Carg09900 (gene) Silver-seed gourd

NameCarg09900
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_030 : 412154 .. 414843 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTGTAAAAAAAAAAACAGCCTAGACAGAAAATGGACTCTGCTGAGCGGATTGGAAAGGTCATGTTTATCGATATCTTTGAAGAGTGGAACTTTGTTCATCACGAATCGTCGGTTGAGTTTAATTTCGTTTGCTTTGATAATTTTTTTTTTACTATCTGCTCTGACTCTGAATTCCATCCCGTTCTTGTATTTTACAGATGATGAATCTTGTTTCCGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATGTAAGAGACGATTCAAATTCATAAAAACTACCGCCATTCAAACTAAGTACATTTAGAACTTGTTCTTGATATGATTTTCGATTTCGTAAAAGTTTTGCAACGAACCTTTTTTTCTTTTTTGAAATGTGTAGAGATGGTGTTGGTAGCTATGTGTATTTTGGATCTGTTCTTGTACAAGTTCAGGTGAGGAATTTTCTATGATAGGTTAATTGGAATCCCCAAAGTAAATAGCCTAATTAGATAATGAAGGCGAATTATGCTACATAATTCACCTGCAAAGGTTCTCTAGAGATTCGAGTTTTTTCTAGGGGACACCAAATCTTCTTTACAGCCACTGATGAAAGTTGGGTTTGACTCGCAATTTGAGCCTAATAATGTTATTAGAAGGGCGTTTTCATTAATGTCCGTTGAAGTGGGGCATCTGGTTCTTATCTATTTTTATACATAAGAATTTATTTCTTTGAGATTTGATGGTTGAAGAACCATAAATTATTGAGCTGAAAGTTGAGTCTATCTTATTAGGAGCTTGCTATTCACACAGATTCTGAATCTTAATCAATACCCCACCCTCTCAACCTTCCCCCTGGTTCAATCTCAAAGCTTCTATATGCTGACATAATAGTTTCCATTTCAATTTGATTCTGTGTTTAAAGCAACCATTGACATTCCAAACAGTATTTGGATATGTTTGTTCTTGTTTTGCGCATCCATTAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGTATCAAGCTATGTTGCAATGCTAAAGAGGGGAAAATGGGCCTCCACCCATGATATCTATATTGAGGAGCATTCTAAGGGCTTAACATTATTGTTGTTAGTCATTACAAAAAGAAAAAGGAAAACAAAAGGCAGCATTTGGATAGGGATCGGATGCCAAGAAGACGATATAATCGCATAAGGAGAGCCTTCCAAAATTCCTTCCCGCTTTAAACTGCACCACCTAAAAGATAGAGCACCCAAAATTGAATCACACCCAAGTGACACACGGTAAATTAAACACTTTTTGAGGGGCAGTAGATAACAAAAAGGTGCAAATTATGTTCTTCATTGATATAAACTCACCGAAACCTCTTGGTGTTTTGCATTTAAAACACTCCATCCTGCTTGCATAATTATGTATTCCGCATCCAATTCTGTACAACACAACATTATATGTTTTTTTCTTTCAGTTCAACATTACATGTTAATTAAACACATTGAATACTGGTGCGAGTTTAAACAACATCAACCAATTTTATTGTTCGTTTTCAGCGTGATCTTTTGAGTAAGGAATTTGAAATTCTGTCGCTGAAAGTAATGCAGGTGTGAATTATATTTCCATTTGAATGGCTTTACTGTTTTGATAAACTTTTATTGTATAGTTTATTGTTGTGTATGTACCTAGGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTGTAAGTTGAAGGGTCTGGGCCTCCATACTTGGGGTAACTGCAACGATGACATGCTTCTCTTTTCTTGAAATTTACGTTCTGGCAAACGTTGCATATCCAGTCTCCTGCTGACCAGCTCATTCCCTTCTATATATCAAAATACCATTATCCATAAGTTGAGAGAGAATCAAATAAAAAACTGCACAAGGGGTCTAAAACTCTGTCATAATCTTCAACAATGTTCAAGCTCTATGAATGCAATTGGAGTGCCAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAAGAAACTTAAGACTTCAAAATTTGAGTACCCTTTTCCCCAAATGCCTTGTCGATGGCTAATGTAAACACACATATATTTCTTTTGTGGGGGGTGGGGGAGGGGAGGGGGGAGGTTGAAGTAGGAAGCTCACCTTGATGAAGAAAAGATGGATGTAATAAAGAATGGTTCTGTTGGGTAATAGGTGAATTGAATTGGTGGAAGAGAATTCAAAATTGTTAGAAGTGAGTTTGTTGAATTTGTTAGCTGGGGGAGCGGGGGGTTTATATAGTTGGCCAACTTCTCAGTGTTGGGGTCCATTTTATGGTGGTGTTTCTTTTATTCCCTTGCCTTTACATAGATGGTTTCCTCCTCATGTGATTCCCGGAAGTTGATTATCTTTTTATTCTTAACACAGAAAACGTTGGGCCCGACGGGCAACCCGGTTGGTAAGAGCTCGGAGTCTCTTAGGCATACCGGCTTAGATATCCCAAATTTGAATCTTCAG

mRNA sequence

TTTTGTAAAAAAAAAAACAGCCTAGACAGAAAATGGACTCTGCTGAGCGGATTGGAAAGGTCATGTTTATCGATATCTTTGAAGAGTGGAACTTTGTTCATCACGAATCGTCGGTTGAGTTTAATTTCGTTTGCTTTGATAATTTTTTTTTTACTATCTGCTCTGACTCTGAATTCCATCCCGTTCTTGTATTTTACAGATGATGAATCTTGTTTCCGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATAGATGGTGTTGGTAGCTATGTGTATTTTGGATCTGTTCTTGTACAAGTTCAGCGTGATCTTTTGAGTAAGGAATTTGAAATTCTGTCGCTGAAAGTAATGCAGTTTATTGTTGTGTATGTACCTAGGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTAAAACGTTGGGCCCGACGGGCAACCCGGTTGGTAAGAGCTCGGAGTCTCTTAGGCATACCGGCTTAGATATCCCAAATTTGAATCTTCAG

Coding sequence (CDS)

TTTTGTAAAAAAAAAAACAGCCTAGACAGAAAATGGACTCTGCTGAGCGGATTGGAAAGGTCATGTTTATCGATATCTTTGAAGAGTGGAACTTTGTTCATCACGAATCGTCGGTTGAGTTTAATTTCGTTTGCTTTGATAATTTTTTTTTTACTATCTGCTCTGACTCTGAATTCCATCCCGTTCTTGTATTTTACAGATGATGAATCTTGTTTCCGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATAGATGGTGTTGGTAGCTATGTGTATTTTGGATCTGTTCTTGTACAAGTTCAGCGTGATCTTTTGAGTAAGGAATTTGAAATTCTGTCGCTGAAAGTAATGCAGTTTATTGTTGTGTATGTACCTAGGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTAAAACGTTGGGCCCGACGGGCAACCCGGTTGGTAAGAGCTCGGAGTCTCTTAGGCATACCGGCTTAGATATCCCAAATTTGAATCTTCAG

Protein sequence

FCKKKNSLDRKWTLLSGLERSCLSISLKSGTLFITNRRLSLISFALIIFFLLSALTLNSIPFLYFTDDESCFRGDGGDSRFSTEIEGVATKIESGKVIDGVGSYVYFGSVLVQVQRDLLSKEFEILSLKVMQFIVVYVPRANPVSRFPSRWDACIRSILIGTHHVGAIITRIDGLKCTTSKAVRAAGVIVSSAADGSAVPVSGQHLRLVVTKTLGPTGNPVGKSSESLRHTGLDIPNLNLQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09900-RACarg09900-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..241

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09900Silver-seed gourdcarcarB039
Carg09900Silver-seed gourdcarcarB041
Carg09900Silver-seed gourdcarcarB147
Carg09900Silver-seed gourdcarcarB149
Carg09900Silver-seed gourdcarcarB152
Carg09900Silver-seed gourdcarcarB158
Carg09900Cucumber (Gy14) v2carcgybB0133
Carg09900Cucumber (Gy14) v2carcgybB0137
Carg09900Cucumber (Gy14) v2carcgybB0140
Carg09900Cucumber (Gy14) v2carcgybB0142
Carg09900Cucumber (Gy14) v1carcgyB0152
Carg09900Cucumber (Gy14) v1carcgyB0154
Carg09900Cucurbita maxima (Rimu)carcmaB0166
Carg09900Cucurbita maxima (Rimu)carcmaB0167
Carg09900Cucurbita maxima (Rimu)carcmaB0170
Carg09900Cucurbita maxima (Rimu)carcmaB0171
Carg09900Cucurbita moschata (Rifu)carcmoB0172
Carg09900Cucurbita moschata (Rifu)carcmoB0173
Carg09900Cucurbita moschata (Rifu)carcmoB0176
Carg09900Cucurbita moschata (Rifu)carcmoB0177
Carg09900Cucurbita moschata (Rifu)carcmoB0178
Carg09900Cucurbita moschata (Rifu)carcmoB0179
Carg09900Cucurbita pepo (Zucchini)carcpeB0190
Carg09900Cucurbita pepo (Zucchini)carcpeB0181
Carg09900Cucurbita pepo (Zucchini)carcpeB0183
Carg09900Cucurbita pepo (Zucchini)carcpeB0186
Carg09900Cucurbita pepo (Zucchini)carcpeB0187
Carg09900Cucurbita pepo (Zucchini)carcpeB0189
Carg09900Wild cucumber (PI 183967)carcpiB0139
Carg09900Wild cucumber (PI 183967)carcpiB0143
Carg09900Wild cucumber (PI 183967)carcpiB0146
Carg09900Cucumber (Chinese Long) v2carcuB0143
Carg09900Cucumber (Chinese Long) v2carcuB0135
Carg09900Cucumber (Chinese Long) v2carcuB0139
Carg09900Cucumber (Chinese Long) v2carcuB0142
Carg09900Cucumber (Chinese Long) v3carcucB0143
Carg09900Cucumber (Chinese Long) v3carcucB0147
Carg09900Cucumber (Chinese Long) v3carcucB0150
Carg09900Cucumber (Chinese Long) v3carcucB0151
Carg09900Bottle gourd (USVL1VR-Ls)carlsiB111
Carg09900Bottle gourd (USVL1VR-Ls)carlsiB114
Carg09900Bottle gourd (USVL1VR-Ls)carlsiB115
Carg09900Melon (DHL92) v3.5.1carmeB0134
Carg09900Melon (DHL92) v3.5.1carmeB0130
Carg09900Melon (DHL92) v3.5.1carmeB0131
Carg09900Melon (DHL92) v3.5.1carmeB0133
Carg09900Melon (DHL92) v3.6.1carmedB0133
Carg09900Melon (DHL92) v3.6.1carmedB0137
Carg09900Melon (DHL92) v3.6.1carmedB0138
Carg09900Watermelon (Charleston Gray)carwcgB0123
Carg09900Watermelon (Charleston Gray)carwcgB0124
Carg09900Watermelon (Charleston Gray)carwcgB0125
Carg09900Watermelon (Charleston Gray)carwcgB0127
Carg09900Watermelon (97103) v1carwmB0123
Carg09900Watermelon (97103) v1carwmB0124
Carg09900Watermelon (97103) v1carwmB0125
Carg09900Watermelon (97103) v1carwmB0126
Carg09900Watermelon (97103) v2carwmbB0137
Carg09900Watermelon (97103) v2carwmbB0131
Carg09900Watermelon (97103) v2carwmbB0133
Carg09900Watermelon (97103) v2carwmbB0135
Carg09900Watermelon (97103) v2carwmbB0136
Carg09900Wax gourdcarwgoB0165
Carg09900Wax gourdcarwgoB0154
Carg09900Wax gourdcarwgoB0159
Carg09900Wax gourdcarwgoB0161