Carg09652 (gene) Silver-seed gourd

Overview
NameCarg09652
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranscription factor, putative
LocationCucurbita_argyrosperma_scaffold_023 : 176310 .. 177269 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCTAAGACCTCATCAGCAACAAAGCAGCCCCAAGAAGTGGTACCCAACTTTTTGAAGCTCCCACAAGAACAGCAACAAGAACAACGACAAGAACAAGAACAAGAACAACGACAATCAATCATGGGTGAAAACAAACCAGCTGAAATCAAGGATTTCCAAATAGCAGTGGCAGAGAAAGAAGAGGGCAAAAAACAGTTAGCACCGAAAAGAAGCTCCAACAAAGACCGTCATACCAAAGTGGAAGGCAGAGGGCGAAGAATCCGGATGCCAGCTCTATGTGCGGCTAGGATTTTTCAATTAACCAGAGAATTGGGTCATAAATCTGACGGCGAGACCATTCAGTGGCTGCTACAGCAGGCGGAGCCGTCGATAATCGCCGTTACTGGCACTGGAACAATCCCAGCTTCTGCTCTTGCAGCGGCGGCGGGTTCCGTTTCGCAACAGGGGGCTTCTCTTTCCGCCGGATTGCACCAAAAATTGGAGGAATTTGGTGGTGGGGGGTCCAGTAGGGCCAATTGGGGCAATTTGGGGCGACCCCATTTGGCCGCCACAGCGACAACAGGGCTTTGGCCCTCATCTGTCAGTGGCTTTGGGTATCAGTCTTCAACAGCAGCAGCTGCTGCTGCTGCTGCTCAATCAGCCACTAATTTAGCTAATGAAACTTCAAATTACTTTCACAAACTTGGGTTCCCTCCCTTTGACTTAACCTCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGGAAACGCCCAACAATTACCTGGTTTGGAGCTTGGATTGTCTCAAGATGGTCATATTGGGGTCATAAATCCTCAAACACTGAACCAGATTTACCAACAGATGGGTCAAGCTAGAGTTCATCAGCATCATCATCAACACCAGCAGCAGCAGCAACAACAACAACAACAACCTCCTGCCAAGGATGATTCTCAAGATTCAGGCTAG

mRNA sequence

ATGGATCCTAAGACCTCATCAGCAACAAAGCAGCCCCAAGAAGTGGTACCCAACTTTTTGAAGCTCCCACAAGAACAGCAACAAGAACAACGACAAGAACAAGAACAAGAACAACGACAATCAATCATGGGTGAAAACAAACCAGCTGAAATCAAGGATTTCCAAATAGCAGTGGCAGAGAAAGAAGAGGGCAAAAAACAGTTAGCACCGAAAAGAAGCTCCAACAAAGACCGTCATACCAAAGTGGAAGGCAGAGGGCGAAGAATCCGGATGCCAGCTCTATGTGCGGCTAGGATTTTTCAATTAACCAGAGAATTGGGTCATAAATCTGACGGCGAGACCATTCAGTGGCTGCTACAGCAGGCGGAGCCGTCGATAATCGCCGTTACTGGCACTGGAACAATCCCAGCTTCTGCTCTTGCAGCGGCGGCGGGTTCCGTTTCGCAACAGGGGGCTTCTCTTTCCGCCGGATTGCACCAAAAATTGGAGGAATTTGGTGGTGGGGGGTCCAGTAGGGCCAATTGGGGCAATTTGGGGCGACCCCATTTGGCCGCCACAGCGACAACAGGGCTTTGGCCCTCATCTGTCAGTGGCTTTGGGTATCAGTCTTCAACAGCAGCAGCTGCTGCTGCTGCTGCTCAATCAGCCACTAATTTAGCTAATGAAACTTCAAATTACTTTCACAAACTTGGGTTCCCTCCCTTTGACTTAACCTCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGGAAACGCCCAACAATTACCTGGTTTGGAGCTTGGATTGTCTCAAGATGGTCATATTGGGGTCATAAATCCTCAAACACTGAACCAGATTTACCAACAGATGGGTCAAGCTAGAGTTCATCAGCATCATCATCAACACCAGCAGCAGCAGCAACAACAACAACAACAACCTCCTGCCAAGGATGATTCTCAAGATTCAGGCTAG

Coding sequence (CDS)

ATGGATCCTAAGACCTCATCAGCAACAAAGCAGCCCCAAGAAGTGGTACCCAACTTTTTGAAGCTCCCACAAGAACAGCAACAAGAACAACGACAAGAACAAGAACAAGAACAACGACAATCAATCATGGGTGAAAACAAACCAGCTGAAATCAAGGATTTCCAAATAGCAGTGGCAGAGAAAGAAGAGGGCAAAAAACAGTTAGCACCGAAAAGAAGCTCCAACAAAGACCGTCATACCAAAGTGGAAGGCAGAGGGCGAAGAATCCGGATGCCAGCTCTATGTGCGGCTAGGATTTTTCAATTAACCAGAGAATTGGGTCATAAATCTGACGGCGAGACCATTCAGTGGCTGCTACAGCAGGCGGAGCCGTCGATAATCGCCGTTACTGGCACTGGAACAATCCCAGCTTCTGCTCTTGCAGCGGCGGCGGGTTCCGTTTCGCAACAGGGGGCTTCTCTTTCCGCCGGATTGCACCAAAAATTGGAGGAATTTGGTGGTGGGGGGTCCAGTAGGGCCAATTGGGGCAATTTGGGGCGACCCCATTTGGCCGCCACAGCGACAACAGGGCTTTGGCCCTCATCTGTCAGTGGCTTTGGGTATCAGTCTTCAACAGCAGCAGCTGCTGCTGCTGCTGCTCAATCAGCCACTAATTTAGCTAATGAAACTTCAAATTACTTTCACAAACTTGGGTTCCCTCCCTTTGACTTAACCTCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGGAAACGCCCAACAATTACCTGGTTTGGAGCTTGGATTGTCTCAAGATGGTCATATTGGGGTCATAAATCCTCAAACACTGAACCAGATTTACCAACAGATGGGTCAAGCTAGAGTTCATCAGCATCATCATCAACACCAGCAGCAGCAGCAACAACAACAACAACAACCTCCTGCCAAGGATGATTCTCAAGATTCAGGCTAG

Protein sequence

MDPKTSSATKQPQEVVPNFLKLPQEQQQEQRQEQEQEQRQSIMGENKPAEIKDFQIAVAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGRPHLAATATTGLWPSSVSGFGYQSSTAAAAAAAAQSATNLANETSNYFHKLGFPPFDLTSTNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVHQHHHQHQQQQQQQQQQPPAKDDSQDSG
Homology
[Close]
BLAST of Carg09652 vs. NCBI nr
Match: XP_023528661.1 (transcription factor TCP20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 503.4 bits (1295), Expect = 5.5e-139
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQEVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE 60
           MDPKTSSATKQPQEVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE
Sbjct: 1   MDPKTSSATKQPQEVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE 60

Query: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120
           KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ
Sbjct: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120

Query: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR 180
           QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR
Sbjct: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR 180

Query: 181 PHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTST 240
           PHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTST
Sbjct: 181 PHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTST 240

Query: 241 NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 293
           NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH
Sbjct: 241 NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 292

[Close]
BLAST of Carg09652 vs. NCBI nr
Match: XP_022934366.1 (transcription factor TCP20-like [Cucurbita moschata])

HSP 1 Score: 499.2 bits (1284), Expect = 1.0e-137
Identity = 287/292 (98.29%), Postives = 287/292 (98.29%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQEVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE 60
           MDPKTSSATKQPQEVVPNFLKLPQ    XXXXXXXXXXXX IMGENKPAEIKDFQIAVAE
Sbjct: 1   MDPKTSSATKQPQEVVPNFLKLPQ----XXXXXXXXXXXXSIMGENKPAEIKDFQIAVAE 60

Query: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120
           KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ
Sbjct: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120

Query: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR 180
           QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR
Sbjct: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR 180

Query: 181 PHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTST 240
           PHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTST
Sbjct: 181 PHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTST 240

Query: 241 NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 293
           NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH
Sbjct: 241 NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 288

[Close]
BLAST of Carg09652 vs. NCBI nr
Match: XP_022983549.1 (transcription factor TCP20-like [Cucurbita maxima])

HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132
Identity = 285/292 (97.60%), Postives = 285/292 (97.60%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQEVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE 60
           MDPKTSS TKQPQEV   FLK   XXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE
Sbjct: 1   MDPKTSSVTKQPQEVETKFLK-XXXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE 60

Query: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120
           KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ
Sbjct: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120

Query: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR 180
           QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR
Sbjct: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGR 180

Query: 181 PHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTST 240
           PHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTST
Sbjct: 181 PHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTST 240

Query: 241 NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 293
           NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH
Sbjct: 241 NMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 291

[Close]
BLAST of Carg09652 vs. NCBI nr
Match: XP_004148022.1 (PREDICTED: transcription factor TCP20 [Cucumis sativus] >KGN58160.1 hypothetical protein Csa_3G564320 [Cucumis sativus])

HSP 1 Score: 440.3 bits (1131), Expect = 5.7e-120
Identity = 240/293 (81.91%), Postives = 244/293 (83.28%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQ-EVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVA 60
           MDPKTSS TKQPQ EVVPNF KL Q                 IMGENKPAEIKDFQIA+A
Sbjct: 1   MDPKTSSTTKQPQEEVVPNFFKLSQ---------EEAAEEVAIMGENKPAEIKDFQIAIA 60

Query: 61  EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLL 120
           EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTREL HKSDGETIQWLL
Sbjct: 61  EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLL 120

Query: 121 QQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLG 180
           QQAEPSIIA TGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEE GGGGSSRANW   G
Sbjct: 121 QQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANW---G 180

Query: 181 RPHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTS 240
           RPHLAAT  T LWPSSV+GFG+QS             TNL NETSNYFHKLGFPPFDLT 
Sbjct: 181 RPHLAAT-PTALWPSSVTGFGFQS-STAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTP 240

Query: 241 TNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 293
           TNMGPMSFTSILG N QQLPGLELGLSQDGHIGV+NPQ LNQIYQQMGQ RVH
Sbjct: 241 TNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVH 279

[Close]
BLAST of Carg09652 vs. NCBI nr
Match: XP_008450133.1 (PREDICTED: transcription factor TCP20 [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 2.2e-119
Identity = 239/293 (81.57%), Postives = 243/293 (82.94%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQ-EVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVA 60
           MDPKTSS TKQPQ EVVPNF KL +                 IMGENKPAEIKDFQIA+A
Sbjct: 1   MDPKTSSTTKQPQEEVVPNFFKLSE----------EVEEAEEIMGENKPAEIKDFQIAIA 60

Query: 61  EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLL 120
           EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTREL HKSDGETIQWLL
Sbjct: 61  EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLL 120

Query: 121 QQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLG 180
           QQAEPSIIA TGTGTIPASALA AAGSVSQQGASLSAGLHQKLEE GGGGSSRANW   G
Sbjct: 121 QQAEPSIIAATGTGTIPASALATAAGSVSQQGASLSAGLHQKLEELGGGGSSRANW---G 180

Query: 181 RPHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTS 240
           RPHLAAT  T LWPSSV+GFG+QS             TNL NETSNYFHKLGFPPFDLT 
Sbjct: 181 RPHLAAT-PTALWPSSVTGFGFQS-STAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTP 240

Query: 241 TNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 293
           TNMGPMSFTSILG N QQLPGLELGLSQDGHIGVINPQ LNQIYQQMGQ RVH
Sbjct: 241 TNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVINPQALNQIYQQMGQPRVH 278

[Close]
BLAST of Carg09652 vs. TAIR10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20)

HSP 1 Score: 216.5 bits (550), Expect = 2.4e-56
Identity = 140/252 (55.56%), Postives = 158/252 (62.70%), Query Frame = 0 

Query: 50  EIKDFQIAV--AEKEEGKK-----QLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL 109
           EIKDFQI V  ++KE  KK     QL PKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL
Sbjct: 46  EIKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL 105

Query: 110 TRELGHKSDGETIQWLLQQAEPSIIAVTGTGTIPASALA-AAAGSVSQQG---ASLSAGL 169
           TRELGHKSDGETIQWLLQQAEPSIIA TG+GTIPASALA +AA S   QG          
Sbjct: 106 TRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGXXXXXXXXXX 165

Query: 170 HQKLEEFGGGGSSRANWGNLGRPHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTN 229
                                           LWP +V+GFG                T 
Sbjct: 166 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWP-NVAGFG-----------SGVPTTG 225

Query: 230 LANETSNYFHKLGFPPFDLTSTNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQT 289
           L +E + Y  ++GFP FD     +G MSF SILGGN  Q+PGLELGLSQ+G++GV+NPQ+
Sbjct: 226 LMSEGAGY--RIGFPGFDF--PGVGHMSFASILGGNHNQMPGLELGLSQEGNVGVLNPQS 281

Query: 290 LNQIYQQMGQAR 291
             QIYQQMGQA+
Sbjct: 286 FTQIYQQMGQAQ 281

[Close]
BLAST of Carg09652 vs. TAIR10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 125.2 bits (313), Expect = 7.4e-29
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0 

Query: 71  KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVT 130
           KR+S KDRHTKV+GRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAEPS+IA T
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 131 GTGTIPASALAAAAGSVSQQGASLSAGLH 160
           GTGTIPA+   +   S+   G+S+S   H
Sbjct: 173 GTGTIPAN-FTSLNISLRSSGSSMSLPSH 200

[Close]
BLAST of Carg09652 vs. TAIR10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 0 

Query: 76  KDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVTGTGTI 135
           KDRHTKV+GRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAEP+I+A TGTGTI
Sbjct: 61  KDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTI 120

Query: 136 PASALAAAAGSVSQQGASLSA------------GL-HQKLEEFGGGG 170
           PA+  +  + S+   G++LSA            GL H + +E GGGG
Sbjct: 121 PAN-FSTLSVSLRSSGSTLSAPPSKSVPLYGALGLTHHQYDEQGGGG 166

[Close]
BLAST of Carg09652 vs. TAIR10
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 122.5 bits (306), Expect = 4.8e-28
Identity = 59/71 (83.10%), Postives = 66/71 (92.96%), Query Frame = 0 

Query: 71  KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVT 130
           KR+S KDRHTKVEGRGRRIRMPA CAARIFQLTRELGHKSDGETI+WLL+ AEP+IIA T
Sbjct: 71  KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAAT 130

Query: 131 GTGTIPASALA 142
           GTGT+PA A++
Sbjct: 131 GTGTVPAIAMS 141

[Close]
BLAST of Carg09652 vs. TAIR10
Match: AT5G51910.1 (TCP family transcription factor )

HSP 1 Score: 122.1 bits (305), Expect = 6.2e-28
Identity = 59/77 (76.62%), Postives = 70/77 (90.91%), Query Frame = 0 

Query: 65  KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 124
           K + APKR ++KDRHTKVEGRGRRIRMPA CAAR+FQLTRELGHKSDGETI+WLL++AEP
Sbjct: 47  KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106

Query: 125 SIIAVTGTGTIPASALA 142
           +II  TGTGT+PA A++
Sbjct: 107 AIIEATGTGTVPAIAVS 123

[Close]
BLAST of Carg09652 vs. Swiss-Prot
Match: sp|Q9LSD5|TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.4e-55
Identity = 140/252 (55.56%), Postives = 158/252 (62.70%), Query Frame = 0 

Query: 50  EIKDFQIAV--AEKEEGKK-----QLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL 109
           EIKDFQI V  ++KE  KK     QL PKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL
Sbjct: 46  EIKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQL 105

Query: 110 TRELGHKSDGETIQWLLQQAEPSIIAVTGTGTIPASALA-AAAGSVSQQG---ASLSAGL 169
           TRELGHKSDGETIQWLLQQAEPSIIA TG+GTIPASALA +AA S   QG          
Sbjct: 106 TRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGXXXXXXXXXX 165

Query: 170 HQKLEEFGGGGSSRANWGNLGRPHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTN 229
                                           LWP +V+GFG                T 
Sbjct: 166 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWP-NVAGFG-----------SGVPTTG 225

Query: 230 LANETSNYFHKLGFPPFDLTSTNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQT 289
           L +E + Y  ++GFP FD     +G MSF SILGGN  Q+PGLELGLSQ+G++GV+NPQ+
Sbjct: 226 LMSEGAGY--RIGFPGFDF--PGVGHMSFASILGGNHNQMPGLELGLSQEGNVGVLNPQS 281

Query: 290 LNQIYQQMGQAR 291
             QIYQQMGQA+
Sbjct: 286 FTQIYQQMGQAQ 281

[Close]
BLAST of Carg09652 vs. Swiss-Prot
Match: sp|Q93Z00|TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0 

Query: 71  KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVT 130
           KR+S KDRHTKV+GRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAEPS+IA T
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 131 GTGTIPASALAAAAGSVSQQGASLSAGLH 160
           GTGTIPA+   +   S+   G+S+S   H
Sbjct: 173 GTGTIPAN-FTSLNISLRSSGSSMSLPSH 200

[Close]
BLAST of Carg09652 vs. Swiss-Prot
Match: sp|Q9C518|TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.0e-27
Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 0 

Query: 76  KDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVTGTGTI 135
           KDRHTKV+GRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAEP+I+A TGTGTI
Sbjct: 61  KDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTI 120

Query: 136 PASALAAAAGSVSQQGASLSA------------GL-HQKLEEFGGGG 170
           PA+  +  + S+   G++LSA            GL H + +E GGGG
Sbjct: 121 PAN-FSTLSVSLRSSGSTLSAPPSKSVPLYGALGLTHHQYDEQGGGG 166

[Close]
BLAST of Carg09652 vs. Swiss-Prot
Match: sp|O64647|TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.6e-27
Identity = 59/71 (83.10%), Postives = 66/71 (92.96%), Query Frame = 0 

Query: 71  KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVT 130
           KR+S KDRHTKVEGRGRRIRMPA CAARIFQLTRELGHKSDGETI+WLL+ AEP+IIA T
Sbjct: 71  KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAAT 130

Query: 131 GTGTIPASALA 142
           GTGT+PA A++
Sbjct: 131 GTGTVPAIAMS 141

[Close]
BLAST of Carg09652 vs. Swiss-Prot
Match: sp|Q9LT89|TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-26
Identity = 59/77 (76.62%), Postives = 70/77 (90.91%), Query Frame = 0 

Query: 65  KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 124
           K + APKR ++KDRHTKVEGRGRRIRMPA CAAR+FQLTRELGHKSDGETI+WLL++AEP
Sbjct: 47  KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106

Query: 125 SIIAVTGTGTIPASALA 142
           +II  TGTGT+PA A++
Sbjct: 107 AIIEATGTGTVPAIAVS 123

[Close]
BLAST of Carg09652 vs. TrEMBL
Match: tr|A0A0A0L891|A0A0A0L891_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G564320 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 3.8e-120
Identity = 240/293 (81.91%), Postives = 244/293 (83.28%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQ-EVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVA 60
           MDPKTSS TKQPQ EVVPNF KL Q                 IMGENKPAEIKDFQIA+A
Sbjct: 1   MDPKTSSTTKQPQEEVVPNFFKLSQ---------EEAAEEVAIMGENKPAEIKDFQIAIA 60

Query: 61  EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLL 120
           EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTREL HKSDGETIQWLL
Sbjct: 61  EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLL 120

Query: 121 QQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLG 180
           QQAEPSIIA TGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEE GGGGSSRANW   G
Sbjct: 121 QQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEELGGGGSSRANW---G 180

Query: 181 RPHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTS 240
           RPHLAAT  T LWPSSV+GFG+QS             TNL NETSNYFHKLGFPPFDLT 
Sbjct: 181 RPHLAAT-PTALWPSSVTGFGFQS-STAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTP 240

Query: 241 TNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 293
           TNMGPMSFTSILG N QQLPGLELGLSQDGHIGV+NPQ LNQIYQQMGQ RVH
Sbjct: 241 TNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVLNPQALNQIYQQMGQPRVH 279

[Close]
BLAST of Carg09652 vs. TrEMBL
Match: tr|A0A1S3BNJ3|A0A1S3BNJ3_CUCME (transcription factor TCP20 OS=Cucumis melo OX=3656 GN=LOC103491806 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.4e-119
Identity = 239/293 (81.57%), Postives = 243/293 (82.94%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQ-EVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVA 60
           MDPKTSS TKQPQ EVVPNF KL +                 IMGENKPAEIKDFQIA+A
Sbjct: 1   MDPKTSSTTKQPQEEVVPNFFKLSE----------EVEEAEEIMGENKPAEIKDFQIAIA 60

Query: 61  EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLL 120
           EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTREL HKSDGETIQWLL
Sbjct: 61  EKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELDHKSDGETIQWLL 120

Query: 121 QQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLG 180
           QQAEPSIIA TGTGTIPASALA AAGSVSQQGASLSAGLHQKLEE GGGGSSRANW   G
Sbjct: 121 QQAEPSIIAATGTGTIPASALATAAGSVSQQGASLSAGLHQKLEELGGGGSSRANW---G 180

Query: 181 RPHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFPPFDLTS 240
           RPHLAAT  T LWPSSV+GFG+QS             TNL NETSNYFHKLGFPPFDLT 
Sbjct: 181 RPHLAAT-PTALWPSSVTGFGFQS-STAAAAVAAQSATNLPNETSNYFHKLGFPPFDLTP 240

Query: 241 TNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVH 293
           TNMGPMSFTSILG N QQLPGLELGLSQDGHIGVINPQ LNQIYQQMGQ RVH
Sbjct: 241 TNMGPMSFTSILGANTQQLPGLELGLSQDGHIGVINPQALNQIYQQMGQPRVH 278

[Close]
BLAST of Carg09652 vs. TrEMBL
Match: tr|F6H463|F6H463_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g01690 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 2.7e-102
Identity = 215/299 (71.91%), Postives = 231/299 (77.26%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQEVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE 60
           MDPK S   KQPQE VPNFL LPQ                  MGENKPAE+KDFQI +A+
Sbjct: 1   MDPKGS---KQPQE-VPNFLSLPQPN----------------MGENKPAEVKDFQIVIAD 60

Query: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120
           KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ
Sbjct: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120

Query: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFG----GGGSSRANW- 180
           QAEPSIIA TGTGTIPASALAAA GSVSQQG S+SAGLHQK++E G    G GSSR +W 
Sbjct: 121 QAEPSIIAATGTGTIPASALAAAGGSVSQQGTSISAGLHQKIDELGGSSIGSGSSRTSWA 180

Query: 181 ---GNLGRPHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGF 240
               NLGRPH+A    TGLWP  VSGFG+QS             TNL NE+SNY  K+ F
Sbjct: 181 MVGANLGRPHVA----TGLWP-PVSGFGFQS-------SSGPSTTNLGNESSNYLQKIAF 240

Query: 241 PPFDLTSTNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARV 292
           P FDL +TN+GPMSFTSILGG+ QQLPGLELGLSQDGHIGV+N Q L+QIYQQMGQARV
Sbjct: 241 PGFDLPATNLGPMSFTSILGGSNQQLPGLELGLSQDGHIGVLNSQALSQIYQQMGQARV 267

[Close]
BLAST of Carg09652 vs. TrEMBL
Match: tr|A0A2N9IAC0|A0A2N9IAC0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50789 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 3.6e-102
Identity = 230/298 (77.18%), Postives = 244/298 (81.88%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQEVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE 60
           MDPK S+A KQP + VPNFL L  XXXXXXXXXXXXXXXXX MGENKPAEIKDFQI +A+
Sbjct: 1   MDPKGSTA-KQPPQGVPNFLSLXXXXXXXXXXXXXXXXXXXXMGENKPAEIKDFQIVIAD 60

Query: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120
           KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ
Sbjct: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120

Query: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGG---GGSSRANW-- 180
           QAEPSIIA TGTGTIPASALAAA  SVSQQG SLSAGLHQK++E GG   G  SR +W  
Sbjct: 121 QAEPSIIAATGTGTIPASALAAAGASVSQQGTSLSAGLHQKIDELGGSSIGSGSRTSWPM 180

Query: 181 --GNLGRPHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFP 240
             GNLGRPH+     TGLWP  VSGFG+QS             TNLA E+SNY  K+GF 
Sbjct: 181 VGGNLGRPHV----PTGLWP-PVSGFGFQS-------SSGPSTTNLATESSNYLQKIGFS 240

Query: 241 PFDLTSTNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARV 292
            FDL  TNMGPMSFTSILGG  QQLPGLELGLSQDGHIGV++PQ L+QIYQQMGQARV
Sbjct: 241 GFDLPPTNMGPMSFTSILGGTNQQLPGLELGLSQDGHIGVLSPQALSQIYQQMGQARV 285

[Close]
BLAST of Carg09652 vs. TrEMBL
Match: tr|A0A2I4DY73|A0A2I4DY73_9ROSI (transcription factor TCP20-like OS=Juglans regia OX=51240 GN=LOC108984550 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.1e-102
Identity = 215/298 (72.15%), Postives = 231/298 (77.52%), Query Frame = 0 

Query: 1   MDPKTSSATKQPQEVVPNFLKLPQXXXXXXXXXXXXXXXXXIMGENKPAEIKDFQIAVAE 60
           MDPK S+  KQPQ+ VPNFL LPQ                  MGENKPAEIKDFQI +A+
Sbjct: 1   MDPKGSTTAKQPQQ-VPNFLSLPQPQQQPN------------MGENKPAEIKDFQIVIAD 60

Query: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120
           KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ
Sbjct: 61  KEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQ 120

Query: 121 QAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGG---GGSSRANW-- 180
           QAEPSIIA TGTGTIPASALAAA GSVSQQGASLSAGLHQK+++ GG   G  SR +W  
Sbjct: 121 QAEPSIIAATGTGTIPASALAAAGGSVSQQGASLSAGLHQKIDDLGGSSIGLGSRTSWAM 180

Query: 181 --GNLGRPHLAATATTGLWPSSVSGFGYQSXXXXXXXXXXXXXTNLANETSNYFHKLGFP 240
             GNLGRPH+A    TGLWP  VSGFG+QS              NL +E+SNY  K+GFP
Sbjct: 181 VGGNLGRPHVA----TGLWP-PVSGFGFQS-------SSGPSTANLGSESSNYLQKIGFP 240

Query: 241 PFDLTSTNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARV 292
            FDL +T   PMSFTSILGGN QQLPGLELGLSQDGHIGV+NPQ L+QIYQQMGQARV
Sbjct: 241 GFDLPAT---PMSFTSILGGNNQQLPGLELGLSQDGHIGVLNPQALSQIYQQMGQARV 270

The following BLAST results are available for this feature:
BLAST of Carg09652 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023528661.15.5e-139100.00transcription factor TCP20-like [Cucurbita pepo subsp. pepo][more]
XP_022934366.11.0e-13798.29transcription factor TCP20-like [Cucurbita moschata][more]
XP_022983549.11.0e-13297.60transcription factor TCP20-like [Cucurbita maxima][more]
XP_004148022.15.7e-12081.91PREDICTED: transcription factor TCP20 [Cucumis sativus] >KGN58160.1 hypothetical... [more]
XP_008450133.12.2e-11981.57PREDICTED: transcription factor TCP20 [Cucumis melo][more]
BLAST of Carg09652 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27010.12.4e-5655.56TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20[more]
AT3G47620.17.4e-2973.03TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14[more]
AT1G58100.11.6e-2864.49TCP family transcription factor [more]
AT2G45680.14.8e-2883.10TCP family transcription factor [more]
AT5G51910.16.2e-2876.62TCP family transcription factor [more]
BLAST of Carg09652 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LSD5|TCP20_ARATH4.4e-5555.56Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1[more]
sp|Q93Z00|TCP14_ARATH1.3e-2773.03Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1[more]
sp|Q9C518|TCP8_ARATH3.0e-2764.49Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1[more]
sp|O64647|TCP9_ARATH8.6e-2783.10Transcription factor TCP9 OS=Arabidopsis thaliana OX=3702 GN=TCP9 PE=1 SV=1[more]
sp|Q9LT89|TCP19_ARATH1.1e-2676.62Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1[more]
BLAST of Carg09652 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L891|A0A0A0L891_CUCSA3.8e-12081.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G564320 PE=4 SV=1[more]
tr|A0A1S3BNJ3|A0A1S3BNJ3_CUCME1.4e-11981.57transcription factor TCP20 OS=Cucumis melo OX=3656 GN=LOC103491806 PE=4 SV=1[more]
tr|F6H463|F6H463_VITVI2.7e-10271.91Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g01690 PE=4 SV=... [more]
tr|A0A2N9IAC0|A0A2N9IAC0_FAGSY3.6e-10277.18Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50789 PE=4 SV=1[more]
tr|A0A2I4DY73|A0A2I4DY73_9ROSI6.1e-10272.15transcription factor TCP20-like OS=Juglans regia OX=51240 GN=LOC108984550 PE=4 S... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017887TF_TCP_subgr
IPR005333Transcription_factor_TCP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09652-RACarg09652-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 74..283
e-value: 3.2E-32
score: 112.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..319
NoneNo IPR availablePANTHERPTHR31072:SF4TRANSCRIPTION FACTOR TCP20coord: 1..310
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 1..310
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 75..129
score: 27.543

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09652Cla002099Watermelon (97103) v1carwmB0433
Carg09652Csa3G564320Cucumber (Chinese Long) v2carcuB0466
Carg09652MELO3C014903Melon (DHL92) v3.5.1carmeB0444
Carg09652ClCG05G013720Watermelon (Charleston Gray)carwcgB0428
Carg09652CSPI03G25370Wild cucumber (PI 183967)carcpiB0471
Carg09652Cucsa.054000Cucumber (Gy14) v1carcgyB0500
Carg09652CmaCh14G007300Cucurbita maxima (Rimu)carcmaB0607
Carg09652CmaCh11G015200Cucurbita maxima (Rimu)carcmaB0605
Carg09652CmoCh14G007440Cucurbita moschata (Rifu)carcmoB0592
Carg09652CmoCh11G016020Cucurbita moschata (Rifu)carcmoB0589
Carg09652Lsi07G014910Bottle gourd (USVL1VR-Ls)carlsiB399
Carg09652Cp4.1LG03g06980Cucurbita pepo (Zucchini)carcpeB0613
Carg09652Cp4.1LG04g06060Cucurbita pepo (Zucchini)carcpeB0614
Carg09652CsGy3G023810Cucumber (Gy14) v2carcgybB0443
Carg09652MELO3C014903.2Melon (DHL92) v3.6.1carmedB0446
Carg09652CsaV3_3G026870Cucumber (Chinese Long) v3carcucB0467
Carg09652Cla97C05G095220Watermelon (97103) v2carwmbB0459
Carg09652Bhi01G001628Wax gourdcarwgoB0526
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg09652Carg15550Silver-seed gourdcarcarB397
The following block(s) are covering this gene:
GeneOrganismBlock
Carg09652Cucurbita moschata (Rifu)carcmoB0588
Carg09652Cucurbita moschata (Rifu)carcmoB0590
Carg09652Cucurbita pepo (Zucchini)carcpeB0610
Carg09652Cucumber (Chinese Long) v3carcucB0466
Carg09652Bottle gourd (USVL1VR-Ls)carlsiB397
Carg09652Melon (DHL92) v3.5.1carmeB0442
Carg09652Watermelon (Charleston Gray)carwcgB0430
Carg09652Watermelon (97103) v1carwmB0437
Carg09652Watermelon (97103) v2carwmbB0460
Carg09652Silver-seed gourdcarcarB388
Carg09652Cucumber (Gy14) v2carcgybB0442
Carg09652Cucurbita maxima (Rimu)carcmaB0604