Carg10041 (gene) Silver-seed gourd

NameCarg10041
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_039 : 61985 .. 62249 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGAAGCCCATCACGAAGTCTTCGAATCAAATCCGACGTCGAAAACGAAGATCATGAACAGAGGCAGCAGAGGCAGCAGGCACTTAGAGTTCTCAATCAGTTCATCTCCCACAACCTGTCCCATCTCATTATTGCATGCATCTATCCTCATCATTATTATCAGTTCAGATCAGATCAGATTGTCCCCCTTGATGTACGGCGCCGCCGTGTACCGCCCCACTCCCTCCGACACTTCGTCGTGCTCTTCCCTTTCTCTATAA

mRNA sequence

ATGAAGAGAAGCCCATCACGAAGTCTTCGAATCAAATCCGACGTCGAAAACGAAGATCATGAACAGAGGCAGCAGAGGCAGCAGGCACTTAGAGTTCTCAATCATTCAGATCAGATCAGATTGTCCCCCTTGATGTACGGCGCCGCCGTGTACCGCCCCACTCCCTCCGACACTTCGTCGTGCTCTTCCCTTTCTCTATAA

Coding sequence (CDS)

ATGAAGAGAAGCCCATCACGAAGTCTTCGAATCAAATCCGACGTCGAAAACGAAGATCATGAACAGAGGCAGCAGAGGCAGCAGGCACTTAGAGTTCTCAATCATTCAGATCAGATCAGATTGTCCCCCTTGATGTACGGCGCCGCCGTGTACCGCCCCACTCCCTCCGACACTTCGTCGTGCTCTTCCCTTTCTCTATAA

Protein sequence

MKRSPSRSLRIKSDVENEDHEQRQQRQQALRVLNHSDQIRLSPLMYGAAVYRPTPSDTSSCSSLSL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10041-RACarg10041-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg10041Silver-seed gourdcarcarB260
Carg10041Silver-seed gourdcarcarB263
Carg10041Silver-seed gourdcarcarB264
Carg10041Silver-seed gourdcarcarB265
Carg10041Silver-seed gourdcarcarB266
Carg10041Cucumber (Gy14) v2carcgybB0243
Carg10041Cucumber (Gy14) v2carcgybB0246
Carg10041Cucumber (Gy14) v1carcgyB0269
Carg10041Cucumber (Gy14) v1carcgyB0274
Carg10041Cucurbita maxima (Rimu)carcmaB0313
Carg10041Cucurbita maxima (Rimu)carcmaB0314
Carg10041Cucurbita maxima (Rimu)carcmaB0316
Carg10041Cucurbita maxima (Rimu)carcmaB0321
Carg10041Cucurbita moschata (Rifu)carcmoB0319
Carg10041Cucurbita moschata (Rifu)carcmoB0320
Carg10041Cucurbita moschata (Rifu)carcmoB0322
Carg10041Cucurbita moschata (Rifu)carcmoB0326
Carg10041Cucurbita pepo (Zucchini)carcpeB0322
Carg10041Cucurbita pepo (Zucchini)carcpeB0323
Carg10041Cucurbita pepo (Zucchini)carcpeB0329
Carg10041Wild cucumber (PI 183967)carcpiB0259
Carg10041Wild cucumber (PI 183967)carcpiB0261
Carg10041Cucumber (Chinese Long) v2carcuB0254
Carg10041Cucumber (Chinese Long) v2carcuB0256
Carg10041Cucumber (Chinese Long) v3carcucB0258
Carg10041Cucumber (Chinese Long) v3carcucB0261
Carg10041Bottle gourd (USVL1VR-Ls)carlsiB204
Carg10041Bottle gourd (USVL1VR-Ls)carlsiB206
Carg10041Bottle gourd (USVL1VR-Ls)carlsiB207
Carg10041Melon (DHL92) v3.5.1carmeB0234
Carg10041Melon (DHL92) v3.5.1carmeB0236
Carg10041Melon (DHL92) v3.6.1carmedB0241
Carg10041Melon (DHL92) v3.6.1carmedB0244
Carg10041Watermelon (Charleston Gray)carwcgB0220
Carg10041Watermelon (Charleston Gray)carwcgB0221
Carg10041Watermelon (Charleston Gray)carwcgB0225
Carg10041Watermelon (97103) v1carwmB0215
Carg10041Watermelon (97103) v1carwmB0217
Carg10041Watermelon (97103) v1carwmB0218
Carg10041Watermelon (97103) v1carwmB0219
Carg10041Watermelon (97103) v2carwmbB0229
Carg10041Watermelon (97103) v2carwmbB0230
Carg10041Watermelon (97103) v2carwmbB0233
Carg10041Watermelon (97103) v2carwmbB0235
Carg10041Wax gourdcarwgoB0282
Carg10041Wax gourdcarwgoB0284
Carg10041Wax gourdcarwgoB0286
Carg10041Cucurbita pepo (Zucchini)carcpeB0327