Carg09660 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09660
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ribonucleoside diphosphate reductase subunit
Location	Cucurbita_argyrosperma_scaffold_023 : 219209 .. 220198 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGCAATTCCCGACGAGCCTCTCCTTGCCCCTAACCCCGACCGCTTTTGCATGTTCCCGATTCAGTATCCTCAAATCTGGGAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCTGAGGAAGTCGATCTCTCGCAGGACCTTCGCCATTGGGAATCTTTAACTTCCGATGAGAAGCACTTCATCACTCACGTTCTTGCGTTCTTCGCTGCCTCCGATGGCATCGTTTTGGAGAATCTCGCCGGGCGGTTCATGAAGGAAGTCCAAGTTGCTGAGGCTAGAGCCTTCTATGGATTCCAAATCGCCATCGAGAATATCCACTCGGAGATGTACAGTCTTCTTCTCGAAACCTATATTAAAGACTCGAACGATAAGAGTCGGTTGTTTCGCGCGATTGAGACCGTCCCCTGCGTCAAGAAGAAGGCCGATTGGGCGTTGAAGTGGATCGACAGCACTGAAACGTTCGCTGAACGTATTTTAGCCTTCGCTTGCGTTGAAGGAATCTTCTTCTCAGGTAGCTTCTGTTCCATTTTCTGGTTGAAGAAACGCGGGTTGATGCCTGGACTCACCTTCTCGAACGAGTTGATTTCGCGAGACGAAGGTCTTCATTGCGATTTCGCTTGTTTGTTGTATTCACTGCTGAGGAAGAAGTTGAGTGAGGATCGAGTGAAGGAGATTGTCACGGAGGCGGTGGATATAGAGAGGGAATTCGTGTGTGAGGCTTTGCCGGTGGCTCTCGTTGGTATGAATGGTGATTTGATGAGTCAGTACATTGAATTTGTAGCAGATAGGTTGGTTGGAGCTTTAGGGTATGGGAAAATCTATAATGCTCAGAATCCGTTCGATTGGATGGAGCTGATTTCGTTGCAAGGTAAGACGAATTTCTTCGAGAAGAGAGTTGGGGATTATCAGAAGGCGTCTGTGATGTCAAATTTGAATGGAAATGGCGACACGCATGAGTTTAAGATGGATGAAGATTTCTAA

mRNA sequence

ATGCCTGCAATTCCCGACGAGCCTCTCCTTGCCCCTAACCCCGACCGCTTTTGCATGTTCCCGATTCAGTATCCTCAAATCTGGGAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCTGAGGAAGTCGATCTCTCGCAGGACCTTCGCCATTGGGAATCTTTAACTTCCGATGAGAAGCACTTCATCACTCACGTTCTTGCGTTCTTCGCTGCCTCCGATGGCATCGTTTTGGAGAATCTCGCCGGGCGGTTCATGAAGGAAGTCCAAGTTGCTGAGGCTAGAGCCTTCTATGGATTCCAAATCGCCATCGAGAATATCCACTCGGAGATGTACAGTCTTCTTCTCGAAACCTATATTAAAGACTCGAACGATAAGAGTCGGTTGTTTCGCGCGATTGAGACCGTCCCCTGCGTCAAGAAGAAGGCCGATTGGGCGTTGAAGTGGATCGACAGCACTGAAACGTTCGCTGAACGTATTTTAGCCTTCGCTTGCGTTGAAGGAATCTTCTTCTCAGGTAGCTTCTGTTCCATTTTCTGGTTGAAGAAACGCGGGTTGATGCCTGGACTCACCTTCTCGAACGAGTTGATTTCGCGAGACGAAGGTCTTCATTGCGATTTCGCTTGTTTGTTGTATTCACTGCTGAGGAAGAAGTTGAGTGAGGATCGAGTGAAGGAGATTGTCACGGAGGCGGTGGATATAGAGAGGGAATTCGTGTGTGAGGCTTTGCCGGTGGCTCTCGTTGGTATGAATGGTGATTTGATGAGTCAGTACATTGAATTTGTAGCAGATAGGTTGGTTGGAGCTTTAGGGTATGGGAAAATCTATAATGCTCAGAATCCGTTCGATTGGATGGAGCTGATTTCGTTGCAAGGTAAGACGAATTTCTTCGAGAAGAGAGTTGGGGATTATCAGAAGGCGTCTGTGATGTCAAATTTGAATGGAAATGGCGACACGCATGAGTTTAAGATGGATGAAGATTTCTAA

Coding sequence (CDS)

ATGCCTGCAATTCCCGACGAGCCTCTCCTTGCCCCTAACCCCGACCGCTTTTGCATGTTCCCGATTCAGTATCCTCAAATCTGGGAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCTGAGGAAGTCGATCTCTCGCAGGACCTTCGCCATTGGGAATCTTTAACTTCCGATGAGAAGCACTTCATCACTCACGTTCTTGCGTTCTTCGCTGCCTCCGATGGCATCGTTTTGGAGAATCTCGCCGGGCGGTTCATGAAGGAAGTCCAAGTTGCTGAGGCTAGAGCCTTCTATGGATTCCAAATCGCCATCGAGAATATCCACTCGGAGATGTACAGTCTTCTTCTCGAAACCTATATTAAAGACTCGAACGATAAGAGTCGGTTGTTTCGCGCGATTGAGACCGTCCCCTGCGTCAAGAAGAAGGCCGATTGGGCGTTGAAGTGGATCGACAGCACTGAAACGTTCGCTGAACGTATTTTAGCCTTCGCTTGCGTTGAAGGAATCTTCTTCTCAGGTAGCTTCTGTTCCATTTTCTGGTTGAAGAAACGCGGGTTGATGCCTGGACTCACCTTCTCGAACGAGTTGATTTCGCGAGACGAAGGTCTTCATTGCGATTTCGCTTGTTTGTTGTATTCACTGCTGAGGAAGAAGTTGAGTGAGGATCGAGTGAAGGAGATTGTCACGGAGGCGGTGGATATAGAGAGGGAATTCGTGTGTGAGGCTTTGCCGGTGGCTCTCGTTGGTATGAATGGTGATTTGATGAGTCAGTACATTGAATTTGTAGCAGATAGGTTGGTTGGAGCTTTAGGGTATGGGAAAATCTATAATGCTCAGAATCCGTTCGATTGGATGGAGCTGATTTCGTTGCAAGGTAAGACGAATTTCTTCGAGAAGAGAGTTGGGGATTATCAGAAGGCGTCTGTGATGTCAAATTTGAATGGAAATGGCGACACGCATGAGTTTAAGATGGATGAAGATTTCTAA

Protein sequence

MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDEKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFVCEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEKRVGDYQKASVMSNLNGNGDTHEFKMDEDF

Homology

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BLAST of Carg09660 vs. NCBI nr
Match: XP_022935447.1 (ribonucleoside-diphosphate reductase small chain [Cucurbita moschata])

HSP 1 Score: 668.3 bits (1723), Expect = 1.3e-188
Identity = 327/329 (99.39%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE
Sbjct: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDSN+KSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVGDYQKASVMSNLNG+GDTHEFKMDEDF
Sbjct: 301 RVGDYQKASVMSNLNGHGDTHEFKMDEDF 329

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BLAST of Carg09660 vs. NCBI nr
Match: XP_023527500.1 (ribonucleoside-diphosphate reductase small chain [Cucurbita pepo subsp. pepo])

HSP 1 Score: 666.0 bits (1717), Expect = 6.6e-188
Identity = 326/329 (99.09%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE
Sbjct: 76  MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 135

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 136 KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 195

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDSN+KSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF
Sbjct: 196 IKDSNEKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 255

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL KKLSEDRVKEIVTEAVDIEREFV
Sbjct: 256 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLWKKLSEDRVKEIVTEAVDIEREFV 315

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK
Sbjct: 316 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 375

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVGDYQKASVMSNLNGNGDTHEFKMDEDF
Sbjct: 376 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 404

[Close]

BLAST of Carg09660 vs. NCBI nr
Match: XP_022984134.1 (ribonucleoside-diphosphate reductase small chain [Cucurbita maxima])

HSP 1 Score: 657.9 bits (1696), Expect = 1.8e-185
Identity = 322/329 (97.87%), Postives = 325/329 (98.78%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLT DE
Sbjct: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTFDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDSN+K+ LFRAIETVPCVKKKADWALKWIDS ETFAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKNLLFRAIETVPCVKKKADWALKWIDSPETFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNA NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNALNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVGDYQKASVMSNLNGNGDTHEFKMDEDF
Sbjct: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 329

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BLAST of Carg09660 vs. NCBI nr
Match: XP_004145693.1 (PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis sativus] >KGN58233.1 Ribonucleoside-diphosphate reductase small chain [Cucumis sativus])

HSP 1 Score: 638.6 bits (1646), Expect = 1.1e-179
Identity = 310/329 (94.22%), Postives = 320/329 (97.26%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP+IPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW+SLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDSN+K+RLF AI+TVPCVKKKADWALKWIDSTE+FAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRVKEIV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPVALVGMNGDLMSQYIEFVADRLVGALGY KIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVG+YQKASVMSNLNGNG  HEFKMDEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329

[Close]

BLAST of Carg09660 vs. NCBI nr
Match: XP_008450003.1 (PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis melo])

HSP 1 Score: 634.0 bits (1634), Expect = 2.8e-178
Identity = 307/329 (93.31%), Postives = 321/329 (97.57%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP+IPDEPLLAPNPDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLSQDLRHW+SLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSQDLRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIT+VLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQI IENIHSEMYSLLLETY
Sbjct: 61  KHFITYVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQICIENIHSEMYSLLLETY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDS++K+RLF AI+TVPCVKKKADWALKWIDST++FAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSSEKNRLFHAIDTVPCVKKKADWALKWIDSTDSFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRV++IVTEAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVRQIVTEAVDIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPVALVGMNGDLMSQYIEFVADRLVG LGY KIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGTLGYEKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVG+YQKASVMS+LNGNG  HEFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGIHEFKMDEDF 329

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BLAST of Carg09660 vs. TAIR10
Match: AT3G27060.1 (Ferritin/ribonucleotide reductase-like family protein)

HSP 1 Score: 570.9 bits (1470), Expect = 5.2e-163
Identity = 275/332 (82.83%), Postives = 301/332 (90.66%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-SLTSD 60
           MP++P+EPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE SL   
Sbjct: 1   MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60

Query: 61  EKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLET 120
           E+HFI HVLAFFAASDGIVLENLA RFM +VQV+EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSI 180
           YIKD+ ++  LFRAIET+PCV KKA WA+KWID ++TFAERI+AFACVEGIFFSGSFCSI
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KLSE+RVK IV +AV+IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240

Query: 241 VCEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFE 300
           VC+ALP ALVGMN DLMSQYIEFVADRL+GALGYGK+Y   NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGDYQKASVMSNLNGNG--DTHEFKMDEDF 330
           KRVGDYQKASVMS++NGNG  D H F +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332

[Close]

BLAST of Carg09660 vs. TAIR10
Match: AT3G23580.1 (ribonucleotide reductase 2A)

HSP 1 Score: 502.7 bits (1293), Expect = 1.8e-142
Identity = 241/324 (74.38%), Postives = 275/324 (84.88%), Query Frame = 0


Query: 6   DEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDEKHFIT 65
           +EPLL     RF MFPI+Y  IWEMYKKAEASFWTAEEVDLS D++ WE+LT  EKHFI+
Sbjct: 18  EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77

Query: 66  HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSN 125
           H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS 
Sbjct: 78  HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137

Query: 126 DKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIFWLKKR 185
           +K RLF AIET+PC+ KKA W L WI S  +FA R++AFACVEGIFFSGSFC+IFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197

Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFVCEALP 245
           GLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L  ++V +IV EAV+IE EFVC+ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257

Query: 246 VALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEKRVGDY 305
             L+GMN +LMSQYI+FVADRL+  LG  + Y A+NPFDWME ISLQGKTNFFEKRVG+Y
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317

Query: 306 QKASVMSNLNGNGDTHEFKMDEDF 330
           QKASVMSNL      +EF  +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341

[Close]

BLAST of Carg09660 vs. Swiss-Prot
Match: sp|P49730|RIR2_TOBAC (Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 7.2e-170
Identity = 287/329 (87.23%), Postives = 312/329 (94.83%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP IP+EPLLA +PDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLS D RHWE+LT  E
Sbjct: 1   MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           +HFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDS++KSRLFRA+ET PCV+KKA WAL+WID +ETFAER++AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+E+RVK IV +AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALP ALVGMNGDLMS+YIEFVADRL+ ALGY K+YNAQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVG+YQKASVMS+LNGNG THEFK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGATHEFKLDEDF 329

[Close]

BLAST of Carg09660 vs. Swiss-Prot
Match: sp|Q9LSD0|RIR2C_ARATH (Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana OX=3702 GN=TSO2 PE=1 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 9.4e-162
Identity = 275/332 (82.83%), Postives = 301/332 (90.66%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-SLTSD 60
           MP++P+EPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE SL   
Sbjct: 1   MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60

Query: 61  EKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLET 120
           E+HFI HVLAFFAASDGIVLENLA RFM +VQV+EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSI 180
           YIKD+ ++  LFRAIET+PCV KKA WA+KWID ++TFAERI+AFACVEGIFFSGSFCSI
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KLSE+RVK IV +AV+IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240

Query: 241 VCEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFE 300
           VC+ALP ALVGMN DLMSQYIEFVADRL+GALGYGK+Y   NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGDYQKASVMSNLNGNG--DTHEFKMDEDF 330
           KRVGDYQKASVMS++NGNG  D H F +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332

[Close]

BLAST of Carg09660 vs. Swiss-Prot
Match: sp|P0DKH3|RI2BL_ARATH (Ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana OX=3702 GN=RNR2B PE=2 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 1.1e-157
Identity = 266/333 (79.88%), Postives = 302/333 (90.69%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-SLTSD 60
           MP++P+EP+L P PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD R WE SLT+D
Sbjct: 1   MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60

Query: 61  EKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLET 120
           E+HFI HVLAFFAASDGIVLENL+ RFM +VQ++EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSI 180
           YIKD+ ++  LFRAIET+PCV KKA+WA+KWI+ +++FAERI+AFACVEGIFFSGSFCSI
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLR KL EDR+K IV +AV+IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREF 240

Query: 241 VCEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFE 300
           VC+ALP ALVGMN +LMSQYIEFVADRL+ ALG  K+Y   NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGDYQKASVMSNLNGN---GDTHEFKMDEDF 330
           KRVG+YQKAS+MS+++GN    D H FK+DEDF
Sbjct: 301 KRVGEYQKASIMSSVHGNAAFNDDHVFKLDEDF 333

[Close]

BLAST of Carg09660 vs. Swiss-Prot
Match: sp|P50651|RIR2A_ARATH (Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana OX=3702 GN=RNR2A PE=1 SV=2)

HSP 1 Score: 502.7 bits (1293), Expect = 3.2e-141
Identity = 241/324 (74.38%), Postives = 275/324 (84.88%), Query Frame = 0


Query: 6   DEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDEKHFIT 65
           +EPLL     RF MFPI+Y  IWEMYKKAEASFWTAEEVDLS D++ WE+LT  EKHFI+
Sbjct: 18  EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77

Query: 66  HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSN 125
           H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS 
Sbjct: 78  HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137

Query: 126 DKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIFWLKKR 185
           +K RLF AIET+PC+ KKA W L WI S  +FA R++AFACVEGIFFSGSFC+IFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197

Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFVCEALP 245
           GLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L  ++V +IV EAV+IE EFVC+ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257

Query: 246 VALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEKRVGDY 305
             L+GMN +LMSQYI+FVADRL+  LG  + Y A+NPFDWME ISLQGKTNFFEKRVG+Y
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317

Query: 306 QKASVMSNLNGNGDTHEFKMDEDF 330
           QKASVMSNL      +EF  +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341

[Close]

BLAST of Carg09660 vs. Swiss-Prot
Match: sp|Q4KLN6|RIR2_RAT (Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus OX=10116 GN=Rrm2 PE=2 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 2.4e-133
Identity = 234/329 (71.12%), Postives = 272/329 (82.67%), Query Frame = 0


Query: 2   PAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDEK 61
           P+I +EPLL  NP RF +FPI+Y  IW+MYKKAEASFWTAEEVDLS+D++HWE+L  DE+
Sbjct: 66  PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125

Query: 62  HFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
           HFI+HVLAFFAASDGIV ENL  RF +EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185

Query: 122 KDSNDKSRLFRAIETVPCVKKKADWALKWI-DSTETFAERILAFACVEGIFFSGSFCSIF 181
           KDS ++  LF AIET+PCVKKKADWAL+WI D   T+ ER++AFA VEGIFFSGSF SIF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245

Query: 182 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 241
           WLKKRGLMPGLTFSNELISRDEGLHCDFACL++  L  K SE RVKEI+T +V IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFL 305

Query: 242 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 301
            EALPV L+GMN  LM QYIEFVADRL+  LG+ KI+  +NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365

Query: 302 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVG+YQ+  VMSN   N     F +D DF
Sbjct: 366 RVGEYQRMGVMSNSTEN----SFTLDADF 390

[Close]

BLAST of Carg09660 vs. TrEMBL
Match: tr|A0A0A0L8R8|A0A0A0L8R8_CUCSA (Ribonucleoside-diphosphate reductase small chain OS=Cucumis sativus OX=3659 GN=Csa_3G597320 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 7.5e-180
Identity = 310/329 (94.22%), Postives = 320/329 (97.26%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP+IPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW+SLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDSN+K+RLF AI+TVPCVKKKADWALKWIDSTE+FAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRVKEIV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPVALVGMNGDLMSQYIEFVADRLVGALGY KIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVG+YQKASVMSNLNGNG  HEFKMDEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329

[Close]

BLAST of Carg09660 vs. TrEMBL
Match: tr|A0A1S3BNB8|A0A1S3BNB8_CUCME (ribonucleoside-diphosphate reductase small chain OS=Cucumis melo OX=3656 GN=LOC103491720 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 1.8e-178
Identity = 307/329 (93.31%), Postives = 321/329 (97.57%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP+IPDEPLLAPNPDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLSQDLRHW+SLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSQDLRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIT+VLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQI IENIHSEMYSLLLETY
Sbjct: 61  KHFITYVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQICIENIHSEMYSLLLETY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDS++K+RLF AI+TVPCVKKKADWALKWIDST++FAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSSEKNRLFHAIDTVPCVKKKADWALKWIDSTDSFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRV++IVTEAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVRQIVTEAVDIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPVALVGMNGDLMSQYIEFVADRLVG LGY KIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGTLGYEKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVG+YQKASVMS+LNGNG  HEFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGIHEFKMDEDF 329

[Close]

BLAST of Carg09660 vs. TrEMBL
Match: tr|A0A2J6KNY3|A0A2J6KNY3_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X26040 PE=4 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 9.4e-175
Identity = 296/329 (89.97%), Postives = 320/329 (97.26%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP+IP+EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLS+D RHW+SLT  E
Sbjct: 1   MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSEDQRHWDSLTDGE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           +HFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDSN+KSRLFRAIET+PCV+KKA+WALKWID +ETFAERI+AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSNEKSRLFRAIETIPCVEKKANWALKWIDGSETFAERIIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LL+ KLSE+RVK IV++AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLKTKLSEERVKGIVSDAVEIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALP ALVGMNGDLMS+YIEFVADRL+GALGYGK+YNAQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSEYIEFVADRLLGALGYGKLYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVG+YQKASVMSNLNGNGD+H FKMDEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGDSHVFKMDEDF 329

[Close]

BLAST of Carg09660 vs. TrEMBL
Match: tr|A0A2C9U7K6|A0A2C9U7K6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G103000 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 1.5e-172
Identity = 296/329 (89.97%), Postives = 315/329 (95.74%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIP+E LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE+LTSDE
Sbjct: 1   MPAIPEEQLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWETLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDSN+K+RLF AI+TVPCV KKA+WAL+WID +ETFAER++AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVAKKAEWALRWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLRKKLSE+RVK IV +AVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLRKKLSEERVKGIVRDAVDIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALP ALVGMNG+LMSQYIEFVADRL+ ALG GKIYN  NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLDALGCGKIYNVANPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVG+YQKA+VMS+LNGNG TH FKMDEDF
Sbjct: 301 RVGEYQKAAVMSSLNGNGGTHVFKMDEDF 329

[Close]

BLAST of Carg09660 vs. TrEMBL
Match: tr|B9RBH6|B9RBH6_RICCO (Ribonucleoside-diphosphate reductase small chain, putative OS=Ricinus communis OX=3988 GN=RCOM_1677000 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 5.7e-172
Identity = 293/329 (89.06%), Postives = 316/329 (96.05%), Query Frame = 0


Query: 1   MPAIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIP+EPLLAPNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQDLRHWESLT DE
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWESLTPDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFI+HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSNDKSRLFRAIETVPCVKKKADWALKWIDSTETFAERILAFACVEGIFFSGSFCSIF 180
           IKDSN+K+RLF AIETVPC+ KKA+WALKWID +E+FAERI+AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSNEKNRLFHAIETVPCIAKKAEWALKWIDGSESFAERIIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLL+KKLSE+RVK IV +AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLKKKLSEERVKGIVRDAVNIEREFV 240

Query: 241 CEALPVALVGMNGDLMSQYIEFVADRLVGALGYGKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALP ALVGMNG+LMSQYIEFVADRL+GALG GK YN  NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGCGKEYNVSNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSNLNGNGDTHEFKMDEDF 330
           RVG+YQKA+VMS++NGNG TH FKMDEDF
Sbjct: 301 RVGEYQKAAVMSSINGNGGTHVFKMDEDF 329

The following BLAST results are available for this feature:

BLAST of Carg09660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935447.1	1.3e-188	99.39	ribonucleoside-diphosphate reductase small chain [Cucurbita moschata]	[more]
XP_023527500.1	6.6e-188	99.09	ribonucleoside-diphosphate reductase small chain [Cucurbita pepo subsp. pepo]	[more]
XP_022984134.1	1.8e-185	97.87	ribonucleoside-diphosphate reductase small chain [Cucurbita maxima]	[more]
XP_004145693.1	1.1e-179	94.22	PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis sativus] >K...	[more]
XP_008450003.1	2.8e-178	93.31	PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis melo]	[more]

BLAST of Carg09660 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27060.1	5.2e-163	82.83	Ferritin/ribonucleotide reductase-like family protein	[more]
AT3G23580.1	1.8e-142	74.38	ribonucleotide reductase 2A	[more]

BLAST of Carg09660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P49730\|RIR2_TOBAC	7.2e-170	87.23	Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum OX=4097 PE...	[more]
sp\|Q9LSD0\|RIR2C_ARATH	9.4e-162	82.83	Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana OX=37...	[more]
sp\|P0DKH3\|RI2BL_ARATH	1.1e-157	79.88	Ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana OX=37...	[more]
sp\|P50651\|RIR2A_ARATH	3.2e-141	74.38	Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana OX=37...	[more]
sp\|Q4KLN6\|RIR2_RAT	2.4e-133	71.12	Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus OX=10116 GN...	[more]

BLAST of Carg09660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L8R8\|A0A0A0L8R8_CUCSA	7.5e-180	94.22	Ribonucleoside-diphosphate reductase small chain OS=Cucumis sativus OX=3659 GN=C...	[more]
tr\|A0A1S3BNB8\|A0A1S3BNB8_CUCME	1.8e-178	93.31	ribonucleoside-diphosphate reductase small chain OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A2J6KNY3\|A0A2J6KNY3_LACSA	9.4e-175	89.97	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X26040 PE=4 SV=1	[more]
tr\|A0A2C9U7K6\|A0A2C9U7K6_MANES	1.5e-172	89.97	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G103000 PE=4 SV=...	[more]
tr\|B9RBH6\|B9RBH6_RICCO	5.7e-172	89.06	Ribonucleoside-diphosphate reductase small chain, putative OS=Ricinus communis O...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009263	deoxyribonucleotide biosynthetic process
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR009078	Ferritin-like_SF
IPR033909	RNR_small
IPR030475	RNR_small_AS
IPR000358	RNR_small_fam
IPR012348	RNR-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009263	deoxyribonucleotide biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09660-RA	Carg09660-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012348	Ribonucleotide reductase-like	GENE3D	G3DSA:1.10.620.20		coord: 3..307 e-value: 4.3E-141 score: 471.5
IPR000358	Ribonucleotide reductase small subunit family	PFAM	PF00268	Ribonuc_red_sm	coord: 16..282 e-value: 6.9E-121 score: 402.9
IPR000358	Ribonucleotide reductase small subunit family	PANTHER	PTHR23409	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN	coord: 4..329
None	No IPR available	PANTHER	PTHR23409:SF31	SUBFAMILY NOT NAMED	coord: 4..329
IPR030475	Ribonucleotide reductase small subunit, acitve site	PROSITE	PS00368	RIBORED_SMALL	coord: 105..121
IPR033909	Ribonucleotide reductase small subunit	CDD	cd01049	RNRR2	coord: 17..291 e-value: 7.48322E-135 score: 386.981
IPR009078	Ferritin-like superfamily	SUPERFAMILY	SSF47240	Ferritin-like	coord: 5..307

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09660	CmaCh14G007200	Cucurbita maxima (Rimu)	carcmaB0607
Carg09660	CmoCh14G007350	Cucurbita moschata (Rifu)	carcmoB0592
Carg09660	Cp4.1LG03g06920	Cucurbita pepo (Zucchini)	carcpeB0613

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09660	Watermelon (97103) v2	carwmbB0459
Carg09660	Watermelon (97103) v2	carwmbB0460
Carg09660	Wax gourd	carwgoB0526
Carg09660	Silver-seed gourd	carcarB388
Carg09660	Silver-seed gourd	carcarB397
Carg09660	Cucumber (Gy14) v2	carcgybB0442
Carg09660	Cucumber (Gy14) v2	carcgybB0443
Carg09660	Cucumber (Gy14) v1	carcgyB0500
Carg09660	Cucurbita maxima (Rimu)	carcmaB0604
Carg09660	Cucurbita maxima (Rimu)	carcmaB0605
Carg09660	Cucurbita moschata (Rifu)	carcmoB0588
Carg09660	Cucurbita moschata (Rifu)	carcmoB0589
Carg09660	Cucurbita moschata (Rifu)	carcmoB0590
Carg09660	Cucurbita pepo (Zucchini)	carcpeB0610
Carg09660	Cucurbita pepo (Zucchini)	carcpeB0614
Carg09660	Wild cucumber (PI 183967)	carcpiB0471
Carg09660	Cucumber (Chinese Long) v2	carcuB0466
Carg09660	Cucumber (Chinese Long) v3	carcucB0466
Carg09660	Cucumber (Chinese Long) v3	carcucB0467
Carg09660	Bottle gourd (USVL1VR-Ls)	carlsiB397
Carg09660	Bottle gourd (USVL1VR-Ls)	carlsiB399
Carg09660	Melon (DHL92) v3.5.1	carmeB0442
Carg09660	Melon (DHL92) v3.5.1	carmeB0444
Carg09660	Melon (DHL92) v3.6.1	carmedB0446
Carg09660	Watermelon (Charleston Gray)	carwcgB0428
Carg09660	Watermelon (Charleston Gray)	carwcgB0430
Carg09660	Watermelon (97103) v1	carwmB0433
Carg09660	Watermelon (97103) v1	carwmB0437