Carg10081 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGAACGTCTATTTCTTACGAGTGTTTTTCGAGAAGTTCAAGCCACACATCCTCATTATTCTAACCGAATTTGGCTACACATTTTTGTATTTCTTTACGGATGCTTCCTTCAAGCATGGTATGAATCCTCACATCCACGTTACTTATCGACAAATCGTCGCTACCATCGCTTTGTTTCCCTTTGCTTATTTTCTCGAAAGGTACTGTGATTTTCATCTCGAATTCGTCTTTTTTATTCTAATTCATCAAAGAAAGAGAAAGAAACAAAAGATGGAATTTGAACATCTCCATCATTTGATCACATAAATCCTCATAACTTGAGGATTATCGTGAAATCCAACATCGGTTGAAGAGAAGAACGAAACATTCCTTATAATTGTGGGGAAACCTCTCTTTAATAGACGCATTAGAAAAAACTGTGAGGCTAACAATGATATGTAACGGGCCAAAACGGACAATATCTATTACAAATGGTATCAGAGTGAGCACAGGACACTAACTCCCAAGGAGGTGTGGATTGTGAGATCCCCACATAAGTTGGAGAGGAAAACGAAACATTTCTTATAAGAGTGTAGAAACCTCTCCCTAACAGACACGTTTTATAAAATCGTGAGATTGATGACGATACGTAACGGGTCAAAATAGATAATATCTATTAGCGATGGGCTTGGGCTGTATGAACATTTCTTTTATCCGTATGAACGTTTCTTTGGTTTATGTAGAAAATCAAGACCGAGGATCACGGTGGCATTATTCTTAGAGATTTTTGTTCTTTCACTTTTCGGGTAAGTTTCGATTAATGTCACACATTTAATTCATTCCGATATCTAAACGAAATGAAATTGCAGGTCGAGTTTGAGTCAAAACATGTACTACTCAAGCATGAGATACACATCTCCTACCTTCCTCTCATCAATGGTTAACACTATAGCTTGCTTGACATTCATAATTGCAGTGATGTTCAAGTTCAGTTCTTTAGATTTTCACGAACTTAAAAACTATTGA ATGATGAAGAACGTCTATTTCTTACGAGTGTTTTTCGAGAAGTTCAAGCCACACATCCTCATTATTCTAACCGAATTTGGCTACACATTTTTGTATTTCTTTACGGATGCTTCCTTCAAGCATGGTATGAATCCTCACATCCACGTTACTTATCGACAAATCGTCGCTACCATCGCTTTGTTTCCCTTTGCTTATTTTCTCGAAAGGTCGAGTTTGAGTCAAAACATGTACTACTCAAGCATGAGATACACATCTCCTACCTTCCTCTCATCAATGGTTAACACTATAGCTTGCTTGACATTCATAATTGCAGTGATGTTCAAGTTCAGTTCTTTAGATTTTCACGAACTTAAAAACTATTGA ATGATGAAGAACGTCTATTTCTTACGAGTGTTTTTCGAGAAGTTCAAGCCACACATCCTCATTATTCTAACCGAATTTGGCTACACATTTTTGTATTTCTTTACGGATGCTTCCTTCAAGCATGGTATGAATCCTCACATCCACGTTACTTATCGACAAATCGTCGCTACCATCGCTTTGTTTCCCTTTGCTTATTTTCTCGAAAGGTCGAGTTTGAGTCAAAACATGTACTACTCAAGCATGAGATACACATCTCCTACCTTCCTCTCATCAATGGTTAACACTATAGCTTGCTTGACATTCATAATTGCAGTGATGTTCAAGTTCAGTTCTTTAGATTTTCACGAACTTAAAAACTATTGA MMKNVYFLRVFFEKFKPHILIILTEFGYTFLYFFTDASFKHGMNPHIHVTYRQIVATIALFPFAYFLERSSLSQNMYYSSMRYTSPTFLSSMVNTIACLTFIIAVMFKFSSLDFHELKNY
BLAST of Carg10081 vs. NCBI nr
Match: XP_022958776.1 (WAT1-related protein At4g08300-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49 Identity = 104/113 (92.04%), Postives = 107/113 (94.69%), Query Frame = 0
BLAST of Carg10081 vs. NCBI nr
Match: XP_023548952.1 (WAT1-related protein At4g08300-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 199.9 bits (507), Expect = 4.9e-48 Identity = 107/134 (79.85%), Postives = 110/134 (82.09%), Query Frame = 0
BLAST of Carg10081 vs. NCBI nr
Match: XP_022958775.1 (WAT1-related protein At4g08300-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45 Identity = 104/134 (77.61%), Postives = 107/134 (79.85%), Query Frame = 0
BLAST of Carg10081 vs. NCBI nr
Match: XP_023006322.1 (WAT1-related protein At4g08300-like [Cucurbita maxima]) HSP 1 Score: 166.4 bits (420), Expect = 6.0e-38 Identity = 93/134 (69.40%), Postives = 95/134 (70.90%), Query Frame = 0
BLAST of Carg10081 vs. NCBI nr
Match: XP_004142259.1 (PREDICTED: WAT1-related protein At4g08300-like [Cucumis sativus]) HSP 1 Score: 153.7 bits (387), Expect = 4.0e-34 Identity = 81/138 (58.70%), Postives = 98/138 (71.01%), Query Frame = 0
BLAST of Carg10081 vs. TAIR10
Match: AT4G08300.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 85.9 bits (211), Expect = 1.9e-17 Identity = 50/128 (39.06%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of Carg10081 vs. TAIR10
Match: AT1G21890.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 81.3 bits (199), Expect = 4.6e-16 Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 0
BLAST of Carg10081 vs. TAIR10
Match: AT1G44800.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 78.2 bits (191), Expect = 3.9e-15 Identity = 42/126 (33.33%), Postives = 68/126 (53.97%), Query Frame = 0
BLAST of Carg10081 vs. TAIR10
Match: AT2G39510.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14 Identity = 41/124 (33.06%), Postives = 66/124 (53.23%), Query Frame = 0
BLAST of Carg10081 vs. TAIR10
Match: AT5G07050.1 (nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 75.5 bits (184), Expect = 2.5e-14 Identity = 44/137 (32.12%), Postives = 67/137 (48.91%), Query Frame = 0
BLAST of Carg10081 vs. Swiss-Prot
Match: sp|Q501F8|WTR32_ARATH (WAT1-related protein At4g08300 OS=Arabidopsis thaliana OX=3702 GN=At4g08300 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.4e-16 Identity = 50/128 (39.06%), Postives = 70/128 (54.69%), Query Frame = 0
BLAST of Carg10081 vs. Swiss-Prot
Match: sp|F4HZQ7|WTR5_ARATH (WAT1-related protein At1g21890 OS=Arabidopsis thaliana OX=3702 GN=At1g21890 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 8.3e-15 Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 0
BLAST of Carg10081 vs. Swiss-Prot
Match: sp|Q9LPF1|WTR8_ARATH (WAT1-related protein At1g44800 OS=Arabidopsis thaliana OX=3702 GN=At1g44800 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.0e-14 Identity = 42/126 (33.33%), Postives = 68/126 (53.97%), Query Frame = 0
BLAST of Carg10081 vs. Swiss-Prot
Match: sp|O80638|WTR14_ARATH (WAT1-related protein At2g39510 OS=Arabidopsis thaliana OX=3702 GN=At2g39510 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13 Identity = 41/124 (33.06%), Postives = 66/124 (53.23%), Query Frame = 0
BLAST of Carg10081 vs. Swiss-Prot
Match: sp|Q9FL41|WTR38_ARATH (WAT1-related protein At5g07050 OS=Arabidopsis thaliana OX=3702 GN=At5g07050 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.5e-13 Identity = 44/137 (32.12%), Postives = 67/137 (48.91%), Query Frame = 0
BLAST of Carg10081 vs. TrEMBL
Match: tr|A0A0A0LLJ5|A0A0A0LLJ5_CUCSA (WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_2G179220 PE=3 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.7e-34 Identity = 81/138 (58.70%), Postives = 98/138 (71.01%), Query Frame = 0
BLAST of Carg10081 vs. TrEMBL
Match: tr|A0A1S3CCF6|A0A1S3CCF6_CUCME (WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103499410 PE=3 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 7.7e-34 Identity = 79/139 (56.83%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of Carg10081 vs. TrEMBL
Match: tr|A0A0B0N241|A0A0B0N241_GOSAR (WAT1-related protein OS=Gossypium arboreum OX=29729 GN=F383_32425 PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.5e-32 Identity = 67/97 (69.07%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of Carg10081 vs. TrEMBL
Match: tr|A0A1U8A6Z1|A0A1U8A6Z1_NELNU (WAT1-related protein OS=Nelumbo nucifera OX=4432 GN=LOC104600851 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.2e-32 Identity = 68/102 (66.67%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of Carg10081 vs. TrEMBL
Match: tr|A0A2G5DPA1|A0A2G5DPA1_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01700704v1 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31 Identity = 67/107 (62.62%), Postives = 87/107 (81.31%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |