Carg09554 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09554
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	D-glycerate 3-kinase, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_029 : 799934 .. 801945 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTCAGCTGCTATCTCAGACTTCAATTTTTTCCTCTGTTTTCTGTAGCAATAGTAATGGCGTTGGTTTTTATAAATTCCGCTCTTCCCCTCACGTCCATCATGTCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGCGATGGGTAAAACCGATCAGTCCATTTCTAGACTCTGTTATTTGGCGACCGATTTGGCGAAATCAGGTATTTTCTTCTCACGACTTAGTTTTGATGAAATACTATTGGTGATTATCAGGTTTTGTCTATTTGGTTCTGTCATATCCTCTGTTTGGCATCTTGGAATGGTTTCTGATGATGGTGAGGAGTAATTGGTTGTCGAATGTTAGGAAGGTTATGAAATGTTCTTCGATTTCGAATGCTGTGCTACTTTTAGGGAGGTTATTTTTATGCGTTTGGCTGTGCAATATTCTCTGTTAATATGGAGGGAAATTGTTGCGACATGTTCTTGGGAATTTGGTTTCATGATGCAAGAATGAAACGTTGTTTTTATTTTTCTGCAATATCATTTGGTTCTAGAAATGGATTCTGTCCATTCTTGGTGTTTGGATGTTTTTGGTTTCTAACGTATAGAGTAATCCCTTTTTCCTTTTATCTTTGTACTCATCAAACTTCGTTATACATTCATCATAGAGATATGACAATCTCTCTAGATTGAGCATTCTTTTTAGATCGTTCTGTTCATGCTTGGAACCTTGTTCCCTTCCGTTTAAGGGACATTCTTATATGAGACTTATGATAGGTAAAAGCATCATAAAATGTAACAGCCCAAGCCCACTGCTAATATTATTTGCTTTGATCCGTTACGTATTGCCGTCAGTCTCATGGTTTTAAAACGCGTATGCTAGGGAAAGATTTCCACACCTTTATAAAGAATGCTTTGTTCTCCTTCGTGAGATTTCACATAAATAGTTTGTAATTTATAGTGAGGTCAGAGAGAGCTAATTCTTGTATTTTATGATGAACTTTTCAATATTTGTAGTGAAGCTTCTATTTATAGTTTCAGAAAGCTGAAGTTCTATTGTTTGATGGCCAATGCTGTTCTACCGTATCTTGTATAGTGTGCTGCGTTCTTAATCATTGATCTCTTCCTTTTACTCTAGGCAATGGATGTTCATGGATTCAAGATAACTCCTCGGGTTGCAGCGTTGCTGCCTCCGACAAGTGTTATCAAGGCACCGTTTGTTATGCATTACCCATGAAACCAGCACAAGTTTCCACTGTGGAGGATCTTTTTGAATTCATATGCTCAGGTCCCTTGATAGAAAAGTTGGGTATGAGCCCTCAAAATGTAGCTGATGCCATAGATAAATGGCTGGCTTATGGTTCTTATCTTTGTCGATTGTTCAAGGTTAATGAAATGGAGCTCACAATTCCCCAGAAAGCAAGATTTTACCATTACTATATACCTGTGTTTTTTTGGTGTGAGGATCAAATATCTCAACACCATTCCTCATTTAAAGAAGAAGAAGAGATACCTCCCTTAGTGGTAAGCTTTAATCTCATTGCAAACCTGCTTATAATTATTATTTGATGTTCTTCCGCTTTGAGGAATTAAGATGTTTCGCACGAGGCTAAGCTTTCATGGACGTTCTTTACTCGTGGCCTATTAATTACGCTGGCTATTACTATCAGAGCTAAATTTTCTTTATTCCTCTGACTACTTGTCTTCAAACCACTTATTGGTGCTTGTGTAGATAGGATTTAGCGCTCCGCAAGGTTGTGGCAAGACGACACTCGTGTATGCTCTCAATTATCTTTTCGAAGTAACAGGCAGGTAGGCTGCGATGCTAGTAAATTTACCATAAAGAGAGCTGAGTATCTGCTGAAGCAGTGACTGAATTTCTGACTGAAGTTCTATCTCAGGAAGTCTGCTATGTTATCCATTGATGACTTCTATCTCACAGCTGAAGGGCAGGTTGGTTTGCCATCTATGATGTTGTTAGCATTTCCTTTCCGTTTGCAGAACTCTTAA

mRNA sequence

ATGGCAACTCAGCTGCTATCTCAGACTTCAATTTTTTCCTCTGTTTTCTGTAGCAATAGTAATGGCGTTGGTTTTTATAAATTCCGCTCTTCCCCTCACGTCCATCATGTCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGCGATGGGTAAAACCGATCAGTCCATTTCTAGACTCTGTTATTTGGCGACCGATTTGGCGAAATCAGGTATTTTCTTCTCACGACTTAGTTTTGATGAAATACTATTGGTGATTATCAGGTTTTGTCTATTTGGTTCTGTCATATCCTCTGTTTGGCATCTTGGAATGGTTTCTGATGATGGCAATGGATGTTCATGGATTCAAGATAACTCCTCGGGTTGCAGCGTTGCTGCCTCCGACAAGTGTTATCAAGGCACCGTTTGTTATGCATTACCCATGAAACCAGCACAAGTTTCCACTGTGGAGGATCTTTTTGAATTCATATGCTCAGGTCCCTTGATAGAAAAGTTGGGTATGAGCCCTCAAAATGTAGCTGATGCCATAGATAAATGGCTGGCTTATGGTTCTTATCTTTGTCGATTGTTCAAGGTTAATGAAATGGAGCTCACAATTCCCCAGAAAGCAAGATTTTACCATTACTATATACCTGTGTTTTTTTGGTGTGAGGATCAAATATCTCAACACCATTCCTCATTTAAAGAAGAAGAAGAGATACCTCCCTTAGTGATAGGATTTAGCGCTCCGCAAGGTTGTGGCAAGACGACACTCGTGTATGCTCTCAATTATCTTTTCGAAGTAACAGGCAGGAAGTCTGCTATGTTATCCATTGATGACTTCTATCTCACAGCTGAAGGGCAGGTTGGTTTGCCATCTATGATGTTGTTAGCATTTCCTTTCCGTTTGCAGAACTCTTAA

Coding sequence (CDS)

ATGGCAACTCAGCTGCTATCTCAGACTTCAATTTTTTCCTCTGTTTTCTGTAGCAATAGTAATGGCGTTGGTTTTTATAAATTCCGCTCTTCCCCTCACGTCCATCATGTCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGCGATGGGTAAAACCGATCAGTCCATTTCTAGACTCTGTTATTTGGCGACCGATTTGGCGAAATCAGGTATTTTCTTCTCACGACTTAGTTTTGATGAAATACTATTGGTGATTATCAGGTTTTGTCTATTTGGTTCTGTCATATCCTCTGTTTGGCATCTTGGAATGGTTTCTGATGATGGCAATGGATGTTCATGGATTCAAGATAACTCCTCGGGTTGCAGCGTTGCTGCCTCCGACAAGTGTTATCAAGGCACCGTTTGTTATGCATTACCCATGAAACCAGCACAAGTTTCCACTGTGGAGGATCTTTTTGAATTCATATGCTCAGGTCCCTTGATAGAAAAGTTGGGTATGAGCCCTCAAAATGTAGCTGATGCCATAGATAAATGGCTGGCTTATGGTTCTTATCTTTGTCGATTGTTCAAGGTTAATGAAATGGAGCTCACAATTCCCCAGAAAGCAAGATTTTACCATTACTATATACCTGTGTTTTTTTGGTGTGAGGATCAAATATCTCAACACCATTCCTCATTTAAAGAAGAAGAAGAGATACCTCCCTTAGTGATAGGATTTAGCGCTCCGCAAGGTTGTGGCAAGACGACACTCGTGTATGCTCTCAATTATCTTTTCGAAGTAACAGGCAGGAAGTCTGCTATGTTATCCATTGATGACTTCTATCTCACAGCTGAAGGGCAGGTTGGTTTGCCATCTATGATGTTGTTAGCATTTCCTTTCCGTTTGCAGAACTCTTAA

Protein sequence

MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQSISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQDNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPLVIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGLPSMMLLAFPFRLQNS

Homology

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BLAST of Carg09554 vs. NCBI nr
Match: XP_022954057.1 (D-glycerate 3-kinase, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 443.4 bits (1139), Expect = 6.4e-121
Identity = 228/288 (79.17%), Postives = 228/288 (79.17%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHXXXXXXXXXXXXXXXXXXXXMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPH                    MGKTDQS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPH--------VHHVSVSSSSFAMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 242

[Close]

BLAST of Carg09554 vs. NCBI nr
Match: XP_022954058.1 (D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 443.4 bits (1139), Expect = 6.4e-121
Identity = 228/288 (79.17%), Postives = 228/288 (79.17%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHXXXXXXXXXXXXXXXXXXXXMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPH                    MGKTDQS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPH--------VHHVSVSSSSFAMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 242

[Close]

BLAST of Carg09554 vs. NCBI nr
Match: XP_023549187.1 (D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 432.2 bits (1110), Expect = 1.5e-117
Identity = 239/288 (82.99%), Postives = 239/288 (82.99%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHXXXXXXXXXXXXXXXXXXXXMGKTDQS 60
           MATQLLSQTSI SSVFCSN NGVGFYKFRSSPH     XXXXXXXXXXXXXXXMGKTDQS
Sbjct: 1   MATQLLSQTSILSSVFCSNRNGVGFYKFRSSPH---VHXXXXXXXXXXXXXXXMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSG SVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGRSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHS FKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSLFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 247

[Close]

BLAST of Carg09554 vs. NCBI nr
Match: XP_023549186.1 (D-glycerate 3-kinase, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 432.2 bits (1110), Expect = 1.5e-117
Identity = 239/288 (82.99%), Postives = 239/288 (82.99%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHXXXXXXXXXXXXXXXXXXXXMGKTDQS 60
           MATQLLSQTSI SSVFCSN NGVGFYKFRSSPH     XXXXXXXXXXXXXXXMGKTDQS
Sbjct: 1   MATQLLSQTSILSSVFCSNRNGVGFYKFRSSPH---VHXXXXXXXXXXXXXXXMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSG SVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGRSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHS FKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSLFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 247

[Close]

BLAST of Carg09554 vs. NCBI nr
Match: XP_022992256.1 (D-glycerate 3-kinase, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 431.8 bits (1109), Expect = 1.9e-117
Identity = 223/288 (77.43%), Postives = 225/288 (78.12%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHXXXXXXXXXXXXXXXXXXXXMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPH                    MGKT+QS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPH-------IHHVSVSSSSSFAMGKTNQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLA DL KS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLAADLVKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSG SVAASD+CYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGRSVAASDECYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 243

[Close]

BLAST of Carg09554 vs. TAIR10
Match: AT1G80380.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 243.8 bits (621), Expect = 1.4e-64
Identity = 116/177 (65.54%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 115 GCSWIQDNSSGCSVAASDKCYQGTV--CYALP-MKPAQVSTVEDLFEFICSGPLIEKLGM 174
           GCSWIQDNS     A +     GT   C ALP      VS+V DLFEFICSGPL+ K+G+
Sbjct: 84  GCSWIQDNSMVHDYATTT---NGTSKRCSALPTTNTVDVSSVSDLFEFICSGPLVNKIGI 143

Query: 175 SPQNVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSF 234
           +PQ V  +IDKWL YGS LCRLF++NE++LTIPQKAR YHYYIPVF WCEDQI+ H+S F
Sbjct: 144 TPQRVGQSIDKWLLYGSQLCRLFQLNELKLTIPQKARLYHYYIPVFIWCEDQIALHNSKF 203

Query: 235 KEEEEIPPLVIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           K+ +++PPLVIGFSAPQGCGKTTLV+AL+YLF+ T +KSA +S+DDFYLTAEGQ  L
Sbjct: 204 KDGDDVPPLVIGFSAPQGCGKTTLVFALDYLFKTTKKKSATISVDDFYLTAEGQAEL 257

[Close]

BLAST of Carg09554 vs. Swiss-Prot
Match: sp|Q944I4|GLYK_ARATH (D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLYK PE=1 SV=2)

HSP 1 Score: 243.8 bits (621), Expect = 2.4e-63
Identity = 116/177 (65.54%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 115 GCSWIQDNSSGCSVAASDKCYQGTV--CYALP-MKPAQVSTVEDLFEFICSGPLIEKLGM 174
           GCSWIQDNS     A +     GT   C ALP      VS+V DLFEFICSGPL+ K+G+
Sbjct: 84  GCSWIQDNSMVHDYATTT---NGTSKRCSALPTTNTVDVSSVSDLFEFICSGPLVNKIGI 143

Query: 175 SPQNVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSF 234
           +PQ V  +IDKWL YGS LCRLF++NE++LTIPQKAR YHYYIPVF WCEDQI+ H+S F
Sbjct: 144 TPQRVGQSIDKWLLYGSQLCRLFQLNELKLTIPQKARLYHYYIPVFIWCEDQIALHNSKF 203

Query: 235 KEEEEIPPLVIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           K+ +++PPLVIGFSAPQGCGKTTLV+AL+YLF+ T +KSA +S+DDFYLTAEGQ  L
Sbjct: 204 KDGDDVPPLVIGFSAPQGCGKTTLVFALDYLFKTTKKKSATISVDDFYLTAEGQAEL 257

[Close]

BLAST of Carg09554 vs. TrEMBL
Match: tr|A0A0A0K6H4|A0A0A0K6H4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G435550 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 2.9e-101
Identity = 201/300 (67.00%), Postives = 214/300 (71.33%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHXXXXXXXXXXXXXXXXXXXXMGKTDQS 60
           MATQLLS T  F S+FCSNSNGVGFYKF SSP+                    M KT+QS
Sbjct: 1   MATQLLSPTITFPSLFCSNSNGVGFYKFHSSPY-------SHHVSVSSSSSFPMAKTNQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
            SRLCYL T L KS                                      GNGCSWIQ
Sbjct: 61  TSRLCYLQTHLPKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNS   +V+AS+ CY+G++CY+LP KPAQVSTVEDLFEFICSGPLIEKLG+SP++VADAI
Sbjct: 121 DNSLFHNVSASE-CYRGSICYSLPTKPAQVSTVEDLFEFICSGPLIEKLGLSPESVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFK NEMELTIPQKARFYHYYIPVFFWCEDQISQH SSFKE EEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKANEMELTIPQKARFYHYYIPVFFWCEDQISQHQSSFKEGEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL----PSMMLLAF 297
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L    P   LL F
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQAQLRERNPGNALLEF 254

[Close]

BLAST of Carg09554 vs. TrEMBL
Match: tr|A0A1S3CDU9|A0A1S3CDU9_CUCME (D-glycerate 3-kinase, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499753 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.4e-100
Identity = 198/288 (68.75%), Postives = 209/288 (72.57%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHXXXXXXXXXXXXXXXXXXXXMGKTDQS 60
           MATQ LS TS F S+FCSNSNGVGFYKFRSS +                    M KT+QS
Sbjct: 1   MATQPLSSTSTFPSLFCSNSNGVGFYKFRSSLY--------SHHVSVSSSSLPMAKTNQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYL T L KS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLQTHLPKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNS   SV+AS + Y+G+VCY+LP KPAQVSTV DLFEFICSGPLIEKLG+SP++VADAI
Sbjct: 121 DNSLCHSVSASVEGYRGSVCYSLPTKPAQVSTVADLFEFICSGPLIEKLGLSPESVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFK NEMELTIPQKARFYHYYIPVFFWCEDQISQH SSFKE EEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKANEMELTIPQKARFYHYYIPVFFWCEDQISQHQSSFKEGEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQAQL 242

[Close]

BLAST of Carg09554 vs. TrEMBL
Match: tr|A0A1S3CDU8|A0A1S3CDU8_CUCME (D-glycerate 3-kinase, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499753 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.4e-100
Identity = 198/288 (68.75%), Postives = 209/288 (72.57%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHXXXXXXXXXXXXXXXXXXXXMGKTDQS 60
           MATQ LS TS F S+FCSNSNGVGFYKFRSS +                    M KT+QS
Sbjct: 1   MATQPLSSTSTFPSLFCSNSNGVGFYKFRSSLY--------SHHVSVSSSSLPMAKTNQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYL T L KS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLQTHLPKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNS   SV+AS + Y+G+VCY+LP KPAQVSTV DLFEFICSGPLIEKLG+SP++VADAI
Sbjct: 121 DNSLCHSVSASVEGYRGSVCYSLPTKPAQVSTVADLFEFICSGPLIEKLGLSPESVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFK NEMELTIPQKARFYHYYIPVFFWCEDQISQH SSFKE EEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKANEMELTIPQKARFYHYYIPVFFWCEDQISQHQSSFKEGEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQAQL 242

[Close]

BLAST of Carg09554 vs. TrEMBL
Match: tr|A0A2I4GUI4|A0A2I4GUI4_9ROSI (D-glycerate 3-kinase, chloroplastic OS=Juglans regia OX=51240 GN=LOC109011010 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.0e-71
Identity = 127/186 (68.28%), Postives = 155/186 (83.33%), Query Frame = 0


Query: 115 GCSWIQDNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQ 174
           GCSW+Q+NS+  + AA + C QG +    P KPA VS+V+DLFEFICSGPLIEK+G++P+
Sbjct: 67  GCSWMQNNSTCHNTAAGNDCRQGELYSVFPSKPAAVSSVQDLFEFICSGPLIEKMGLTPE 126

Query: 175 NVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEE 234
            ++++IDKWLAYG+ LCRLF++NE+ LT+PQKARFYHYYIPVF WCEDQISQH S FK+ 
Sbjct: 127 KISESIDKWLAYGTQLCRLFQLNELYLTVPQKARFYHYYIPVFLWCEDQISQHRSMFKDG 186

Query: 235 EEIPPLVIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL----PS 294
           E+IPPLVIGFSAPQGCGKTTLV+AL+YLF+VTGRKSA +SIDDFYLTAEGQ  +    P 
Sbjct: 187 EDIPPLVIGFSAPQGCGKTTLVFALDYLFQVTGRKSATISIDDFYLTAEGQAKMREENPG 246

Query: 295 MMLLAF 297
             LL F
Sbjct: 247 NALLEF 252

[Close]

BLAST of Carg09554 vs. TrEMBL
Match: tr|A0A2P4LMX9|A0A2P4LMX9_QUESU (D-glycerate 3-kinase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_59334 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.6e-70
Identity = 123/181 (67.96%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 109 VSDDGNGCSWIQDNSSGCSVAASDKCYQGTVCYAL-PMKPAQVSTVEDLFEFICSGPLIE 168
           +S  G+GCSWIQDNS+ C+ AAS+ C +    Y++ P KPA+VS+V+DLFEFICSGPL  
Sbjct: 5   LSKSGHGCSWIQDNSTCCNTAASNDCSRLGPSYSVFPTKPAEVSSVQDLFEFICSGPLFN 64

Query: 169 KLGMSPQNVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQH 228
           KLG++P+ VA+++DKWL YGS+LCRLF++NE+ LT+P+KAR YHYY+PVF WCEDQISQH
Sbjct: 65  KLGLTPEKVAESVDKWLEYGSHLCRLFQLNELYLTVPEKARLYHYYVPVFLWCEDQISQH 124

Query: 229 HSSFKEEEEIPPLVIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVG 288
            S+FK+ E+I PLVIGFSAPQGCGKTTLV+AL YLF++TGRK+A +SIDDFYLTAEGQ  
Sbjct: 125 RSTFKDGEDISPLVIGFSAPQGCGKTTLVFALEYLFQITGRKAATVSIDDFYLTAEGQAK 184

The following BLAST results are available for this feature:

BLAST of Carg09554 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954057.1	6.4e-121	79.17	D-glycerate 3-kinase, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_022954058.1	6.4e-121	79.17	D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita moschata]	[more]
XP_023549187.1	1.5e-117	82.99	D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023549186.1	1.5e-117	82.99	D-glycerate 3-kinase, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022992256.1	1.9e-117	77.43	D-glycerate 3-kinase, chloroplastic isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg09554 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80380.2	1.4e-64	65.54	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

BLAST of Carg09554 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q944I4\|GLYK_ARATH	2.4e-63	65.54	D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLYK PE=1...	[more]

BLAST of Carg09554 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K6H4\|A0A0A0K6H4_CUCSA	2.9e-101	67.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G435550 PE=4 SV=1	[more]
tr\|A0A1S3CDU9\|A0A1S3CDU9_CUCME	1.4e-100	68.75	D-glycerate 3-kinase, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1S3CDU8\|A0A1S3CDU8_CUCME	1.4e-100	68.75	D-glycerate 3-kinase, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A2I4GUI4\|A0A2I4GUI4_9ROSI	9.0e-71	68.28	D-glycerate 3-kinase, chloroplastic OS=Juglans regia OX=51240 GN=LOC109011010 PE...	[more]
tr\|A0A2P4LMX9\|A0A2P4LMX9_QUESU	2.6e-70	67.96	D-glycerate 3-kinase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_59334 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09554-RA	Carg09554-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 192..294 e-value: 8.4E-14 score: 53.3
None	No IPR available	PANTHER	PTHR10285:SF6	ATP-DEPENDENT KINASE TDA10-RELATED	coord: 228..289
None	No IPR available	PANTHER	PTHR10285	URIDINE KINASE	coord: 228..289
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 238..285

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09554	Cucurbita moschata (Rifu)	carcmoB1374
Carg09554	Cucurbita moschata (Rifu)	carcmoB1375
Carg09554	Cucurbita moschata (Rifu)	carcmoB1376
Carg09554	Cucurbita moschata (Rifu)	carcmoB1377
Carg09554	Cucurbita moschata (Rifu)	carcmoB1378
Carg09554	Cucurbita moschata (Rifu)	carcmoB1379
Carg09554	Cucurbita pepo (Zucchini)	carcpeB1424
Carg09554	Cucurbita pepo (Zucchini)	carcpeB1425
Carg09554	Cucurbita pepo (Zucchini)	carcpeB1426
Carg09554	Cucurbita pepo (Zucchini)	carcpeB1429
Carg09554	Wild cucumber (PI 183967)	carcpiB1064
Carg09554	Cucumber (Chinese Long) v2	carcuB1041
Carg09554	Cucumber (Chinese Long) v3	carcucB1074
Carg09554	Bottle gourd (USVL1VR-Ls)	carlsiB937
Carg09554	Bottle gourd (USVL1VR-Ls)	carlsiB939
Carg09554	Melon (DHL92) v3.5.1	carmeB0996
Carg09554	Melon (DHL92) v3.6.1	carmedB1008
Carg09554	Melon (DHL92) v3.6.1	carmedB1009
Carg09554	Watermelon (Charleston Gray)	carwcgB1001
Carg09554	Watermelon (Charleston Gray)	carwcgB1004
Carg09554	Watermelon (97103) v1	carwmB1028
Carg09554	Watermelon (97103) v1	carwmB1031
Carg09554	Watermelon (97103) v2	carwmbB1088
Carg09554	Watermelon (97103) v2	carwmbB1089
Carg09554	Wax gourd	carwgoB1204
Carg09554	Silver-seed gourd	carcarB047
Carg09554	Silver-seed gourd	carcarB169
Carg09554	Silver-seed gourd	carcarB240
Carg09554	Silver-seed gourd	carcarB596
Carg09554	Cucumber (Gy14) v2	carcgybB1011
Carg09554	Cucumber (Gy14) v1	carcgyB1143
Carg09554	Cucurbita maxima (Rimu)	carcmaB1422
Carg09554	Cucurbita maxima (Rimu)	carcmaB1418
Carg09554	Cucurbita maxima (Rimu)	carcmaB1419
Carg09554	Cucurbita maxima (Rimu)	carcmaB1420
Carg09554	Cucurbita maxima (Rimu)	carcmaB1424