Carg09836 (gene) Silver-seed gourd

NameCarg09836
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_030 : 68483 .. 69291 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGAAGAATTGAAACGGGCTTGAAGAGTGGGTTGAAATTCAATACACGAATGACCCAATATTGCAATCCAGACCGCCATGAACAGACCTTGAGAAGTGAAGATGGTCCATCAACGCAGCATTCATGTAGGAGCCAGAGAACAATCGCTACCAGATAAGGATTTAAAGCAGCACCGTTCATTACCCTCACCATTATATTCATGGAATAGCTTCTTATCACACACTTCTCTCGCTATTTTCCTTTTGTTTCTCCCCATTTCCAACATTCCAAACCCGCAAATTTTGTTTTCTATTACTCTTTCTCAGGTACTCAATTCTGTACTCTGCTCAAATGCCTCACTGCTTTTCTCTGCCTTCCTTGATTTCTCATTCCTACAAATTATCACTTAAATTTGTATGCGTATTCCTGTTCTTTCTGTTTTTGAGTTCGTCTTAGGAAATTGAGTTCTAATGCTTATGGAAGTTTCTGTTGGGAATGTCCACTTCTTTGGTATTTATCTGCTACGAATTATTTCCAATTCTCAACTCTAATTACTCCTGTTGCTCAATCACAAGGATAATTATGTTAGCCTAACTTTGGCGAGCTTTAATCATTCTTAATTTTAACCTCTGCCAAGCCATTCTCTTATTAAATGAATTCTTGATTTAGCTTAGATGTTGAGTATTTATGTGTGTTAATATGCCTCTCTGAAATTTGATCGTGGAGAATTGTTGTGTGTAAATTGTGATGCTGTCAATGATGTTTGCAGGGGAAAACAAGGATGAAGAACTAACAACGGGAAGGGGCCCTTCTCCCTACACTTGA

mRNA sequence

ATGAAGAGAAGAATTGAAACGGGCTTGAAGAGTGGGTTGAAATTCAATACACGAATGACCCAATATTGCAATCCAGACCGCCATGAACAGACCTTGAGAAGTGAAGATGGTCCATCAACGCAGCATTCATGGGAAAACAAGGATGAAGAACTAACAACGGGAAGGGGCCCTTCTCCCTACACTTGA

Coding sequence (CDS)

ATGAAGAGAAGAATTGAAACGGGCTTGAAGAGTGGGTTGAAATTCAATACACGAATGACCCAATATTGCAATCCAGACCGCCATGAACAGACCTTGAGAAGTGAAGATGGTCCATCAACGCAGCATTCATGGGAAAACAAGGATGAAGAACTAACAACGGGAAGGGGCCCTTCTCCCTACACTTGA

Protein sequence

MKRRIETGLKSGLKFNTRMTQYCNPDRHEQTLRSEDGPSTQHSWENKDEELTTGRGPSPYT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09836-RACarg09836-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..52

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09836Watermelon (97103) v1carwmB0123
Carg09836Watermelon (97103) v1carwmB0125
Carg09836Watermelon (97103) v1carwmB0127
Carg09836Watermelon (97103) v2carwmbB0131
Carg09836Watermelon (97103) v2carwmbB0134
Carg09836Wax gourdcarwgoB0163
Carg09836Wax gourdcarwgoB0165
Carg09836Wax gourdcarwgoB0155
Carg09836Silver-seed gourdcarcarB041
Carg09836Silver-seed gourdcarcarB152
Carg09836Silver-seed gourdcarcarB156
Carg09836Cucumber (Gy14) v2carcgybB0136
Carg09836Cucumber (Gy14) v2carcgybB0137
Carg09836Cucumber (Gy14) v2carcgybB0141
Carg09836Cucumber (Gy14) v2carcgybB0142
Carg09836Cucumber (Gy14) v1carcgyB0153
Carg09836Cucumber (Gy14) v1carcgyB0162
Carg09836Cucurbita maxima (Rimu)carcmaB0166
Carg09836Cucurbita maxima (Rimu)carcmaB0169
Carg09836Cucurbita maxima (Rimu)carcmaB0170
Carg09836Cucurbita maxima (Rimu)carcmaB0171
Carg09836Cucurbita moschata (Rifu)carcmoB0172
Carg09836Cucurbita moschata (Rifu)carcmoB0175
Carg09836Cucurbita moschata (Rifu)carcmoB0176
Carg09836Cucurbita moschata (Rifu)carcmoB0179
Carg09836Cucurbita moschata (Rifu)carcmoB0180
Carg09836Cucurbita pepo (Zucchini)carcpeB0190
Carg09836Cucurbita pepo (Zucchini)carcpeB0181
Carg09836Cucurbita pepo (Zucchini)carcpeB0185
Carg09836Cucurbita pepo (Zucchini)carcpeB0186
Carg09836Wild cucumber (PI 183967)carcpiB0143
Carg09836Wild cucumber (PI 183967)carcpiB0146
Carg09836Cucumber (Chinese Long) v2carcuB0143
Carg09836Cucumber (Chinese Long) v2carcuB0139
Carg09836Cucumber (Chinese Long) v3carcucB0146
Carg09836Cucumber (Chinese Long) v3carcucB0147
Carg09836Cucumber (Chinese Long) v3carcucB0151
Carg09836Bottle gourd (USVL1VR-Ls)carlsiB111
Carg09836Bottle gourd (USVL1VR-Ls)carlsiB114
Carg09836Bottle gourd (USVL1VR-Ls)carlsiB115
Carg09836Melon (DHL92) v3.5.1carmeB0129
Carg09836Melon (DHL92) v3.5.1carmeB0131
Carg09836Melon (DHL92) v3.5.1carmeB0132
Carg09836Melon (DHL92) v3.5.1carmeB0133
Carg09836Melon (DHL92) v3.6.1carmedB0134
Carg09836Melon (DHL92) v3.6.1carmedB0135
Carg09836Melon (DHL92) v3.6.1carmedB0136
Carg09836Melon (DHL92) v3.6.1carmedB0137
Carg09836Watermelon (Charleston Gray)carwcgB0123
Carg09836Watermelon (Charleston Gray)carwcgB0124
Carg09836Watermelon (Charleston Gray)carwcgB0126