Carg09980 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGAGAGAGAGAGAGAGAAGGGGAAGGGGAAAGGGGGAGTTGAGTTTTGTGAAGAAGATGAAGATCACTGCGTTGCTGGTCTTGAAATGCCACCCAGAAGGATCTGATCCGATTATATTGGCCAACGCCGCTGATGTGAGTCATTTCGGTTACTTTCAGAGGCCCAGCGTTAGGGAGTTCATCTGCTTCGTTGGTCGGACCGTCGCTAAGCGTACCCCTCCTGACCAGCGTCAATCTGTTCAGCACGAAGGTCTATTCTTTTTTTCTTTATTCTATTTGTTAGTTCTCTGTTACGGTCATGTTCTGCCTTTATGCTTGCATTGTTGTGTTGGGATTCTTCCTTCTGATTGTGCATTTTTTTTTCTTCTTGCTTAATTGCTGTAATTGGAGTTTTGCTTTCGATTTTGGGGTTTTCCTTGTTTTTTTATTTTTATTTTTTATTTATCAATCTCATAATCAGGATTTTGTATGCTGATCAGATCATAGGAAGATAGAAAGTCCAATAGTTGGAGGGAACGTAGTATGATTGTAGTTTAGGCGAAAACGAACAGGATGTGGTGGAAATTCAAGTGACAAGAGGCAAAATGATACCCGAAGAGACGATAAAACCAAGAAATGCCCCATGATGATCCCCTTTCCACTTTTGGTTTAAGCGGGCGTCGACAGTCAGCTGAATGTTCTTGTGAAATCATTTTTGCCCTGTTAGTGTCTTTATGCAGTTAATTGCATATGGTTCATTCAATCTGAATCTGTATAGGGGATCTATTGAGTCTGGTCATTTATAGGAGAGGAATTTGTAACAACTTCAAATCTGAATTGTAGTGTAAGGTTTACGTAGAAGATTTTGATTTCTTACACTTCTTTTAGGTTTTGTTTTTTCTTATTTTGTTCAATAGGACAAATTGTCTTTCTTTCATGTTCTTCTCTACCTTTAAGTCACTGTTAAAGATGTTCTGCAATGCTGGTTTACCAGTTAATACCTGTCCAGCTTCAGCTATTAATTGTGTTCTACGTTATTGAATTTTCTACGAATCATTTGAAATTTTGTAGAGTATAAGGTGCATAGTTACAATAGAAATGGTCTTTGTGCTTTGGGATTTATGGATGACCACTACCCGGTTCGAAGTGCATTCTCTCTGCTTAACCAGGTGAAAATCACTCTTATTCACATCTAACAAATGTATTGCTGTAGAGCACTCTTTCTTTTCATGTAAAATTATGTTATTTTGTTGGATTTTGCATTGACGAGTTATTTTTCTTAAGAAAAAGACAAACTAATAGTCGGATTAGTGATTTCTGATTAAATAACTTCACTGGAACAATACTGCATCAGGCTCAAGTAATGTCAGCATCATATTGCAGTATGAAGATTAGTTTTATTCTCTTATTATAAATTTTCAATGATTATAGTACCGAATTATTATGATATGTGGATAAACCGAAGGTCATTGACTTGAGCTAATCTTAGTCCTAATCCATATACATAGCTATAATTTTATCCCTTTTTTAGTGTGTATATATATATATATATATATATATATGTATGTATGTATGTATGTATATTATCAAAGTAGTTTTTGTATTTTGTCTCTGTATGATTGTAACTATTGTTAATGCACGTTGGTTTCTACCAGGTTATGGACGAGTACCAAAAAATTTTTGGTGAAACATGGAGAACTGCACAAGCAGATAACTTTCAACCATGGCCCTATCTGACTGAAGCTTTAACCAAATTCCAGGTTTATTGCCCTCCTTTCTACATTTAATTAAGACATAATTGCATGACCGAATTTGAAACGTATTTACAGCCTTCATTCCCCCACCTCAACCAGTGATTATAACATTTTCTATTATTTACTGTCCAGGACCCTGCAGAGGCTGATAAATTGTTGAAAATACAGCGGGAGTTGGACGAAACCAAAATTATTCTTGTAAGTTCTTTTAATATATATCTTCCAGGGTTGTATGCTACATTGCTGTTTTCTGGTTGATTAATTTTCATGCTGATATGTTTCTATCTTCCAATACAGCATAAGACGATTGACAGCGTGCTTGAACGTGGTGAAAAGTTGGACAGTTTGGTCGAGAAGAGTTCTGATCTCAGTGCAGCATCCCAGGTATGCGATTGTACATAACTAGTAGAAAATAGTATGTGTTAGATTTCTGGTCCATGAGATGGTGTTACTTACTTGAATTCTTCTCAACTAATGTTACAACTACATTCATGAAGCATTTGACGTTTTTCCATTTCCTTAAGAACCTACCTAACTGTAGCGCACTTGTGATTGAACAGATGTTCTACAAACAAGCTAAAAAGACCAACCAGTGTTGTACCATACTGTAAGCTTTTGATGGCATCACATAGAAAGTTGAACCAGATAATTGATGATTGTAATATGATTATATCCTTCACAATTTGTTTGTTTCGCTGAATCTTGTGAATTTTATCCTCGTTTGTTGTTTAAAAGATGGGGGAACAAAATGTTGGGCGTAGATCCTACTCGTATAGTATATTGACGTCTCATTTTCTTCATTGGTGTTAGTTCACATATGCTTGTTTCCATTTTCAATGGAATGTTCATTATTGATCCCTCTTGATGTTAATCAATGCTGATAAATGTCGATCGAGTTACCTCTTGCAATCACATTTTTATTAGACGAGTTCGGATCTTACTAACAAGTTGTACTTATGATTGGTAAACCATGAGTGCGATTTAAAGCACGACCATACCGAGATACACACATAATATGTACTCACAAACCAACATTTTACACAACTGATGAGAAGAGTAGCAAGATAGGGTTCTGATGTTATAAACATAAGCTTCTGTGATCTGTTTACTTTCCCAGAAGAATGGACTTTATCCACCATATGCCTTTTGTATCTTTGGGACCTTCACCTTCTGGTGGAGGATCGCTCTGTGGTGTCTTGTGCAGTTTGTTTACATCATAACCCAATTCCTTGGCTTTTTCAAGCAGCTCATTGTATATCTCCTCGTTAAGATGAGTATTTCTGCACAATATCTGCACAATACACCAAAAAAACACCATCAGTATACAGAACCCACAATATGAAACTTTGGAATGAGAGAGTGAAATTTGAAAACATACCCAAAGATTCTTCCTTGAAGGCTCCCCAACCAGGACATACTGATAATCACCATCAATATACAAAACCCAGTAATTCCCAACAACTGGAATGATTGGAAGGAAGGGAGGCAAATAGAATTTGACCTTGAACTTGGCCTCCTGGCTTGAAGGCTCAGCCTTATAAGCCACACCTTCTATGGAACTTCTCTTGCCATCGCTCCAAGTTTCATTCACCACTTTCACAGTTCCATCTTCTTTTAGCGTATAAGTAGCCCTTGTGTTCACACCATTCTTTGGTTGATTTCTCGATGGAATTGAAGCTATCTCATACCATCTTCCCATGTACTTCTCAAGATCCAACCCTTTAACCACTTCCATATCTTTCTTTGCCATCGTTTCAAATGTGAAACAACACACAGAAATGTTGGTTTCTGGACAACATATTTGTAGAGACACAGGATTACTTGTGTGGATGCTTATCTATAAGGTCTTTTCAGCTGTCCCCATCTGGCCGAATGGCTGAGATGAAAGTAGAAACTTCCAGATGGGTGGTTTCTAGAACCCAACATTATTGCAG AGAGAGAGAGAGAGAGAGAAGGGGAAGGGGAAAGGGGGAGTTGAGTTTTGTGAAGAAGATGAAGATCACTGCGTTGCTGGTCTTGAAATGCCACCCAGAAGGATCTGATCCGATTATATTGGCCAACGCCGCTGATGTGAGTCATTTCGGTTACTTTCAGAGGCCCAGCGTTAGGGAGTTCATCTGCTTCGTTGGTCGGACCGTCGCTAAGCGTACCCCTCCTGACCAGCGTCAATCTGTTCAGCACGAAGAGTATAAGGTGCATAGTTACAATAGAAATGGTCTTTGTGCTTTGGGATTTATGGATGACCACTACCCGGTTCGAAGTGCATTCTCTCTGCTTAACCAGGTTATGGACGAGTACCAAAAAATTTTTGGTGAAACATGGAGAACTGCACAAGCAGATAACTTTCAACCATGGCCCTATCTGACTGAAGCTTTAACCAAATTCCAGGACCCTGCAGAGGCTGATAAATTGTTGAAAATACAGCGGGAGTTGGACGAAACCAAAATTATTCTTCATAAGACGATTGACAGCGTGCTTGAACGTGGTGAAAAGTTGGACAGTTTGGTCGAGAAGAGTTCTGATCTCAGTGCAGCATCCCAGATGTTCTACAAACAAGCTAAAAAGACCAACCAGTGTTGTACCATACTGTAAGCTTTTGATGGCATCACATAGAAAGTTGAACCAGATAATTGATGATTGTAATATGATTATATCCTTCACAATTTGTTTGTTTCGCTGAATCTTGTGAATTTTATCCTCGTTTGTTGTTTAAAAGATGGGGGAACAAAATGTTGGGCGTAGATCCTACTCGTATAGTATATTGACGTCTCATTTTCTTCATTGGTGTTAGTTCACATATGCTTGTTTCCATTTTCAATGGAATGTTCATTATTGATCCCTCTTGATGTTAATCAATGCTGATAAATGTCGATCGAGTTACCTCTTGCAATCACATTTTTATTAGACGAGTTCGGATCTTACTAACAAGTTGTACTTATGATTGGTAAACCATGAGTGCGATTTAAAGCACGACCATACCGAGATACACACATAATATGTACTCACAAACCAACATTTTACACAACTGATGAGAAGAGTAGCAAGATAGGGTTCTGATGTTATAAACATAAGCTTCTGTGATCTGTTTACTTTCCCAGAAGAATGGACTTTATCCACCATATGCCTTTTGTATCTTTGGGACCTTCACCTTCTGGTGGAGGATCGCTCTGTGGTGTCTTGTGCAGTTTGTTTACATCATAACCCAATTCCTTGGCTTTTTCAAGCAGCTCATTGTATATCTCCTCGTTAAGATGAAGTGAAATTTGAAAACATACCCAAAGATTCTTCCTTGAAGGCTCCCCAACCAGGACATACTGATAATCACCATCAATATACAAAACCCAGTAATTCCCAACAACTGGAATGATTGGAAGGAAGGGAGGCAAATAGAATTTGACCTTGAACTTGGCCTCCTGGCTTGAAGGCTCAGCCTTATAAGCCACACCTTCTATGGAACTTCTCTTGCCATCGCTCCAAGTTTCATTCACCACTTTCACAGTTCCATCTTCTTTTAGCGTATAAGTAGCCCTTGTGTTCACACCATTCTTTGGTTGATTTCTCGATGGAATTGAAGCTATCTCATACCATCTTCCCATGTACTTCTCAAGATCCAACCCTTTAACCACTTCCATATCTTTCTTTGCCATCGTTTCAAATGTGAAACAACACACAGAAATGTTGGTTTCTGGACAACATATTTGTAGAGACACAGGATTACTTGTGTGGATGCTTATCTATAAGGTCTTTTCAGCTGTCCCCATCTGGCCGAATGGCTGAGATGAAAGTAGAAACTTCCAGATGGGTGGTTTCTAGAACCCAACATTATTGCAG ATGAAGATCACTGCGTTGCTGGTCTTGAAATGCCACCCAGAAGGATCTGATCCGATTATATTGGCCAACGCCGCTGATGTGAGTCATTTCGGTTACTTTCAGAGGCCCAGCGTTAGGGAGTTCATCTGCTTCGTTGGTCGGACCGTCGCTAAGCGTACCCCTCCTGACCAGCGTCAATCTGTTCAGCACGAAGAGTATAAGGTGCATAGTTACAATAGAAATGGTCTTTGTGCTTTGGGATTTATGGATGACCACTACCCGGTTCGAAGTGCATTCTCTCTGCTTAACCAGGTTATGGACGAGTACCAAAAAATTTTTGGTGAAACATGGAGAACTGCACAAGCAGATAACTTTCAACCATGGCCCTATCTGACTGAAGCTTTAACCAAATTCCAGGACCCTGCAGAGGCTGATAAATTGTTGAAAATACAGCGGGAGTTGGACGAAACCAAAATTATTCTTCATAAGACGATTGACAGCGTGCTTGAACGTGGTGAAAAGTTGGACAGTTTGGTCGAGAAGAGTTCTGATCTCAGTGCAGCATCCCAGATGTTCTACAAACAAGCTAAAAAGACCAACCAGTGTTGTACCATACTGTAA MKITALLVLKCHPEGSDPIILANAADVSHFGYFQRPSVREFICFVGRTVAKRTPPDQRQSVQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVMDEYQKIFGETWRTAQADNFQPWPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL
BLAST of Carg09980 vs. NCBI nr
Match: XP_022921839.1 (VAMP-like protein YKT61 [Cucurbita moschata] >XP_022987991.1 VAMP-like protein YKT61 [Cucurbita maxima] >XP_023516758.1 VAMP-like protein YKT61 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 404.1 bits (1037), Expect = 2.8e-109 Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Carg09980 vs. NCBI nr
Match: XP_008443877.1 (PREDICTED: VAMP-like protein YKT61 [Cucumis melo]) HSP 1 Score: 389.0 bits (998), Expect = 9.4e-105 Identity = 190/199 (95.48%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Carg09980 vs. NCBI nr
Match: XP_022932687.1 (VAMP-like protein YKT61 [Cucurbita moschata]) HSP 1 Score: 387.9 bits (995), Expect = 2.1e-104 Identity = 189/199 (94.97%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of Carg09980 vs. NCBI nr
Match: XP_023005976.1 (VAMP-like protein YKT61 [Cucurbita maxima] >XP_023529981.1 VAMP-like protein YKT61 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 386.7 bits (992), Expect = 4.7e-104 Identity = 188/199 (94.47%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of Carg09980 vs. NCBI nr
Match: XP_004146695.1 (PREDICTED: VAMP-like protein YKT61 [Cucumis sativus] >KGN65235.1 hypothetical protein Csa_1G268290 [Cucumis sativus]) HSP 1 Score: 383.6 bits (984), Expect = 4.0e-103 Identity = 188/199 (94.47%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of Carg09980 vs. TAIR10
Match: AT5G58060.2 (SNARE-like superfamily protein) HSP 1 Score: 338.2 bits (866), Expect = 3.5e-93 Identity = 171/221 (77.38%), Postives = 183/221 (82.81%), Query Frame = 0
BLAST of Carg09980 vs. TAIR10
Match: AT5G58180.1 (Synaptobrevin family protein) HSP 1 Score: 305.1 bits (780), Expect = 3.2e-83 Identity = 152/201 (75.62%), Postives = 170/201 (84.58%), Query Frame = 0
BLAST of Carg09980 vs. TAIR10
Match: AT2G25340.1 (vesicle-associated membrane protein 712) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10 Identity = 37/142 (26.06%), Postives = 72/142 (50.70%), Query Frame = 0
BLAST of Carg09980 vs. TAIR10
Match: AT5G11150.1 (vesicle-associated membrane protein 713) HSP 1 Score: 62.0 bits (149), Expect = 4.8e-10 Identity = 37/140 (26.43%), Postives = 71/140 (50.71%), Query Frame = 0
BLAST of Carg09980 vs. TAIR10
Match: AT4G32150.1 (vesicle-associated membrane protein 711) HSP 1 Score: 61.6 bits (148), Expect = 6.2e-10 Identity = 36/151 (23.84%), Postives = 80/151 (52.98%), Query Frame = 0
BLAST of Carg09980 vs. Swiss-Prot
Match: sp|Q9ZRD6|YKT61_ARATH (VAMP-like protein YKT61 OS=Arabidopsis thaliana OX=3702 GN=YKT61 PE=2 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 2.6e-98 Identity = 174/199 (87.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of Carg09980 vs. Swiss-Prot
Match: sp|Q9LVM9|YKT62_ARATH (VAMP-like protein YKT62 OS=Arabidopsis thaliana OX=3702 GN=YKT62 PE=3 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 5.8e-82 Identity = 152/201 (75.62%), Postives = 170/201 (84.58%), Query Frame = 0
BLAST of Carg09980 vs. Swiss-Prot
Match: sp|Q757A4|YKT6_ASHGO (Synaptobrevin homolog YKT6 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=YKT6 PE=3 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 8.0e-47 Identity = 101/202 (50.00%), Postives = 139/202 (68.81%), Query Frame = 0
BLAST of Carg09980 vs. Swiss-Prot
Match: sp|Q6FW27|YKT6_CANGA (Synaptobrevin homolog YKT6 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=YKT6 PE=3 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 9.8e-45 Identity = 99/205 (48.29%), Postives = 137/205 (66.83%), Query Frame = 0
BLAST of Carg09980 vs. Swiss-Prot
Match: sp|Q6BSL0|YKT6_DEBHA (Synaptobrevin homolog YKT6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=YKT6 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.4e-43 Identity = 93/202 (46.04%), Postives = 136/202 (67.33%), Query Frame = 0
BLAST of Carg09980 vs. TrEMBL
Match: tr|A0A1S3B9V7|A0A1S3B9V7_CUCME (VAMP-like protein YKT61 OS=Cucumis melo OX=3656 GN=LOC103487367 PE=3 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 6.2e-105 Identity = 190/199 (95.48%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Carg09980 vs. TrEMBL
Match: tr|A0A0A0LTH9|A0A0A0LTH9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G268290 PE=3 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 2.6e-103 Identity = 188/199 (94.47%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of Carg09980 vs. TrEMBL
Match: tr|A0A164ZMG3|A0A164ZMG3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_019371 PE=3 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 1.2e-100 Identity = 182/199 (91.46%), Postives = 188/199 (94.47%), Query Frame = 0
BLAST of Carg09980 vs. TrEMBL
Match: tr|B9HAR1|B9HAR1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G187700v3 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 6.0e-100 Identity = 183/199 (91.96%), Postives = 190/199 (95.48%), Query Frame = 0
BLAST of Carg09980 vs. TrEMBL
Match: tr|B9SBY5|B9SBY5_RICCO (Snare protein ykt6, putative OS=Ricinus communis OX=3988 GN=RCOM_0700610 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 1.0e-99 Identity = 182/199 (91.46%), Postives = 190/199 (95.48%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |