Carg09606 (gene) Silver-seed gourd

Overview
NameCarg09606
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionpentatricopeptide repeat-containing protein At1g80550, mitochondrial
LocationCucurbita_argyrosperma_scaffold_029 : 1035614 .. 1036999 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTCTTCCTTCGCTTCCCGCCGTTTCCCTCCGTCTATTTTCTCCTTCTCCGACGTGTTTCTTCCGGCGGCGGCCATATTATTTTCCACCAAAACAACCAATCCCATTTCGGAGTTCGGTTTCAATTTCAACAGCCGGGACGATCGTCCGACACAGACTAATTTCGACCCTCCTACAGTTCGCGAGGCACTCGATTCTTATTGCAACGATTGGAGGCGCTCGTACGAGTTTTTCAACTGGGTTGAATCAGAATGTAAGTTCGATCACACCACCGAGACCTACAATCGCATGCTGGACATTCTCGGTAAGTTCTTCGAATTCGACCTTTCTTGGGAATTGATTCAACGTATGCTACAATCCCCGTTTGCTTCACCGGATCATGCGACATTTCGAATTATGTTTAAGCGCTATGCATCGGCGCATTTAGTTAGTGAAGCGATTGCTGCTTATGAGAGATTGCGGGAGTTTAAATTGAGAGACGAAACTTCGTTTTGTAATCTTATTGATGCACTTTGTGAGTATAGACATGTTGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAACAGGATGTTGAATTGTGGTGCGAGTACGAAGATTCATAACTTAATTCTTCGTGGTTGGCTTAAAATGGGGTGGTGGAGCAAATGTAGAGAGTTTTGGGAAGAGATGGATAAGAAGGGTGTTCGTAAGGATTTGCATTCGTATTCCATTTACATGGACATACAGTGCAAGAGTGGGAAGCCATGGAAGGCTGTTAAATTGTACAAGGAGATGAAAAAGAAGGGGATGAAACTAGATGTAGTGGCGTATAATACAGTAATTCATGCCATTGGGATATCAGAAGGTGTTGATTTTGCCAGCCGGGTGTTTCACGAGATGAAGGAAATGGGATGTAAGCCTAACGTTGTAACTTGCAATACTATTATTAAGCTATTTTGTGAGAATGGTAGATTCAAGGATGCCCATATGATGCTCGATCAAATGCTTAAGAAGGATTGTCCGCCTAATGTCATCACGTATCATTGTTTTTTTCGGTCTCTCGAAAAGCCGAAGGAGATTCTTATGTTATTTGATAGGATGATTAAATATGGGGTTCAACCAAAGATGGATACTTATGTGATGCTCATGAGGAAGTTTGGAAGATGGGGGTTTCTAAGACCAGTGTTTGTAGTGTGGAATAAGATGGAGGAACTTGGGTGTAGCCCAGATGAGTCTGCTTACAATTCTTTGATTGATGCTCTTGTGGAGAAGGGCATGATAGATATGGCTAGGAAGTACGACGAAGAGATGGTAGCGAAAGGTCTTTCGCCTAAGCTGAGAGAGGAATTGGGGACGAAGATGGTGAATGGTGGCTATCATGCCAATGTGAACTGCAACAAGTAG

mRNA sequence

ATGCTTTCTTCCTTCGCTTCCCGCCGTTTCCCTCCGTCTATTTTCTCCTTCTCCGACGTGTTTCTTCCGGCGGCGGCCATATTATTTTCCACCAAAACAACCAATCCCATTTCGGAGTTCGGTTTCAATTTCAACAGCCGGGACGATCGTCCGACACAGACTAATTTCGACCCTCCTACAGTTCGCGAGGCACTCGATTCTTATTGCAACGATTGGAGGCGCTCGTACGAGTTTTTCAACTGGGTTGAATCAGAATGTAAGTTCGATCACACCACCGAGACCTACAATCGCATGCTGGACATTCTCGGTAAGTTCTTCGAATTCGACCTTTCTTGGGAATTGATTCAACGTATGCTACAATCCCCGTTTGCTTCACCGGATCATGCGACATTTCGAATTATGTTTAAGCGCTATGCATCGGCGCATTTAGTTAGTGAAGCGATTGCTGCTTATGAGAGATTGCGGGAGTTTAAATTGAGAGACGAAACTTCGTTTTGTAATCTTATTGATGCACTTTGTGAGTATAGACATGTTGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAACAGGATGTTGAATTGTGGTGCGAGTACGAAGATTCATAACTTAATTCTTCGTGGTTGGCTTAAAATGGGGTGGTGGAGCAAATGTAGAGAGTTTTGGGAAGAGATGGATAAGAAGGGTGTTCGTAAGGATTTGCATTCGTATTCCATTTACATGGACATACAGTGCAAGAGTGGGAAGCCATGGAAGGCTGTTAAATTGTACAAGGAGATGAAAAAGAAGGGGATGAAACTAGATGTAGTGGCGTATAATACAGTAATTCATGCCATTGGGATATCAGAAGGTGTTGATTTTGCCAGCCGGGTGTTTCACGAGATGAAGGAAATGGGATGTAAGCCTAACGTTGTAACTTGCAATACTATTATTAAGCTATTTTGTGAGAATGGTAGATTCAAGGATGCCCATATGATGCTCGATCAAATGCTTAAGAAGGATTGTCCGCCTAATGTCATCACGTATCATTGTTTTTTTCGGTCTCTCGAAAAGCCGAAGGAGATTCTTATGTTATTTGATAGGATGATTAAATATGGGGTTCAACCAAAGATGGATACTTATGTGATGCTCATGAGGAAGTTTGGAAGATGGGGGTTTCTAAGACCAGTGTTTGTAGTGTGGAATAAGATGGAGGAACTTGGGTGTAGCCCAGATGAGTCTGCTTACAATTCTTTGATTGATGCTCTTGTGGAGAAGGGCATGATAGATATGGCTAGGAAGTACGACGAAGAGATGGTAGCGAAAGGTCTTTCGCCTAAGCTGAGAGAGGAATTGGGGACGAAGATGGTGAATGGTGGCTATCATGCCAATGTGAACTGCAACAAGTAG

Coding sequence (CDS)

ATGCTTTCTTCCTTCGCTTCCCGCCGTTTCCCTCCGTCTATTTTCTCCTTCTCCGACGTGTTTCTTCCGGCGGCGGCCATATTATTTTCCACCAAAACAACCAATCCCATTTCGGAGTTCGGTTTCAATTTCAACAGCCGGGACGATCGTCCGACACAGACTAATTTCGACCCTCCTACAGTTCGCGAGGCACTCGATTCTTATTGCAACGATTGGAGGCGCTCGTACGAGTTTTTCAACTGGGTTGAATCAGAATGTAAGTTCGATCACACCACCGAGACCTACAATCGCATGCTGGACATTCTCGGTAAGTTCTTCGAATTCGACCTTTCTTGGGAATTGATTCAACGTATGCTACAATCCCCGTTTGCTTCACCGGATCATGCGACATTTCGAATTATGTTTAAGCGCTATGCATCGGCGCATTTAGTTAGTGAAGCGATTGCTGCTTATGAGAGATTGCGGGAGTTTAAATTGAGAGACGAAACTTCGTTTTGTAATCTTATTGATGCACTTTGTGAGTATAGACATGTTGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAACAGGATGTTGAATTGTGGTGCGAGTACGAAGATTCATAACTTAATTCTTCGTGGTTGGCTTAAAATGGGGTGGTGGAGCAAATGTAGAGAGTTTTGGGAAGAGATGGATAAGAAGGGTGTTCGTAAGGATTTGCATTCGTATTCCATTTACATGGACATACAGTGCAAGAGTGGGAAGCCATGGAAGGCTGTTAAATTGTACAAGGAGATGAAAAAGAAGGGGATGAAACTAGATGTAGTGGCGTATAATACAGTAATTCATGCCATTGGGATATCAGAAGGTGTTGATTTTGCCAGCCGGGTGTTTCACGAGATGAAGGAAATGGGATGTAAGCCTAACGTTGTAACTTGCAATACTATTATTAAGCTATTTTGTGAGAATGGTAGATTCAAGGATGCCCATATGATGCTCGATCAAATGCTTAAGAAGGATTGTCCGCCTAATGTCATCACGTATCATTGTTTTTTTCGGTCTCTCGAAAAGCCGAAGGAGATTCTTATGTTATTTGATAGGATGATTAAATATGGGGTTCAACCAAAGATGGATACTTATGTGATGCTCATGAGGAAGTTTGGAAGATGGGGGTTTCTAAGACCAGTGTTTGTAGTGTGGAATAAGATGGAGGAACTTGGGTGTAGCCCAGATGAGTCTGCTTACAATTCTTTGATTGATGCTCTTGTGGAGAAGGGCATGATAGATATGGCTAGGAAGTACGACGAAGAGATGGTAGCGAAAGGTCTTTCGCCTAAGCTGAGAGAGGAATTGGGGACGAAGATGGTGAATGGTGGCTATCATGCCAATGTGAACTGCAACAAGTAG

Protein sequence

MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPTVREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQSPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCKPNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDRMIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGMIDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK
Homology
[Close]
BLAST of Carg09606 vs. NCBI nr
Match: XP_022953157.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953158.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953159.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata])

HSP 1 Score: 720.7 bits (1859), Expect = 3.2e-204
Identity = 454/461 (98.48%), Postives = 457/461 (99.13%), Query Frame = 0 

Query: 1   MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60
           MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFN+ +DRPTQTNFDPPT
Sbjct: 18  MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNTPEDRPTQTNFDPPT 77

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ
Sbjct: 78  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLID+LCEYRHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDSLCEYRHVVE 197

Query: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
           AQDLCFGKNR LNC ASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257

Query: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 258 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 317

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR
Sbjct: 318 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR 377

Query: 361 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 420
           MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM
Sbjct: 378 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 437

Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 462
           IDMARKYDEEMVAKGLSPKLR ELGTKMVNGGYHANVNCNK
Sbjct: 438 IDMARKYDEEMVAKGLSPKLRAELGTKMVNGGYHANVNCNK 478

[Close]
BLAST of Carg09606 vs. NCBI nr
Match: XP_023547614.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023547616.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 720.3 bits (1858), Expect = 4.1e-204
Identity = 454/461 (98.48%), Postives = 456/461 (98.92%), Query Frame = 0 

Query: 1   MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60
           MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFN+ +DRPTQTNFDPPT
Sbjct: 18  MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNTPEDRPTQTNFDPPT 77

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           VREALDSYCNDWR SYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ
Sbjct: 78  VREALDSYCNDWRCSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 197

Query: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
           AQDLCFGKNR LNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257

Query: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 258 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 317

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKP EILMLFDR
Sbjct: 318 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPNEILMLFDR 377

Query: 361 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 420
           MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM
Sbjct: 378 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 437

Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 462
           IDMARKYDEEMV KGLSPKLREELGTKMVNGGYHANVNCNK
Sbjct: 438 IDMARKYDEEMVVKGLSPKLREELGTKMVNGGYHANVNCNK 478

[Close]
BLAST of Carg09606 vs. NCBI nr
Match: XP_022991827.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima] >XP_022991828.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima] >XP_022991829.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima])

HSP 1 Score: 712.2 bits (1837), Expect = 1.1e-201
Identity = 451/461 (97.83%), Postives = 454/461 (98.48%), Query Frame = 0 

Query: 1   MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60
           MLSSFASRRF PSIFSFSDVFLPAAAILFSTKTTNPIS FGFNFN+ +DRPTQTNFDPPT
Sbjct: 18  MLSSFASRRFSPSIFSFSDVFLPAAAILFSTKTTNPISVFGFNFNTPEDRPTQTNFDPPT 77

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ
Sbjct: 78  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 197

Query: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
           AQDLCFGKNR LNC ASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257

Query: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 258 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 317

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR
Sbjct: 318 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR 377

Query: 361 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 420
           MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM
Sbjct: 378 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 437

Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 462
           ID ARKYDEEMVAKGLSPKLR ELGT+MVNGGYHANVNCNK
Sbjct: 438 IDRARKYDEEMVAKGLSPKLRAELGTEMVNGGYHANVNCNK 478

[Close]
BLAST of Carg09606 vs. NCBI nr
Match: XP_022148858.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Momordica charantia])

HSP 1 Score: 637.1 bits (1642), Expect = 4.6e-179
Identity = 413/461 (89.59%), Postives = 429/461 (93.06%), Query Frame = 0 

Query: 1   MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60
           MLSS ASRRFPP I SFS+V LP   +LFSTKT  PISE    FNS + RP QTNFDP T
Sbjct: 1   MLSSLASRRFPPFILSFSEVLLPPGNLLFSTKTAAPISELDCKFNSPERRPVQTNFDPST 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           VREALDSYCNDWRRS+EFFNWVESECKFDHTTETYNRMLDILGKFFEFD+SW L+QRM Q
Sbjct: 61  VREALDSYCNDWRRSFEFFNWVESECKFDHTTETYNRMLDILGKFFEFDISWVLVQRMQQ 120

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FASPDHATFRI+FKRYASAHLV+EAIAAYER REFKLRDETSFCNLIDALCEYRHVVE
Sbjct: 121 SAFASPDHATFRILFKRYASAHLVTEAIAAYERSREFKLRDETSFCNLIDALCEYRHVVE 180

Query: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
           AQDLCFGKN+ ++C ASTKIHNLILRGWLKMGWWSKCREFWEEMD KGVRKDLHSYSIYM
Sbjct: 181 AQDLCFGKNKKVDCNASTKIHNLILRGWLKMGWWSKCREFWEEMDNKGVRKDLHSYSIYM 240

Query: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     EKP EILMLFDR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKPNEILMLFDR 360

Query: 361 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 420
           MIK+GV PKMDTYVMLMRKFGRWGFLRPVF+VWNKMEELGCSP+ESAYN+LIDALVEKGM
Sbjct: 361 MIKFGVHPKMDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420

Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 462
           IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANV CN+
Sbjct: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVICNE 461

[Close]
BLAST of Carg09606 vs. NCBI nr
Match: XP_008461152.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucumis melo])

HSP 1 Score: 627.9 bits (1618), Expect = 2.8e-176
Identity = 410/461 (88.94%), Postives = 425/461 (92.19%), Query Frame = 0 

Query: 1   MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60
           ML SFASRR           FLP A I FSTKT NPI EF F FN+ + RPT  NFDP T
Sbjct: 1   MLFSFASRR-----------FLPPATIFFSTKTINPIPEFDFKFNTSERRPTHANFDPST 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           VREALDSYCNDW+RSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSW LI RM Q
Sbjct: 61  VREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQ 120

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           SPFA PDH TFRI+FKRYA+AHLV+EAIAAYERLREFKLRDETSFCNLIDALCE RHV E
Sbjct: 121 SPFAPPDHTTFRILFKRYAAAHLVTEAIAAYERLREFKLRDETSFCNLIDALCESRHVDE 180

Query: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
           AQ+LCFGKNR L+C +STKIHNLILRGWLKMGWWSKCR+FWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQELCFGKNRRLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYM 240

Query: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEIL+LFDR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILILFDR 360

Query: 361 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 420
           MIKYGV PKMDTYVML+RKFGRWGFLRPVF+VWNKMEELGCSP+E AYN+LIDALVEKGM
Sbjct: 361 MIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGM 420

Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 462
           IDMARKYDEEMVAKGLSPKLR ELGTKMVNGGYHANVNCNK
Sbjct: 421 IDMARKYDEEMVAKGLSPKLRVELGTKMVNGGYHANVNCNK 450

[Close]
BLAST of Carg09606 vs. TAIR10
Match: AT1G80550.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 390.2 bits (1001), Expect = 1.8e-108
Identity = 293/430 (68.14%), Postives = 351/430 (81.63%), Query Frame = 0 

Query: 23  PAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPTVREALDSYCNDWRRSYEFFNWV 82
           P +  L S K  + + +  F     +D   Q+++D  TV EAL  Y NDW+++ EFFNWV
Sbjct: 15  PYSVRLLSVKPISNVDDAKFRSQEEED---QSSYDQKTVCEALTCYSNDWQKALEFFNWV 74

Query: 83  ESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQSPFASPDHATFRIMFKRYASAH 142
           E E  F HTTET+NR++DILGK+FEF++SW LI RM+ +  + P+H TFRI+FKRY +AH
Sbjct: 75  ERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAH 134

Query: 143 LVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKNRMLN--CGASTKI 202
           LV EAI AY++L +F LRDETSF NL+DALCE++HVVEA++LCFGKN + N    ++TKI
Sbjct: 135 LVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKI 194

Query: 203 HNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWXXXXXXXXXX 262
           HNLILRGW K+GWW KC+E+W++MD +GV KDL SYSIYMDI CKSGKPWXXXXXXXXXX
Sbjct: 195 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWXXXXXXXXXX 254

Query: 263 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 322
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 255 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 314

Query: 323 XXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDRMIKYGVQPKMDTYVMLMRKF 382
           XXXXXXXXXXXXXXXXXXXXXXX      KP EIL LF RMI+ GV+PKMDTYVMLMRKF
Sbjct: 315 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSEILSLFGRMIRSGVRPKMDTYVMLMRKF 374

Query: 383 GRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGMIDMARKYDEEMVAKGLSPKL 442
            RWGFL+PV  VW  M+E G +PD +AYN++IDAL++KGM+DMAR+Y+EEM+ +GLSP+ 
Sbjct: 375 ERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 434

Query: 443 REELGTKMVN 451
           R EL  K ++
Sbjct: 435 RPELVEKSLD 441

[Close]
BLAST of Carg09606 vs. TAIR10
Match: AT3G15200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-20
Identity = 162/387 (41.86%), Postives = 222/387 (57.36%), Query Frame = 0 

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           V E ++   +DW+ +Y     V  +     ++  YN +LD+LGK   F+   ++   M +
Sbjct: 112 VLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSK 171

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDE-TSFCNLIDALCEYRHVV 180
                 +  T+ ++  RYA+AH V EA+  +ER +EF + D+  +F  L+  LC Y+HV 
Sbjct: 172 RD-GFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVE 231

Query: 181 EAQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDL--HSYS 240
            A+ L   + R   C    K  N+IL GW  +G   + + FW+++     R D+      
Sbjct: 232 FAETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVXXXXX 291

Query: 241 IYMDIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 292 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILML 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              +  ++ K++ ++
Sbjct: 352 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSCSPNDVTFSYLLKYSQRSKDVDIV 411

Query: 361 FDRMIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVE 420
            +RM K   +   D Y ++ R + +W     V  +W++ME  G  PD+  Y   I  L  
Sbjct: 412 LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHT 471

Query: 421 KGMIDMARKYDEEMVAKGLSPKLREEL 445
           KG I  A  Y +EM++KG+ P+ R E+
Sbjct: 472 KGKIGEALSYFQEMMSKGMVPEPRTEM 495

[Close]
BLAST of Carg09606 vs. TAIR10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-20
Identity = 60/189 (31.75%), Postives = 90/189 (47.62%), Query Frame = 0 

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           V E L    NDW  ++ FF W   +  +  +   Y+ M+ ILGK  +FD +W LI  M +
Sbjct: 130 VVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK 189

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCEYRHVV 180
              +  +  T  IM ++Y + H V +AI  +   + FKL      F +L+ ALC Y++V 
Sbjct: 190 FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVS 249

Query: 181 EAQDLCFGKNRMLNCGASTKIHNLILRGWLK-MGWWSKCREFWEEMDKKGVRKDLHSYSI 240
           +A  L F         A  K  N++L GW   +G   +    W EM   GV+ D+ SYS 
Sbjct: 250 DAGHLIFCNKDKYPFDA--KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSS 309

Query: 241 YMDIQCKSG 248
            +    K G
Sbjct: 310 MISCYSKGG 316

[Close]
BLAST of Carg09606 vs. TAIR10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-12
Identity = 38/110 (34.55%), Postives = 56/110 (50.91%), Query Frame = 0 

Query: 58  PPTVREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQR 117
           P  + E L    N    +   F W E++  F HTT  YN +++ LGK  +F L W L+  
Sbjct: 94  PALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDD 153

Query: 118 MLQSPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCN 168
           M      S +  TF ++ +RYA A  V EAI A+ ++ EF  + E+S  N
Sbjct: 154 MKAKKLLSKE--TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFN 201

[Close]
BLAST of Carg09606 vs. TAIR10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.8e-12
Identity = 46/172 (26.74%), Postives = 84/172 (48.84%), Query Frame = 0 

Query: 59  PTVREALDSYCND-WRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQR 118
           P + E + + C D     Y FF W   + ++ H+ E Y  M+ IL K  +F   W LI+ 
Sbjct: 113 PGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEE 172

Query: 119 MLQSPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCEYR 178
           M +      +   F ++ +R+ASA +V +AI   + + +F    DE  F  L+DALC++ 
Sbjct: 173 MRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHG 232

Query: 179 HVVEAQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKG 229
            V +A  L   ++  +    + +    +L GW ++G   + +    +M++ G
Sbjct: 233 SVKDAAKLF--EDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282

[Close]
BLAST of Carg09606 vs. Swiss-Prot
Match: sp|Q9M8M3|PP136_ARATH (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80550 PE=1 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 3.2e-107
Identity = 293/430 (68.14%), Postives = 351/430 (81.63%), Query Frame = 0 

Query: 23  PAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPTVREALDSYCNDWRRSYEFFNWV 82
           P +  L S K  + + +  F     +D   Q+++D  TV EAL  Y NDW+++ EFFNWV
Sbjct: 15  PYSVRLLSVKPISNVDDAKFRSQEEED---QSSYDQKTVCEALTCYSNDWQKALEFFNWV 74

Query: 83  ESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQSPFASPDHATFRIMFKRYASAH 142
           E E  F HTTET+NR++DILGK+FEF++SW LI RM+ +  + P+H TFRI+FKRY +AH
Sbjct: 75  ERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAH 134

Query: 143 LVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKNRMLN--CGASTKI 202
           LV EAI AY++L +F LRDETSF NL+DALCE++HVVEA++LCFGKN + N    ++TKI
Sbjct: 135 LVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKI 194

Query: 203 HNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWXXXXXXXXXX 262
           HNLILRGW K+GWW KC+E+W++MD +GV KDL SYSIYMDI CKSGKPWXXXXXXXXXX
Sbjct: 195 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWXXXXXXXXXX 254

Query: 263 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 322
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 255 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 314

Query: 323 XXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDRMIKYGVQPKMDTYVMLMRKF 382
           XXXXXXXXXXXXXXXXXXXXXXX      KP EIL LF RMI+ GV+PKMDTYVMLMRKF
Sbjct: 315 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSEILSLFGRMIRSGVRPKMDTYVMLMRKF 374

Query: 383 GRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGMIDMARKYDEEMVAKGLSPKL 442
            RWGFL+PV  VW  M+E G +PD +AYN++IDAL++KGM+DMAR+Y+EEM+ +GLSP+ 
Sbjct: 375 ERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 434

Query: 443 REELGTKMVN 451
           R EL  K ++
Sbjct: 435 RPELVEKSLD 441

[Close]
BLAST of Carg09606 vs. Swiss-Prot
Match: sp|Q9LIL5|PP233_ARATH (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana OX=3702 GN=At3g15200 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.5e-19
Identity = 162/387 (41.86%), Postives = 222/387 (57.36%), Query Frame = 0 

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           V E ++   +DW+ +Y     V  +     ++  YN +LD+LGK   F+   ++   M +
Sbjct: 112 VLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSK 171

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDE-TSFCNLIDALCEYRHVV 180
                 +  T+ ++  RYA+AH V EA+  +ER +EF + D+  +F  L+  LC Y+HV 
Sbjct: 172 RD-GFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVE 231

Query: 181 EAQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDL--HSYS 240
            A+ L   + R   C    K  N+IL GW  +G   + + FW+++     R D+      
Sbjct: 232 FAETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVXXXXX 291

Query: 241 IYMDIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 292 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILML 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              +  ++ K++ ++
Sbjct: 352 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSCSPNDVTFSYLLKYSQRSKDVDIV 411

Query: 361 FDRMIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVE 420
            +RM K   +   D Y ++ R + +W     V  +W++ME  G  PD+  Y   I  L  
Sbjct: 412 LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHT 471

Query: 421 KGMIDMARKYDEEMVAKGLSPKLREEL 445
           KG I  A  Y +EM++KG+ P+ R E+
Sbjct: 472 KGKIGEALSYFQEMMSKGMVPEPRTEM 495

[Close]
BLAST of Carg09606 vs. Swiss-Prot
Match: sp|Q9LFQ4|PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 2.5e-19
Identity = 60/189 (31.75%), Postives = 90/189 (47.62%), Query Frame = 0 

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           V E L    NDW  ++ FF W   +  +  +   Y+ M+ ILGK  +FD +W LI  M +
Sbjct: 130 VVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK 189

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCEYRHVV 180
              +  +  T  IM ++Y + H V +AI  +   + FKL      F +L+ ALC Y++V 
Sbjct: 190 FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVS 249

Query: 181 EAQDLCFGKNRMLNCGASTKIHNLILRGWLK-MGWWSKCREFWEEMDKKGVRKDLHSYSI 240
           +A  L F         A  K  N++L GW   +G   +    W EM   GV+ D+ SYS 
Sbjct: 250 DAGHLIFCNKDKYPFDA--KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSS 309

Query: 241 YMDIQCKSG 248
            +    K G
Sbjct: 310 MISCYSKGG 316

[Close]
BLAST of Carg09606 vs. Swiss-Prot
Match: sp|Q9C9A2|PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.9e-11
Identity = 38/110 (34.55%), Postives = 56/110 (50.91%), Query Frame = 0 

Query: 58  PPTVREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQR 117
           P  + E L    N    +   F W E++  F HTT  YN +++ LGK  +F L W L+  
Sbjct: 94  PALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDD 153

Query: 118 MLQSPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCN 168
           M      S +  TF ++ +RYA A  V EAI A+ ++ EF  + E+S  N
Sbjct: 154 MKAKKLLSKE--TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFN 201

[Close]
BLAST of Carg09606 vs. Swiss-Prot
Match: sp|Q9FH87|PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.3e-11
Identity = 46/172 (26.74%), Postives = 84/172 (48.84%), Query Frame = 0 

Query: 59  PTVREALDSYCND-WRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQR 118
           P + E + + C D     Y FF W   + ++ H+ E Y  M+ IL K  +F   W LI+ 
Sbjct: 113 PGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEE 172

Query: 119 MLQSPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCEYR 178
           M +      +   F ++ +R+ASA +V +AI   + + +F    DE  F  L+DALC++ 
Sbjct: 173 MRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHG 232

Query: 179 HVVEAQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKG 229
            V +A  L   ++  +    + +    +L GW ++G   + +    +M++ G
Sbjct: 233 SVKDAAKLF--EDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282

[Close]
BLAST of Carg09606 vs. TrEMBL
Match: tr|A0A1S3CFA1|A0A1S3CFA1_CUCME (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499823 PE=4 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 1.8e-176
Identity = 410/461 (88.94%), Postives = 425/461 (92.19%), Query Frame = 0 

Query: 1   MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60
           ML SFASRR           FLP A I FSTKT NPI EF F FN+ + RPT  NFDP T
Sbjct: 1   MLFSFASRR-----------FLPPATIFFSTKTINPIPEFDFKFNTSERRPTHANFDPST 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           VREALDSYCNDW+RSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSW LI RM Q
Sbjct: 61  VREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQ 120

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           SPFA PDH TFRI+FKRYA+AHLV+EAIAAYERLREFKLRDETSFCNLIDALCE RHV E
Sbjct: 121 SPFAPPDHTTFRILFKRYAAAHLVTEAIAAYERLREFKLRDETSFCNLIDALCESRHVDE 180

Query: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
           AQ+LCFGKNR L+C +STKIHNLILRGWLKMGWWSKCR+FWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQELCFGKNRRLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYM 240

Query: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEIL+LFDR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILILFDR 360

Query: 361 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 420
           MIKYGV PKMDTYVML+RKFGRWGFLRPVF+VWNKMEELGCSP+E AYN+LIDALVEKGM
Sbjct: 361 MIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGM 420

Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 462
           IDMARKYDEEMVAKGLSPKLR ELGTKMVNGGYHANVNCNK
Sbjct: 421 IDMARKYDEEMVAKGLSPKLRVELGTKMVNGGYHANVNCNK 450

[Close]
BLAST of Carg09606 vs. TrEMBL
Match: tr|A0A0A0KBR1|A0A0A0KBR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432170 PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 5.0e-174
Identity = 408/461 (88.50%), Postives = 424/461 (91.97%), Query Frame = 0 

Query: 1   MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60
           ML S ASRR           FLP A I FSTK  +PI EF F FN+ + RPT TNFDP T
Sbjct: 1   MLFSVASRR-----------FLPPATIFFSTKAISPIPEFDFKFNTSERRPTHTNFDPFT 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
           VREALDSYCNDW+RSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSW LI RM Q
Sbjct: 61  VREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQ 120

Query: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           SP ASPDHATFRI+FKRYA AHLVSEAIAAYERLREFKLRDETSFCNLIDALCE RHV E
Sbjct: 121 SPSASPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDE 180

Query: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
           AQ+LCFGKNR L+C +STKIHNLILRGWLKMGWWSKCR+FWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQELCFGKNRKLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYM 240

Query: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 DIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILMLFDR 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEIL+LFDR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPKEILVLFDR 360

Query: 361 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 420
           MIKYGV PKMDTYVML+RKFGRWGFLRPVF+VWNKMEELGCSP+E AYN+LIDALVEKGM
Sbjct: 361 MIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGM 420

Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 462
           IDMARKYDEEMVAKGLSPKLR ELGT+M+NGGYHANVNCNK
Sbjct: 421 IDMARKYDEEMVAKGLSPKLRVELGTQMMNGGYHANVNCNK 450

[Close]
BLAST of Carg09606 vs. TrEMBL
Match: tr|A0A2P5AEN8|A0A2P5AEN8_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_352370 PE=4 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.4e-128
Identity = 339/459 (73.86%), Postives = 382/459 (83.22%), Query Frame = 0 

Query: 1   MLSSFASRRFPPSIF-----SFSDVFLPAAAILFSTK-TTNPISEFGFNFNSRDDRPTQT 60
           M SS  SR    S+      + S + L  A   FSTK T+N   +      S+ D     
Sbjct: 1   MASSLNSRCLRNSLLLSRTQTLSLLLLRPATQSFSTKPTSNHTIQVRLRPQSQSD---SV 60

Query: 61  NFDPPTVREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWEL 120
           +FDP TVRE L SYCNDWRR+ EFFNWVE+   F HTTETYNR+LDILGKFFEF+LSWEL
Sbjct: 61  SFDPNTVRETLSSYCNDWRRALEFFNWVETHHHFQHTTETYNRVLDILGKFFEFELSWEL 120

Query: 121 IQRMLQSPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCE 180
           IQRM Q+P ++PDH TFR+MFKRY SAHLV+EA+  Y RL EF L+DETS+CNLID LCE
Sbjct: 121 IQRMRQNPVSNPDHTTFRVMFKRYVSAHLVNEAVETYNRLGEFGLKDETSYCNLIDTLCE 180

Query: 181 YRHVVEAQDLCFGKNRML--NCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKD 240
           Y+HV+EAQDLCF KN  L  +   +TK++N+ILRGW K+GWWSKCR+FWEEMD++GV K+
Sbjct: 181 YKHVIEAQDLCFWKNNELGFDKNNNTKVYNMILRGWFKLGWWSKCRDFWEEMDRRGVEKN 240

Query: 241 LHSYSIYMDIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           LHSYSIYMDI CKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LHSYSIYMDILCKSGKPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFRSLEKPK 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F SL+KPK
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFASLQKPK 360

Query: 361 EILMLFDRMIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLI 420
           EIL LFDRMI  GV+P MDT+VMLMRKFGRWGFLRPVF+VW KMEELGCSP+ESAYN++I
Sbjct: 361 EILGLFDRMIASGVRPSMDTFVMLMRKFGRWGFLRPVFIVWKKMEELGCSPNESAYNAMI 420

Query: 421 DALVEKGMIDMARKYDEEMVAKGLSPKLREELGTKMVNG 452
           DALV+KGM+DMA+KYDEEM+AKGLSPK R ELGTK+  G
Sbjct: 421 DALVDKGMLDMAKKYDEEMLAKGLSPKPRAELGTKLATG 456

[Close]
BLAST of Carg09606 vs. TrEMBL
Match: tr|A0A2P5BS69|A0A2P5BS69_PARAD (Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_214690 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 5.4e-128
Identity = 327/421 (77.67%), Postives = 368/421 (87.41%), Query Frame = 0 

Query: 33  TTNPISEFGFNFNSR-DDRPTQTNFDPPTVREALDSYCNDWRRSYEFFNWVESECKFDHT 92
           +T PIS        R   +    +FDP TVRE L SYCNDWRR+ EFFNWVE+   F HT
Sbjct: 38  STKPISNHTIQVRLRPQSQSDSVSFDPNTVRETLSSYCNDWRRALEFFNWVETHHHFQHT 97

Query: 93  TETYNRMLDILGKFFEFDLSWELIQRMLQSPFASPDHATFRIMFKRYASAHLVSEAIAAY 152
           TETYNRMLDILGKFFEF+LSWELIQRM Q+P ++PDH TFR++FKRY SAHLV+EA+  Y
Sbjct: 98  TETYNRMLDILGKFFEFELSWELIQRMRQNPVSNPDHTTFRVIFKRYVSAHLVNEAVETY 157

Query: 153 ERLREFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKNRML--NCGASTKIHNLILRGWL 212
            RL EF L+DETS+CNLID LCEY+HV+EAQDLCF KN  L  +   +TK++N+ILRGWL
Sbjct: 158 NRLGEFGLKDETSYCNLIDTLCEYKHVIEAQDLCFWKNNELGFDKNNNTKVYNMILRGWL 217

Query: 213 KMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWXXXXXXXXXXXXXXXXXXX 272
           K+GWWSKCR+FWEEMD++GV K+LHSYSIYMDI CKSGKP XXXXXXXXXXXXXXXXXXX
Sbjct: 218 KLGWWSKCRDFWEEMDRRGVEKNLHSYSIYMDILCKSGKPXXXXXXXXXXXXXXXXXXXX 277

Query: 273 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 332
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 278 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 337

Query: 333 XXXXXXXXXXXXXXFFRSLEKPKEILMLFDRMIKYGVQPKMDTYVMLMRKFGRWGFLRPV 392
           XXXXXXXXXXXXXXFF SL+KPKEI+ LFDRMI  GV+P MDT+VMLMRKFGRWGFLRPV
Sbjct: 338 XXXXXXXXXXXXXXFFASLQKPKEIIGLFDRMIASGVRPSMDTFVMLMRKFGRWGFLRPV 397

Query: 393 FVVWNKMEELGCSPDESAYNSLIDALVEKGMIDMARKYDEEMVAKGLSPKLREELGTKMV 451
           F+VW KMEELGCSP+ESAYN++IDALV+KGM+DMARKYD+EM+AKGLSPK R ELGTK+V
Sbjct: 398 FIVWKKMEELGCSPNESAYNAMIDALVDKGMLDMARKYDQEMLAKGLSPKPRAELGTKLV 457

[Close]
BLAST of Carg09606 vs. TrEMBL
Match: tr|A0A2H5NQ53|A0A2H5NQ53_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_065730 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.8e-124
Identity = 319/419 (76.13%), Postives = 361/419 (86.16%), Query Frame = 0 

Query: 43  NFNSRDDRPTQT--NFDPPTVREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLD 102
           +F+S++ +P     NFD  TVRE L  Y NDW+R+ EFFNWVE++C F HTT+TYN ++D
Sbjct: 26  HFHSQNPKPQSNPHNFDQSTVRETLSCYANDWKRALEFFNWVETDCHFTHTTDTYNSVID 85

Query: 103 ILGKFFEFDLSWELIQRMLQSPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLR 162
           ILGKFFEFDLSW LI RM  +P + P+HATFRIMFKRY +AHLV+EA+  + +L EF L+
Sbjct: 86  ILGKFFEFDLSWNLIHRMKDNPSSIPNHATFRIMFKRYVTAHLVNEAMGTFNKLDEFGLK 145

Query: 163 DETSFCNLIDALCEYRHVVEAQDLCFGKNRMLNCGAS-------TKIHNLILRGWLKMGW 222
           DE S+CNL+DALCEY+HV+EAQ+LCFG+N+  N G S       TKI+N+ILRGW KM W
Sbjct: 146 DEVSYCNLVDALCEYKHVIEAQELCFGENK--NVGFSGLVEMNKTKIYNMILRGWFKMSW 205

Query: 223 WSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWXXXXXXXXXXXXXXXXXXXXXXX 282
           W KCREFWEEMDK+GV KDLHSYSIYMDI CKSGKPW XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 206 WGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWKXXXXXXXXXXXXXXXXXXXXXX 265

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 342
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 266 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 325

Query: 343 XXXXXXXXXXFFRSLEKPKEILMLFDRMIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVW 402
           XXXXXXXXXX    LEKP+EIL LFDRMI+ G++PKMDTYVML+RKFGRWGFLRPVFVVW
Sbjct: 326 XXXXXXXXXXXXXCLEKPREILGLFDRMIESGIRPKMDTYVMLLRKFGRWGFLRPVFVVW 385

Query: 403 NKMEELGCSPDESAYNSLIDALVEKGMIDMARKYDEEMVAKGLSPKLREELGTKMVNGG 453
            KMEELGCSPDE AYN+L+DAL++KGM+DMARKYDEEM AKGLS K REELGTK+V GG
Sbjct: 386 KKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEMFAKGLSAKPREELGTKLVQGG 442

The following BLAST results are available for this feature:
BLAST of Carg09606 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022953157.13.2e-20498.48pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita ... [more]
XP_023547614.14.1e-20498.48pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita ... [more]
XP_022991827.11.1e-20197.83pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita ... [more]
XP_022148858.14.6e-17989.59pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Momordica ... [more]
XP_008461152.12.8e-17688.94PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial ... [more]
BLAST of Carg09606 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80550.11.8e-10868.14Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G15200.11.4e-2041.86Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G15010.11.4e-2031.75Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G71060.11.1e-1234.55Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G65820.11.8e-1226.74Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg09606 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M8M3|PP136_ARATH3.2e-10768.14Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidop... [more]
sp|Q9LIL5|PP233_ARATH2.5e-1941.86Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis th... [more]
sp|Q9LFQ4|PP383_ARATH2.5e-1931.75Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop... [more]
sp|Q9C9A2|PP112_ARATH1.9e-1134.55Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
sp|Q9FH87|PP447_ARATH3.3e-1126.74Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
BLAST of Carg09606 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFA1|A0A1S3CFA1_CUCME1.8e-17688.94pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucumis ... [more]
tr|A0A0A0KBR1|A0A0A0KBR1_CUCSA5.0e-17488.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432170 PE=4 SV=1[more]
tr|A0A2P5AEN8|A0A2P5AEN8_9ROSA1.4e-12873.86Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=... [more]
tr|A0A2P5BS69|A0A2P5BS69_PARAD5.4e-12877.67Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_214690 P... [more]
tr|A0A2H5NQ53|A0A2H5NQ53_CITUN4.8e-12476.13Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_065730 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09606-RACarg09606-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 262..351
e-value: 1.9E-26
score: 94.5
coord: 53..185
e-value: 4.6E-16
score: 60.7
coord: 352..446
e-value: 6.1E-18
score: 66.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 186..261
e-value: 2.2E-10
score: 42.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 255..315
e-value: 2.3E-15
score: 56.3
coord: 357..416
e-value: 1.5E-4
score: 21.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 94..121
e-value: 0.79
score: 10.0
coord: 202..229
e-value: 0.009
score: 16.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 200..231
e-value: 3.1E-4
score: 18.7
coord: 304..338
e-value: 2.2E-10
score: 38.0
coord: 269..303
e-value: 2.6E-5
score: 22.1
coord: 407..438
e-value: 5.0E-5
score: 21.2
coord: 235..268
e-value: 1.1E-4
score: 20.1
coord: 372..405
e-value: 2.6E-4
score: 19.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 302..336
score: 12.573
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 342..368
score: 5.152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 369..403
score: 8.616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 10.918
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 11.203
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 91..125
score: 7.881
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 9.262
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 127..161
score: 7.235
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 404..438
score: 11.652
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 55..450
NoneNo IPR availablePANTHERPTHR24015:SF812SUBFAMILY NOT NAMEDcoord: 55..450

Synteny