Carg09927 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09927
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	cucumber peeling cupredoxin-like
Location	Cucurbita_argyrosperma_scaffold_030 : 532620 .. 533176 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCAACAAGATCGAGCTTCCTTGCTTCCCTCCTCTTCATTGGGGCTCTCCTCCATGCTGCTGCCGCCGTCGACCACCGTGTCGGAGGCGATTTTGGTTGGAACCTACCGCCAACACCCACCTTCTTCTCTGAATGGGCTACCAATATCACTTTCTCTGTGGGCGATACACTAAGTAAATATCCATACTTGTTAAGCTCATTCATAATTGTTTATGTTCCATAAGTACTGAAATAAATGGGGGGTTTTGTGTAGGGTTCAATTCAAGTGCCAATCAAACCCACAACTACGCCATGCCCGAGTCTCAAGCAGAGTTTGATGGATGTGTGAAGCCAGGAATATTTTTCGAGAATGTAATTTTTGTTACCTTTGATCGTCCTGGTCGTAAATACTTTATCTGTAATGTTGGCAACCACTGCAATTTGGGCATGAAATTTGCCGTCGACGTTTTGCCTAGCCCTGGAATGCCGCCCAACTCTGCTCTCAAAATTGGTGCAGTTCCTACCCTGTTCATGATCACCACCATCCTGCCCAATTTGTTGTTCTTCATTTGA

mRNA sequence

ATGGGTTCAACAAGATCGAGCTTCCTTGCTTCCCTCCTCTTCATTGGGGCTCTCCTCCATGCTGCTGCCGCCGTCGACCACCGTGTCGGAGGCGATTTTGGTTGGAACCTACCGCCAACACCCACCTTCTTCTCTGAATGGGCTACCAATATCACTTTCTCTGTGGGCGATACACTAAGGTTCAATTCAAGTGCCAATCAAACCCACAACTACGCCATGCCCGAGTCTCAAGCAGAGTTTGATGGATGTGTGAAGCCAGGAATATTTTTCGAGAATGTAATTTTTGTTACCTTTGATCGTCCTGGTCGTAAATACTTTATCTGTAATGTTGGCAACCACTGCAATTTGGGCATGAAATTTGCCGTCGACGTTTTGCCTAGCCCTGGAATGCCGCCCAACTCTGCTCTCAAAATTGGTGCAGTTCCTACCCTGTTCATGATCACCACCATCCTGCCCAATTTGTTGTTCTTCATTTGA

Coding sequence (CDS)

ATGGGTTCAACAAGATCGAGCTTCCTTGCTTCCCTCCTCTTCATTGGGGCTCTCCTCCATGCTGCTGCCGCCGTCGACCACCGTGTCGGAGGCGATTTTGGTTGGAACCTACCGCCAACACCCACCTTCTTCTCTGAATGGGCTACCAATATCACTTTCTCTGTGGGCGATACACTAAGGTTCAATTCAAGTGCCAATCAAACCCACAACTACGCCATGCCCGAGTCTCAAGCAGAGTTTGATGGATGTGTGAAGCCAGGAATATTTTTCGAGAATGTAATTTTTGTTACCTTTGATCGTCCTGGTCGTAAATACTTTATCTGTAATGTTGGCAACCACTGCAATTTGGGCATGAAATTTGCCGTCGACGTTTTGCCTAGCCCTGGAATGCCGCCCAACTCTGCTCTCAAAATTGGTGCAGTTCCTACCCTGTTCATGATCACCACCATCCTGCCCAATTTGTTGTTCTTCATTTGA

Protein sequence

MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKFAVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI

Homology

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BLAST of Carg09927 vs. NCBI nr
Match: XP_022960663.1 (umecyanin-like [Cucurbita moschata])

HSP 1 Score: 325.1 bits (832), Expect = 1.3e-85
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATN TFSVGDTLR
Sbjct: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNTTFSVGDTLR 60

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF
Sbjct: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120

Query: 121 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 159
           AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI
Sbjct: 121 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 158

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BLAST of Carg09927 vs. NCBI nr
Match: XP_023516867.1 (umecyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.3 bits (765), Expect = 7.8e-78
Identity = 144/157 (91.72%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           M STRSSFLASLLFIGALL AAAA+DHRVGGDFGWNLPPTPTFFSEWATN TFSVGDTLR
Sbjct: 1   MASTRSSFLASLLFIGALLQAAAAIDHRVGGDFGWNLPPTPTFFSEWATNTTFSVGDTLR 60

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSANQTHNYAMPESQ EFDGCVKPG+FFENVIFVTFDRPGRKYFICNVGNHCNLGMKF
Sbjct: 61  FNSSANQTHNYAMPESQPEFDGCVKPGLFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120

Query: 121 AVDVLPSPGMPPNSALKIGAVPTLFMI-TTILPNLLF 157
           AVDVLP+PGMPPNSALKIGA PTLF I T  LPN LF
Sbjct: 121 AVDVLPNPGMPPNSALKIGAFPTLFFIATAFLPNFLF 157

[Close]

BLAST of Carg09927 vs. NCBI nr
Match: XP_022987885.1 (cucumber peeling cupredoxin-like [Cucurbita maxima])

HSP 1 Score: 294.3 bits (752), Expect = 2.5e-76
Identity = 146/162 (90.12%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLH---AAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGD 60
           MGSTRSSFLASLLFIGALL    AAAAVDHRVGGDFGWNLPPTPTFFSEWA+N +FSVGD
Sbjct: 22  MGSTRSSFLASLLFIGALLQAAAAAAAVDHRVGGDFGWNLPPTPTFFSEWASNTSFSVGD 81

Query: 61  TLRFNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLG 120
           TLRFNSSANQTHNY MPESQAEFDGCVKPGIFFENVIFVTFDRP RKYFICNVGNHC LG
Sbjct: 82  TLRFNSSANQTHNYGMPESQAEFDGCVKPGIFFENVIFVTFDRPARKYFICNVGNHCKLG 141

Query: 121 MKFAVDVLPSPGMPPNSALKIGAVPTLFMI-TTILPNLLFFI 159
           MKFAVDVLP+PGMPPNSALKIGA PTLF I T ILPN LFFI
Sbjct: 142 MKFAVDVLPNPGMPPNSALKIGAFPTLFFIATAILPNFLFFI 183

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BLAST of Carg09927 vs. NCBI nr
Match: XP_008443975.1 (PREDICTED: umecyanin-like [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 5.2e-58
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           + + + +FLAS LFI  LL A AA+D++VGGDFGWNLPPTPTFFSEWA+N TF VGDTLR
Sbjct: 2   VSTQKLTFLASFLFIAVLLPAVAAIDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDTLR 61

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSAN+THNYAMP SQAE DGCVKPGI F   ++   DRPGRKYFIC VGNHCNLGMKF
Sbjct: 62  FNSSANETHNYAMPGSQAELDGCVKPGIVFMGGVYPVLDRPGRKYFICEVGNHCNLGMKF 121

Query: 121 AVDVLPSPG-MPPNSALKIGAVPTLFMI-TTILPNLLFFI 159
           AVDV+P PG MPPN+ALK+ A P L +I  TI+ N LFFI
Sbjct: 122 AVDVMPIPGSMPPNAALKLDAFPMLLLIFITIIINFLFFI 161

[Close]

BLAST of Carg09927 vs. NCBI nr
Match: XP_004151459.1 (PREDICTED: umecyanin-like [Cucumis sativus] >KGN65341.1 hypothetical protein Csa_1G348950 [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 1.7e-56
Identity = 110/159 (69.18%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           + + + +FLAS LFI  LL A AAVD++VGGDFGWNLPPTPTFFSEWA+N TF VGD LR
Sbjct: 2   VSTQKVTFLASFLFIAVLLPAVAAVDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDRLR 61

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSAN+THNYAMP SQAE DGCVKPGI F   +F   DRPGR+YFIC VGNHCNLGMKF
Sbjct: 62  FNSSANETHNYAMPGSQAELDGCVKPGIVFVGNVFPVLDRPGRRYFICEVGNHCNLGMKF 121

Query: 121 AVDVLPSPG-MPPNSALKIGAVPTLFMITTILPNLLFFI 159
           A+DV+P  G MPPN+ALKI A P L +  T++ N LF I
Sbjct: 122 AIDVMPILGSMPPNAALKIDAFPMLLLFITMITNFLFII 160

[Close]

BLAST of Carg09927 vs. TAIR10
Match: AT2G32300.1 (uclacyanin 1)

HSP 1 Score: 78.2 bits (191), Expect = 5.1e-15
Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 3   STRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFN 62
           ++R   +   +    L+    A DH +GG  GW +  +      WA   TF+VGD L F+
Sbjct: 2   ASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVFS 61

Query: 63  SSANQTHNYAMPESQAEFDGC--VKPGIFFEN-VIFVTFDRPGRKYFICNVGNHCNLGMK 122
             A    +  +  ++ EFD C  VKP I F N    V    PG++YFIC +  HC+ GMK
Sbjct: 62  YPA--AFHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMK 121

Query: 123 FAVDVLPSPGMPPNSALKIGAVPTL 145
             V+V+P+  + P + L    VP+L
Sbjct: 122 LEVNVVPTATVAPTAPLP-NTVPSL 140

[Close]

BLAST of Carg09927 vs. TAIR10
Match: AT5G20230.1 (blue-copper-binding protein)

HSP 1 Score: 74.3 bits (181), Expect = 7.4e-14
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 24  AVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGC 83
           A D+ VG D  W  P  P F++ WAT  TF VGD L F+ +A + H+ A+  S+A F+ C
Sbjct: 22  AEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR-HDVAV-VSEAAFENC 81

Query: 84  VKPGIFFENV---IFVTFDRPGRKYFICNVGNHCNLGMKFAVDVL 126
            K           + +  +  G +YFIC VG+HC  G K ++ V+
Sbjct: 82  EKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV 124

[Close]

BLAST of Carg09927 vs. TAIR10
Match: AT3G18590.1 (early nodulin-like protein 5)

HSP 1 Score: 71.2 bits (173), Expect = 6.3e-13
Identity = 43/131 (32.82%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTF---FSEWATNITFSVGD 60
           M S++   +   L    +    ++ +  VGG+ GW +P + T    F++WA++  F VGD
Sbjct: 1   MDSSKKIIIVMFLVTFYMFSCVSSTEFEVGGENGWIVPKSKTLGDAFNQWASDNRFKVGD 60

Query: 61  TLRFNSSANQTHNYAMPESQAEFDGC--VKPGIFFENVIFV-TFDRPGRKYFICNVGNHC 120
           TLRF      T +  +  S+ E+  C   KP ++  N   V   DRPG  YFI  V  HC
Sbjct: 61  TLRF----KYTKDSVLVVSEEEYKKCKATKPQLYSNNEDTVFKLDRPGLFYFISGVSGHC 120

Query: 121 NLGMKFAVDVL 126
             G K  V V+
Sbjct: 121 EKGQKMIVKVM 127

[Close]

BLAST of Carg09927 vs. TAIR10
Match: AT1G48940.1 (early nodulin-like protein 6)

HSP 1 Score: 61.6 bits (148), Expect = 5.0e-10
Identity = 39/137 (28.47%), Postives = 64/137 (46.72%), Query Frame = 0


Query: 9   LASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPT---FFSEWATNITFSVGDTLRFNSSA 68
           L S+     +    +  +   GG+ GW +P +      F++WA+   F VGDT+RF    
Sbjct: 8   LLSIFVCFYVFSLVSCTEFEAGGENGWIIPQSSNQSDIFNQWASKNRFKVGDTIRFKYKK 67

Query: 69  NQTHNYAMPESQAEFDGC--VKPGIF--FENVIFVTFDRPGRKYFICNVGNHCNLGMKFA 128
           +      +  ++ E+  C   KP ++   ++ +F   DRPG  YFI  V  HC  G K  
Sbjct: 68  DS----VLVVTEDEYKKCQTTKPELYSNHDDTVF-KLDRPGLFYFISGVSGHCEQGQKMI 127

Query: 129 VDVL---PSPGMPPNSA 136
           + V+    +P  PP S+
Sbjct: 128 IKVMEVESTPQSPPPSS 139

[Close]

BLAST of Carg09927 vs. TAIR10
Match: AT2G31050.1 (Cupredoxin superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.5e-10
Identity = 43/133 (32.33%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 6   SSFLASLLFIGALLH-AAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTL----- 65
           ++F  SLL + AL   +     H+VG   GW +      +  WA+ ITF VGD+L     
Sbjct: 7   NAFFTSLLILVALFGISVGGTVHKVGDSDGWTI--MSVNYETWASTITFQVGDSLVFKYN 66

Query: 66  -RFNSSANQTHN-YAMPESQAEFDGCVKPGIFFE---NVIFVTFDRPGRKYFICNVGNHC 125
             F+     THN Y M E         KP   +E   +++ +T  +PG ++FIC    HC
Sbjct: 67  KDFHDVTEVTHNDYEMCEPS-------KPLARYETGSDIVILT--KPGLQHFICGFPGHC 126

Query: 126 NLGMKFAVDVLPS 128
           ++G K  + VLP+
Sbjct: 127 DMGQKLQIHVLPA 128

[Close]

BLAST of Carg09927 vs. Swiss-Prot
Match: sp|P29602|CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-15
Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 27  HRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGC--- 86
           H VG + GW++P +P F+S+WA   TF VGD+L+FN  AN  HN    E++  FD C   
Sbjct: 5   HIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPAN-AHNVHEMETKQSFDACNFV 64

Query: 87  -VKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKFAVDVL 126
                +   + +    D  G  YF+C VG HC+ G K +++V+
Sbjct: 65  NSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVV 106

[Close]

BLAST of Carg09927 vs. Swiss-Prot
Match: sp|O82081|UCC1_ARATH (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 9.2e-14
Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 3   STRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFN 62
           ++R   +   +    L+    A DH +GG  GW +  +      WA   TF+VGD L F+
Sbjct: 2   ASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVFS 61

Query: 63  SSANQTHNYAMPESQAEFDGC--VKPGIFFEN-VIFVTFDRPGRKYFICNVGNHCNLGMK 122
             A    +  +  ++ EFD C  VKP I F N    V    PG++YFIC +  HC+ GMK
Sbjct: 62  YPA--AFHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMK 121

Query: 123 FAVDVLPSPGMPPNSALKIGAVPTL 145
             V+V+P+  + P + L    VP+L
Sbjct: 122 LEVNVVPTATVAPTAPLP-NTVPSL 140

[Close]

BLAST of Carg09927 vs. Swiss-Prot
Match: sp|P42849|UMEC_ARMRU (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 26  DHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGCVK 85
           D+ VGGD  W  P  P F+  WAT  TF VGD L F+ +A   H+ A+    A FD C K
Sbjct: 2   DYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGM-HDVAVVTKDA-FDNCKK 61

Query: 86  PGIFFENV---IFVTFDRPGRKYFICNVGNHCNLGMKFAVDVLPSPG 130
                      + +  +  G +Y+IC VG+HC +G K +++V+ + G
Sbjct: 62  ENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 106

[Close]

BLAST of Carg09927 vs. Swiss-Prot
Match: sp|Q07488|BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 24  AVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGC 83
           A D+ VG D  W  P  P F++ WAT  TF VGD L F+ +A + H+ A+  S+A F+ C
Sbjct: 22  AEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR-HDVAV-VSEAAFENC 81

Query: 84  VKPGIFFENV---IFVTFDRPGRKYFICNVGNHCNLGMKFAVDVL 126
            K           + +  +  G +YFIC VG+HC  G K ++ V+
Sbjct: 82  EKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV 124

[Close]

BLAST of Carg09927 vs. Swiss-Prot
Match: sp|P80728|MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-09
Identity = 35/106 (33.02%), Postives = 51/106 (48.11%), Query Frame = 0


Query: 24  AVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGC 83
           A  H+VG   GW     P  +++WA++  F VGD+L FN + N+ HN  +   Q +F  C
Sbjct: 1   ATVHKVGDSTGWT-TLVPYDYAKWASSNKFHVGDSLLFNYN-NKFHN-VLQVDQEQFKSC 60

Query: 84  ---VKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKFAVDVLP 127
                   +      +   RPG  YF+C +  HC LG K  + V P
Sbjct: 61  NSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 103

[Close]

BLAST of Carg09927 vs. TrEMBL
Match: tr|A0A1S3B9D0|A0A1S3B9D0_CUCME (umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487432 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.5e-58
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           + + + +FLAS LFI  LL A AA+D++VGGDFGWNLPPTPTFFSEWA+N TF VGDTLR
Sbjct: 2   VSTQKLTFLASFLFIAVLLPAVAAIDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDTLR 61

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSAN+THNYAMP SQAE DGCVKPGI F   ++   DRPGRKYFIC VGNHCNLGMKF
Sbjct: 62  FNSSANETHNYAMPGSQAELDGCVKPGIVFMGGVYPVLDRPGRKYFICEVGNHCNLGMKF 121

Query: 121 AVDVLPSPG-MPPNSALKIGAVPTLFMI-TTILPNLLFFI 159
           AVDV+P PG MPPN+ALK+ A P L +I  TI+ N LFFI
Sbjct: 122 AVDVMPIPGSMPPNAALKLDAFPMLLLIFITIIINFLFFI 161

[Close]

BLAST of Carg09927 vs. TrEMBL
Match: tr|A0A0A0LZE7|A0A0A0LZE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G348950 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.1e-56
Identity = 110/159 (69.18%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           + + + +FLAS LFI  LL A AAVD++VGGDFGWNLPPTPTFFSEWA+N TF VGD LR
Sbjct: 2   VSTQKVTFLASFLFIAVLLPAVAAVDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDRLR 61

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSAN+THNYAMP SQAE DGCVKPGI F   +F   DRPGR+YFIC VGNHCNLGMKF
Sbjct: 62  FNSSANETHNYAMPGSQAELDGCVKPGIVFVGNVFPVLDRPGRRYFICEVGNHCNLGMKF 121

Query: 121 AVDVLPSPG-MPPNSALKIGAVPTLFMITTILPNLLFFI 159
           A+DV+P  G MPPN+ALKI A P L +  T++ N LF I
Sbjct: 122 AIDVMPILGSMPPNAALKIDAFPMLLLFITMITNFLFII 160

[Close]

BLAST of Carg09927 vs. TrEMBL
Match: tr|A0A1S3CJW8|A0A1S3CJW8_CUCME (cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103501290 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.3e-40
Identity = 82/157 (52.23%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 3   STRSSF-LASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRF 62
           +T SSF      F+GA++H   AV+H+VGG+FGWNLP TPTFFS+WA+N TF V D L F
Sbjct: 4   TTMSSFAFVIFFFLGAIVHVGVAVEHKVGGNFGWNLPSTPTFFSDWASNRTFFVNDKLIF 63

Query: 63  NSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKFA 122
            S +N+TH+   PESQAEFDGC+KPG +   + +++  +P R+YF+  +G+ C  GMKFA
Sbjct: 64  ESRSNETHSIGQPESQAEFDGCIKPGFYLNKIQYISLSQPRRRYFMSTIGDDCKAGMKFA 123

Query: 123 VDVLPSPGMPPNSALKIGAVP-TLFMITTILPNLLFF 158
           V++LP+   P NSA K+GA P  LF I TI+ +LL F
Sbjct: 124 VNILPN---PRNSAAKVGAWPMLLFSIATIMASLLLF 157

[Close]

BLAST of Carg09927 vs. TrEMBL
Match: tr|A0A0A0KAM8|A0A0A0KAM8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G018590 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 81/156 (51.92%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 3   STRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFN 62
           +T SSF    L +G LLH   AV+H+VGG+FGWNLP TPTFFS+WA+N TF V D L F 
Sbjct: 4   TTISSFAFFFLLLGVLLHVGVAVEHKVGGNFGWNLPSTPTFFSDWASNRTFFVDDKLIFE 63

Query: 63  SSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKFAV 122
           S +N+ H+   P SQA+FDGCV P   F  V F++  +P R+YF+   G+ C  GMKFA+
Sbjct: 64  SRSNEVHSIGQPISQADFDGCVNPSFVFRKVQFISLSQPMRRYFMSTFGDDCEAGMKFAI 123

Query: 123 DVLPSPGMPPNSALKIGAVP-TLFMITTILPNLLFF 158
           ++LP    P NSA K+GA P  LF I TI+ NL  F
Sbjct: 124 NILPK---PRNSAAKVGAWPMLLFSIATIMANLFMF 156

[Close]

BLAST of Carg09927 vs. TrEMBL
Match: tr|A0A1S3CJX2|A0A1S3CJX2_CUCME (umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103501294 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 77/152 (50.66%), Postives = 100/152 (65.79%), Query Frame = 0


Query: 7   SFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSAN 66
           S L  L FIG++      +DH+VGGDFGWNLPPT TF+SEWA N TF + D LRF S AN
Sbjct: 6   SSLMCLFFIGSVFQVVVGIDHKVGGDFGWNLPPTLTFYSEWARNNTFFIHDRLRFISRAN 65

Query: 67  QTHNYAMPESQAEFDGCVKPGIFFENVIFVTF--DRPGRKYFICNVGNHCNLGMKFAVDV 126
           +TH ++   S+ +FD CVK GI F+  I  T   +R G +YFIC  GNHCN+GMKF V+V
Sbjct: 66  ETHTFSEANSKKDFDECVKQGIVFDTSIIFTLQNNRLGPRYFICTDGNHCNMGMKFTVEV 125

Query: 127 LPSPGMPPNSALKIGAVPTLFMITTILPNLLF 157
           LP+    PN+A+K G +  +    T++ NL F
Sbjct: 126 LPNSVTIPNTAVKTGVLRPILFFITLMANLFF 157

The following BLAST results are available for this feature:

BLAST of Carg09927 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960663.1	1.3e-85	99.37	umecyanin-like [Cucurbita moschata]	[more]
XP_023516867.1	7.8e-78	91.72	umecyanin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987885.1	2.5e-76	90.12	cucumber peeling cupredoxin-like [Cucurbita maxima]	[more]
XP_008443975.1	5.2e-58	71.25	PREDICTED: umecyanin-like [Cucumis melo]	[more]
XP_004151459.1	1.7e-56	69.18	PREDICTED: umecyanin-like [Cucumis sativus] >KGN65341.1 hypothetical protein Csa...	[more]

BLAST of Carg09927 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32300.1	5.1e-15	33.79	uclacyanin 1	[more]
AT5G20230.1	7.4e-14	37.14	blue-copper-binding protein	[more]
AT3G18590.1	6.3e-13	32.82	early nodulin-like protein 5	[more]
AT1G48940.1	5.0e-10	28.47	early nodulin-like protein 6	[more]
AT2G31050.1	6.5e-10	32.33	Cupredoxin superfamily protein	[more]

BLAST of Carg09927 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P29602\|CPC_CUCSA	2.9e-15	37.86	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
sp\|O82081\|UCC1_ARATH	9.2e-14	33.79	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
sp\|P42849\|UMEC_ARMRU	2.1e-13	36.45	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
sp\|Q07488\|BCB1_ARATH	1.3e-12	37.14	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
sp\|P80728\|MAVI_CUCPE	6.8e-09	33.02	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]

BLAST of Carg09927 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B9D0\|A0A1S3B9D0_CUCME	3.5e-58	71.25	umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487432 PE=4 SV=1	[more]
tr\|A0A0A0LZE7\|A0A0A0LZE7_CUCSA	1.1e-56	69.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G348950 PE=4 SV=1	[more]
tr\|A0A1S3CJW8\|A0A1S3CJW8_CUCME	4.3e-40	52.23	cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103501290 PE=4 SV...	[more]
tr\|A0A0A0KAM8\|A0A0A0KAM8_CUCSA	1.2e-37	51.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G018590 PE=4 SV=1	[more]
tr\|A0A1S3CJX2\|A0A1S3CJX2_CUCME	1.3e-36	50.66	umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103501294 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR028871	BlueCu_1_BS
IPR039391	Phytocyanin
IPR008972	Cupredoxin
IPR003245	Phytocyanin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09927-RA	Carg09927-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 38..118 e-value: 1.5E-12 score: 47.2
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 76..134 e-value: 2.0E-6 score: 120.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 25..126 score: 26.601
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 22..127 e-value: 6.0E-26 score: 92.7
IPR008972	Cupredoxin	SUPERFAMILY	SSF49503	Cupredoxins	coord: 24..126
IPR039391	Phytocyanin	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 11..133
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 102..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09927	Cla016694	Watermelon (97103) v1	carwmB0125
Carg09927	Csa7G432470	Cucumber (Chinese Long) v2	carcuB0143
Carg09927	Csa2G006890	Cucumber (Chinese Long) v2	carcuB0139
Carg09927	ClCG11G003200	Watermelon (Charleston Gray)	carwcgB0124
Carg09927	CSPI02G01860	Wild cucumber (PI 183967)	carcpiB0143
Carg09927	Cucsa.105480	Cucumber (Gy14) v1	carcgyB0152
Carg09927	CmoCh17G008320	Cucurbita moschata (Rifu)	carcmoB0177
Carg09927	Lsi11G003330	Bottle gourd (USVL1VR-Ls)	carlsiB111
Carg09927	Lsi06G009850	Bottle gourd (USVL1VR-Ls)	carlsiB115
Carg09927	CsGy7G018800	Cucumber (Gy14) v2	carcgybB0142
Carg09927	CsaV3_7G032350	Cucumber (Chinese Long) v3	carcucB0151
Carg09927	Cla97C11G209660	Watermelon (97103) v2	carwmbB0131

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09927	Cucumber (Chinese Long) v3	carcucB0143
Carg09927	Cucumber (Chinese Long) v3	carcucB0147
Carg09927	Melon (DHL92) v3.5.1	carmeB0131
Carg09927	Melon (DHL92) v3.5.1	carmeB0133
Carg09927	Melon (DHL92) v3.6.1	carmedB0135
Carg09927	Melon (DHL92) v3.6.1	carmedB0137
Carg09927	Watermelon (Charleston Gray)	carwcgB0125
Carg09927	Watermelon (97103) v1	carwmB0126
Carg09927	Watermelon (97103) v2	carwmbB0132
Carg09927	Watermelon (97103) v2	carwmbB0133
Carg09927	Watermelon (97103) v2	carwmbB0136
Carg09927	Wax gourd	carwgoB0165
Carg09927	Wax gourd	carwgoB0159
Carg09927	Silver-seed gourd	carcarB041
Carg09927	Silver-seed gourd	carcarB149
Carg09927	Silver-seed gourd	carcarB152
Carg09927	Cucumber (Gy14) v2	carcgybB0133
Carg09927	Cucumber (Gy14) v2	carcgybB0137
Carg09927	Cucumber (Gy14) v1	carcgyB0154
Carg09927	Cucurbita maxima (Rimu)	carcmaB0166
Carg09927	Cucurbita maxima (Rimu)	carcmaB0169
Carg09927	Cucurbita maxima (Rimu)	carcmaB0171
Carg09927	Cucurbita moschata (Rifu)	carcmoB0172
Carg09927	Cucurbita moschata (Rifu)	carcmoB0175
Carg09927	Cucurbita moschata (Rifu)	carcmoB0179
Carg09927	Cucurbita pepo (Zucchini)	carcpeB0181
Carg09927	Cucurbita pepo (Zucchini)	carcpeB0185
Carg09927	Cucurbita pepo (Zucchini)	carcpeB0186
Carg09927	Cucurbita pepo (Zucchini)	carcpeB0189
Carg09927	Wild cucumber (PI 183967)	carcpiB0139
Carg09927	Cucumber (Chinese Long) v2	carcuB0135