Carg10079 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10079
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	HR-like lesion-inducing protein-related
Location	Cucurbita_argyrosperma_scaffold_039 : 264451 .. 266247 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCCTGTTTTTCTTCTTCTTCTTCTTCTCCTTTTGTTTCGGTTTCGAAATCTCTGTCGGAATCGGAGCTGTTTTTGTGACGGAAATGGCTTTCGTTTCGTTTGTCGGAAGAGTTCTCTTCGTCTCGGTCTTCGTTCTCTCTGCTTGGCAAGAGTAAGCAACTCAGATCTACTCCATTTTGTTGCTTTTTCTTTTTACTATTCTGAGGTTTCTTCACTGGAAATTTGAATTTTCAGATGTAGGGTCACTTTCTAAATGTGTATTTGAAAACCCCTCATTTAGGGTTTTAGTTCATGAACCTTTTCAGTTATGTAATCATGGTAGATTCTGTTGTTTCTTCTTGTTATGAGCTCAGATCTGTGAGTGGAAATGATGGGAGTCTTTCTATTTTGTTTGAACTATGTGTTAGTTCTTGGAAAATTTGGACTCTGTTTGTTTCTCTCTGGAATGTTTCTGCAGGGGATGAACTGTTTTGGATCTTGATTTCATTTTTGTTCTTCAGATTCAATGATTTTGGTACCGATGGAGGAGCGGCGGCCAAGTATCTGAAGCCAAAATTCAACGTTTTCTCTCGCAATTTTGAATCTCATACTGGGTTGGATTTCCCCAAAGTTGAGGTGAGGAAATGCTCACGGTGTTTCTCATTGTTTCTCATGGCGATTGTTCTTTAAATTTCCATCCATTTTCAACAGATCCTACATGTTGTGGCTGGTGCCATTGCGCTGAAGGGCCTTGGAAGCCTGCTCTTCATCTTCAACAGCTCCATTGGAGCCTTTCTTCTGGTATGATATGATATCAAATTTTCAAAACCAATATTCATTCGTTTACCAAAGACAATTGAATTTGAATTGTTGAATGTTCTTGCTGGGTAGATCTTGCATCAGGCCATAACTGCACCGATCTTGTACGATTTCTACAACTACGACGTTGAGAAGAAGGAATTCAACCAACTTTTTGTGAAATTCACTCAGGTAATTGAACTAATGTAGCATGAATGATGAATCTGATTGTTTAGTGGCCTAACTACAGAAGCTTGAGATCATAGTTGTATCTTAATACAAGCTAAATTAAGAAAAAATGCGATAACTCGTGAATCTAAAGATACAAAATTGATTCAGGCTAAGATACGGAATGGATCATAAGGTTGTGTGGTTGATATTATGCAGAATCTGGCATTGTTGGGAGCGTTGCTGTTCTTCATCGGCATGAAGAATTCGTACCCGAGGAAGCAAGTCGCAAGGAAGAATCCGAAGTCGAAAACATCATAGATTATGAAGGAGAGGAGGGTTATGTTTATCTATTCTGTAGGACTCTTTTTGGAACTCTGAACACTCGTATGATCATTTCATTTTGTTGTTTTGGAGGCTGTGATATGCTTTGGTTACTCTTCTATGTTCTTGAGGTTGGAGGTTATGTGATTGTAATGAAAGTTCTATCACATAATTTTGAAGCGTCAATGTGTTTTGTTGTGTGATTGTAATGAATGGGATGGAAATGGGATGGAAATGGGAAGACTTGTCTTTAAAGGGAAGGAATAGGGGAGACATTGAAAGCCAAGTTATATACTTCGTCGGGTTCGGTTAAATTTTTGAAAAATTGAAAATTGGGTCCGTTGGTGAGTTGATATTTTTTTTTGTTGGGCAACTCGAAAATAGAGTTACAACCAACACTATCCTACTACCCTACTTTTTAAAATTATTATGTCAAGTCCATCGTTAATAGATATTGTTTGATTTGGCTCGTTACTTATTGCCGTTAGTCTCACGGTTTTTAAAATACGGTTGCTAGAGATAGGT

mRNA sequence

TTTCCCTGTTTTTCTTCTTCTTCTTCTTCTCCTTTTGTTTCGGTTTCGAAATCTCTGTCGGAATCGGAGCTGTTTTTGTGACGGAAATGGCTTTCGTTTCGTTTGTCGGAAGAGTTCTCTTCGTCTCGGTCTTCGTTCTCTCTGCTTGGCAAGAATTCAATGATTTTGGTACCGATGGAGGAGCGGCGGCCAAGTATCTGAAGCCAAAATTCAACGTTTTCTCTCGCAATTTTGAATCTCATACTGGGTTGGATTTCCCCAAAGTTGAGATCCTACATGTTGTGGCTGGTGCCATTGCGCTGAAGGGCCTTGGAAGCCTGCTCTTCATCTTCAACAGCTCCATTGGAGCCTTTCTTCTGATCTTGCATCAGGCCATAACTGCACCGATCTTGTACGATTTCTACAACTACGACGTTGAGAAGAAGGAATTCAACCAACTTTTTGTGAAATTCACTCAGAATCTGGCATTGTTGGGAGCGTTGCTGTTCTTCATCGGCATGAAGAATTCGTACCCGAGGAAGCAAGTCGCAAGGAAGAATCCGAAGTCGAAAACATCATAGATTATGAAGGAGAGGAGGGTTATGTTTATCTATTCTGTAGGACTCTTTTTGGAACTCTGAACACTCGTATGATCATTTCATTTTGTTGTTTTGGAGGCTGTGATATGCTTTGGTTACTCTTCTATGTTCTTGAGGTTGGAGGTTATGTGATTGTAATGAAAGTTCTATCACATAATTTTGAAGCGTCAATGTGTTTTGTTGTGTGATTGTAATGAATGGGATGGAAATGGGATGGAAATGGGAAGACTTGTCTTTAAAGGGAAGGAATAGGGGAGACATTGAAAGCCAAGTTATATACTTCGTCGGGTTCGGTTAAATTTTTGAAAAATTGAAAATTGGGTCCGTTGGTGAGTTGATATTTTTTTTTGTTGGGCAACTCGAAAATAGAGTTACAACCAACACTATCCTACTACCCTACTTTTTAAAATTATTATGTCAAGTCCATCGTTAATAGATATTGTTTGATTTGGCTCGTTACTTATTGCCGTTAGTCTCACGGTTTTTAAAATACGGTTGCTAGAGATAGGT

Coding sequence (CDS)

ATGGCTTTCGTTTCGTTTGTCGGAAGAGTTCTCTTCGTCTCGGTCTTCGTTCTCTCTGCTTGGCAAGAATTCAATGATTTTGGTACCGATGGAGGAGCGGCGGCCAAGTATCTGAAGCCAAAATTCAACGTTTTCTCTCGCAATTTTGAATCTCATACTGGGTTGGATTTCCCCAAAGTTGAGATCCTACATGTTGTGGCTGGTGCCATTGCGCTGAAGGGCCTTGGAAGCCTGCTCTTCATCTTCAACAGCTCCATTGGAGCCTTTCTTCTGATCTTGCATCAGGCCATAACTGCACCGATCTTGTACGATTTCTACAACTACGACGTTGAGAAGAAGGAATTCAACCAACTTTTTGTGAAATTCACTCAGAATCTGGCATTGTTGGGAGCGTTGCTGTTCTTCATCGGCATGAAGAATTCGTACCCGAGGAAGCAAGTCGCAAGGAAGAATCCGAAGTCGAAAACATCATAG

Protein sequence

MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKVEILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFVKFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS

Homology

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BLAST of Carg10079 vs. NCBI nr
Match: XP_022958788.1 (uncharacterized protein LOC111459954 [Cucurbita moschata])

HSP 1 Score: 308.1 bits (788), Expect = 1.7e-80
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV
Sbjct: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV
Sbjct: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 158
           KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS
Sbjct: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 157

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BLAST of Carg10079 vs. NCBI nr
Match: XP_023006750.1 (uncharacterized protein LOC111499389 [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 1.4e-79
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAFVSFVGRVLFVSVF LSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV
Sbjct: 79  MAFVSFVGRVLFVSVFALSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 138

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV
Sbjct: 139 EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 198

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 158
           KFTQNLALLGALLFFIGMKNSYPRKQV RKNPKSKTS
Sbjct: 199 KFTQNLALLGALLFFIGMKNSYPRKQVVRKNPKSKTS 235

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BLAST of Carg10079 vs. NCBI nr
Match: XP_023547586.1 (uncharacterized protein LOC111806479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.6 bits (771), Expect = 1.6e-78
Identity = 154/157 (98.09%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYL PKFNVFSRNFESHTGLDFPKV
Sbjct: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLNPKFNVFSRNFESHTGLDFPKV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV
Sbjct: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 158
           KFTQNLALLGALLFFIGMKNSYPRKQV RKN KSKTS
Sbjct: 121 KFTQNLALLGALLFFIGMKNSYPRKQVVRKNQKSKTS 157

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BLAST of Carg10079 vs. NCBI nr
Match: XP_011649157.1 (PREDICTED: uncharacterized protein LOC101220681 [Cucumis sativus] >KGN61615.1 hypothetical protein Csa_2G185730 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 8.0e-75
Identity = 144/157 (91.72%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAF+SFVGRVLFVSVFVLSAWQEFNDFGTDGG AAKYLKPKFNVF+RNFESHTGLDFPKV
Sbjct: 1   MAFISFVGRVLFVSVFVLSAWQEFNDFGTDGGPAAKYLKPKFNVFTRNFESHTGLDFPKV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           EILH+VAGA+ LKGLGSLLFIFNSSIGAFLLILHQAIT PILYDFYNYDVEKKEFNQLFV
Sbjct: 61  EILHLVAGALVLKGLGSLLFIFNSSIGAFLLILHQAITTPILYDFYNYDVEKKEFNQLFV 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 158
           KFTQNLALLGALLFFIGMKNS P++ V +KNPKSKTS
Sbjct: 121 KFTQNLALLGALLFFIGMKNSIPKRPVGKKNPKSKTS 157

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BLAST of Carg10079 vs. NCBI nr
Match: XP_008460627.1 (PREDICTED: uncharacterized protein LOC103499406 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 2.3e-74
Identity = 143/157 (91.08%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAF+SFVGRVLFVSVFVLSAWQEFNDFGTDGG AAKYLKPKFNVF+RNFESHTGL+FPKV
Sbjct: 1   MAFISFVGRVLFVSVFVLSAWQEFNDFGTDGGPAAKYLKPKFNVFTRNFESHTGLEFPKV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           EILH+VAGA+ LKGLGSLLFIFNSSIGAFLLILHQAIT PILYDFYNYDVEKKEFNQLFV
Sbjct: 61  EILHLVAGALVLKGLGSLLFIFNSSIGAFLLILHQAITTPILYDFYNYDVEKKEFNQLFV 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 158
           KFTQNLALLGALLFFIGMKNS P++ V +KNPKSKTS
Sbjct: 121 KFTQNLALLGALLFFIGMKNSIPKRPVGKKNPKSKTS 157

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BLAST of Carg10079 vs. TAIR10
Match: AT4G14420.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-53
Identity = 103/158 (65.19%), Postives = 125/158 (79.11%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           M   SF+GR LFVSVF+LSAWQEFNDFG DGG +AK LKPKFN F  +  +HTG   P V
Sbjct: 1   MELASFLGRALFVSVFLLSAWQEFNDFGEDGGRSAKSLKPKFNAFVNHVTTHTGQQLPPV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           ++  +VA AIALKG+G LLF+F SS+GA+LL+LHQA+  PILYDFYNYDV++KEF QLF 
Sbjct: 61  DMKILVAAAIALKGIGGLLFVFGSSLGAYLLLLHQAVATPILYDFYNYDVDRKEFGQLFS 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPR-KQVARKNPKSKTS 158
           KFTQ+LALLG LLFFIGMKNS    +Q+ +K PK+K +
Sbjct: 121 KFTQSLALLGGLLFFIGMKNSRKHGRQLRKKAPKAKAN 158

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BLAST of Carg10079 vs. TAIR10
Match: AT1G04340.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 162.5 bits (410), Expect = 2.1e-40
Identity = 82/159 (51.57%), Postives = 111/159 (69.81%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           M F SF+GRVLF S+F+LSAWQ FNDFGTDGG AAK L PK ++   +  S  G+  P +
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFNDFGTDGGPAAKELAPKLDLTKAHLSSILGVSLPNL 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           E+  VV   +ALKGLG LLF+  +  GA+LL ++  + +PILYDFYNY  E ++F+ L  
Sbjct: 61  EVKQVVWAIVALKGLGGLLFVIGNIFGAYLLAVYLVVVSPILYDFYNYGPEDRQFSLLLT 120

Query: 121 KFTQNLALLGALLFFIGMKNS--YPRKQVARKNPKSKTS 158
           +F Q++ALLGALLFFIGMKNS    ++ + ++ PK K +
Sbjct: 121 EFLQSVALLGALLFFIGMKNSTTSSKRILKKRTPKPKAA 159

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BLAST of Carg10079 vs. TAIR10
Match: AT5G43460.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 154.8 bits (390), Expect = 4.3e-38
Identity = 80/158 (50.63%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           M F SF+GRVLF S+F+LSAWQ FN    DGG AAK L PK ++   +  S  G+  PK+
Sbjct: 1   MGFFSFLGRVLFASLFILSAWQMFN----DGGPAAKELAPKLDLVKAHLSSRLGVTLPKI 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           E+  VVA  IALKG+G LLF+  ++ GA+LL  +  +  PILYDFYNY  +++ F+ L  
Sbjct: 61  EVRQVVATIIALKGVGGLLFVIGNTFGAYLLASYLVVFGPILYDFYNYGPQERHFSLLLT 120

Query: 121 KFTQNLALLGALLFFIGMKNSYP-RKQVARKNPKSKTS 158
           +F Q++AL GALLFFIGMKNS P +K + ++ PK K +
Sbjct: 121 EFLQSVALFGALLFFIGMKNSTPAKKNLKKRTPKPKAA 154

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BLAST of Carg10079 vs. TAIR10
Match: AT3G23190.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-17
Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           M ++   GRV+F S F++SAW+E+  F    G AA  L+PK   F    ++         
Sbjct: 18  MPYLMPAGRVVFASAFLVSAWREYYGF----GLAADELRPKLGFFENQAKA--------- 77

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
               +VA  I +K +G +LFIFN+ +GA LL+++QAI +PILYDFYN D ++  F   + 
Sbjct: 78  ----IVALGILMKFVGGILFIFNTYVGAALLLVYQAILSPILYDFYNRDYDRDHFTVFYT 124

Query: 121 KFTQ 125
           KF +
Sbjct: 138 KFKE 124

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BLAST of Carg10079 vs. TAIR10
Match: AT3G23180.1 (HR-like lesion-inducing protein-related)

HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13
Identity = 39/123 (31.71%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 4   VSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKVEIL 63
           V  +GR LF S F LS+W ++ +   +      Y  PKF              +   +I 
Sbjct: 21  VETIGRALFASSFFLSSWHDYMELKANWNGTEDYWSPKFG-------------YSGDQIK 80

Query: 64  HVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFVKFT 123
           H++  +I ++ LG L+FI+ S  GAFLL+++Q I   + +DFYN+ ++ +EF  L++K  
Sbjct: 81  HLMTVSIIVRTLGGLIFIYGSFFGAFLLLMYQGIATMVHHDFYNHRLDTEEFGLLYLKLK 130

Query: 124 QNL 127
           + L
Sbjct: 141 RIL 130

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BLAST of Carg10079 vs. TrEMBL
Match: tr|A0A0A0LI88|A0A0A0LI88_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G185730 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.3e-75
Identity = 144/157 (91.72%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAF+SFVGRVLFVSVFVLSAWQEFNDFGTDGG AAKYLKPKFNVF+RNFESHTGLDFPKV
Sbjct: 1   MAFISFVGRVLFVSVFVLSAWQEFNDFGTDGGPAAKYLKPKFNVFTRNFESHTGLDFPKV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           EILH+VAGA+ LKGLGSLLFIFNSSIGAFLLILHQAIT PILYDFYNYDVEKKEFNQLFV
Sbjct: 61  EILHLVAGALVLKGLGSLLFIFNSSIGAFLLILHQAITTPILYDFYNYDVEKKEFNQLFV 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 158
           KFTQNLALLGALLFFIGMKNS P++ V +KNPKSKTS
Sbjct: 121 KFTQNLALLGALLFFIGMKNSIPKRPVGKKNPKSKTS 157

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BLAST of Carg10079 vs. TrEMBL
Match: tr|A0A1S3CCF1|A0A1S3CCF1_CUCME (uncharacterized protein LOC103499406 OS=Cucumis melo OX=3656 GN=LOC103499406 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 143/157 (91.08%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAF+SFVGRVLFVSVFVLSAWQEFNDFGTDGG AAKYLKPKFNVF+RNFESHTGL+FPKV
Sbjct: 1   MAFISFVGRVLFVSVFVLSAWQEFNDFGTDGGPAAKYLKPKFNVFTRNFESHTGLEFPKV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           EILH+VAGA+ LKGLGSLLFIFNSSIGAFLLILHQAIT PILYDFYNYDVEKKEFNQLFV
Sbjct: 61  EILHLVAGALVLKGLGSLLFIFNSSIGAFLLILHQAITTPILYDFYNYDVEKKEFNQLFV 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 158
           KFTQNLALLGALLFFIGMKNS P++ V +KNPKSKTS
Sbjct: 121 KFTQNLALLGALLFFIGMKNSIPKRPVGKKNPKSKTS 157

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BLAST of Carg10079 vs. TrEMBL
Match: tr|A0A2P5A9Z6|A0A2P5A9Z6_PARAD (HR-like lesion-inducer OS=Parasponia andersonii OX=3476 GN=PanWU01x14_353720 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.0e-61
Identity = 123/157 (78.34%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGG AAK LKPKF+VFS +  + TG+  P+V
Sbjct: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGPAAKSLKPKFHVFSNHLSTQTGVKVPEV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           EI H+VA AIALKGLGSLLFIF SS GA+LL+LHQAI  PILYDFYNYDVEKKEF QLF 
Sbjct: 61  EIKHLVAAAIALKGLGSLLFIFGSSFGAYLLLLHQAIVTPILYDFYNYDVEKKEFTQLFP 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 158
           KFTQNLAL GALLF+IGMKNS PR+Q+ +K PK+KT+
Sbjct: 121 KFTQNLALFGALLFYIGMKNSIPRRQLRKKAPKAKTT 157

[Close]

BLAST of Carg10079 vs. TrEMBL
Match: tr|A0A2P5AWT4|A0A2P5AWT4_9ROSA (HR-like lesion-inducer OS=Trema orientalis OX=63057 GN=TorRG33x02_339220 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.2e-60
Identity = 122/157 (77.71%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAFVSFVGRVLFVSVFVLSA QEFNDFGTDGG AAK LKPKF+VFS +  +HTG+  P+V
Sbjct: 1   MAFVSFVGRVLFVSVFVLSALQEFNDFGTDGGPAAKSLKPKFHVFSNHLSTHTGVKVPEV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           EI H+VA  IALKGLGSLLFIF SS GA+LL+LHQAI  PILYDFYNYDVEKKEF QLF 
Sbjct: 61  EIKHLVAATIALKGLGSLLFIFGSSFGAYLLLLHQAIVTPILYDFYNYDVEKKEFTQLFP 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKTS 158
           KFTQNLAL GALLF+IGMKNS PR+Q+ +K PK+KT+
Sbjct: 121 KFTQNLALFGALLFYIGMKNSIPRRQLRKKAPKAKTT 157

[Close]

BLAST of Carg10079 vs. TrEMBL
Match: tr|A0A2I4GEI1|A0A2I4GEI1_9ROSI (uncharacterized protein LOC109007185 OS=Juglans regia OX=51240 GN=LOC109007185 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.8e-60
Identity = 119/156 (76.28%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 1   MAFVSFVGRVLFVSVFVLSAWQEFNDFGTDGGAAAKYLKPKFNVFSRNFESHTGLDFPKV 60
           MAFVSFVGRVLF SVF+LSA+QEFNDFG DGG AAKYL PKFNV S +  S TGL  P+V
Sbjct: 1   MAFVSFVGRVLFASVFILSAYQEFNDFGVDGGPAAKYLGPKFNVLSNHISSQTGLQLPEV 60

Query: 61  EILHVVAGAIALKGLGSLLFIFNSSIGAFLLILHQAITAPILYDFYNYDVEKKEFNQLFV 120
           +I H+VA A+ LKGLG LLFIF +S+GAFLL+LHQAI  PILYDFYNYDVEKKE+ QLF+
Sbjct: 61  QIKHLVAAAMVLKGLGGLLFIFGNSLGAFLLLLHQAIATPILYDFYNYDVEKKEYTQLFL 120

Query: 121 KFTQNLALLGALLFFIGMKNSYPRKQVARKNPKSKT 157
           KFTQNLALLGALLFFIGMKNS PR+Q+ +K PKSKT
Sbjct: 121 KFTQNLALLGALLFFIGMKNSMPRRQLRKKAPKSKT 156

The following BLAST results are available for this feature:

BLAST of Carg10079 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958788.1	1.7e-80	100.00	uncharacterized protein LOC111459954 [Cucurbita moschata]	[more]
XP_023006750.1	1.4e-79	98.73	uncharacterized protein LOC111499389 [Cucurbita maxima]	[more]
XP_023547586.1	1.6e-78	98.09	uncharacterized protein LOC111806479 [Cucurbita pepo subsp. pepo]	[more]
XP_011649157.1	8.0e-75	91.72	PREDICTED: uncharacterized protein LOC101220681 [Cucumis sativus] >KGN61615.1 hy...	[more]
XP_008460627.1	2.3e-74	91.08	PREDICTED: uncharacterized protein LOC103499406 [Cucumis melo]	[more]

BLAST of Carg10079 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14420.1	1.2e-53	65.19	HR-like lesion-inducing protein-related	[more]
AT1G04340.1	2.1e-40	51.57	HR-like lesion-inducing protein-related	[more]
AT5G43460.1	4.3e-38	50.63	HR-like lesion-inducing protein-related	[more]
AT3G23190.1	3.2e-17	38.71	HR-like lesion-inducing protein-related	[more]
AT3G23180.1	1.6e-13	31.71	HR-like lesion-inducing protein-related	[more]

BLAST of Carg10079 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg10079 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LI88\|A0A0A0LI88_CUCSA	5.3e-75	91.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G185730 PE=4 SV=1	[more]
tr\|A0A1S3CCF1\|A0A1S3CCF1_CUCME	1.5e-74	91.08	uncharacterized protein LOC103499406 OS=Cucumis melo OX=3656 GN=LOC103499406 PE=...	[more]
tr\|A0A2P5A9Z6\|A0A2P5A9Z6_PARAD	2.0e-61	78.34	HR-like lesion-inducer OS=Parasponia andersonii OX=3476 GN=PanWU01x14_353720 PE=...	[more]
tr\|A0A2P5AWT4\|A0A2P5AWT4_9ROSA	2.2e-60	77.71	HR-like lesion-inducer OS=Trema orientalis OX=63057 GN=TorRG33x02_339220 PE=4 SV...	[more]
tr\|A0A2I4GEI1\|A0A2I4GEI1_9ROSI	4.8e-60	76.28	uncharacterized protein LOC109007185 OS=Juglans regia OX=51240 GN=LOC109007185 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008637	HR_lesion

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10079-RA	Carg10079-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008637	HR-like lesion-inducer	PFAM	PF05514	HR_lesion	coord: 1..138 e-value: 9.4E-58 score: 194.2
None	No IPR available	PANTHER	PTHR31474	FAMILY NOT NAMED	coord: 1..156
None	No IPR available	PANTHER	PTHR31474:SF1	HR-LIKE LESION-INDUCING PROTEIN-RELATED	coord: 1..156

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10079	Watermelon (97103) v2	carwmbB0229
Carg10079	Watermelon (97103) v2	carwmbB0230
Carg10079	Watermelon (97103) v2	carwmbB0235
Carg10079	Wax gourd	carwgoB0282
Carg10079	Wax gourd	carwgoB0284
Carg10079	Cucurbita pepo (Zucchini)	carcpeB0327
Carg10079	Silver-seed gourd	carcarB259
Carg10079	Silver-seed gourd	carcarB262
Carg10079	Silver-seed gourd	carcarB264
Carg10079	Silver-seed gourd	carcarB266
Carg10079	Silver-seed gourd	carcarB267
Carg10079	Cucumber (Gy14) v2	carcgybB0243
Carg10079	Cucumber (Gy14) v2	carcgybB0245
Carg10079	Cucumber (Gy14) v1	carcgyB0269
Carg10079	Cucumber (Gy14) v1	carcgyB0273
Carg10079	Cucurbita maxima (Rimu)	carcmaB0313
Carg10079	Cucurbita maxima (Rimu)	carcmaB0314
Carg10079	Cucurbita maxima (Rimu)	carcmaB0315
Carg10079	Cucurbita maxima (Rimu)	carcmaB0316
Carg10079	Cucurbita maxima (Rimu)	carcmaB0321
Carg10079	Cucurbita moschata (Rifu)	carcmoB0319
Carg10079	Cucurbita moschata (Rifu)	carcmoB0320
Carg10079	Cucurbita moschata (Rifu)	carcmoB0321
Carg10079	Cucurbita moschata (Rifu)	carcmoB0322
Carg10079	Cucurbita moschata (Rifu)	carcmoB0326
Carg10079	Cucurbita pepo (Zucchini)	carcpeB0322
Carg10079	Cucurbita pepo (Zucchini)	carcpeB0323
Carg10079	Cucurbita pepo (Zucchini)	carcpeB0328
Carg10079	Cucurbita pepo (Zucchini)	carcpeB0329
Carg10079	Wild cucumber (PI 183967)	carcpiB0259
Carg10079	Wild cucumber (PI 183967)	carcpiB0261
Carg10079	Cucumber (Chinese Long) v2	carcuB0254
Carg10079	Cucumber (Chinese Long) v2	carcuB0256
Carg10079	Cucumber (Chinese Long) v3	carcucB0258
Carg10079	Cucumber (Chinese Long) v3	carcucB0260
Carg10079	Bottle gourd (USVL1VR-Ls)	carlsiB204
Carg10079	Bottle gourd (USVL1VR-Ls)	carlsiB206
Carg10079	Melon (DHL92) v3.5.1	carmeB0233
Carg10079	Melon (DHL92) v3.5.1	carmeB0236
Carg10079	Melon (DHL92) v3.6.1	carmedB0240
Carg10079	Melon (DHL92) v3.6.1	carmedB0243
Carg10079	Watermelon (Charleston Gray)	carwcgB0220
Carg10079	Watermelon (Charleston Gray)	carwcgB0221
Carg10079	Watermelon (97103) v1	carwmB0215
Carg10079	Watermelon (97103) v1	carwmB0218
Carg10079	Watermelon (97103) v1	carwmB0219