTGTTGGTGTTTTTGCCAAAGATGGTACACCAAATGCTCATCAGCATCGCCGTCGGAAGAAATCTGAGATAAGGCGAAGGGATCCCGGTCATCCGAAGCCAAATAGAAGCGGCTACAACTTCTTCTTTGCTGAGCAGCATGCTAGACTCAAACCATTACACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGACCTTTGGAATAAACTTAAAGAGTCTGAAAGAACAGTTTACCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAGTCGAGATGGAGGATTACAGAGAGAAGCTGAGGACAGGCCAAGTCATCAGTGATGCAGTGCCTTTACAGCAGCGTCTTCCCGAGCCAGACCTGAACATGGTCTATGCTGACAAGAACGAAGAAACGGAGGATGGCGACTCTCCACAAACCCCAGATAACGATACAAGCTATGTTGAAGGCAACTCTGGAGAGTATAAAATGGAAGTGAAGGAGGAGGACGAAGAGGAGGAAGAGGAGGACTCGGAAGAAGATGCATCTCCGAAAGGAATTGTTATTGTGGAGGATGTTAATGCTTTAGTCGAGGAGGAACAGTGCAAGACGGGAACAGCCGAAGAGGATGTTAGAAAAGAGAGTAGCACGGTTGGGGACGATAAAGAAGTTTACGCTGGGGAGTCGGTAATGATGGAGGTGGATGCAAAGGAAGAACCAGAACCAACAACAGACATTCGAGAAAATTAAGGTACTATAGTGCTCAGTTTTTGCAGTGCTTCATCATGTTTCCATTACTTCAGCTAATACTTGTAAAGCTTTCAAGTTTTCTGAAAGATTTTGAGATTCTTATCAGGGAAAAGTTTTGGATCTTTCAATCACTTCTGTTTTAGGAAGAAATTTTGTTGCCTTCTGTTGAAACATTCCAACTGGAATCACTCCCTGATTTGTTTATAAGTGAAGCTGGCTAGCTAGGTCGAGACATCGGGTCACTCCCCTTATGATTATACAATGTATGAACTAGGATCGTCAATTAATCTTTAATAGAGATCTATCGCAACTGTCGGGTCT

Coding sequence (CDS)

ATGGCCTCGACTTCTTTTGCTGGCAGGAAGCAACTGCCAGTGATTGAAGCTACTTCTAGCTGTATACCATACCCACCACCGCAGACAACATATGAGGATATTGTAGCTAATCCAAATATCTTTATGGCATCCTTGGAGAAGCTCCATTCTGTCATGGGAACCAAGTTCATGATCCCGATTATTGGTGGGAAAGAACTAGACCTGCATCGACTTTTCGTGGAAGTTACTTCTCGTGGTGGCATTGAGAAGGTTATAAGAGAAAGAAGATGGAAAGAAGTAACTTCAGTTTTCAATTTTCCATCAACGGCCACCAATGCGTCTTTCGTTCTGAGGAATGCAGCGTCGATTCCTACCCAAGGGACGGCCTCTATGTTGCCACCATCAGATAATCAGGCGGCGTCCCAGCCGCCACGGAGTACTGCAACTGAACTTCCAGCAGTTGCTCCGGGTTCGACATCTCCAGCAGGAGGGTTTCCAGTGATCGGAGTCATTGACGGGAAATTTGATAGCGGATATCTTATTACTGTTACTGTAGGGACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCTGAGCAACCTGCTCAGCCTGTTGGTGTTTTTGCCAAAGATGGTACACCAAATGCTCATCAGCATCGCCGTCGGAAGAAATCTGAGATAAGGCGAAGGGATCCCGGTCATCCGAAGCCAAATAGAAGCGGCTACAACTTCTTCTTTGCTGAGCAGCATGCTAGACTCAAACCATTACACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGACCTTTGGAATAAACTTAAAGAGTCTGAAAGAACAGTTTACCAGGAGAAAGCTATGAAAGATAAAGAACGATACAGAGTCGAGATGGAGGATTACAGAGAGAAGCTGAGGACAGGCCAAGTCATCAGTGATGCAGTGCCTTTACAGCAGCGTCTTCCCGAGCCAGACCTGAACATGGTCTATGCTGACAAGAACGAAGAAACGGAGGATGGCGACTCTCCACAAACCCCAGATAACGATACAAGCTATGTTGAAGGCAACTCTGGAGAGTATAAAATGGAAGTGAAGGAGGAGGACGAAGAGGAGGAAGAGGAGGACTCGGAAGAAGATGCATCTCCGAAAGGAATTGTTATTGTGGAGGATGTTAATGCTTTAGTCGAGGAGGAACAGTGCAAGACGGGAACAGCCGAAGAGGATGTTAGAAAAGAGAGTAGCACGGTTGGGGACGATAAAGAAGTTTACGCTGGGGAGTCGGTAATGATGGAGGTGGATGCAAAGGAAGAACCAGAACCAACAACAGACATTCGAGAAAATTAA

Protein sequence

MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRNAASIPTQGTASMLPPSDNQAASQPPRSTATELPAVAPGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDGTPNAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEDGDSPQTPDNDTSYVEGNSGEYKMEVKEEDEEEEEEDSEEDASPKGIVIVEDVNALVEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN
Homology
[Close]
BLAST of Carg10147 vs. NCBI nr
Match: XP_023547408.1 (high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547409.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547410.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547411.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547412.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547414.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547415.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547416.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547417.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547418.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547419.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547420.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547421.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547422.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547423.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547424.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547425.1 high mobility group B protein 15 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 793.1 bits (2047), Expect = 4.8e-226
Identity = 436/473 (92.18%), Postives = 439/473 (92.81%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI
Sbjct: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------- 120
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR         
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 120

Query: 121 -----------------------NAASIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180
                                  +AA+IPTQGTASMLPPSDNQAASQPPRSTATELPAVA
Sbjct: 121 FEQIYFFKAVGWTPIISDSSPCPSAATIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180

Query: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDGTP 240
           PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDGTP
Sbjct: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDGTP 240

Query: 241 NAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNK 300
           NAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNK
Sbjct: 241 NAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNK 300

Query: 301 LKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKN 360
           LKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKN
Sbjct: 301 LKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKN 360

Query: 361 EETEDGDSPQTPDNDTSYVEGNSGEYKMEXXXXXXXXXXXXXXXXXXPKGIVIVEDVNAL 420
           +ETEDGDSPQTPDNDTSYVEGNSGEYKM XXXXXXXXXXXXXXXXXXPKGI IVEDVNAL
Sbjct: 361 QETEDGDSPQTPDNDTSYVEGNSGEYKMXXXXXXXXXXXXXXXXXXXPKGIGIVEDVNAL 420

Query: 421 VEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN 442
           VEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN
Sbjct: 421 VEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN 473

[Close]
BLAST of Carg10147 vs. NCBI nr
Match: XP_022959291.1 (high mobility group B protein 15 [Cucurbita moschata] >XP_022959292.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959293.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959294.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959295.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959296.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959297.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959298.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959299.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959300.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959301.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959302.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959303.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959304.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959305.1 high mobility group B protein 15 [Cucurbita moschata] >XP_022959306.1 high mobility group B protein 15 [Cucurbita moschata])

HSP 1 Score: 789.6 bits (2038), Expect = 5.3e-225
Identity = 435/473 (91.97%), Postives = 437/473 (92.39%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI
Sbjct: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------- 120
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR         
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 120

Query: 121 -----------------------NAASIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180
                                  +AA+IPTQGTASMLPPSDNQAASQPPRSTATELPAVA
Sbjct: 121 FEQIYFFKAVGWTPIISDSSPCPSAATIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180

Query: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDGTP 240
           PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDGTP
Sbjct: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDGTP 240

Query: 241 NAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNK 300
           NAHQ RRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNK
Sbjct: 241 NAHQLRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNK 300

Query: 301 LKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKN 360
           LKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKN
Sbjct: 301 LKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKN 360

Query: 361 EETEDGDSPQTPDNDTSYVEGNSGEYKMEXXXXXXXXXXXXXXXXXXPKGIVIVEDVNAL 420
           EETEDGDSPQTPDNDTSYVEGNSGEYKME XXXXXXXXXXXXXXXXX  GIVIVEDVNAL
Sbjct: 361 EETEDGDSPQTPDNDTSYVEGNSGEYKMEVXXXXXXXXXXXXXXXXXXXGIVIVEDVNAL 420

Query: 421 VEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN 442
           VEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN
Sbjct: 421 VEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN 473

[Close]
BLAST of Carg10147 vs. NCBI nr
Match: XP_023006335.1 (high mobility group B protein 15-like [Cucurbita maxima] >XP_023006336.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006337.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006338.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006339.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006340.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006341.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006342.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006343.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006345.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006346.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006347.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006348.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006349.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006350.1 high mobility group B protein 15-like [Cucurbita maxima] >XP_023006351.1 high mobility group B protein 15-like [Cucurbita maxima])

HSP 1 Score: 775.8 bits (2002), Expect = 7.9e-221
Identity = 430/473 (90.91%), Postives = 434/473 (91.75%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI
Sbjct: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------- 120
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR         
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 120

Query: 121 -----------------------NAASIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180
                                  +AA+IPTQGTASMLPPSDNQAASQPPRSTATELPAVA
Sbjct: 121 FEQIYFFKAVGWTPIISDSSLCPSAATIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180

Query: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDGTP 240
           PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQA SEQP QPVGVFAKDGTP
Sbjct: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQASSEQPTQPVGVFAKDGTP 240

Query: 241 NAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNK 300
           NAHQHRRRKK EI+RRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNK
Sbjct: 241 NAHQHRRRKKYEIKRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNK 300

Query: 301 LKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKN 360
           LKESER VYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKN
Sbjct: 301 LKESERIVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKN 360

Query: 361 EETEDGDSPQTPDNDTSYVEGNSGEYKMEXXXXXXXXXXXXXXXXXXPKGIVIVEDVNAL 420
           EETEDG+SPQTPDNDTSYVEGNSGEYKM XXXXXXXXXXXXXXXXXXPKGI IV DVNAL
Sbjct: 361 EETEDGESPQTPDNDTSYVEGNSGEYKMXXXXXXXXXXXXXXXXXXXPKGIGIV-DVNAL 420

Query: 421 VEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN 442
           VEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN
Sbjct: 421 VEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTTDIREN 472

[Close]
BLAST of Carg10147 vs. NCBI nr
Match: XP_011649098.1 (PREDICTED: high mobility group B protein 15 isoform X6 [Cucumis sativus] >XP_011649099.1 PREDICTED: high mobility group B protein 15 isoform X6 [Cucumis sativus] >XP_004139006.2 PREDICTED: high mobility group B protein 15 isoform X6 [Cucumis sativus] >XP_011649100.1 PREDICTED: high mobility group B protein 15 isoform X6 [Cucumis sativus] >XP_011649101.1 PREDICTED: high mobility group B protein 15 isoform X6 [Cucumis sativus] >KGN61472.1 hypothetical protein Csa_2G138760 [Cucumis sativus])

HSP 1 Score: 637.9 bits (1644), Expect = 2.6e-179
Identity = 373/482 (77.39%), Postives = 398/482 (82.57%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MASTSFAG KQLPVIE  S+C+PYPPPQTTYEDI+AN  IFM +LEKLHS+MGTKFMIPI
Sbjct: 19  MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 78

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------- 120
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR         
Sbjct: 79  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 138

Query: 121 -----------------------NAASIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180
                                  +A++IPTQG  SMLPPSDNQAAS  P+STATELPAV+
Sbjct: 139 FEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDNQAASHQPQSTATELPAVS 198

Query: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPA-----QPVGVFA 240
           P STSP GGFPVIGVIDGKFDSGYL+TVTVGTEKLKGVLYQAP EQP+     QPVG FA
Sbjct: 199 PSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAFA 258

Query: 241 KDG----TPNAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS 300
           KDG    TPNAH       SEI+RRDP HPKPNRSGYNFFFAEQHARLKPL+PGKDREIS
Sbjct: 259 KDGSTPTTPNAHXXXXXXXSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREIS 318

Query: 301 RMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPD 360
           RMIGDLWNKLKESERTVYQEKAMKDKERYR+EM DYREKLRTGQ+ISDAVPLQQRLPEPD
Sbjct: 319 RMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPD 378

Query: 361 LNMVYADKNEETEDGDSPQTPDNDTSYVEGNSGEYK----MEXXXXXXXXXXXXXXXXXX 420
           LNMVY DKNEETE G+S QTPD+DTSYVEG+SGEYK      XXXXXXXXXXXXXXXXXX
Sbjct: 379 LNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTXXXXXXXXXXXXXXXXXXXXXXX 438

Query: 421 PKGIVIVEDVNALVEEEQCKT-GTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEP 437
           P+GI  V DVN LVEEEQC+T  T  E+VRKESSTVGD KEV AG+SVM+EV+AKE PEP
Sbjct: 439 PQGIGNV-DVNILVEEEQCETRTTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEVPEP 497

[Close]
BLAST of Carg10147 vs. NCBI nr
Match: XP_011649090.1 (PREDICTED: high mobility group B protein 15 isoform X1 [Cucumis sativus])

HSP 1 Score: 637.9 bits (1644), Expect = 2.6e-179
Identity = 373/482 (77.39%), Postives = 398/482 (82.57%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MASTSFAG KQLPVIE  S+C+PYPPPQTTYEDI+AN  IFM +LEKLHS+MGTKFMIPI
Sbjct: 89  MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 148

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------- 120
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR         
Sbjct: 149 IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 208

Query: 121 -----------------------NAASIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180
                                  +A++IPTQG  SMLPPSDNQAAS  P+STATELPAV+
Sbjct: 209 FEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDNQAASHQPQSTATELPAVS 268

Query: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPA-----QPVGVFA 240
           P STSP GGFPVIGVIDGKFDSGYL+TVTVGTEKLKGVLYQAP EQP+     QPVG FA
Sbjct: 269 PSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAFA 328

Query: 241 KDG----TPNAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS 300
           KDG    TPNAH       SEI+RRDP HPKPNRSGYNFFFAEQHARLKPL+PGKDREIS
Sbjct: 329 KDGSTPTTPNAHXXXXXXXSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREIS 388

Query: 301 RMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPD 360
           RMIGDLWNKLKESERTVYQEKAMKDKERYR+EM DYREKLRTGQ+ISDAVPLQQRLPEPD
Sbjct: 389 RMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPD 448

Query: 361 LNMVYADKNEETEDGDSPQTPDNDTSYVEGNSGEYK----MEXXXXXXXXXXXXXXXXXX 420
           LNMVY DKNEETE G+S QTPD+DTSYVEG+SGEYK      XXXXXXXXXXXXXXXXXX
Sbjct: 449 LNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTXXXXXXXXXXXXXXXXXXXXXXX 508

Query: 421 PKGIVIVEDVNALVEEEQCKT-GTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEP 437
           P+GI  V DVN LVEEEQC+T  T  E+VRKESSTVGD KEV AG+SVM+EV+AKE PEP
Sbjct: 509 PQGIGNV-DVNILVEEEQCETRTTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEVPEP 567

[Close]
BLAST of Carg10147 vs. TAIR10
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 328.2 bits (840), Expect = 7.9e-90
Identity = 191/366 (52.19%), Postives = 237/366 (64.75%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MAS+S   +  +P+    + C+    P+ TYE +VA+P +FM SLE+LHS++GTKFM+PI
Sbjct: 1   MASSSCLKQGSVPM---NNVCV---TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPI 60

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------N 120
           IGG++LDLH+LFVEVTSRGGI K++ ERRWKEVT+ F FP TATNAS+VLR        N
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNN 120

Query: 121 AASIPTQGTASMLPPSDNQAASQPP--------------RSTATELPAV--APGSTSPAG 180
              I    +   +PP   Q+ S  P                T T  P +  A        
Sbjct: 121 YEQIYFFRSNGQIPPDSMQSPSARPCFIQGAIRPSQELQALTFTPQPKINTAEFLGGSLA 180

Query: 181 GFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQ------APSEQPAQPVGVFAKDGTPNA 240
           G  V+GVIDGKF+SGYL+TVT+G+E+LKGVLYQ         + P Q  GV       +A
Sbjct: 181 GSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISA 240

Query: 241 HQH----------RRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISR 300
           +                   I+RRDP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISR
Sbjct: 241 NPQGVAGGVTXXXXXXXXXXIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISR 300

Query: 301 MIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDL 327
           MIG+LWNKL E E+ +YQ KAM+DKERYR EMEDYREK + GQ+IS+AVPLQQRLPE ++
Sbjct: 301 MIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNV 360

[Close]
BLAST of Carg10147 vs. TAIR10
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 221.9 bits (564), Expect = 8.0e-58
Identity = 123/280 (43.93%), Postives = 170/280 (60.71%), Query Frame = 0 

Query: 31  YEDIVANPNIFMASLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 90
           Y+D+V N  +F   L     +      +P +GG  LDLHRLF+EVTSRGGIE+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 91  KEVTSVFNFPSTATNASFVLRN---AASIPTQGTASM-LPPSDNQAASQPPRSTATELPA 150
           KEV   F+FP+T T+ASFVLR          +    +  P S  Q+  +  +S A E P 
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEALKSLANESPN 155

Query: 151 VAPGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDG 210
              G   P  G+ V G IDGKFDSGYL+T+ +G+++LKGVLY  P         +     
Sbjct: 156 PEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQSQQTMETPSA 215

Query: 211 TPNAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLW 270
              + Q R RKKS++   D   PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W
Sbjct: 216 IVQSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMW 275

Query: 271 NKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVIS 307
           + L ESE+ VYQ+K +KD ERYR+EM +Y+    +G   S
Sbjct: 276 SNLTESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATAS 315

[Close]
BLAST of Carg10147 vs. TAIR10
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-55
Identity = 127/300 (42.33%), Postives = 173/300 (57.67%), Query Frame = 0 

Query: 24  YPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK 83
           YP P   +E +V + ++F  +L + HS+M TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 84  VIRERRWKEVTSVFNFPSTATNASFVLR----------NAASIPTQGTASMLPPSD---N 143
           V+ E++W+EV  VF F +T T+ASFVLR              + T     + P +    N
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATFHAN 146

Query: 144 QAASQPPRSTATELPAVAPGSTSP----AGGFPVIGVIDGKFDSGYLITVTVGTEKLKGV 203
            + S+         P++   +T P    +  F  IG I+GKFD GYL+ V +G+E L GV
Sbjct: 147 PSTSKEMALVEYTPPSIRYHNTHPPSQGSSSFTAIGTIEGKFDCGYLVKVKLGSEILNGV 206

Query: 204 LYQAPSEQP-AQPVGVFAKDGTPNAHQHR-----RRKKSEIRRRDPGHPKPNRSGYNFFF 263
           LY +    P + P  V      P     R               DP +PKPNRSGYNFFF
Sbjct: 207 LYHSAQPGPSSSPTAVLNNAVVPYVETGRXXXXXXXXXXXXXXXDPNYPKPNRSGYNFFF 266

Query: 264 AEQHARLKPLHPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLR 301
           AE+H +LK L+P K+RE +++IG+ W+ L   ER VYQ+  +KDKERY+ E+ +YRE LR
Sbjct: 267 AEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLR 326

[Close]
BLAST of Carg10147 vs. TAIR10
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 175.3 bits (443), Expect = 8.6e-44
Identity = 114/283 (40.28%), Postives = 152/283 (53.71%), Query Frame = 0 

Query: 31  YEDIVANPNIFMASLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 90
           Y+DIV NP +F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 91  KEVTSVFNFPSTATNASFVLRNAASIPTQGTASMLPPSDNQAASQPPRSTATELPAVA-- 150
           KEV   FNF +T TN++FVLR       +    ML   ++    Q P ST  E       
Sbjct: 90  KEVIDAFNFKTTITNSAFVLR-------KSYLKMLFEFEHLYYFQAPLSTFWEKEKALKL 149

Query: 151 ---------PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPV 210
                      S     G  + G+IDGKF+SGYLI+  VG+EKLKG+LY    E      
Sbjct: 150 LIEKSANRDKDSQELKPGTVITGIIDGKFESGYLISTKVGSEKLKGMLYHISPE------ 209

Query: 211 GVFAKDGTPNAHQHRRRKKSEIRRRDPGH-PKPNRSGYNFFFAEQHARLKPLHPGKDREI 270
                         R +KK++  + D    PK  R+GYNFF AEQ  R+K  + G+    
Sbjct: 210 ------------TKRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAGQKVSS 269

Query: 271 SRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRT 302
            +  G++W  L ES+R VY EK+ +D +RY++E+  YR  + +
Sbjct: 270 PKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYRSLMES 287

[Close]
BLAST of Carg10147 vs. TAIR10
Match: AT3G28730.1 (high mobility group)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06
Identity = 25/72 (34.72%), Postives = 41/72 (56.94%), Query Frame = 0 

Query: 226 PGHPKPNRSGYNFFFAEQHARLKPLHPG-KDREISRMIGDLWNKLKESERTVYQEKAMKD 285
           P  PK   SG+ FF   +   +K  HPG    E+ +++GD W ++   ++  Y+ KA  D
Sbjct: 559 PNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVD 618

Query: 286 KERYRVEMEDYR 297
           K+RY+ E+ DY+
Sbjct: 619 KQRYKDEISDYK 630

[Close]
BLAST of Carg10147 vs. Swiss-Prot
Match: sp|Q9MAT6|HMG15_ARATH (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.4e-88
Identity = 191/366 (52.19%), Postives = 237/366 (64.75%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MAS+S   +  +P+    + C+    P+ TYE +VA+P +FM SLE+LHS++GTKFM+PI
Sbjct: 1   MASSSCLKQGSVPM---NNVCV---TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPI 60

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------N 120
           IGG++LDLH+LFVEVTSRGGI K++ ERRWKEVT+ F FP TATNAS+VLR        N
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNN 120

Query: 121 AASIPTQGTASMLPPSDNQAASQPP--------------RSTATELPAV--APGSTSPAG 180
              I    +   +PP   Q+ S  P                T T  P +  A        
Sbjct: 121 YEQIYFFRSNGQIPPDSMQSPSARPCFIQGAIRPSQELQALTFTPQPKINTAEFLGGSLA 180

Query: 181 GFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQ------APSEQPAQPVGVFAKDGTPNA 240
           G  V+GVIDGKF+SGYL+TVT+G+E+LKGVLYQ         + P Q  GV       +A
Sbjct: 181 GSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISA 240

Query: 241 HQH----------RRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISR 300
           +                   I+RRDP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISR
Sbjct: 241 NPQGVAGGVTXXXXXXXXXXIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISR 300

Query: 301 MIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPDL 327
           MIG+LWNKL E E+ +YQ KAM+DKERYR EMEDYREK + GQ+IS+AVPLQQRLPE ++
Sbjct: 301 MIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNV 360

[Close]
BLAST of Carg10147 vs. Swiss-Prot
Match: sp|Q9LTT3|HMG10_ARATH (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.4e-56
Identity = 123/280 (43.93%), Postives = 170/280 (60.71%), Query Frame = 0 

Query: 31  YEDIVANPNIFMASLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 90
           Y+D+V N  +F   L     +      +P +GG  LDLHRLF+EVTSRGGIE+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 91  KEVTSVFNFPSTATNASFVLRN---AASIPTQGTASM-LPPSDNQAASQPPRSTATELPA 150
           KEV   F+FP+T T+ASFVLR          +    +  P S  Q+  +  +S A E P 
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEALKSLANESPN 155

Query: 151 VAPGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPVGVFAKDG 210
              G   P  G+ V G IDGKFDSGYL+T+ +G+++LKGVLY  P         +     
Sbjct: 156 PEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQSQQTMETPSA 215

Query: 211 TPNAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLW 270
              + Q R RKKS++   D   PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W
Sbjct: 216 IVQSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMW 275

Query: 271 NKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVIS 307
           + L ESE+ VYQ+K +KD ERYR+EM +Y+    +G   S
Sbjct: 276 SNLTESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATAS 315

[Close]
BLAST of Carg10147 vs. Swiss-Prot
Match: sp|Q9SGS2|HMGB9_ARATH (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.3e-54
Identity = 127/300 (42.33%), Postives = 173/300 (57.67%), Query Frame = 0 

Query: 24  YPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK 83
           YP P   +E +V + ++F  +L + HS+M TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 84  VIRERRWKEVTSVFNFPSTATNASFVLR----------NAASIPTQGTASMLPPSD---N 143
           V+ E++W+EV  VF F +T T+ASFVLR              + T     + P +    N
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATFHAN 146

Query: 144 QAASQPPRSTATELPAVAPGSTSP----AGGFPVIGVIDGKFDSGYLITVTVGTEKLKGV 203
            + S+         P++   +T P    +  F  IG I+GKFD GYL+ V +G+E L GV
Sbjct: 147 PSTSKEMALVEYTPPSIRYHNTHPPSQGSSSFTAIGTIEGKFDCGYLVKVKLGSEILNGV 206

Query: 204 LYQAPSEQP-AQPVGVFAKDGTPNAHQHR-----RRKKSEIRRRDPGHPKPNRSGYNFFF 263
           LY +    P + P  V      P     R               DP +PKPNRSGYNFFF
Sbjct: 207 LYHSAQPGPSSSPTAVLNNAVVPYVETGRXXXXXXXXXXXXXXXDPNYPKPNRSGYNFFF 266

Query: 264 AEQHARLKPLHPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLR 301
           AE+H +LK L+P K+RE +++IG+ W+ L   ER VYQ+  +KDKERY+ E+ +YRE LR
Sbjct: 267 AEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLR 326

[Close]
BLAST of Carg10147 vs. Swiss-Prot
Match: sp|Q9LG02|HMG11_ARATH (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 175.3 bits (443), Expect = 1.5e-42
Identity = 114/283 (40.28%), Postives = 152/283 (53.71%), Query Frame = 0 

Query: 31  YEDIVANPNIFMASLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 90
           Y+DIV NP +F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 91  KEVTSVFNFPSTATNASFVLRNAASIPTQGTASMLPPSDNQAASQPPRSTATELPAVA-- 150
           KEV   FNF +T TN++FVLR       +    ML   ++    Q P ST  E       
Sbjct: 90  KEVIDAFNFKTTITNSAFVLR-------KSYLKMLFEFEHLYYFQAPLSTFWEKEKALKL 149

Query: 151 ---------PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPAQPV 210
                      S     G  + G+IDGKF+SGYLI+  VG+EKLKG+LY    E      
Sbjct: 150 LIEKSANRDKDSQELKPGTVITGIIDGKFESGYLISTKVGSEKLKGMLYHISPE------ 209

Query: 211 GVFAKDGTPNAHQHRRRKKSEIRRRDPGH-PKPNRSGYNFFFAEQHARLKPLHPGKDREI 270
                         R +KK++  + D    PK  R+GYNFF AEQ  R+K  + G+    
Sbjct: 210 ------------TKRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAGQKVSS 269

Query: 271 SRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRT 302
            +  G++W  L ES+R VY EK+ +D +RY++E+  YR  + +
Sbjct: 270 PKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEILQYRSLMES 287

[Close]
BLAST of Carg10147 vs. Swiss-Prot
Match: sp|Q68CP9|ARID2_HUMAN (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 9.2e-11
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0 

Query: 41  FMASLEKLHSVMGTKF-MIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNF 100
           F+  L + H   G+ F  IP +GGKELDLH L+  VT+ GG  KV  + +W E+   FNF
Sbjct: 19  FLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNF 78

Query: 101 PSTATNASFVLR 112
           P + +NA+F L+
Sbjct: 79  PRSCSNAAFALK 90

[Close]
BLAST of Carg10147 vs. TrEMBL
Match: tr|A0A0A0LL59|A0A0A0LL59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 1.7e-179
Identity = 373/482 (77.39%), Postives = 398/482 (82.57%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MASTSFAG KQLPVIE  S+C+PYPPPQTTYEDI+AN  IFM +LEKLHS+MGTKFMIPI
Sbjct: 19  MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 78

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------- 120
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR         
Sbjct: 79  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 138

Query: 121 -----------------------NAASIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180
                                  +A++IPTQG  SMLPPSDNQAAS  P+STATELPAV+
Sbjct: 139 FEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDNQAASHQPQSTATELPAVS 198

Query: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPA-----QPVGVFA 240
           P STSP GGFPVIGVIDGKFDSGYL+TVTVGTEKLKGVLYQAP EQP+     QPVG FA
Sbjct: 199 PSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAFA 258

Query: 241 KDG----TPNAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS 300
           KDG    TPNAH       SEI+RRDP HPKPNRSGYNFFFAEQHARLKPL+PGKDREIS
Sbjct: 259 KDGSTPTTPNAHXXXXXXXSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREIS 318

Query: 301 RMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPD 360
           RMIGDLWNKLKESERTVYQEKAMKDKERYR+EM DYREKLRTGQ+ISDAVPLQQRLPEPD
Sbjct: 319 RMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPD 378

Query: 361 LNMVYADKNEETEDGDSPQTPDNDTSYVEGNSGEYK----MEXXXXXXXXXXXXXXXXXX 420
           LNMVY DKNEETE G+S QTPD+DTSYVEG+SGEYK      XXXXXXXXXXXXXXXXXX
Sbjct: 379 LNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTXXXXXXXXXXXXXXXXXXXXXXX 438

Query: 421 PKGIVIVEDVNALVEEEQCKT-GTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEP 437
           P+GI  V DVN LVEEEQC+T  T  E+VRKESSTVGD KEV AG+SVM+EV+AKE PEP
Sbjct: 439 PQGIGNV-DVNILVEEEQCETRTTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEVPEP 497

[Close]
BLAST of Carg10147 vs. TrEMBL
Match: tr|A0A1S3C575|A0A1S3C575_CUCME (high mobility group B protein 15 OS=Cucumis melo OX=3656 GN=LOC103497004 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 5.0e-147
Identity = 338/489 (69.12%), Postives = 365/489 (74.64%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLE-KLHSVMGTKFMIP 60
           MASTSFAG KQLPVIE  S+C+PYPPPQTT     A P   +A +    H        + 
Sbjct: 1   MASTSFAGGKQLPVIEVASNCVPYPPPQTT-----ALPKAVIAVIAVAAHQGFSLHLRVH 60

Query: 61  IIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR-------- 120
           II   +         VT    I +VIRERRWKEVTSVFNFPSTATNASFVLR        
Sbjct: 61  IIPEHD--------HVTIL--ILQVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLH 120

Query: 121 ------------------------NAASIPTQGTASMLPPSDNQAASQPPRSTATELPAV 180
                                   +A++IPTQG  SMLPPSDNQAAS  PRS ATELPAV
Sbjct: 121 HFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDNQAASHQPRSIATELPAV 180

Query: 181 APGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPA-----QPVGVF 240
           +  STSPAGGFPVIGVIDGKFDSGYL+TVTVGTEKLKGVLYQAP EQP+     QPVG F
Sbjct: 181 SLSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAF 240

Query: 241 AKDG----TPNAHQHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREI 300
           AKDG    TPNAH       SEI+RRDP HPKPNRSGYNFFFAEQHARLKPL+PGKDREI
Sbjct: 241 AKDGSTPTTPNAHXXXXXXXSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREI 300

Query: 301 SRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEP 360
           SRMIGDLWNKLKESERTVYQEKAMKDKERYR+EM DYREKLRTGQ+ISDAVPLQQRLPEP
Sbjct: 301 SRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEP 360

Query: 361 DLNMVYADKNEETEDGDSPQTPDNDTSYVEGNSGEYK-----MEXXXXXXXXXXXXXXXX 420
           DLNMVY DKNEETE G+S QTPD+DTSYVEG+SGEYK       XXXXXXXXXXXXXXXX
Sbjct: 361 DLNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXPKGIVIVEDVNALVEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPE 442
           XX +GI  V DVN LVEEEQC+T T  E+VRKESSTVGD KEV AG+SVM+EV+AKEEPE
Sbjct: 421 XXXQGIGNV-DVNILVEEEQCETRTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEEPE 471

[Close]
BLAST of Carg10147 vs. TrEMBL
Match: tr|A0A061ELP2|A0A061ELP2_THECC (HMG box protein with ARID/BRIGHT DNA-binding domain isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_020322 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.0e-124
Identity = 257/394 (65.23%), Postives = 293/394 (74.37%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MASTSFA +  L + E  S+  PYPPP   YED+ ANP +FMA+LEKLH+ MGTKFMIPI
Sbjct: 1   MASTSFAKQSLLAMKEPASNYNPYPPPLARYEDVAANPKLFMATLEKLHATMGTKFMIPI 60

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------- 120
           IGGKELDLHRLFVEVT+RGGIEK+I ERRWKEVT++FNFPSTATNASFVLR         
Sbjct: 61  IGGKELDLHRLFVEVTARGGIEKIISERRWKEVTAIFNFPSTATNASFVLRKYYVSLLHH 120

Query: 121 -----------------------NAASIPTQGTASMLPPS--DNQAASQPPRSTATELPA 180
                                  + A  PTQGT   + PS   + AA Q PR    ELPA
Sbjct: 121 YEQIYFFKAGGWIPVSSDRYQNPSIAYNPTQGT---VRPSIEIHAAAVQQPRVNIAELPA 180

Query: 181 VAPGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAP---SEQPAQPVGVFA 240
             P S   A G PVIGVIDGKF+SGYL+TVT+G+EKLKGVLYQAP   + Q ++  G+FA
Sbjct: 181 ARPAS---AAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQGAAPQISKQYGIFA 240

Query: 241 KDGTPNAH------QHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 300
              + NAH      + RRRKKSEI+RRDP HPKPNRSGYNFFFAEQHARLKPLHPGKDRE
Sbjct: 241 SK-SDNAHPSLGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 300

Query: 301 ISRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPE 351
           ISRMIG+LWNKL E+E+ VYQEKA+KDKERYR+EMEDYRE+LRTGQVISDAVPLQQRLPE
Sbjct: 301 ISRMIGELWNKLNETEKVVYQEKALKDKERYRIEMEDYRERLRTGQVISDAVPLQQRLPE 360

[Close]
BLAST of Carg10147 vs. TrEMBL
Match: tr|A0A061EKA6|A0A061EKA6_THECC (HMG box protein with ARID/BRIGHT DNA-binding domain isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_020322 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 256/394 (64.97%), Postives = 293/394 (74.37%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MASTSFA +  L + E  S+  PYPPP   YED+ ANP +FMA+LEKLH+ MGTKFMIPI
Sbjct: 1   MASTSFAKQSLLAMKEPASNYNPYPPPLARYEDVAANPKLFMATLEKLHATMGTKFMIPI 60

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------- 120
           IGGKELDLHRLFVEVT+RGGIEK+I ERRWKEVT++FNFPSTATNASFVLR         
Sbjct: 61  IGGKELDLHRLFVEVTARGGIEKIISERRWKEVTAIFNFPSTATNASFVLRKYYVSLLHH 120

Query: 121 -----------------------NAASIPTQGTASMLPPS--DNQAASQPPRSTATELPA 180
                                  + A  PTQGT   + PS   + AA Q PR    ELPA
Sbjct: 121 YEQIYFFKAGGWIPVSSDRYQNPSIAYNPTQGT---VRPSIEIHAAAVQQPRVNIAELPA 180

Query: 181 VAPGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAP---SEQPAQPVGVFA 240
            A    + A G PVIGVIDGKF+SGYL+TVT+G+EKLKGVLYQAP   + Q ++  G+FA
Sbjct: 181 AA--RPASAAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQGAAPQISKQYGIFA 240

Query: 241 KDGTPNAH------QHRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 300
              + NAH      + RRRKKSEI+RRDP HPKPNRSGYNFFFAEQHARLKPLHPGKDRE
Sbjct: 241 SK-SDNAHPSLGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 300

Query: 301 ISRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPE 351
           ISRMIG+LWNKL E+E+ VYQEKA+KDKERYR+EMEDYRE+LRTGQVISDAVPLQQRLPE
Sbjct: 301 ISRMIGELWNKLNETEKVVYQEKALKDKERYRIEMEDYRERLRTGQVISDAVPLQQRLPE 360

[Close]
BLAST of Carg10147 vs. TrEMBL
Match: tr|A0A1R3JDX3|A0A1R3JDX3_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_06676 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 8.3e-118
Identity = 246/401 (61.35%), Postives = 290/401 (72.32%), Query Frame = 0 

Query: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60
           MASTSFA +  +P+ E  S+  PYPPP   YED+VA+P +F++SLE+LHS MGTKFMIPI
Sbjct: 1   MASTSFAKQSPVPLKEPASNYNPYPPPTARYEDVVASPKLFVSSLEQLHSTMGTKFMIPI 60

Query: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLR--------- 120
           IGGKELDLHRLFVEVTSRGGIEK+IRERRWKEVT++FNFPSTATNASFVLR         
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKIIRERRWKEVTAIFNFPSTATNASFVLRKYYGSLLHH 120

Query: 121 -----------------------NAASIPTQGTASMLPPSD-NQAASQPPRSTATELP-A 180
                                  +    PTQG  ++ P  D + AA Q PR   +ELP A
Sbjct: 121 YEQIYFFKAHGWVPASSESFQNPSITHSPTQG--AVRPSIDIHAAAVQQPRVNMSELPTA 180

Query: 181 VAPGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAP------SEQPAQPVG 240
             P ST+   G PV+GVIDGKF+SGYL+TVT+G+EKLKGVLYQAP      ++ P Q   
Sbjct: 181 TRPSSTA---GSPVVGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQGVATQTQVPQQQYN 240

Query: 241 VFA-KDGTPNAHQHRRRK----KSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKD 300
           +FA K   P+A    +R+     SEI+RRDP HPKPNRSGYNFFFAEQHARLKPLHPGKD
Sbjct: 241 LFASKTDNPHASMGVQRRXXXXXSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHPGKD 300

Query: 301 REISRMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRL 356
           REISRMIG+LWNKL E ++ +YQEKA+KDKERYR+EMEDYRE+ RTGQVISDAVPLQQR 
Sbjct: 301 REISRMIGELWNKLNEPDKAIYQEKALKDKERYRIEMEDYRERQRTGQVISDAVPLQQRH 360

The following BLAST results are available for this feature:
BLAST of Carg10147 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023547408.14.8e-22692.18high mobility group B protein 15 [Cucurbita pepo subsp. pepo] >XP_023547409.1 hi... [more]
XP_022959291.15.3e-22591.97high mobility group B protein 15 [Cucurbita moschata] >XP_022959292.1 high mobil... [more]
XP_023006335.17.9e-22190.91high mobility group B protein 15-like [Cucurbita maxima] >XP_023006336.1 high mo... [more]
XP_011649098.12.6e-17977.39PREDICTED: high mobility group B protein 15 isoform X6 [Cucumis sativus] >XP_011... [more]
XP_011649090.12.6e-17977.39PREDICTED: high mobility group B protein 15 isoform X1 [Cucumis sativus][more]
BLAST of Carg10147 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04880.17.9e-9052.19HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain[more]
AT3G13350.18.0e-5843.93HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain[more]
AT1G76110.11.3e-5542.33HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain[more]
AT1G55650.18.6e-4440.28HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain[more]
AT3G28730.11.1e-0634.72high mobility group[more]
BLAST of Carg10147 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9MAT6|HMG15_ARATH1.4e-8852.19High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 ... [more]
sp|Q9LTT3|HMG10_ARATH1.4e-5643.93High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 ... [more]
sp|Q9SGS2|HMGB9_ARATH2.3e-5442.33High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV... [more]
sp|Q9LG02|HMG11_ARATH1.5e-4240.28Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMG... [more]
sp|Q68CP9|ARID2_HUMAN9.2e-1144.44AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2... [more]
BLAST of Carg10147 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LL59|A0A0A0LL59_CUCSA1.7e-17977.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1[more]
tr|A0A1S3C575|A0A1S3C575_CUCME5.0e-14769.12high mobility group B protein 15 OS=Cucumis melo OX=3656 GN=LOC103497004 PE=4 SV... [more]
tr|A0A061ELP2|A0A061ELP2_THECC2.0e-12465.23HMG box protein with ARID/BRIGHT DNA-binding domain isoform 2 OS=Theobroma cacao... [more]
tr|A0A061EKA6|A0A061EKA6_THECC1.3e-12364.97HMG box protein with ARID/BRIGHT DNA-binding domain isoform 1 OS=Theobroma cacao... [more]
tr|A0A1R3JDX3|A0A1R3JDX3_COCAP8.3e-11861.35Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_06676 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR036910HMG_box_dom_sf
IPR036431ARID_dom_sf
IPR009071HMG_box_dom
IPR001606ARID_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10147-RACarg10147-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 278..298
NoneNo IPR availableSMARTSM01014ARID_2coord: 32..129
e-value: 2.2E-17
score: 73.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..415
NoneNo IPR availablePANTHERPTHR13711:SF250HIGH MOBILITY GROUP B PROTEIN 15coord: 13..366
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 13..366
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 229..293
e-value: 7.85021E-21
score: 84.9869
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 36..116
e-value: 3.4E-16
score: 69.8
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 41..112
e-value: 7.5E-14
score: 52.0
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 35..126
score: 19.939
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 228..297
e-value: 8.6E-20
score: 81.7
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 229..296
e-value: 4.9E-15
score: 55.6
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 229..296
score: 15.649
IPR036431ARID DNA-binding domain superfamilyGENE3DG3DSA:1.10.150.60coord: 29..113
e-value: 7.9E-20
score: 72.5
IPR036431ARID DNA-binding domain superfamilySUPERFAMILYSSF46774ARID-likecoord: 32..112
IPR036910High mobility group box domain superfamilyGENE3DG3DSA:1.10.30.10coord: 213..307
e-value: 4.1E-21
score: 77.2
IPR036910High mobility group box domain superfamilySUPERFAMILYSSF47095HMG-boxcoord: 222..301

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg10147CmaCh17G000950Cucurbita maxima (Rimu)carcmaB0314
Carg10147CmoCh17G000980Cucurbita moschata (Rifu)carcmoB0320
Carg10147Cp4.1LG12g00860Cucurbita pepo (Zucchini)carcpeB0322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg10147Cucurbita pepo (Zucchini)carcpeB0327
Carg10147Silver-seed gourdcarcarB266
Carg10147Silver-seed gourdcarcarB267
Carg10147Cucumber (Gy14) v2carcgybB0242
Carg10147Cucumber (Gy14) v2carcgybB0245
Carg10147Cucumber (Gy14) v1carcgyB0268
Carg10147Cucumber (Gy14) v1carcgyB0269
Carg10147Cucumber (Gy14) v1carcgyB0270
Carg10147Cucurbita maxima (Rimu)carcmaB0313
Carg10147Cucurbita maxima (Rimu)carcmaB0321
Carg10147Cucurbita moschata (Rifu)carcmoB0319
Carg10147Cucurbita moschata (Rifu)carcmoB0322
Carg10147Cucurbita moschata (Rifu)carcmoB0326
Carg10147Cucurbita pepo (Zucchini)carcpeB0323
Carg10147Cucurbita pepo (Zucchini)carcpeB0329
Carg10147Wild cucumber (PI 183967)carcpiB0258
Carg10147Wild cucumber (PI 183967)carcpiB0261
Carg10147Cucumber (Chinese Long) v2carcuB0253
Carg10147Cucumber (Chinese Long) v3carcucB0257
Carg10147Cucumber (Chinese Long) v3carcucB0260
Carg10147Bottle gourd (USVL1VR-Ls)carlsiB204
Carg10147Bottle gourd (USVL1VR-Ls)carlsiB206
Carg10147Melon (DHL92) v3.5.1carmeB0233
Carg10147Melon (DHL92) v3.5.1carmeB0236
Carg10147Melon (DHL92) v3.6.1carmedB0240
Carg10147Melon (DHL92) v3.6.1carmedB0243
Carg10147Watermelon (Charleston Gray)carwcgB0220
Carg10147Watermelon (Charleston Gray)carwcgB0221
Carg10147Watermelon (97103) v1carwmB0218
Carg10147Watermelon (97103) v1carwmB0219
Carg10147Watermelon (97103) v2carwmbB0229
Carg10147Watermelon (97103) v2carwmbB0230
Carg10147Wax gourdcarwgoB0282
Carg10147Wax gourdcarwgoB0285