Carg09886 (gene) Silver-seed gourd

NameCarg09886
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_030 : 341784 .. 342293 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTTGTGGGTCCATCTGAAATTCATCCCTTGAGCCCAAAACAGACGAGCCCATTCCCTGACAGATTTACGGATGAGGCGAGGCCCCAAATGGAAAGACGAGGAAAATGGGGAAGTATGAAGATCATTATTATGGTCATTATGAATCACCATCATCCGCGCGGGGAATCGTTAAAGGAGACATCCCATCTGCTTTGCACTTGCAGGCCCTTCTTCAACATTTTTATTGTACTTTGCATTAATATCGATCAGCATCTGCAGAAAAATCGAGTCCGAATCTTTCCTCGACTTCAGGTACTCAATACGGAGCTCTCTCTAATGTCTTTGTTTCTGTTTATTCCAATTACTTTGAACCGTTTTCCCATGGTTAATTCGAATGCTCTGAAGCCCCAACCTGTAATTTCCTCAATGATTGACTTCAAGATATCTAATTCTTATTCTGGGTATTGGTTTTCGATCTCTGTGAATTTGTGATTCAGTTTGTTCTAGGGCTGGGCAAGAAGATAA

mRNA sequence

ATGAATCTTGTGGGTCCATCTGAAATTCATCCCTTGAGCCCAAAACAGACGAGCCCATTCCCTGACAGATTTACGGATGAGGCGAGGCCCCAAATGGAAAGACGAGGAAAATGGGGAAGTATGAAGATCATTATTATGGTCATTATGAATCACCATCATCCGCGCGGGGAATCGTTAAAGGAGACATCCCATCTGCTTTGCACTTGCAGGCCCTTCTTCAACATTTTTATTGTACTTTGCATTAATATCGATCAGCATCTGCAGAAAAATCGAGTCCGAATCTTTCCTCGACTTCAGGGCTGGGCAAGAAGATAA

Coding sequence (CDS)

ATGAATCTTGTGGGTCCATCTGAAATTCATCCCTTGAGCCCAAAACAGACGAGCCCATTCCCTGACAGATTTACGGATGAGGCGAGGCCCCAAATGGAAAGACGAGGAAAATGGGGAAGTATGAAGATCATTATTATGGTCATTATGAATCACCATCATCCGCGCGGGGAATCGTTAAAGGAGACATCCCATCTGCTTTGCACTTGCAGGCCCTTCTTCAACATTTTTATTGTACTTTGCATTAATATCGATCAGCATCTGCAGAAAAATCGAGTCCGAATCTTTCCTCGACTTCAGGGCTGGGCAAGAAGATAA

Protein sequence

MNLVGPSEIHPLSPKQTSPFPDRFTDEARPQMERRGKWGSMKIIIMVIMNHHHPRGESLKETSHLLCTCRPFFNIFIVLCINIDQHLQKNRVRIFPRLQGWARR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09886-RACarg09886-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09886Silver-seed gourdcarcarB039
Carg09886Silver-seed gourdcarcarB041
Carg09886Silver-seed gourdcarcarB147
Carg09886Silver-seed gourdcarcarB152
Carg09886Cucumber (Gy14) v2carcgybB0133
Carg09886Cucumber (Gy14) v2carcgybB0137
Carg09886Cucumber (Gy14) v2carcgybB0142
Carg09886Cucurbita maxima (Rimu)carcmaB0166
Carg09886Cucurbita maxima (Rimu)carcmaB0167
Carg09886Cucurbita maxima (Rimu)carcmaB0169
Carg09886Cucurbita maxima (Rimu)carcmaB0170
Carg09886Cucurbita maxima (Rimu)carcmaB0171
Carg09886Cucurbita moschata (Rifu)carcmoB0172
Carg09886Cucurbita moschata (Rifu)carcmoB0173
Carg09886Cucurbita moschata (Rifu)carcmoB0175
Carg09886Cucurbita moschata (Rifu)carcmoB0176
Carg09886Cucurbita moschata (Rifu)carcmoB0179
Carg09886Cucurbita pepo (Zucchini)carcpeB0190
Carg09886Cucurbita pepo (Zucchini)carcpeB0181
Carg09886Cucurbita pepo (Zucchini)carcpeB0185
Carg09886Cucurbita pepo (Zucchini)carcpeB0186
Carg09886Cucurbita pepo (Zucchini)carcpeB0187
Carg09886Wild cucumber (PI 183967)carcpiB0139
Carg09886Wild cucumber (PI 183967)carcpiB0143
Carg09886Wild cucumber (PI 183967)carcpiB0146
Carg09886Cucumber (Chinese Long) v2carcuB0143
Carg09886Cucumber (Chinese Long) v2carcuB0135
Carg09886Cucumber (Chinese Long) v2carcuB0139
Carg09886Cucumber (Chinese Long) v3carcucB0143
Carg09886Cucumber (Chinese Long) v3carcucB0147
Carg09886Cucumber (Chinese Long) v3carcucB0151
Carg09886Bottle gourd (USVL1VR-Ls)carlsiB111
Carg09886Bottle gourd (USVL1VR-Ls)carlsiB114
Carg09886Bottle gourd (USVL1VR-Ls)carlsiB115
Carg09886Melon (DHL92) v3.5.1carmeB0131
Carg09886Melon (DHL92) v3.5.1carmeB0133
Carg09886Melon (DHL92) v3.6.1carmedB0135
Carg09886Melon (DHL92) v3.6.1carmedB0137
Carg09886Watermelon (Charleston Gray)carwcgB0123
Carg09886Watermelon (Charleston Gray)carwcgB0124
Carg09886Watermelon (Charleston Gray)carwcgB0125
Carg09886Watermelon (97103) v1carwmB0123
Carg09886Watermelon (97103) v1carwmB0125
Carg09886Watermelon (97103) v1carwmB0126
Carg09886Watermelon (97103) v2carwmbB0137
Carg09886Watermelon (97103) v2carwmbB0131
Carg09886Watermelon (97103) v2carwmbB0133
Carg09886Watermelon (97103) v2carwmbB0135
Carg09886Watermelon (97103) v2carwmbB0136
Carg09886Wax gourdcarwgoB0165
Carg09886Wax gourdcarwgoB0154
Carg09886Wax gourdcarwgoB0159
Carg09886Wax gourdcarwgoB0161