Carg09601 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09601
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	calcineurin subunit B
Location	Cucurbita_argyrosperma_scaffold_029 : 1014070 .. 1016161 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGGTTCCATTTCTATATATGATGTGAGTAAGTAGAAGAAACCGCTCATTATCAGGTCAGCTGTGGTTTTCAGGTCTGTTCTTCTTTCCCCTTTCACCATTTTTGTCGCAGTTTTCTATCCGTTTGAAGCTTCATTGTTTGAATTTCAGTCGATCCATTAAATTTGAGGTTCTTACTTGTTCTATTCCGACTCTCTCTGTATTTGATCACTGATTTGGTTGAGCGGTTTTTATGAGGGTTTTCCGATTTCAGAAGTTCGATTCCTTAGTATCATTTAGAAATTGGGCAAGAATTCATGGGGAATACCTCGTCGATGCTCACTCAATATGATATTGAAGAAGTTCAAGAGCACTGCAATAAGCTTTGTAGGTTAATCTATACTTGTCTTGATTGGTTTATTTGTTTGTGGTTTGGTTGGCTTACTTTTTGCTGTGTTTAAGTTAGTCTCCCAACAGGAAATAGTGTCATTGTTTCAGAAATTCTGCCAGCTTGATAGAAATTCCAAGGGGTTTATTTCAGCTGATGAGTTCCTTTCAGTTCCTGAATTTGCTATGAATCCACTTCCTCAGGTATTGTTTTGAAATTGAATATAAACATTGTGTGTTTGTGTGTTGATTGTATGAGTTGCGACTTATGGCAAGCGATTTCTTTGTTTTACTCTGTTGTTATCTTCAGCGTCTGCTCAAGATGGTTGATGGTTTGAATTTTAAGGATTTTGTGGCTTTCTTGTCAGCATTCAGTGCTAAAGCTAGTTTGCACCATAAGATTGAATGTAAGTGCATGTTTTGCTACTGATTGTTCATCTTTTGCTGGTTTTGATCAGGCTTGAGGGTTTTGGTTGAAAATCAATGCTTATTTAAAACATTAGGGATCCTTAGCAATCATTCTTATGGTAGTAGTAAGTGGCACATCGTTTTTTATGAAATCCCACGTTGGTTGGAGAGGGAAAAAAAACATTTCTTAGGGTGTGAAAACCTCTCCCTAGTACACGCGTTTGACGGCTATACGTAATGAGCTAAAGTGAACAATATCTACTAGTGATGGACTTGTGCGGTTGCAAATGGTATCAGAGGCAGACATTGAACGTGTGTTAACAAGGACACTAGGCCCACAGAGGGTGGATTGTTAGATCCCACGTTCTTGCAGAAGGAACGAAGCATTCCTTATAAGGGTGTTGAAACCCCTCTCTAGCAGACGTGTTTTAAAATTGTGAGACGACAGCGATACATAACGGGCTAAAACTGACAATATCCGCTAGTGGTGGGCTTGGACTTGACTGTTACATTTTTACTCAAAAGTCATCTAACTTTTTGGTTGTCTTCCTCAATTATTGGAGCAAATTTGTCACAAGAAGCCGACTTATAAGTTAGAATTCATGATATCTAGAACGGTATGGCATGAATCATCACTAAACCAAAAGATATCATGAATTATAAGTTCAGGACTAAATGGAAAAACTTTTTGTCCTGAACTGACATTAATACATGATATTGACTCTAAGAAAACTACTTTGAGATGGTTCATTTCGTATTAATAATTGCTAGTGTCTCCTTATTTCAGTTATTTTCAAGCTATATGATGTTGACTGCAACGGGAAGGTGTCTTTCAACGACATCATTGAAGTGCTTGGGGATTCGTCTAATTCATTCATCTCCGACGAGCAGAGAGAGGCATGGCGTCTTCTTTCCTTTCGTTCGATATTTCGCATCTGTGTTGCTTGTTCGATATTTCGCATCTGTGTTGCTTCTCCAATTCATCGTTATCTGAAAACGCAATGTGATTCATTTAGTATCAAATACATAGCATATAAATCCTCGGAAAGAGACACCAATCCATGCATACAGTTACTTGATGCATCTCCTTGATGATGATATGTCTGCTCGTGCATAGGCATTGAGAGTATTTACGTAGCTCGAAAGGAACATATTTAGTCCAGTCCTAACACATGAAGTGGAATAACTACATTTTCTTTGTGCTCATATTATTTCTTTCACCTTCATAAACGAACTATTATTAGTTTCTCTTTCCCATTGCAGCAAGTATTGTGCCAATTGTTACAAGAAGCAGGCTATACAAGAAACTCTCTCTTGA

mRNA sequence

GATGGTTCCATTTCTATATATGATGTGAGTAAGTAGAAGAAACCGCTCATTATCAGGTCAGCTGTGGTTTTCAGGTCTGTTCTTCTTTCCCCTTTCACCATTTTTGTCGCAGTTTTCTATCCGTTTGAAGCTTCATTGTTTGAATTTCAGTCGATCCATTAAATTTGAGGTTCTTACTTGTTCTATTCCGACTCTCTCTGTATTTGATCACTGATTTGGTTGAGCGGTTTTTATGAGGGTTTTCCGATTTCAGAAGTTCGATTCCTTAGTATCATTTAGAAATTGGGCAAGAATTCATGGGGAATACCTCGTCGATGCTCACTCAATATGATATTGAAGAAGTTCAAGAGCACTGCAATAAGCTTTTTAGTCTCCCAACAGGAAATAGTGTCATTGTTTCAGAAATTCTGCCAGCTTGATAGAAATTCCAAGGGGTTTATTTCAGCTGATGAGTTCCTTTCAGTTCCTGAATTTGCTATGAATCCACTTCCTCAGCGTCTGCTCAAGATGGTTGATGGTTTGAATTTTAAGGATTTTGTGGCTTTCTTGTCAGCATTCAGTGCTAAAGCTAGTTTGCACCATAAGATTGAATTTATTTTCAAGCTATATGATGTTGACTGCAACGGGAAGGTGTCTTTCAACGACATCATTGAAGTGCTTGGGGATTCCAAGTATTGTGCCAATTGTTACAAGAAGCAGGCTATACAAGAAACTCTCTCTTGA

Coding sequence (CDS)

ATGATATTGAAGAAGTTCAAGAGCACTGCAATAAGCTTTTTAGTCTCCCAACAGGAAATAGTGTCATTGTTTCAGAAATTCTGCCAGCTTGATAGAAATTCCAAGGGGTTTATTTCAGCTGATGAGTTCCTTTCAGTTCCTGAATTTGCTATGAATCCACTTCCTCAGCGTCTGCTCAAGATGGTTGATGGTTTGAATTTTAAGGATTTTGTGGCTTTCTTGTCAGCATTCAGTGCTAAAGCTAGTTTGCACCATAAGATTGAATTTATTTTCAAGCTATATGATGTTGACTGCAACGGGAAGGTGTCTTTCAACGACATCATTGAAGTGCTTGGGGATTCCAAGTATTGTGCCAATTGTTACAAGAAGCAGGCTATACAAGAAACTCTCTCTTGA

Protein sequence

MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDSKYCANCYKKQAIQETLS

Homology

[Close]

BLAST of Carg09601 vs. NCBI nr
Match: XP_022953695.1 (calcineurin subunit B-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 226.1 bits (575), Expect = 6.9e-56
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLK 60
           MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLK
Sbjct: 1   MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLK 60

Query: 61  MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS 115
           MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS
Sbjct: 61  MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS 114

[Close]

BLAST of Carg09601 vs. NCBI nr
Match: XP_023548811.1 (calcineurin subunit B-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 1.3e-54
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 1   MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLK 60
           MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFL+VPEFAMNPL QRLLK
Sbjct: 9   MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLAVPEFAMNPLSQRLLK 68

Query: 61  MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS 115
           MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS
Sbjct: 69  MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS 122

[Close]

BLAST of Carg09601 vs. NCBI nr
Match: XP_022991501.1 (calcineurin subunit B-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 216.5 bits (550), Expect = 5.5e-53
Identity = 113/132 (85.61%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLK 60
           MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPL QRLLK
Sbjct: 9   MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLSQRLLK 68

Query: 61  MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD--SKYCA 120
           MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCN KVSFN IIEVLGD  S + +
Sbjct: 69  MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNRKVSFNHIIEVLGDLSSSFIS 128

Query: 121 NCYKKQAIQETL 131
           +  ++Q + + L
Sbjct: 129 DEEREQVLCQLL 140

[Close]

BLAST of Carg09601 vs. NCBI nr
Match: XP_022953696.1 (calcineurin subunit B-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 14  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF 73
           L SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF
Sbjct: 23  LFSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF 82

Query: 74  LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS 115
           LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS
Sbjct: 83  LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS 123

[Close]

BLAST of Carg09601 vs. NCBI nr
Match: XP_022953693.1 (calcineurin subunit B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 14  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF 73
           L SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF
Sbjct: 23  LFSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF 82

Query: 74  LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS 115
           LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS
Sbjct: 83  LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGDS 123

[Close]

BLAST of Carg09601 vs. TAIR10
Match: AT3G18430.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 172.2 bits (435), Expect = 2.2e-43
Identity = 85/119 (71.43%), Postives = 100/119 (84.03%), Query Frame = 0


Query: 14  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF 73
           L  QQEI+SL+Q+FCQLDRN+KGFISADEFLSVPEFAMNPL QRLLKMVDGLNFKDFVAF
Sbjct: 23  LFEQQEILSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAF 82

Query: 74  LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD--SKYCANCYKKQAIQETL 131
           LSAFSAKASL  K++ IFK+YD DCNGKVSF DI+EVL D    + ++  ++Q + + L
Sbjct: 83  LSAFSAKASLRQKVQLIFKVYDSDCNGKVSFKDIMEVLRDLSGSFMSDEQREQVLSQVL 141

[Close]

BLAST of Carg09601 vs. TAIR10
Match: AT4G17615.1 (calcineurin B-like protein 1)

HSP 1 Score: 52.4 bits (124), Expect = 2.5e-07
Identity = 34/106 (32.08%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 16  SQQEIVSLFQKFCQLDRN--SKGFISADEF---LSVPEFAMNPLPQRLLKMVD-----GL 75
           S  E+ +LF+ F  +  +    G I+ +EF   L       N    R+  M D      +
Sbjct: 28  SVSEVEALFELFKSISSSVVDDGLINKEEFQLALFKSRKRENIFANRIFDMFDVKRKGVI 87

Query: 76  NFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL 112
           +F DFV  L+ F   ASL  KI+F F+LYD+DC G +   ++ ++L
Sbjct: 88  DFGDFVRSLNVFHPNASLEDKIDFTFRLYDMDCTGYIERQEVKQML 133

[Close]

BLAST of Carg09601 vs. TAIR10
Match: AT5G47100.1 (calcineurin B-like protein 9)

HSP 1 Score: 47.8 bits (112), Expect = 6.1e-06
Identity = 31/106 (29.25%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 16  SQQEIVSLFQKFCQLDRN--SKGFISADEF---LSVPEFAMNPLPQRLLKMVD-----GL 75
           S  E+ +L++ F  +  +    G I+ +EF   L       N    R+  + D      +
Sbjct: 28  SVSEVEALYELFKSISSSVVDDGLINKEEFQLALFKNRKKENLFANRIFDLFDVKRKGVI 87

Query: 76  NFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL 112
           +F DFV  L+ F   ASL  K +F F+LYD+DC G +   ++ ++L
Sbjct: 88  DFGDFVRSLNVFHPNASLEEKTDFTFRLYDMDCTGFIERQEVKQML 133

[Close]

BLAST of Carg09601 vs. TAIR10
Match: AT4G16350.1 (calcineurin B-like protein 6)

HSP 1 Score: 43.1 bits (100), Expect = 1.5e-04
Identity = 33/114 (28.95%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 7   KSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNP----LPQRLLKMV 66
           K  A   + +  EI +L++ F  + +N  G I  ++F  V  F MN        R+  + 
Sbjct: 32  KDVARGTVFTVNEIEALYELFKSISKN--GLIDKEQFQLV-LFKMNTTRSLFADRVFDLF 91

Query: 67  DG-----LNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL 112
           D      L+F+ F   LS F   A    KIEF FKLYD++  G +   ++ +++
Sbjct: 92  DTKNTGILDFEAFARSLSVFHPNAKFEDKIEFSFKLYDLNQQGYIKRQEVKQMV 142

[Close]

BLAST of Carg09601 vs. Swiss-Prot
Match: sp|P42322|CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi OX=5762 GN=CNB1 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.7e-18
Identity = 43/101 (42.57%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 16  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDF 75
           +Q+EI  L+++F +LD++  G IS DEFL +PE A+NPL +R++ + D      +NFK+F
Sbjct: 23  TQKEIKKLYKRFKKLDKDGNGTISKDEFLMIPELAVNPLVKRVISIFDENGDGSVNFKEF 82

Query: 76  VAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL 112
           +A LS F+A+     K+EF FK+YD+D +G +S  ++  VL
Sbjct: 83  IAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVL 123

[Close]

BLAST of Carg09601 vs. Swiss-Prot
Match: sp|Q55G87|CANB1_DICDI (Calcineurin subunit B type 1 OS=Dictyostelium discoideum OX=44689 GN=cnbA PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15
Identity = 36/101 (35.64%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 16  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDF 75
           S+ E+  L+++F  LD++  G ++ DEFLS+P+ A+NPL +R++++ D      + F +F
Sbjct: 23  SEAELKKLYRRFQMLDKDGSGTLTTDEFLSIPDLALNPLLERVIQIFDQNKDNEIEFFEF 82

Query: 76  VAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL 112
           V  L+  S K +   K++F+F++YD+DC+G +S  ++ +VL
Sbjct: 83  VGTLATLSHKGTKEDKLKFLFQIYDIDCDGFISNGELFQVL 123

[Close]

BLAST of Carg09601 vs. Swiss-Prot
Match: sp|P87072|CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cnb-1 PE=2 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 7.7e-14
Identity = 37/100 (37.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 17  QQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDFV 76
           ++E+  L ++F +LD+++ G I  +EFLS+P+ + NPL  R++ + D      ++F++FV
Sbjct: 20  REEVDRLRKRFMKLDKDNSGTIEREEFLSLPQISTNPLATRMIAIFDEDGGGDVDFQEFV 79

Query: 77  AFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL 112
           + LSAFS+K +   K+ F FK+YD+D +G +S  ++  VL
Sbjct: 80  SGLSAFSSKGNKEQKLRFAFKVYDIDRDGYISNGELFIVL 119

[Close]

BLAST of Carg09601 vs. Swiss-Prot
Match: sp|Q9UU93|CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cnb1 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-13
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 16  SQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVD-----GLNFKDF 75
           S +EI  + ++F ++D N  G I  +EFLS+P  A NPL  RL  +VD      ++F++F
Sbjct: 19  SNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLASRLFSVVDEDGGGDVDFQEF 78

Query: 76  VAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL 112
           +  LS FS   +   K++F FK+YD+D +G +S  ++  VL
Sbjct: 79  INSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVL 119

[Close]

BLAST of Carg09601 vs. Swiss-Prot
Match: sp|Q6FLU4|CANB_CANGA (Calcineurin subunit B OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=CNB1 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-13
Identity = 37/100 (37.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 17  QQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDG-----LNFKDFV 76
           + EI  L ++F +LDR+S G I  +EF+S+P  + NPL  R++++ D      ++F++F+
Sbjct: 20  RDEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSANPLAGRIMEVFDADNSGDVDFQEFI 79

Query: 77  AFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVL 112
             LS FS + S   K++F FK+YD+D +G +S  ++  VL
Sbjct: 80  TGLSIFSGRGSKDEKLKFAFKIYDIDKDGLISNGELFIVL 119

[Close]

BLAST of Carg09601 vs. TrEMBL
Match: tr|A0A1S3CEG8|A0A1S3CEG8_CUCME (calcineurin subunit B OS=Cucumis melo OX=3656 GN=LOC103499819 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.1e-44
Identity = 91/100 (91.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 14  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF 73
           L SQQEIVSL+Q+FCQLDRN+KGFISADEFLSVPEFAMNPL QRLLKMVDGLNFKDFVAF
Sbjct: 23  LFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAF 82

Query: 74  LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD 114
           LSAFSAKAS+HHKIEFIFK+YD DCNGKVSFNDIIEVL D
Sbjct: 83  LSAFSAKASVHHKIEFIFKVYDADCNGKVSFNDIIEVLRD 122

[Close]

BLAST of Carg09601 vs. TrEMBL
Match: tr|A0A0D2S055|A0A0D2S055_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G102200 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.0e-44
Identity = 94/132 (71.21%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLK 60
           MILKKFK+TA  ++VSQQEIVSL+Q+FCQLDRN+KGFISADEFLSVPEFAMNPL QRLLK
Sbjct: 1   MILKKFKNTARIYVVSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLK 60

Query: 61  MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD--SKYCA 120
           MVDGLNFKDFVAFLSAFSAKAS+  K++ IFK+YD D NGKVSFND++EVL D    + +
Sbjct: 61  MVDGLNFKDFVAFLSAFSAKASVQQKVKLIFKVYDSDGNGKVSFNDMLEVLRDLSGSFIS 120

Query: 121 NCYKKQAIQETL 131
           +  ++Q + + L
Sbjct: 121 DVQREQVLTQLL 132

[Close]

BLAST of Carg09601 vs. TrEMBL
Match: tr|A0A0A0KBS0|A0A0A0KBS0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432270 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.0e-44
Identity = 90/100 (90.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 14  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF 73
           L SQQEIVSL+Q+FCQLDRN+KGFISADEFLSVPEFAMNPL QRLLKMVDGLNFKDFVAF
Sbjct: 23  LFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLNFKDFVAF 82

Query: 74  LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD 114
           LSAFSAKAS+HHKIEFIFK+YD DCNGKVSFN+IIEVL D
Sbjct: 83  LSAFSAKASVHHKIEFIFKVYDADCNGKVSFNEIIEVLRD 122

[Close]

BLAST of Carg09601 vs. TrEMBL
Match: tr|A0A1U8PE35|A0A1U8PE35_GOSHI (calcineurin subunit B-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107957518 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43
Identity = 93/132 (70.45%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MILKKFKSTAISFLVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLK 60
           MILKKFK+TA  ++VS+QEIVSL+Q+FCQLDRN+KGFISADEFLSVPEFAMNPL QRLLK
Sbjct: 1   MILKKFKNTARIYVVSKQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLK 60

Query: 61  MVDGLNFKDFVAFLSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD--SKYCA 120
           MVDGLNFKDFVAFLSAFSAKAS+  K++ IFK+YD D NGKVSFND++EVL D    + +
Sbjct: 61  MVDGLNFKDFVAFLSAFSAKASVQQKVKLIFKVYDSDGNGKVSFNDMLEVLRDLSGSFIS 120

Query: 121 NCYKKQAIQETL 131
           +  ++Q + + L
Sbjct: 121 DVQREQVLTQLL 132

[Close]

BLAST of Carg09601 vs. TrEMBL
Match: tr|A0A2I4G7Q5|A0A2I4G7Q5_9ROSI (calcineurin subunit B-like OS=Juglans regia OX=51240 GN=LOC109005441 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.4e-41
Identity = 87/120 (72.50%), Postives = 104/120 (86.67%), Query Frame = 0


Query: 14  LVSQQEIVSLFQKFCQLDRNSKGFISADEFLSVPEFAMNPLPQRLLKMVDGLNFKDFVAF 73
           L SQQEIVSL+Q+FCQLDRN+KGFISADEFLSVPEF+MNPL QRLLKMVDGLNFKDFVAF
Sbjct: 23  LFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFSMNPLSQRLLKMVDGLNFKDFVAF 82

Query: 74  LSAFSAKASLHHKIEFIFKLYDVDCNGKVSFNDIIEVLGD--SKYCANCYKKQAIQETLS 132
           LSAFSAKA++ HKIEFIF++YD D NGKVSFNDI+EVL D    + ++  ++Q + + L+
Sbjct: 83  LSAFSAKATIQHKIEFIFRVYDSDSNGKVSFNDILEVLRDLSGSFLSDKQREQVLSQVLA 142

The following BLAST results are available for this feature:

BLAST of Carg09601 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953695.1	6.9e-56	100.00	calcineurin subunit B-like isoform X2 [Cucurbita moschata]	[more]
XP_023548811.1	1.3e-54	98.25	calcineurin subunit B-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022991501.1	5.5e-53	85.61	calcineurin subunit B-like isoform X2 [Cucurbita maxima]	[more]
XP_022953696.1	1.4e-48	99.01	calcineurin subunit B-like isoform X3 [Cucurbita moschata]	[more]
XP_022953693.1	1.4e-48	99.01	calcineurin subunit B-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg09601 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18430.1	2.2e-43	71.43	Calcium-binding EF-hand family protein	[more]
AT4G17615.1	2.5e-07	32.08	calcineurin B-like protein 1	[more]
AT5G47100.1	6.1e-06	29.25	calcineurin B-like protein 9	[more]
AT4G16350.1	1.5e-04	28.95	calcineurin B-like protein 6	[more]

BLAST of Carg09601 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P42322\|CANB1_NAEGR	6.7e-18	42.57	Calcineurin subunit B OS=Naegleria gruberi OX=5762 GN=CNB1 PE=3 SV=1	[more]
sp\|Q55G87\|CANB1_DICDI	1.8e-15	35.64	Calcineurin subunit B type 1 OS=Dictyostelium discoideum OX=44689 GN=cnbA PE=1 S...	[more]
sp\|P87072\|CANB_NEUCR	7.7e-14	37.00	Calcineurin subunit B OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS...	[more]
sp\|Q9UU93\|CANB_SCHPO	1.7e-13	37.62	Calcineurin subunit B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=...	[more]
sp\|Q6FLU4\|CANB_CANGA	2.9e-13	37.00	Calcineurin subunit B OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761...	[more]

BLAST of Carg09601 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CEG8\|A0A1S3CEG8_CUCME	3.1e-44	91.00	calcineurin subunit B OS=Cucumis melo OX=3656 GN=LOC103499819 PE=4 SV=1	[more]
tr\|A0A0D2S055\|A0A0D2S055_GOSRA	4.0e-44	71.21	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G102200 PE=4 ...	[more]
tr\|A0A0A0KBS0\|A0A0A0KBS0_CUCSA	9.0e-44	90.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432270 PE=4 SV=1	[more]
tr\|A0A1U8PE35\|A0A1U8PE35_GOSHI	1.2e-43	70.45	calcineurin subunit B-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107957...	[more]
tr\|A0A2I4G7Q5\|A0A2I4G7Q5_9ROSI	2.4e-41	72.50	calcineurin subunit B-like OS=Juglans regia OX=51240 GN=LOC109005441 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09601-RA	Carg09601-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 4..130 e-value: 8.4E-24 score: 86.0
None	No IPR available	PANTHER	PTHR23056	CALCINEURIN B	coord: 14..114
None	No IPR available	PANTHER	PTHR23056:SF52	CALCINEURIN B SUBUNIT PROTEIN PHOSPHATASE 2B REGULATORY SUBUNIT -LIKE PROTEIN	coord: 14..114
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 23..109 e-value: 2.0E-8 score: 34.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 18..53 score: 9.632
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 82..117 score: 11.305
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 95..107
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 14..112

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09601	Cla012742	Watermelon (97103) v1	carwmB1031
Carg09601	Cla015345	Watermelon (97103) v1	carwmB1028
Carg09601	Csa7G432270	Cucumber (Chinese Long) v2	carcuB1041
Carg09601	MELO3C023443	Melon (DHL92) v3.5.1	carmeB0996
Carg09601	ClCG09G003090	Watermelon (Charleston Gray)	carwcgB1001
Carg09601	CSPI07G20360	Wild cucumber (PI 183967)	carcpiB1064
Carg09601	Cucsa.105650	Cucumber (Gy14) v1	carcgyB1144
Carg09601	CmaCh14G013720	Cucurbita maxima (Rimu)	carcmaB1418
Carg09601	CmaCh08G006120	Cucurbita maxima (Rimu)	carcmaB1425
Carg09601	CmoCh08G006020	Cucurbita moschata (Rifu)	carcmoB1379
Carg09601	CmoCh17G008460	Cucurbita moschata (Rifu)	carcmoB1376
Carg09601	Lsi02G026930	Bottle gourd (USVL1VR-Ls)	carlsiB937
Carg09601	Cp4.1LG12g07510	Cucurbita pepo (Zucchini)	carcpeB1424
Carg09601	Cp4.1LG17g08760	Cucurbita pepo (Zucchini)	carcpeB1425
Carg09601	MELO3C023443.2	Melon (DHL92) v3.6.1	carmedB1008
Carg09601	CsaV3_7G032200	Cucumber (Chinese Long) v3	carcucB1074
Carg09601	Cla97C09G165320	Watermelon (97103) v2	carwmbB1089
Carg09601	Bhi09G000406	Wax gourd	carwgoB1203

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09601	Carg23134	Silver-seed gourd	carcarB170

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09601	Cucumber (Gy14) v2	carcgybB1011
Carg09601	Cucumber (Gy14) v1	carcgyB1145
Carg09601	Cucurbita maxima (Rimu)	carcmaB1419
Carg09601	Cucurbita maxima (Rimu)	carcmaB1421
Carg09601	Cucurbita pepo (Zucchini)	carcpeB1423
Carg09601	Wild cucumber (PI 183967)	carcpiB1060
Carg09601	Cucumber (Chinese Long) v2	carcuB1036
Carg09601	Cucumber (Chinese Long) v3	carcucB1070
Carg09601	Silver-seed gourd	carcarB530