Carg09647 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09647
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pollen Ole e 1 allergen/extensin
Location	Cucurbita_argyrosperma_scaffold_023 : 165955 .. 166846 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCTGATTCTACTCTTAGTCTTAGCTTCCTTGGTTTCAAGTTCCCTTGTGTTGGGAATTCAGGCTGTTCATTCCCACCACTCAAGAATATTTTCTCAGATTACTGTTATGGGCCTTGTTTATTGTGACACCTGCTCCAACAATTCCTTCTCCAAGCACAGTTACTTCTTACCAGGTAATGCCCTAATTCATTTCTTCATACTATGTTGTTACTCGAGTAAGCTAAAGCTTAAGTTTAAGTCCTGAGTTCAACAAATTGAACCTGGACGAGACTTCAAATGGCAAAACTAGTGTCTAAGTGTTGCATAGTCTTCTTCAGCGTTTTGATTTTGAGTTTGAACTTTTTCGTTTTCGCAGCTTTGATGTTATGGTTGGAATTGAATGTCTACTTTGTTGATTTCTTGTGTGGTTTCTAACGAGATTTAAAGTGTTCTGTTGATTAGATTTTGAGTAACCTAATTTCTAAAATAGCATTGATTCAATTCAACCACTTATTCAAAGAATGATTGAGAAAATTTCTTTGTTTATAAACGAAACAAAAAATTAAACAGGTGCAGAAGTTCGAATCGACTGCAAATTAAAAGCAGAAACGCCGCGTACAGCGGAGCAAATAGCATTCTCAGTGAACAGAACAACAAACAAAAACGGAGTTTACAAATTGGAAATACCTTCGATGGACGGAATCCGATGTGCAGAGGATTCCTCAATGGCGTCGTTCTGCCAAGCGAGTTTGATGGGAAGTTCGTCGTCCGCTTGCAACGTTCCTGGATACAGAACCACATCGGGAGAAATTTCAATCAAATCGAGACAGTCAAACGTTTGCATTTACAGCTTAAATCCGCTGAATTACAGGCCATCAACAAGAGACGATATCTTGTGCGGGAATTAG

mRNA sequence

ATGAATCTGATTCTACTCTTAGTCTTAGCTTCCTTGGTTTCAAGTTCCCTTGTGTTGGGAATTCAGGCTGTTCATTCCCACCACTCAAGAATATTTTCTCAGATTACTGTTATGGGCCTTGTTTATTGTGACACCTGCTCCAACAATTCCTTCTCCAAGCACAGTTACTTCTTACCAGGTGCAGAAGTTCGAATCGACTGCAAATTAAAAGCAGAAACGCCGCGTACAGCGGAGCAAATAGCATTCTCAGTGAACAGAACAACAAACAAAAACGGAGTTTACAAATTGGAAATACCTTCGATGGACGGAATCCGATGTGCAGAGGATTCCTCAATGGCGTCGTTCTGCCAAGCGAGTTTGATGGGAAGTTCGTCGTCCGCTTGCAACGTTCCTGGATACAGAACCACATCGGGAGAAATTTCAATCAAATCGAGACAGTCAAACGTTTGCATTTACAGCTTAAATCCGCTGAATTACAGGCCATCAACAAGAGACGATATCTTGTGCGGGAATTAG

Coding sequence (CDS)

ATGAATCTGATTCTACTCTTAGTCTTAGCTTCCTTGGTTTCAAGTTCCCTTGTGTTGGGAATTCAGGCTGTTCATTCCCACCACTCAAGAATATTTTCTCAGATTACTGTTATGGGCCTTGTTTATTGTGACACCTGCTCCAACAATTCCTTCTCCAAGCACAGTTACTTCTTACCAGGTGCAGAAGTTCGAATCGACTGCAAATTAAAAGCAGAAACGCCGCGTACAGCGGAGCAAATAGCATTCTCAGTGAACAGAACAACAAACAAAAACGGAGTTTACAAATTGGAAATACCTTCGATGGACGGAATCCGATGTGCAGAGGATTCCTCAATGGCGTCGTTCTGCCAAGCGAGTTTGATGGGAAGTTCGTCGTCCGCTTGCAACGTTCCTGGATACAGAACCACATCGGGAGAAATTTCAATCAAATCGAGACAGTCAAACGTTTGCATTTACAGCTTAAATCCGCTGAATTACAGGCCATCAACAAGAGACGATATCTTGTGCGGGAATTAG

Protein sequence

MNLILLLVLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLPGAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQASLMGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN

Homology

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BLAST of Carg09647 vs. NCBI nr
Match: XP_022934369.1 (major pollen allergen Ole e 1-like [Cucurbita moschata])

HSP 1 Score: 332.8 bits (852), Expect = 6.9e-88
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MNLILLLVLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLPG 60
           MNLILLLVLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLPG
Sbjct: 1   MNLILLLVLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLPG 60

Query: 61  AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQASL 120
           AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSM SFCQASL
Sbjct: 61  AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMVSFCQASL 120

Query: 121 MGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 172
           MGSSSSACNVPGY+TTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN
Sbjct: 121 MGSSSSACNVPGYKTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 171

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BLAST of Carg09647 vs. NCBI nr
Match: XP_023527407.1 (major pollen allergen Ole e 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.2 bits (840), Expect = 1.7e-86
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MNLILLLVLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLPG 60
           MNLILL VLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFL G
Sbjct: 1   MNLILLFVLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLSG 60

Query: 61  AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQASL 120
           AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSM SFCQASL
Sbjct: 61  AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMVSFCQASL 120

Query: 121 MGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 172
           MGSSSSACNVPGY+TTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN
Sbjct: 121 MGSSSSACNVPGYKTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 171

[Close]

BLAST of Carg09647 vs. NCBI nr
Match: XP_022983553.1 (major pollen allergen Ole e 1-like [Cucurbita maxima])

HSP 1 Score: 325.1 bits (832), Expect = 1.4e-85
Identity = 165/171 (96.49%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MNLILLLVLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLPG 60
           MNLILL VLASLVSSSLVLGIQA HSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFL G
Sbjct: 1   MNLILLFVLASLVSSSLVLGIQAAHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLSG 60

Query: 61  AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQASL 120
           AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSM SFCQASL
Sbjct: 61  AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMVSFCQASL 120

Query: 121 MGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 172
           MGSSSSACNVPGY++TSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN
Sbjct: 121 MGSSSSACNVPGYKSTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 171

[Close]

BLAST of Carg09647 vs. NCBI nr
Match: XP_008450135.1 (PREDICTED: major pollen allergen Ole e 1-like [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 9.3e-77
Identity = 151/172 (87.79%), Postives = 160/172 (93.02%), Query Frame = 0


Query: 1   MNLILLLVLASLVSSSLVLGIQAVHSHHSR-IFSQITVMGLVYCDTCSNNSFSKHSYFLP 60
           MNLILL VLASLV SS +  IQA HSH  R I+SQITVMGLVYCDTCSNN+FSKHSYFL 
Sbjct: 1   MNLILLFVLASLVPSSFLFEIQAAHSHPPRTIYSQITVMGLVYCDTCSNNTFSKHSYFLS 60

Query: 61  GAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQAS 120
           GAEVRIDCKLKAETPRTAEQIAFSVNRTTNK GVYKLEIPS+DGIRCAEDS+M SFCQAS
Sbjct: 61  GAEVRIDCKLKAETPRTAEQIAFSVNRTTNKYGVYKLEIPSVDGIRCAEDSAMVSFCQAS 120

Query: 121 LMGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 172
           LMGSSSS+CNVPGYR+TSGEISIKSRQSN+CIYSLNPLNY+PSTRDDILCGN
Sbjct: 121 LMGSSSSSCNVPGYRSTSGEISIKSRQSNICIYSLNPLNYKPSTRDDILCGN 172

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BLAST of Carg09647 vs. NCBI nr
Match: XP_004148007.1 (PREDICTED: major pollen allergen Ole e 1 [Cucumis sativus] >KGN58156.1 hypothetical protein Csa_3G563290 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 1.5e-74
Identity = 148/172 (86.05%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 1   MNLILLLVLASLVSSSLVLGIQAVHSHHSR-IFSQITVMGLVYCDTCSNNSFSKHSYFLP 60
           MN ILL VLASLV S  +  I+A HSH  R  +SQITVMGLVYCDTCSNN+FSKHSYFL 
Sbjct: 1   MNHILLFVLASLVPSFFLFEIKAAHSHPPRTTYSQITVMGLVYCDTCSNNTFSKHSYFLS 60

Query: 61  GAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQAS 120
           GAEVRIDCKLKAETPRTAEQIAFSVNRTTNK GVYKLEIPS+DGIRCAEDS+M SFCQAS
Sbjct: 61  GAEVRIDCKLKAETPRTAEQIAFSVNRTTNKYGVYKLEIPSVDGIRCAEDSAMVSFCQAS 120

Query: 121 LMGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 172
           LMGSSSS+CNVPGYR+TSGEISIKSRQSN+CIYSLNPLNYRPSTRDDILCGN
Sbjct: 121 LMGSSSSSCNVPGYRSTSGEISIKSRQSNICIYSLNPLNYRPSTRDDILCGN 172

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BLAST of Carg09647 vs. TAIR10
Match: AT5G41050.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 168.3 bits (425), Expect = 4.1e-42
Identity = 81/141 (57.45%), Postives = 105/141 (74.47%), Query Frame = 0


Query: 34  QITVMGLVYCDTCSNNSFSKHSYFLPGAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGV 93
           +ITVMGLVYCD CSNNSFS HSYF+PG EVRI C+  + + RT E I FS NRTTN+ G+
Sbjct: 32  KITVMGLVYCDVCSNNSFSNHSYFIPGVEVRIICRFNSASSRTREMITFSANRTTNELGL 91

Query: 94  YKLEIPSMDGIRCA----EDSSMASFCQASLMGSSSSACNVPGYRTTSGEISIKSRQSNV 153
           YKL+I S++G+ CA    +DS MAS CQASL+G S  +CNVPG+RTT+ ++  KS+ SN+
Sbjct: 92  YKLDITSLEGVACAAEAKKDSLMAS-CQASLIGRSKDSCNVPGFRTTTEQVVFKSKISNL 151

Query: 154 CIYSLNPLNYRPSTRDDILCG 171
           C+Y    LN+RP  ++  LCG
Sbjct: 152 CVYGFTALNFRPLEKNLHLCG 171

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BLAST of Carg09647 vs. TAIR10
Match: AT5G13140.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 165.2 bits (417), Expect = 3.4e-41
Identity = 75/142 (52.82%), Postives = 108/142 (76.06%), Query Frame = 0


Query: 33  SQITVMGLVYCDTCSNNSFSKHSYFLPGAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNG 92
           S+ITV+G+VYCDTCS N+FS+ SYFL G EV + C+ KA +P+TAE++  SVNRTTN++G
Sbjct: 37  SRITVVGVVYCDTCSINTFSRQSYFLQGVEVHVTCRFKASSPKTAEEVNISVNRTTNRSG 96

Query: 93  VYKLEIPSMDGIRCAEDSSMASFCQASLMGSSS---SACNVPGYRTTSGEISIKSRQSNV 152
           VYKLEIP +DGI C +  +++S C A ++ +SS     C++P ++T + E+SIKS+Q  V
Sbjct: 97  VYKLEIPHVDGIDCVDGIAISSQCSAKILKTSSDDNGGCSIPVFQTATNEVSIKSKQDRV 156

Query: 153 CIYSLNPLNYRPSTRDDILCGN 172
           CIYSL+ L+Y+P  ++  LCGN
Sbjct: 157 CIYSLSALSYKPPHKNTSLCGN 178

[Close]

BLAST of Carg09647 vs. TAIR10
Match: AT3G26960.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 163.7 bits (413), Expect = 1.0e-40
Identity = 88/170 (51.76%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 5   LLLVLASLVSSSLVLGIQAVHSH-HSRIFSQITVMGLVYCDTCSNNSFSKHSYFLPGAEV 64
           L + L  L+   LV  + + HS    +  ++IT+MG VYCD CS NSFSKHSYF+ G EV
Sbjct: 6   LTMFLFILLQFLLVNSLSSKHSSPKPKPDAEITIMGFVYCDVCSKNSFSKHSYFMSGVEV 65

Query: 65  RIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQASLMGS 124
           RI C+ KA +  T E I FS NRTTN+ G+YK+ I S+D   CA+  S+AS CQASL+G 
Sbjct: 66  RIVCRFKAASSTTTETITFSANRTTNEFGLYKVAISSLD---CADVDSLASSCQASLIGR 125

Query: 125 ---SSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCG 171
              S S+CN+PGYRTT+ ++  KS+QSN C+Y  N LN+RP  RD  LCG
Sbjct: 126 KNFSDSSCNIPGYRTTTDQVLFKSQQSNSCVYGFNALNFRPFKRDLALCG 172

[Close]

BLAST of Carg09647 vs. TAIR10
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 43/166 (25.90%), Postives = 76/166 (45.78%), Query Frame = 0


Query: 5   LLLVLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKH-SYFLPGAEV 64
           L++ L   ++  L  G Q V     +  S   V+G VYCDTC N +FSK  ++ + GA V
Sbjct: 13  LMIFLGISINGGLSQGQQHV---MKKTRSSAVVVGTVYCDTCFNGAFSKSPNHLISGALV 72

Query: 65  RIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQASLMGS 124
            ++C  +   P   +++       T+K G +K+++P       ++       C   L+ S
Sbjct: 73  AVECIDENSKPSFRQEV------KTDKRGEFKVKLP----FSVSKHVKKIKRCSVKLLSS 132

Query: 125 SSSACNVPGYRTTSGEISIKSRQ--SNVCIYSLNPLNYRPSTRDDI 168
           S   C++    T+S    +KS     N  ++S     +RP  + +I
Sbjct: 133 SQPYCSIASSATSSSLKRLKSNHHGENTRVFSAGFFTFRPENQPEI 165

[Close]

BLAST of Carg09647 vs. TAIR10
Match: AT5G45880.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 51.2 bits (121), Expect = 7.3e-07
Identity = 37/137 (27.01%), Postives = 60/137 (43.80%), Query Frame = 0


Query: 32  FSQITVMGLVYCDTCSNNSFSKHSYFLPGAEVRIDCKLKAETPRTAEQIAFSVNRTTNKN 91
           F +  + G VYCDTC     ++ S FL GA+V+++C+      RT   I  +    T+K 
Sbjct: 32  FDRFQIQGSVYCDTCRVQFVTRLSKFLEGAKVKLECR-----SRTNGTITLTKEAVTDKT 91

Query: 92  GVYKLEIPSMDGIRCAEDSSMASFCQASLMGSSSSAC---NVPGYRTTSGEISIKSRQSN 151
           G YK+E+                 C+  L+ S  S C   +   Y   + +IS+ +    
Sbjct: 92  GSYKMEVTG---------DHEEEVCELVLVQSPDSGCSDVSTEAYLRNAAKISLTANDGI 151

Query: 152 VCIYS--LNPLNYRPST 164
           V   +  +NPL +   T
Sbjct: 152 VSHETRIVNPLGFMVQT 154

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BLAST of Carg09647 vs. Swiss-Prot
Match: sp|P19963|ALL1_OLEEU (Major pollen allergen Ole e 1 OS=Olea europaea OX=4146 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-06
Identity = 35/128 (27.34%), Postives = 55/128 (42.97%), Query Frame = 0


Query: 33  SQITVMGLVYCDTCSNNSFSKHSYFLPGAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNG 92
           SQ  + G VYCDTC     ++ S F+PGA +R+ CK K     T  ++ +     T   G
Sbjct: 9   SQFHIQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGY-----TRAEG 68

Query: 93  VYKLEIPSMDGIRCAEDSSMASFCQASLMGSSSSACN-VPGYRTTSGEISIKSRQSNVCI 152
           +Y + +         E      FC+ +L+ S    CN +P        +  K    N   
Sbjct: 69  LYSMLV---------ERDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTT 122

Query: 153 YSLNPLNY 160
            ++NPL +
Sbjct: 129 RTVNPLGF 122

[Close]

BLAST of Carg09647 vs. Swiss-Prot
Match: sp|O82015|LIGV1_LIGVU (Major pollen allergen Lig v 1 OS=Ligustrum vulgare OX=13597 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 3.8e-05
Identity = 35/128 (27.34%), Postives = 54/128 (42.19%), Query Frame = 0


Query: 33  SQITVMGLVYCDTCSNNSFSKHSYFLPGAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNG 92
           SQ  + G VYCDTC     ++ S F+PGA VR+ CK       T  ++ +     T   G
Sbjct: 9   SQFYIQGQVYCDTCRARFITELSEFIPGAGVRLQCKDGENGKVTFTEVGY-----TKAEG 68

Query: 93  VYKLEIPSMDGIRCAEDSSMASFCQASLMGSSSSACN-VPGYRTTSGEISIKSRQSNVCI 152
           +Y + I         E      FC+ +L+ SS   C+ +P        +       N   
Sbjct: 69  LYNMLI---------ERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTT 122

Query: 153 YSLNPLNY 160
            ++NPL +
Sbjct: 129 RTINPLGF 122

[Close]

BLAST of Carg09647 vs. Swiss-Prot
Match: sp|Q6NMJ2|OLE96_ARATH (Pollen-specific protein-like At4g18596 OS=Arabidopsis thaliana OX=3702 GN=At4g18596 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 6.5e-05
Identity = 35/137 (25.55%), Postives = 60/137 (43.80%), Query Frame = 0


Query: 32  FSQITVMGLVYCDTCSNNSFSKHSYFLPGAEVRIDCKLKAETPRTAEQIAFSVNRTTNKN 91
           F +  + G VYCDTC     ++ S FL GA+V+++C+      RT   +  +    T+K 
Sbjct: 30  FDRFQIQGSVYCDTCRVQFVTRLSKFLEGAKVKLECR-----SRTNGTVTLTKEAVTDKT 89

Query: 92  GVYKLEIPSMDGIRCAEDSSMASFCQASLMGSSSSAC---NVPGYRTTSGEISIKSRQSN 151
           G Y++E+                 C+  L+ S  S C   +   Y   + +IS+ +    
Sbjct: 90  GSYRMEVTG---------DHEEEVCELVLVESPDSGCSDVSKEAYLRNAAKISLTANDGI 149

Query: 152 VCIYS--LNPLNYRPST 164
           V   +  +NPL +   T
Sbjct: 150 VSHETRIVNPLGFMVQT 152

[Close]

BLAST of Carg09647 vs. Swiss-Prot
Match: sp|P33050|PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 5.5e-04
Identity = 31/124 (25.00%), Postives = 56/124 (45.16%), Query Frame = 0


Query: 37  VMGLVYCDTCSNNSFSKHSYFLPGAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKL 96
           + G VYCDTC     +  + ++ GA+VR++CK          ++  +++  T+  G Y +
Sbjct: 37  IQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFG-----TGKLERAIDGVTDATGTYTI 96

Query: 97  EIPSMDGIRCAEDSSMASFCQASLMGSSSSACN-VPGYRTTSGEISIKSRQSNVCIYSLN 156
           E+         +DS     CQ  L+ S    C+ V   R  +G +  ++   +  +   N
Sbjct: 97  EL---------KDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLRPAN 146

Query: 157 PLNY 160
           PL Y
Sbjct: 157 PLGY 146

[Close]

BLAST of Carg09647 vs. TrEMBL
Match: tr|A0A1S3BPJ6|A0A1S3BPJ6_CUCME (major pollen allergen Ole e 1-like OS=Cucumis melo OX=3656 GN=LOC103491809 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.2e-77
Identity = 151/172 (87.79%), Postives = 160/172 (93.02%), Query Frame = 0


Query: 1   MNLILLLVLASLVSSSLVLGIQAVHSHHSR-IFSQITVMGLVYCDTCSNNSFSKHSYFLP 60
           MNLILL VLASLV SS +  IQA HSH  R I+SQITVMGLVYCDTCSNN+FSKHSYFL 
Sbjct: 1   MNLILLFVLASLVPSSFLFEIQAAHSHPPRTIYSQITVMGLVYCDTCSNNTFSKHSYFLS 60

Query: 61  GAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQAS 120
           GAEVRIDCKLKAETPRTAEQIAFSVNRTTNK GVYKLEIPS+DGIRCAEDS+M SFCQAS
Sbjct: 61  GAEVRIDCKLKAETPRTAEQIAFSVNRTTNKYGVYKLEIPSVDGIRCAEDSAMVSFCQAS 120

Query: 121 LMGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 172
           LMGSSSS+CNVPGYR+TSGEISIKSRQSN+CIYSLNPLNY+PSTRDDILCGN
Sbjct: 121 LMGSSSSSCNVPGYRSTSGEISIKSRQSNICIYSLNPLNYKPSTRDDILCGN 172

[Close]

BLAST of Carg09647 vs. TrEMBL
Match: tr|A0A0A0LDJ0|A0A0A0LDJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G563290 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 9.8e-75
Identity = 148/172 (86.05%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 1   MNLILLLVLASLVSSSLVLGIQAVHSHHSR-IFSQITVMGLVYCDTCSNNSFSKHSYFLP 60
           MN ILL VLASLV S  +  I+A HSH  R  +SQITVMGLVYCDTCSNN+FSKHSYFL 
Sbjct: 1   MNHILLFVLASLVPSFFLFEIKAAHSHPPRTTYSQITVMGLVYCDTCSNNTFSKHSYFLS 60

Query: 61  GAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQAS 120
           GAEVRIDCKLKAETPRTAEQIAFSVNRTTNK GVYKLEIPS+DGIRCAEDS+M SFCQAS
Sbjct: 61  GAEVRIDCKLKAETPRTAEQIAFSVNRTTNKYGVYKLEIPSVDGIRCAEDSAMVSFCQAS 120

Query: 121 LMGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCGN 172
           LMGSSSS+CNVPGYR+TSGEISIKSRQSN+CIYSLNPLNYRPSTRDDILCGN
Sbjct: 121 LMGSSSSSCNVPGYRSTSGEISIKSRQSNICIYSLNPLNYRPSTRDDILCGN 172

[Close]

BLAST of Carg09647 vs. TrEMBL
Match: tr|A0A2I4DY76|A0A2I4DY76_9ROSI (pollen-specific protein-like At4g18596 OS=Juglans regia OX=51240 GN=LOC108984561 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 4.3e-54
Identity = 110/170 (64.71%), Postives = 139/170 (81.76%), Query Frame = 0


Query: 1   MNLILLLVLASLVSSSLVLGIQAVHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLPG 60
           MNL++L V++SL  +SL LG++   ++     SQI VMG VYCD CSNNSFS+HSYFLP 
Sbjct: 1   MNLVILFVISSLFLNSLFLGVEPAIAN-----SQIIVMGFVYCDICSNNSFSRHSYFLPD 60

Query: 61  AEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQASL 120
           AEVRIDCK KA + +T EQI+ SVNRTTNK+GVY+LEIPS+DGI+CAEDS++ S C+ASL
Sbjct: 61  AEVRIDCKFKAISRKTVEQISISVNRTTNKHGVYRLEIPSVDGIKCAEDSAVVSSCKASL 120

Query: 121 MGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCG 171
             +SSS+CN+PGY TTS +I+IKS+Q+N+CIYSLN LN+RPS RD  LCG
Sbjct: 121 TWTSSSSCNIPGYTTTSDQIAIKSKQANLCIYSLNALNFRPSKRDITLCG 165

[Close]

BLAST of Carg09647 vs. TrEMBL
Match: tr|A0A251Q869|A0A251Q869_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G309900 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.6e-53
Identity = 108/172 (62.79%), Postives = 140/172 (81.40%), Query Frame = 0


Query: 1   MNLILLLVLASLVSSSLVLGIQAVHSH--HSRIFSQITVMGLVYCDTCSNNSFSKHSYFL 60
           MN + LLV++SL   S+ LG++A  +        SQI VMGLVYCD CSNN+FS+HSYF+
Sbjct: 1   MNPLFLLVISSLFFQSVYLGVEAAKAKPVKGTTRSQIIVMGLVYCDICSNNTFSRHSYFI 60

Query: 61  PGAEVRIDCKLKAETPRTAEQIAFSVNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQA 120
           PGAEV+IDC  +A +PRT+E I+FSVNRTTNK GVYKLEIP+++GI+CA+DS++ S CQA
Sbjct: 61  PGAEVKIDCIFQAVSPRTSEHISFSVNRTTNKYGVYKLEIPAVEGIKCAQDSAIVSSCQA 120

Query: 121 SLMGSSSSACNVPGYRTTSGEISIKSRQSNVCIYSLNPLNYRPSTRDDILCG 171
           +LM SSSS CNVPGY++TS EI++KS+Q+N+CIYSLN LN+RPS R+  LCG
Sbjct: 121 TLMWSSSSVCNVPGYKSTSDEITVKSKQANLCIYSLNALNFRPSKREITLCG 172

[Close]

BLAST of Carg09647 vs. TrEMBL
Match: tr|A0A2G9HPD0|A0A2G9HPD0_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07930 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.8e-53
Identity = 101/147 (68.71%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 24  VHSHHSRIFSQITVMGLVYCDTCSNNSFSKHSYFLPGAEVRIDCKLKAETPRTAEQIAFS 83
           V +  SR + QITVMG+VYCDTCSNNSFS+HSYFLPGAEVRIDC  KA +PRT EQI+FS
Sbjct: 36  VEAAKSRSYPQITVMGMVYCDTCSNNSFSRHSYFLPGAEVRIDCMFKAISPRTTEQISFS 95

Query: 84  VNRTTNKNGVYKLEIPSMDGIRCAEDSSMASFCQASLMGSSSSACNVPGYRTTSGEISIK 143
           VNRTTNK G+YKLE+PS+DG++CA D +  + C+ASL+ SSSS+C++PG+RTTS EISIK
Sbjct: 96  VNRTTNKFGIYKLEVPSVDGVQCARDKAFGNSCRASLISSSSSSCDMPGFRTTSDEISIK 155

Query: 144 SRQSNVCIYSLNPLNYRPSTRDDILCG 171
           SR++N+CIYSL  L YRPS +D  LCG
Sbjct: 156 SRKANLCIYSLRALTYRPSKKDIALCG 182

The following BLAST results are available for this feature:

BLAST of Carg09647 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934369.1	6.9e-88	98.83	major pollen allergen Ole e 1-like [Cucurbita moschata]	[more]
XP_023527407.1	1.7e-86	97.66	major pollen allergen Ole e 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022983553.1	1.4e-85	96.49	major pollen allergen Ole e 1-like [Cucurbita maxima]	[more]
XP_008450135.1	9.3e-77	87.79	PREDICTED: major pollen allergen Ole e 1-like [Cucumis melo]	[more]
XP_004148007.1	1.5e-74	86.05	PREDICTED: major pollen allergen Ole e 1 [Cucumis sativus] >KGN58156.1 hypotheti...	[more]

BLAST of Carg09647 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41050.1	4.1e-42	57.45	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G13140.1	3.4e-41	52.82	Pollen Ole e 1 allergen and extensin family protein	[more]
AT3G26960.1	1.0e-40	51.76	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G15780.1	1.1e-07	25.90	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G45880.1	7.3e-07	27.01	Pollen Ole e 1 allergen and extensin family protein	[more]

BLAST of Carg09647 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P19963\|ALL1_OLEEU	1.5e-06	27.34	Major pollen allergen Ole e 1 OS=Olea europaea OX=4146 PE=1 SV=2	[more]
sp\|O82015\|LIGV1_LIGVU	3.8e-05	27.34	Major pollen allergen Lig v 1 OS=Ligustrum vulgare OX=13597 PE=1 SV=2	[more]
sp\|Q6NMJ2\|OLE96_ARATH	6.5e-05	25.55	Pollen-specific protein-like At4g18596 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
sp\|P33050\|PSC13_MAIZE	5.5e-04	25.00	Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1	[more]

BLAST of Carg09647 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BPJ6\|A0A1S3BPJ6_CUCME	6.2e-77	87.79	major pollen allergen Ole e 1-like OS=Cucumis melo OX=3656 GN=LOC103491809 PE=4 ...	[more]
tr\|A0A0A0LDJ0\|A0A0A0LDJ0_CUCSA	9.8e-75	86.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G563290 PE=4 SV=1	[more]
tr\|A0A2I4DY76\|A0A2I4DY76_9ROSI	4.3e-54	64.71	pollen-specific protein-like At4g18596 OS=Juglans regia OX=51240 GN=LOC108984561...	[more]
tr\|A0A251Q869\|A0A251Q869_PRUPE	1.6e-53	62.79	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G309900 PE=4 SV=1	[more]
tr\|A0A2G9HPD0\|A0A2G9HPD0_9LAMI	2.8e-53	68.71	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07930 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09647-RA	Carg09647-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_I	coord: 37..135 e-value: 5.0E-23 score: 81.3
None	No IPR available	PANTHER	PTHR31614	FAMILY NOT NAMED	coord: 4..171
None	No IPR available	PANTHER	PTHR31614:SF3	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 4..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09647	Cla002155	Watermelon (97103) v1	carwmB0435
Carg09647	Csa3G563290	Cucumber (Chinese Long) v2	carcuB0466
Carg09647	MELO3C014907	Melon (DHL92) v3.5.1	carmeB0444
Carg09647	ClCG05G013790	Watermelon (Charleston Gray)	carwcgB0428
Carg09647	CSPI03G25330	Wild cucumber (PI 183967)	carcpiB0471
Carg09647	Cucsa.053960	Cucumber (Gy14) v1	carcgyB0500
Carg09647	CmaCh14G007350	Cucurbita maxima (Rimu)	carcmaB0607
Carg09647	CmaCh11G015240	Cucurbita maxima (Rimu)	carcmaB0605
Carg09647	CmoCh14G007500	Cucurbita moschata (Rifu)	carcmoB0592
Carg09647	CmoCh11G015970	Cucurbita moschata (Rifu)	carcmoB0589
Carg09647	Cp4.1LG03g06720	Cucurbita pepo (Zucchini)	carcpeB0613
Carg09647	Cp4.1LG04g06150	Cucurbita pepo (Zucchini)	carcpeB0614
Carg09647	CsGy3G023760	Cucumber (Gy14) v2	carcgybB0443
Carg09647	MELO3C014907.2	Melon (DHL92) v3.6.1	carmedB0446
Carg09647	CsaV3_3G026830	Cucumber (Chinese Long) v3	carcucB0467
Carg09647	Cla97C05G095480	Watermelon (97103) v2	carwmbB0457
Carg09647	Bhi01G001634	Wax gourd	carwgoB0526

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09647	Carg15545	Silver-seed gourd	carcarB397

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09647	Silver-seed gourd	carcarB388
Carg09647	Cucumber (Gy14) v2	carcgybB0442
Carg09647	Cucurbita maxima (Rimu)	carcmaB0604
Carg09647	Cucurbita moschata (Rifu)	carcmoB0588
Carg09647	Cucurbita moschata (Rifu)	carcmoB0590
Carg09647	Cucurbita pepo (Zucchini)	carcpeB0610
Carg09647	Cucumber (Chinese Long) v3	carcucB0466
Carg09647	Bottle gourd (USVL1VR-Ls)	carlsiB397
Carg09647	Bottle gourd (USVL1VR-Ls)	carlsiB399
Carg09647	Melon (DHL92) v3.5.1	carmeB0442
Carg09647	Watermelon (Charleston Gray)	carwcgB0430
Carg09647	Watermelon (97103) v1	carwmB0432
Carg09647	Watermelon (97103) v1	carwmB0437
Carg09647	Watermelon (97103) v2	carwmbB0460